BLASTX nr result

ID: Zingiber24_contig00004530 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00004530
         (421 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006648224.1| PREDICTED: ATP-dependent helicase BRM-like [...    55   1e-05
dbj|BAD07923.1| SNF2 domain/helicase domain-containing protein-l...    55   1e-05
ref|NP_001045665.2| Os02g0114000 [Oryza sativa Japonica Group] g...    55   1e-05
gb|EEC72341.1| hypothetical protein OsI_05562 [Oryza sativa Indi...    55   1e-05

>ref|XP_006648224.1| PREDICTED: ATP-dependent helicase BRM-like [Oryza brachyantha]
          Length = 2201

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 28/65 (43%), Positives = 37/65 (56%)
 Frame = +1

Query: 7    RNSTLSIPRNSNSSLQAKHTSSLPHREMQRPNDRNRVSCSIADIQWAKPVKRMRTDSGKR 186
            R +     R+ + S Q+ H++      +Q+ +     S  I DIQWAKP KR RTDSGKR
Sbjct: 2137 RGARTPFQRDPHPSQQSMHSAGWGAHSVQQSDRGGSSSPGIGDIQWAKPAKRSRTDSGKR 2196

Query: 187  RPSQM 201
            RPS M
Sbjct: 2197 RPSHM 2201


>dbj|BAD07923.1| SNF2 domain/helicase domain-containing protein-like [Oryza sativa
            Japonica Group] gi|41052776|dbj|BAD07645.1| SNF2
            domain/helicase domain-containing protein-like [Oryza
            sativa Japonica Group] gi|222622037|gb|EEE56169.1|
            hypothetical protein OsJ_05089 [Oryza sativa Japonica
            Group]
          Length = 2200

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 28/65 (43%), Positives = 37/65 (56%)
 Frame = +1

Query: 7    RNSTLSIPRNSNSSLQAKHTSSLPHREMQRPNDRNRVSCSIADIQWAKPVKRMRTDSGKR 186
            R +     R+ + S Q+ H++      +Q+ +     S  I DIQWAKP KR RTDSGKR
Sbjct: 2136 RGARTPFQRDPHPSQQSMHSAGWGAHSVQQSDRGGSSSPGIGDIQWAKPTKRSRTDSGKR 2195

Query: 187  RPSQM 201
            RPS M
Sbjct: 2196 RPSHM 2200


>ref|NP_001045665.2| Os02g0114000 [Oryza sativa Japonica Group]
           gi|255670545|dbj|BAF07579.2| Os02g0114000, partial
           [Oryza sativa Japonica Group]
          Length = 320

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 28/65 (43%), Positives = 37/65 (56%)
 Frame = +1

Query: 7   RNSTLSIPRNSNSSLQAKHTSSLPHREMQRPNDRNRVSCSIADIQWAKPVKRMRTDSGKR 186
           R +     R+ + S Q+ H++      +Q+ +     S  I DIQWAKP KR RTDSGKR
Sbjct: 256 RGARTPFQRDPHPSQQSMHSAGWGAHSVQQSDRGGSSSPGIGDIQWAKPTKRSRTDSGKR 315

Query: 187 RPSQM 201
           RPS M
Sbjct: 316 RPSHM 320


>gb|EEC72341.1| hypothetical protein OsI_05562 [Oryza sativa Indica Group]
          Length = 2184

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 28/65 (43%), Positives = 37/65 (56%)
 Frame = +1

Query: 7    RNSTLSIPRNSNSSLQAKHTSSLPHREMQRPNDRNRVSCSIADIQWAKPVKRMRTDSGKR 186
            R +     R+ + S Q+ H++      +Q+ +     S  I DIQWAKP KR RTDSGKR
Sbjct: 2120 RGARTPFQRDPHPSQQSMHSAGWGAHSVQQSDRGGSSSPGIGDIQWAKPTKRSRTDSGKR 2179

Query: 187  RPSQM 201
            RPS M
Sbjct: 2180 RPSHM 2184


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