BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00004487
         (845 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006661902.1| PREDICTED: KH domain-containing protein At4g...   253   5e-65
ref|XP_003633728.1| PREDICTED: KH domain-containing protein At4g...   251   2e-64
emb|CAN72739.1| hypothetical protein VITISV_027256 [Vitis vinifera]   251   2e-64
ref|XP_006482257.1| PREDICTED: KH domain-containing protein At4g...   251   3e-64
ref|XP_006430782.1| hypothetical protein CICLE_v10011187mg [Citr...   251   3e-64
ref|XP_006430781.1| hypothetical protein CICLE_v10011187mg [Citr...   251   3e-64
gb|AEV43362.1| poly C-binding protein [Citrus sinensis]               249   7e-64
gb|AAP54423.2| KH domain containing protein, expressed [Oryza sa...   246   1e-62
ref|NP_001064947.1| Os10g0495000 [Oryza sativa Japonica Group] g...   246   1e-62
ref|XP_003574121.1| PREDICTED: KH domain-containing protein At4g...   246   1e-62
gb|EAY79054.1| hypothetical protein OsI_34164 [Oryza sativa Indi...   246   1e-62
ref|XP_004982741.1| PREDICTED: KH domain-containing protein At4g...   242   1e-61
ref|XP_004982740.1| PREDICTED: KH domain-containing protein At4g...   242   1e-61
ref|XP_004982739.1| PREDICTED: KH domain-containing protein At4g...   242   1e-61
gb|EOY04206.1| RNA-binding KH domain-containing protein isoform ...   239   7e-61
gb|EOY04205.1| RNA-binding KH domain-containing protein isoform ...   239   7e-61
gb|EOY04203.1| RNA-binding KH domain-containing protein isoform ...   239   7e-61
gb|EOY04202.1| RNA-binding KH domain-containing protein isoform ...   239   7e-61
ref|XP_002516721.1| Poly(rC)-binding protein, putative [Ricinus ...   236   1e-59
gb|EMT12700.1| KH domain-containing protein [Aegilops tauschii]       235   1e-59

>ref|XP_006661902.1| PREDICTED: KH domain-containing protein At4g18375-like [Oryza
           brachyantha]
          Length = 773

 Score =  253 bits (647), Expect = 5e-65
 Identities = 142/282 (50%), Positives = 188/282 (66%), Gaps = 1/282 (0%)
 Frame = +1

Query: 1   QDALLKIHDRIAADEILRGGVVQERTESDDIVTARILVPKNQVGCLLGKGGNIIQQLRTN 180
           QDALLKIHD+IA DE L GG+  E++E+ D VTARILVP NQVGCLLGKGG+IIQQLR  
Sbjct: 126 QDALLKIHDKIAEDEDLHGGIDHEKSETVDGVTARILVPGNQVGCLLGKGGSIIQQLRNE 185

Query: 181 TGANIRILPPDHLPPCAMGSDELVQVSGVPSIAKKALYRISALLHQHPNKENPSLEDIIY 360
           TGA IR+LP ++LP CA+ SDELVQ+SG PS+ +KALY IS  LHQHP K+NP LE+II 
Sbjct: 186 TGAGIRVLPSENLPQCALKSDELVQISGAPSLVRKALYEISTRLHQHPRKDNPPLEEIID 245

Query: 361 ASTRGSYRSDSSIPAPLPQGNRVWSPYYSDVRDPSTVSRFNRYPDEPSRYPSGSFSRNSF 540
           AST+  ++S    P  LP  N +    + D      +   + Y + P RY +G       
Sbjct: 246 ASTQRKHQS----PPQLPHANPMLPHLHVD--HSPQIPLLDPYRNGPLRYHAGE------ 293

Query: 541 QEGEMAEEFSMRILCAXXXXXXXXXXXXXNIRQLEQQTGARIQVEDTAPDAE-ERVINIS 717
                AEEFS++ILCA             N+RQ+EQQTGARIQV++   +A  ER+I +S
Sbjct: 294 -----AEEFSIKILCASEHIGQVIGKSGGNVRQVEQQTGARIQVKEVGKNASGERLIVVS 348

Query: 718 CKEVPWETRSPTIEAALQIQNKTSSNSDDDAITTRLLVPSSK 843
            +E+P +  SPTIEA + + +K S+ +++  +TTRL+VPS+K
Sbjct: 349 SQEIPDDPVSPTIEALILLHSKVSAPAENRHLTTRLVVPSNK 390



 Score = 71.6 bits (174), Expect = 3e-10
 Identities = 39/113 (34%), Positives = 64/113 (56%)
 Frame = +1

Query: 4   DALLKIHDRIAADEILRGGVVQERTESDDIVTARILVPKNQVGCLLGKGGNIIQQLRTNT 183
           +AL+ +H +++A    R             +T R++VP N+VGC+LG+GG +I ++R  T
Sbjct: 362 EALILLHSKVSAPAENRH------------LTTRLVVPSNKVGCILGEGGKVITEMRRRT 409

Query: 184 GANIRILPPDHLPPCAMGSDELVQVSGVPSIAKKALYRISALLHQHPNKENPS 342
           GA IR+      P      +ELVQV+G+P+IA+ AL  I++ L     ++  S
Sbjct: 410 GAEIRVYSKADKPKYLSFDEELVQVAGLPAIARGALTEIASRLRTRTLRDGSS 462


>ref|XP_003633728.1| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
           vinifera] gi|296087281|emb|CBI33655.3| unnamed protein
           product [Vitis vinifera]
          Length = 676

 Score =  251 bits (641), Expect = 2e-64
 Identities = 134/281 (47%), Positives = 178/281 (63%)
 Frame = +1

Query: 1   QDALLKIHDRIAADEILRGGVVQERTESDDIVTARILVPKNQVGCLLGKGGNIIQQLRTN 180
           QDAL+K+H+RI  +++  GG   E    + +VTAR+LVP N VGCLLGK G++IQ+LR+ 
Sbjct: 127 QDALMKVHERIIEEDLF-GGTEFEDDNENTVVTARLLVPNNMVGCLLGKRGDVIQRLRSE 185

Query: 181 TGANIRILPPDHLPPCAMGSDELVQVSGVPSIAKKALYRISALLHQHPNKENPSLEDIIY 360
           TGANIR+LP +HLP CAM SDELVQ+SG P++AKKALY +S LLHQ+P K+ P     + 
Sbjct: 186 TGANIRVLPAEHLPTCAMSSDELVQISGKPAVAKKALYEVSTLLHQNPRKDKPPSSFPMS 245

Query: 361 ASTRGSYRSDSSIPAPLPQGNRVWSPYYSDVRDPSTVSRFNRYPDEPSRYPSGSFSRNSF 540
              +G +   +S+    P GN +WS   S+ +    +     Y  +PS  P G    ++ 
Sbjct: 246 FGGQGFHPPGASMGNMPPPGNPMWSNRNSNSQGVPPMPWMGGYRSQPSVVPGGFDGVHAG 305

Query: 541 QEGEMAEEFSMRILCAXXXXXXXXXXXXXNIRQLEQQTGARIQVEDTAPDAEERVINISC 720
             GE + EFSM+ILC              N++QL+Q+TGA I VED   ++EERVI +S 
Sbjct: 306 HGGEASGEFSMKILCPAGKIGGVIGKGGFNVKQLQQETGASIHVEDALAESEERVIRVSS 365

Query: 721 KEVPWETRSPTIEAALQIQNKTSSNSDDDAITTRLLVPSSK 843
            E  W  RS TIEA LQ+QNKTS  SD   +TTRLLVPSSK
Sbjct: 366 FEALWNPRSQTIEAILQLQNKTSEYSDKGGMTTRLLVPSSK 406



 Score = 77.8 bits (190), Expect = 5e-12
 Identities = 57/213 (26%), Positives = 98/213 (46%), Gaps = 6/213 (2%)
 Frame = +1

Query: 94  VTARILVPKNQVGCLLGKGGNIIQQLRTNTGANIRILPPDHLPPCAMGSDELVQVSGVPS 273
           +T R+LVP ++VGC+LG+GG++I ++R  T A+IR+   +  P CA   +ELVQ+SG   
Sbjct: 396 MTTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVYSKEDKPKCASDDEELVQISGNFG 455

Query: 274 IAKKALYRISALLHQHPNKE-NPSLEDIIYASTRGSYRSDSSIPAPLPQGNRVWSPYYSD 450
           +AK AL  I++ L     ++ N  +E        G +     +P  LP  +       S 
Sbjct: 456 VAKDALAEIASRLRVRCLRDANGGVEPAPVGPVPG-FGHPGKLPGGLPSSSGALGAGSSG 514

Query: 451 VRDPSTVSRFNRYPDEPSRYP-----SGSFSRNSFQEGEMAEEFSMRILCAXXXXXXXXX 615
             +   +S+      EP  YP     +G  + NS  E ++       ++           
Sbjct: 515 GFE---LSKGGGLEYEPQSYPVPPAATGYHNVNSSMESKIPNNSVSSVI----------G 561

Query: 616 XXXXNIRQLEQQTGARIQVEDTAPDAEERVINI 714
               N+  + +  GAR++++D      E V+ I
Sbjct: 562 MGGGNVANMSEMAGARVKLQDPQSGGSECVVEI 594


>emb|CAN72739.1| hypothetical protein VITISV_027256 [Vitis vinifera]
          Length = 668

 Score =  251 bits (641), Expect = 2e-64
 Identities = 134/281 (47%), Positives = 178/281 (63%)
 Frame = +1

Query: 1   QDALLKIHDRIAADEILRGGVVQERTESDDIVTARILVPKNQVGCLLGKGGNIIQQLRTN 180
           QDAL+K+H+RI  +++  GG   E    + +VTAR+LVP N VGCLLGK G++IQ+LR+ 
Sbjct: 155 QDALMKVHERIIEEDLF-GGTEFEDDNENTVVTARLLVPNNMVGCLLGKRGDVIQRLRSE 213

Query: 181 TGANIRILPPDHLPPCAMGSDELVQVSGVPSIAKKALYRISALLHQHPNKENPSLEDIIY 360
           TGANIR+LP +HLP CAM SDELVQ+SG P++AKKALY +S LLHQ+P K+ P     + 
Sbjct: 214 TGANIRVLPAEHLPTCAMSSDELVQISGKPAVAKKALYEVSTLLHQNPRKDKPPSSFPMS 273

Query: 361 ASTRGSYRSDSSIPAPLPQGNRVWSPYYSDVRDPSTVSRFNRYPDEPSRYPSGSFSRNSF 540
              +G +   +S+    P GN +WS   S+ +    +     Y  +PS  P G    ++ 
Sbjct: 274 FGGQGFHPPGASMGNMPPPGNPMWSNRNSNSQGVPPMPWMGGYRSQPSVVPGGFDGVHAG 333

Query: 541 QEGEMAEEFSMRILCAXXXXXXXXXXXXXNIRQLEQQTGARIQVEDTAPDAEERVINISC 720
             GE + EFSM+ILC              N++QL+Q+TGA I VED   ++EERVI +S 
Sbjct: 334 HGGEASGEFSMKILCPAGKIGGVIGKGGFNVKQLQQETGASIHVEDALAESEERVIRVSS 393

Query: 721 KEVPWETRSPTIEAALQIQNKTSSNSDDDAITTRLLVPSSK 843
            E  W  RS TIEA LQ+QNKTS  SD   +TTRLLVPSSK
Sbjct: 394 FEALWNPRSQTIEAILQLQNKTSEYSDKGGMTTRLLVPSSK 434



 Score = 77.8 bits (190), Expect = 5e-12
 Identities = 57/213 (26%), Positives = 98/213 (46%), Gaps = 6/213 (2%)
 Frame = +1

Query: 94   VTARILVPKNQVGCLLGKGGNIIQQLRTNTGANIRILPPDHLPPCAMGSDELVQVSGVPS 273
            +T R+LVP ++VGC+LG+GG++I ++R  T A+IR+   +  P CA   +ELVQ+SG   
Sbjct: 424  MTTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVYSKEDKPKCASDDEELVQISGNFG 483

Query: 274  IAKKALYRISALLHQHPNKE-NPSLEDIIYASTRGSYRSDSSIPAPLPQGNRVWSPYYSD 450
            +AK AL  I++ L     ++ N  +E        G +     +P  LP  +       S 
Sbjct: 484  VAKDALAEIASRLRVRCLRDANGGVEPAPVGPVPG-FGHPGKLPGGLPSSSGALGAGSSG 542

Query: 451  VRDPSTVSRFNRYPDEPSRYP-----SGSFSRNSFQEGEMAEEFSMRILCAXXXXXXXXX 615
              +   +S+      EP  YP     +G  + NS  E ++       ++           
Sbjct: 543  GFE---LSKGGGLEYEPQSYPVPPAATGYHNVNSSMESKIPNNSVSSVI----------G 589

Query: 616  XXXXNIRQLEQQTGARIQVEDTAPDAEERVINI 714
                N+  + +  GAR++++D      E V+ I
Sbjct: 590  MGGGNVANMSEMAGARVKLQDPQSGGSECVVEI 622


>ref|XP_006482257.1| PREDICTED: KH domain-containing protein At4g18375 [Citrus sinensis]
          Length = 715

 Score =  251 bits (640), Expect = 3e-64
 Identities = 140/286 (48%), Positives = 181/286 (63%), Gaps = 5/286 (1%)
 Frame = +1

Query: 1   QDALLKIHDRIAADEILRGGVVQERTESDDIVTARILVPKNQVGCLLGKGGNIIQQLRTN 180
           QDALLK+HDRI  +++  GG+  +    +  VTAR+LVP N VGCLLGK G++IQ+LR+ 
Sbjct: 129 QDALLKVHDRIIEEDLF-GGMASDDDNENSTVTARLLVPNNMVGCLLGKRGDVIQRLRSE 187

Query: 181 TGANIRILPPDHLPPCAMGSDELVQVSGVPSIAKKALYRISALLHQHPNKENPSLEDIIY 360
           TGANIR+LP D LPPCAM +DELVQ+SG P++AK+ALY +S LLHQ+P K+ P      +
Sbjct: 188 TGANIRVLPADRLPPCAMNTDELVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSS---F 244

Query: 361 ASTRGSYRSDSSIPAPL----PQGNRVWSPYYSDVRDPSTVSRFNRYPDEPSRYPSGSF- 525
               G  ++  S PAP+    P GN  W    S +    +      Y D+PSR  SGS  
Sbjct: 245 PQAYGG-QNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSIN 303

Query: 526 SRNSFQEGEMAEEFSMRILCAXXXXXXXXXXXXXNIRQLEQQTGARIQVEDTAPDAEERV 705
           S    Q GE++ EFSM+ILC+             N++QL+Q+TGA I VED   D++ERV
Sbjct: 304 SCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERV 363

Query: 706 INISCKEVPWETRSPTIEAALQIQNKTSSNSDDDAITTRLLVPSSK 843
           I  S  E  W  RS TI+A LQ+QNKTS  S+   ITTRLLVPSSK
Sbjct: 364 IRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSK 409



 Score = 77.8 bits (190), Expect = 5e-12
 Identities = 62/215 (28%), Positives = 96/215 (44%), Gaps = 8/215 (3%)
 Frame = +1

Query: 94   VTARILVPKNQVGCLLGKGGNIIQQLRTNTGANIRILPPDHLPPCAMGSDELVQVSGVPS 273
            +T R+LVP ++VGC+LG+GG++I ++R  T A+IR+   D  P CA   +ELVQ+SG   
Sbjct: 399  ITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVYSKDDKPKCASEDEELVQISGNFG 458

Query: 274  IAKKALYRISALLH------QHPNKENPSLEDIIYASTRGSYRSDSSIPAPLPQGNRVWS 435
            +AK AL  I++ L        +   E   +  +      G   S   +P+  P G  + S
Sbjct: 459  VAKDALTEIASRLRARTLRDANVGAEPAPVGPVQLVGAAGGLPSRGPLPSG-PVGAGI-S 516

Query: 436  PYYSDVRDPSTVSRFNRYPDEPSRYPSGSFSRNSFQEG--EMAEEFSMRILCAXXXXXXX 609
              Y   R          Y  EP  YP    +      G   M   F  RI          
Sbjct: 517  GGYEPFR--------GGYDYEPQSYPPPPSAPPPSATGYPNMNSAFEARI--PNKAVGSV 566

Query: 610  XXXXXXNIRQLEQQTGARIQVEDTAPDAEERVINI 714
                  NI  + +  GAR++++D  P + E +++I
Sbjct: 567  MGTGGSNIPNVGEVVGARVKLQDPHPGSSECIVDI 601


>ref|XP_006430782.1| hypothetical protein CICLE_v10011187mg [Citrus clementina]
           gi|557532839|gb|ESR44022.1| hypothetical protein
           CICLE_v10011187mg [Citrus clementina]
          Length = 528

 Score =  251 bits (640), Expect = 3e-64
 Identities = 140/286 (48%), Positives = 181/286 (63%), Gaps = 5/286 (1%)
 Frame = +1

Query: 1   QDALLKIHDRIAADEILRGGVVQERTESDDIVTARILVPKNQVGCLLGKGGNIIQQLRTN 180
           QDALLK+HDRI  +++  GG+  +    +  VTAR+LVP N VGCLLGK G++IQ+LR+ 
Sbjct: 129 QDALLKVHDRIIEEDLF-GGMASDDDNENSTVTARLLVPNNMVGCLLGKRGDVIQRLRSE 187

Query: 181 TGANIRILPPDHLPPCAMGSDELVQVSGVPSIAKKALYRISALLHQHPNKENPSLEDIIY 360
           TGANIR+LP D LPPCAM +DELVQ+SG P++AK+ALY +S LLHQ+P K+ P      +
Sbjct: 188 TGANIRVLPADRLPPCAMNTDELVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSS---F 244

Query: 361 ASTRGSYRSDSSIPAPL----PQGNRVWSPYYSDVRDPSTVSRFNRYPDEPSRYPSGSF- 525
               G  ++  S PAP+    P GN  W    S +    +      Y D+PSR  SGS  
Sbjct: 245 PQAYGG-QNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSIN 303

Query: 526 SRNSFQEGEMAEEFSMRILCAXXXXXXXXXXXXXNIRQLEQQTGARIQVEDTAPDAEERV 705
           S    Q GE++ EFSM+ILC+             N++QL+Q+TGA I VED   D++ERV
Sbjct: 304 SCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERV 363

Query: 706 INISCKEVPWETRSPTIEAALQIQNKTSSNSDDDAITTRLLVPSSK 843
           I  S  E  W  RS TI+A LQ+QNKTS  S+   ITTRLLVPSSK
Sbjct: 364 IRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSK 409



 Score = 73.6 bits (179), Expect = 9e-11
 Identities = 34/73 (46%), Positives = 51/73 (69%)
 Frame = +1

Query: 94  VTARILVPKNQVGCLLGKGGNIIQQLRTNTGANIRILPPDHLPPCAMGSDELVQVSGVPS 273
           +T R+LVP ++VGC+LG+GG++I ++R  T A+IR+   D  P CA   +ELVQ+SG   
Sbjct: 399 ITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVYSKDDKPKCASEDEELVQISGNFG 458

Query: 274 IAKKALYRISALL 312
           +AK AL  I++ L
Sbjct: 459 VAKDALTEIASRL 471


>ref|XP_006430781.1| hypothetical protein CICLE_v10011187mg [Citrus clementina]
           gi|557532838|gb|ESR44021.1| hypothetical protein
           CICLE_v10011187mg [Citrus clementina]
          Length = 710

 Score =  251 bits (640), Expect = 3e-64
 Identities = 140/286 (48%), Positives = 181/286 (63%), Gaps = 5/286 (1%)
 Frame = +1

Query: 1   QDALLKIHDRIAADEILRGGVVQERTESDDIVTARILVPKNQVGCLLGKGGNIIQQLRTN 180
           QDALLK+HDRI  +++  GG+  +    +  VTAR+LVP N VGCLLGK G++IQ+LR+ 
Sbjct: 129 QDALLKVHDRIIEEDLF-GGMASDDDNENSTVTARLLVPNNMVGCLLGKRGDVIQRLRSE 187

Query: 181 TGANIRILPPDHLPPCAMGSDELVQVSGVPSIAKKALYRISALLHQHPNKENPSLEDIIY 360
           TGANIR+LP D LPPCAM +DELVQ+SG P++AK+ALY +S LLHQ+P K+ P      +
Sbjct: 188 TGANIRVLPADRLPPCAMNTDELVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSS---F 244

Query: 361 ASTRGSYRSDSSIPAPL----PQGNRVWSPYYSDVRDPSTVSRFNRYPDEPSRYPSGSF- 525
               G  ++  S PAP+    P GN  W    S +    +      Y D+PSR  SGS  
Sbjct: 245 PQAYGG-QNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSIN 303

Query: 526 SRNSFQEGEMAEEFSMRILCAXXXXXXXXXXXXXNIRQLEQQTGARIQVEDTAPDAEERV 705
           S    Q GE++ EFSM+ILC+             N++QL+Q+TGA I VED   D++ERV
Sbjct: 304 SCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERV 363

Query: 706 INISCKEVPWETRSPTIEAALQIQNKTSSNSDDDAITTRLLVPSSK 843
           I  S  E  W  RS TI+A LQ+QNKTS  S+   ITTRLLVPSSK
Sbjct: 364 IRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSK 409



 Score = 77.4 bits (189), Expect = 6e-12
 Identities = 61/213 (28%), Positives = 96/213 (45%), Gaps = 6/213 (2%)
 Frame = +1

Query: 94  VTARILVPKNQVGCLLGKGGNIIQQLRTNTGANIRILPPDHLPPCAMGSDELVQVSGVPS 273
           +T R+LVP ++VGC+LG+GG++I ++R  T A+IR+   D  P CA   +ELVQ+SG   
Sbjct: 399 ITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVYSKDDKPKCASEDEELVQISGNFG 458

Query: 274 IAKKALYRISALLH------QHPNKENPSLEDIIYASTRGSYRSDSSIPAPLPQGNRVWS 435
           +AK AL  I++ L        +   E   +  +      G   S   +P+  P G  + S
Sbjct: 459 VAKDALTEIASRLRARTLRDANVGAEPAPVGPVQLVGAAGGLPSRGPLPSG-PVGAGI-S 516

Query: 436 PYYSDVRDPSTVSRFNRYPDEPSRYPSGSFSRNSFQEGEMAEEFSMRILCAXXXXXXXXX 615
             Y   R          Y  EP  YP      ++     M   F  RI            
Sbjct: 517 GGYEPFR--------GGYDYEPQSYPP---PPSAMGYPNMNSAFEARI--PNKAVGSVMG 563

Query: 616 XXXXNIRQLEQQTGARIQVEDTAPDAEERVINI 714
               NI  + +  GAR++++D  P + E +++I
Sbjct: 564 TGGSNIPNVGEVAGARVKLQDPHPGSSECIVDI 596


>gb|AEV43362.1| poly C-binding protein [Citrus sinensis]
          Length = 569

 Score =  249 bits (637), Expect = 7e-64
 Identities = 138/286 (48%), Positives = 181/286 (63%), Gaps = 5/286 (1%)
 Frame = +1

Query: 1   QDALLKIHDRIAADEILRGGVVQERTESDDIVTARILVPKNQVGCLLGKGGNIIQQLRTN 180
           QDALLK+HDRI  +++  GG+  +    +  +TAR+LVP N VGCLLGK G++IQ+LR+ 
Sbjct: 129 QDALLKVHDRIIEEDLF-GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSE 187

Query: 181 TGANIRILPPDHLPPCAMGSDELVQVSGVPSIAKKALYRISALLHQHPNKENPSLEDIIY 360
           TGANIR+LP D LPPCAM +DE+VQ+SG P++AK+ALY +S LLHQ+P K+ P      +
Sbjct: 188 TGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSS---F 244

Query: 361 ASTRGSYRSDSSIPAPL----PQGNRVWSPYYSDVRDPSTVSRFNRYPDEPSRYPSGSF- 525
               G  ++  S PAP+    P GN  W    S +    +      Y D+PSR  SGS  
Sbjct: 245 PQAYGG-QNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSIN 303

Query: 526 SRNSFQEGEMAEEFSMRILCAXXXXXXXXXXXXXNIRQLEQQTGARIQVEDTAPDAEERV 705
           S    Q GE++ EFSM+ILC+             N++QL+Q+TGA I VED   D++ERV
Sbjct: 304 SCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERV 363

Query: 706 INISCKEVPWETRSPTIEAALQIQNKTSSNSDDDAITTRLLVPSSK 843
           I  S  E  W  RS TI+A LQ+QNKTS  S+   ITTRLLVPSSK
Sbjct: 364 IRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSK 409


>gb|AAP54423.2| KH domain containing protein, expressed [Oryza sativa Japonica
           Group]
          Length = 677

 Score =  246 bits (627), Expect = 1e-62
 Identities = 138/282 (48%), Positives = 187/282 (66%), Gaps = 1/282 (0%)
 Frame = +1

Query: 1   QDALLKIHDRIAADEILRGGVVQERTESDDIVTARILVPKNQVGCLLGKGGNIIQQLRTN 180
           QDALLKIHD+IAADE L  G+V E++E+ D V ARILVP NQVGCLLGKGG+IIQQLR +
Sbjct: 124 QDALLKIHDKIAADEDLHAGIVHEKSENVDDVIARILVPGNQVGCLLGKGGSIIQQLRND 183

Query: 181 TGANIRILPPDHLPPCAMGSDELVQVSGVPSIAKKALYRISALLHQHPNKENPSLEDIIY 360
           TGA IR+LP ++LP CA+ SDELVQ+SG  S+ +KALY IS  LHQHP K+NP LE+II 
Sbjct: 184 TGAGIRVLPSENLPQCALKSDELVQISGSSSLVRKALYEISTRLHQHPRKDNPPLEEIID 243

Query: 361 ASTRGSYRSDSSIPAPLPQGNRVWSPYYSDVRDPSTVSRFNRYPDEPSRYPSGSFSRNSF 540
           AST+  +++    P  LP  N +    + D      +   + Y + P +Y S        
Sbjct: 244 ASTQRKHQA----PPQLPHANPMLPHLHVD--HSPQIPLLDPYRNRPLQYHSAE------ 291

Query: 541 QEGEMAEEFSMRILCAXXXXXXXXXXXXXNIRQLEQQTGARIQVEDTAPDA-EERVINIS 717
                AEEFS++ILCA             N+RQ+EQQTGA +QV++   +A EER+I +S
Sbjct: 292 -----AEEFSIKILCASEHIGQVIGKSGGNVRQVEQQTGACVQVKEVGKNASEERLIVVS 346

Query: 718 CKEVPWETRSPTIEAALQIQNKTSSNSDDDAITTRLLVPSSK 843
            +E+P +  SPTIEA + + +K S+ +++  +TTRL+VPS+K
Sbjct: 347 SQEIPDDPVSPTIEALILLHSKVSTLAENHHLTTRLVVPSNK 388



 Score = 70.1 bits (170), Expect = 9e-10
 Identities = 33/83 (39%), Positives = 53/83 (63%)
 Frame = +1

Query: 94  VTARILVPKNQVGCLLGKGGNIIQQLRTNTGANIRILPPDHLPPCAMGSDELVQVSGVPS 273
           +T R++VP N+VGC++G+GG +I ++R  TGA IR+      P      +ELVQV+G+P+
Sbjct: 378 LTTRLVVPSNKVGCIIGEGGKVITEMRRRTGAEIRVYSKADKPKYLSFDEELVQVAGLPA 437

Query: 274 IAKKALYRISALLHQHPNKENPS 342
           IA+ AL  I++ L     ++  S
Sbjct: 438 IARGALTEIASRLRTRTLRDGSS 460


>ref|NP_001064947.1| Os10g0495000 [Oryza sativa Japonica Group]
           gi|22128716|gb|AAM92828.1| putative RNA-binding protein
           [Oryza sativa Japonica Group]
           gi|110289325|gb|ABB47821.2| KH domain containing
           protein, expressed [Oryza sativa Japonica Group]
           gi|113639556|dbj|BAF26861.1| Os10g0495000 [Oryza sativa
           Japonica Group] gi|215694845|dbj|BAG90036.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 762

 Score =  246 bits (627), Expect = 1e-62
 Identities = 138/282 (48%), Positives = 187/282 (66%), Gaps = 1/282 (0%)
 Frame = +1

Query: 1   QDALLKIHDRIAADEILRGGVVQERTESDDIVTARILVPKNQVGCLLGKGGNIIQQLRTN 180
           QDALLKIHD+IAADE L  G+V E++E+ D V ARILVP NQVGCLLGKGG+IIQQLR +
Sbjct: 124 QDALLKIHDKIAADEDLHAGIVHEKSENVDDVIARILVPGNQVGCLLGKGGSIIQQLRND 183

Query: 181 TGANIRILPPDHLPPCAMGSDELVQVSGVPSIAKKALYRISALLHQHPNKENPSLEDIIY 360
           TGA IR+LP ++LP CA+ SDELVQ+SG  S+ +KALY IS  LHQHP K+NP LE+II 
Sbjct: 184 TGAGIRVLPSENLPQCALKSDELVQISGSSSLVRKALYEISTRLHQHPRKDNPPLEEIID 243

Query: 361 ASTRGSYRSDSSIPAPLPQGNRVWSPYYSDVRDPSTVSRFNRYPDEPSRYPSGSFSRNSF 540
           AST+  +++    P  LP  N +    + D      +   + Y + P +Y S        
Sbjct: 244 ASTQRKHQA----PPQLPHANPMLPHLHVD--HSPQIPLLDPYRNRPLQYHSAE------ 291

Query: 541 QEGEMAEEFSMRILCAXXXXXXXXXXXXXNIRQLEQQTGARIQVEDTAPDA-EERVINIS 717
                AEEFS++ILCA             N+RQ+EQQTGA +QV++   +A EER+I +S
Sbjct: 292 -----AEEFSIKILCASEHIGQVIGKSGGNVRQVEQQTGACVQVKEVGKNASEERLIVVS 346

Query: 718 CKEVPWETRSPTIEAALQIQNKTSSNSDDDAITTRLLVPSSK 843
            +E+P +  SPTIEA + + +K S+ +++  +TTRL+VPS+K
Sbjct: 347 SQEIPDDPVSPTIEALILLHSKVSTLAENHHLTTRLVVPSNK 388



 Score = 70.1 bits (170), Expect = 9e-10
 Identities = 33/83 (39%), Positives = 53/83 (63%)
 Frame = +1

Query: 94  VTARILVPKNQVGCLLGKGGNIIQQLRTNTGANIRILPPDHLPPCAMGSDELVQVSGVPS 273
           +T R++VP N+VGC++G+GG +I ++R  TGA IR+      P      +ELVQV+G+P+
Sbjct: 378 LTTRLVVPSNKVGCIIGEGGKVITEMRRRTGAEIRVYSKADKPKYLSFDEELVQVAGLPA 437

Query: 274 IAKKALYRISALLHQHPNKENPS 342
           IA+ AL  I++ L     ++  S
Sbjct: 438 IARGALTEIASRLRTRTLRDGSS 460


>ref|XP_003574121.1| PREDICTED: KH domain-containing protein At4g18375-like
           [Brachypodium distachyon]
          Length = 777

 Score =  246 bits (627), Expect = 1e-62
 Identities = 145/282 (51%), Positives = 180/282 (63%), Gaps = 1/282 (0%)
 Frame = +1

Query: 1   QDALLKIHDRIAADEILRGGVVQERTESDDIVTARILVPKNQVGCLLGKGGNIIQQLRTN 180
           QDALLKIHD+I+  E    G + E++E+   VTARILVP NQVGCLLGKGG+IIQQLR +
Sbjct: 128 QDALLKIHDKISTHEDPHDGAIHEKSETAADVTARILVPGNQVGCLLGKGGSIIQQLRND 187

Query: 181 TGANIRILPPDHLPPCAMGSDELVQVSGVPSIAKKALYRISALLHQHPNKENPSLEDIIY 360
           TGA IRILP   LP CA+ SDELVQ+SG PS+ +KALY IS  LHQHP KENP LE+II 
Sbjct: 188 TGAGIRILPSQDLPQCALQSDELVQISGAPSLVRKALYEISTRLHQHPRKENPPLEEIID 247

Query: 361 ASTRGSYRSDSSIPAPLPQGNRVWSPYYSDVRDPSTVSRFNRYPDEPSRYPSGSFSRNSF 540
           AST+    S    P PLP  N +  PY    R P  +   + Y   PS+YP         
Sbjct: 248 ASTQRKRES----PPPLPHEN-LMLPYQHVDRLP-PMPLLDPYRSRPSQYPVPE------ 295

Query: 541 QEGEMAEEFSMRILCAXXXXXXXXXXXXXNIRQLEQQTGARIQVEDTAPDAE-ERVINIS 717
                AEEFS+RILCA             N+RQ+EQQTGARI V++   DA  ER+I +S
Sbjct: 296 -----AEEFSVRILCASELIGPVIGKSGANVRQVEQQTGARILVQELDKDASGERLIVLS 350

Query: 718 CKEVPWETRSPTIEAALQIQNKTSSNSDDDAITTRLLVPSSK 843
            KE+P +  SP IEA + + +K S++S+   + TRL+VPSSK
Sbjct: 351 SKEIPGDPVSPAIEALILLHSKVSASSEKRHLITRLVVPSSK 392



 Score = 68.6 bits (166), Expect = 3e-09
 Identities = 49/172 (28%), Positives = 83/172 (48%), Gaps = 1/172 (0%)
 Frame = +1

Query: 4   DALLKIHDRIAADEILRGGVVQERTESDDIVTARILVPKNQVGCLLGKGGNIIQQLRTNT 183
           +AL+ +H +++A            +E   ++T R++VP ++VGC+LG+GG +I ++R   
Sbjct: 364 EALILLHSKVSAS-----------SEKRHLIT-RLVVPSSKVGCILGEGGKVITEMRRRI 411

Query: 184 GANIRILPPDHLPPCAMGSDELVQVSGVPSIAKKALYRISALLHQHPNKENPSLEDIIYA 363
           GA IR+      P      +ELVQV+G P IA+ AL  I++ L     ++  S  + +  
Sbjct: 412 GAEIRVYSKADKPKYLSFDEELVQVAGPPDIARDALTEIASRLRTRTLRDGGSGNNPLPL 471

Query: 364 STRGSYRSDSSIPAPLPQGNRVWSPYYSDVRDPSTVSRFNRYP-DEPSRYPS 516
           +     R D        Q  R  +P Y     P+  S + R   D+P   P+
Sbjct: 472 APSDGPRGDIFPSREFTQNGRPANPPYG---RPANDSPYRRLAIDQPYGRPA 520


>gb|EAY79054.1| hypothetical protein OsI_34164 [Oryza sativa Indica Group]
           gi|125575260|gb|EAZ16544.1| hypothetical protein
           OsJ_32017 [Oryza sativa Japonica Group]
          Length = 769

 Score =  246 bits (627), Expect = 1e-62
 Identities = 138/282 (48%), Positives = 187/282 (66%), Gaps = 1/282 (0%)
 Frame = +1

Query: 1   QDALLKIHDRIAADEILRGGVVQERTESDDIVTARILVPKNQVGCLLGKGGNIIQQLRTN 180
           QDALLKIHD+IAADE L  G+V E++E+ D V ARILVP NQVGCLLGKGG+IIQQLR +
Sbjct: 131 QDALLKIHDKIAADEDLHAGIVHEKSENVDDVIARILVPGNQVGCLLGKGGSIIQQLRND 190

Query: 181 TGANIRILPPDHLPPCAMGSDELVQVSGVPSIAKKALYRISALLHQHPNKENPSLEDIIY 360
           TGA IR+LP ++LP CA+ SDELVQ+SG  S+ +KALY IS  LHQHP K+NP LE+II 
Sbjct: 191 TGAGIRVLPSENLPQCALKSDELVQISGSSSLVRKALYEISTRLHQHPRKDNPPLEEIID 250

Query: 361 ASTRGSYRSDSSIPAPLPQGNRVWSPYYSDVRDPSTVSRFNRYPDEPSRYPSGSFSRNSF 540
           AST+  +++    P  LP  N +    + D      +   + Y + P +Y S        
Sbjct: 251 ASTQRKHQA----PPQLPHANPMLPHLHVD--HSPQIPLLDPYRNRPLQYHSAE------ 298

Query: 541 QEGEMAEEFSMRILCAXXXXXXXXXXXXXNIRQLEQQTGARIQVEDTAPDA-EERVINIS 717
                AEEFS++ILCA             N+RQ+EQQTGA +QV++   +A EER+I +S
Sbjct: 299 -----AEEFSIKILCASEHIGQVIGKSGGNVRQVEQQTGACVQVKEVGKNASEERLIVVS 353

Query: 718 CKEVPWETRSPTIEAALQIQNKTSSNSDDDAITTRLLVPSSK 843
            +E+P +  SPTIEA + + +K S+ +++  +TTRL+VPS+K
Sbjct: 354 SQEIPDDPVSPTIEALILLHSKVSTLAENHHLTTRLVVPSNK 395



 Score = 70.1 bits (170), Expect = 9e-10
 Identities = 33/83 (39%), Positives = 53/83 (63%)
 Frame = +1

Query: 94  VTARILVPKNQVGCLLGKGGNIIQQLRTNTGANIRILPPDHLPPCAMGSDELVQVSGVPS 273
           +T R++VP N+VGC++G+GG +I ++R  TGA IR+      P      +ELVQV+G+P+
Sbjct: 385 LTTRLVVPSNKVGCIIGEGGKVITEMRRRTGAEIRVYSKADKPKYLSFDEELVQVAGLPA 444

Query: 274 IAKKALYRISALLHQHPNKENPS 342
           IA+ AL  I++ L     ++  S
Sbjct: 445 IARGALTEIASRLRTRTLRDGSS 467


>ref|XP_004982741.1| PREDICTED: KH domain-containing protein At4g18375-like isoform X3
           [Setaria italica]
          Length = 776

 Score =  242 bits (617), Expect = 1e-61
 Identities = 142/282 (50%), Positives = 181/282 (64%), Gaps = 1/282 (0%)
 Frame = +1

Query: 1   QDALLKIHDRIAADEILRGGVVQERTESDDIVTARILVPKNQVGCLLGKGGNIIQQLRTN 180
           QDALLKIHD+I ADE+   GV   ++ES D VTARILV  NQVGCLLGKGG+IIQQLR++
Sbjct: 124 QDALLKIHDKIVADEV-HDGVANNKSESADDVTARILVQGNQVGCLLGKGGSIIQQLRSD 182

Query: 181 TGANIRILPPDHLPPCAMGSDELVQVSGVPSIAKKALYRISALLHQHPNKENPSLEDIIY 360
           TGA IR+LP + LP CA+ SDELVQ+SG PS+ +KALY IS  LHQHP KEN  LE+II 
Sbjct: 183 TGAGIRVLPSESLPQCALKSDELVQISGAPSLVRKALYEISTRLHQHPRKENRPLEEIID 242

Query: 361 ASTRGSYRSDSSIPAPLPQGNRVWSPYYSDVRDPSTVSRFNRYPDEPSRYPSGSFSRNSF 540
           ASTR    S    P PLP GN +    +  +  P  +   + Y D P R  + +      
Sbjct: 243 ASTRRKRES----PPPLPHGNPM---SHLHIDHPPPIPLLDPYRDGPLRTVAET------ 289

Query: 541 QEGEMAEEFSMRILCAXXXXXXXXXXXXXNIRQLEQQTGARIQVEDTAPDAE-ERVINIS 717
                 EEFS+RILCA             N++++EQQTGARI+V++   DA  ER+I +S
Sbjct: 290 ------EEFSVRILCASELIGSVIGKSGANVKRVEQQTGARIKVQEFDKDASGERLIIVS 343

Query: 718 CKEVPWETRSPTIEAALQIQNKTSSNSDDDAITTRLLVPSSK 843
            KE P +  SPTIEA + + +K S  S+   ++TRL+VPSSK
Sbjct: 344 SKETPADPISPTIEALMLLHDKVSVPSEKRHVSTRLVVPSSK 385



 Score = 68.2 bits (165), Expect = 4e-09
 Identities = 38/113 (33%), Positives = 62/113 (54%)
 Frame = +1

Query: 4   DALLKIHDRIAADEILRGGVVQERTESDDIVTARILVPKNQVGCLLGKGGNIIQQLRTNT 183
           +AL+ +HD+++     R             V+ R++VP ++VGC+LG+GG II ++R  T
Sbjct: 357 EALMLLHDKVSVPSEKRH------------VSTRLVVPSSKVGCILGEGGKIITEMRRRT 404

Query: 184 GANIRILPPDHLPPCAMGSDELVQVSGVPSIAKKALYRISALLHQHPNKENPS 342
            A IR+      P      DELVQV+G P+IA+ AL  +++ L     ++  S
Sbjct: 405 EAEIRVYSKADKPKYLSFDDELVQVAGPPAIARGALAEVASRLRTRTLRDTSS 457


>ref|XP_004982740.1| PREDICTED: KH domain-containing protein At4g18375-like isoform X2
           [Setaria italica]
          Length = 794

 Score =  242 bits (617), Expect = 1e-61
 Identities = 142/282 (50%), Positives = 181/282 (64%), Gaps = 1/282 (0%)
 Frame = +1

Query: 1   QDALLKIHDRIAADEILRGGVVQERTESDDIVTARILVPKNQVGCLLGKGGNIIQQLRTN 180
           QDALLKIHD+I ADE+   GV   ++ES D VTARILV  NQVGCLLGKGG+IIQQLR++
Sbjct: 124 QDALLKIHDKIVADEV-HDGVANNKSESADDVTARILVQGNQVGCLLGKGGSIIQQLRSD 182

Query: 181 TGANIRILPPDHLPPCAMGSDELVQVSGVPSIAKKALYRISALLHQHPNKENPSLEDIIY 360
           TGA IR+LP + LP CA+ SDELVQ+SG PS+ +KALY IS  LHQHP KEN  LE+II 
Sbjct: 183 TGAGIRVLPSESLPQCALKSDELVQISGAPSLVRKALYEISTRLHQHPRKENRPLEEIID 242

Query: 361 ASTRGSYRSDSSIPAPLPQGNRVWSPYYSDVRDPSTVSRFNRYPDEPSRYPSGSFSRNSF 540
           ASTR    S    P PLP GN +    +  +  P  +   + Y D P R  + +      
Sbjct: 243 ASTRRKRES----PPPLPHGNPM---SHLHIDHPPPIPLLDPYRDGPLRTVAET------ 289

Query: 541 QEGEMAEEFSMRILCAXXXXXXXXXXXXXNIRQLEQQTGARIQVEDTAPDAE-ERVINIS 717
                 EEFS+RILCA             N++++EQQTGARI+V++   DA  ER+I +S
Sbjct: 290 ------EEFSVRILCASELIGSVIGKSGANVKRVEQQTGARIKVQEFDKDASGERLIIVS 343

Query: 718 CKEVPWETRSPTIEAALQIQNKTSSNSDDDAITTRLLVPSSK 843
            KE P +  SPTIEA + + +K S  S+   ++TRL+VPSSK
Sbjct: 344 SKETPADPISPTIEALMLLHDKVSVPSEKRHVSTRLVVPSSK 385



 Score = 68.2 bits (165), Expect = 4e-09
 Identities = 38/113 (33%), Positives = 62/113 (54%)
 Frame = +1

Query: 4   DALLKIHDRIAADEILRGGVVQERTESDDIVTARILVPKNQVGCLLGKGGNIIQQLRTNT 183
           +AL+ +HD+++     R             V+ R++VP ++VGC+LG+GG II ++R  T
Sbjct: 357 EALMLLHDKVSVPSEKRH------------VSTRLVVPSSKVGCILGEGGKIITEMRRRT 404

Query: 184 GANIRILPPDHLPPCAMGSDELVQVSGVPSIAKKALYRISALLHQHPNKENPS 342
            A IR+      P      DELVQV+G P+IA+ AL  +++ L     ++  S
Sbjct: 405 EAEIRVYSKADKPKYLSFDDELVQVAGPPAIARGALAEVASRLRTRTLRDTSS 457


>ref|XP_004982739.1| PREDICTED: KH domain-containing protein At4g18375-like isoform X1
           [Setaria italica]
          Length = 795

 Score =  242 bits (617), Expect = 1e-61
 Identities = 142/282 (50%), Positives = 181/282 (64%), Gaps = 1/282 (0%)
 Frame = +1

Query: 1   QDALLKIHDRIAADEILRGGVVQERTESDDIVTARILVPKNQVGCLLGKGGNIIQQLRTN 180
           QDALLKIHD+I ADE+   GV   ++ES D VTARILV  NQVGCLLGKGG+IIQQLR++
Sbjct: 124 QDALLKIHDKIVADEV-HDGVANNKSESADDVTARILVQGNQVGCLLGKGGSIIQQLRSD 182

Query: 181 TGANIRILPPDHLPPCAMGSDELVQVSGVPSIAKKALYRISALLHQHPNKENPSLEDIIY 360
           TGA IR+LP + LP CA+ SDELVQ+SG PS+ +KALY IS  LHQHP KEN  LE+II 
Sbjct: 183 TGAGIRVLPSESLPQCALKSDELVQISGAPSLVRKALYEISTRLHQHPRKENRPLEEIID 242

Query: 361 ASTRGSYRSDSSIPAPLPQGNRVWSPYYSDVRDPSTVSRFNRYPDEPSRYPSGSFSRNSF 540
           ASTR    S    P PLP GN +    +  +  P  +   + Y D P R  + +      
Sbjct: 243 ASTRRKRES----PPPLPHGNPM---SHLHIDHPPPIPLLDPYRDGPLRTVAET------ 289

Query: 541 QEGEMAEEFSMRILCAXXXXXXXXXXXXXNIRQLEQQTGARIQVEDTAPDAE-ERVINIS 717
                 EEFS+RILCA             N++++EQQTGARI+V++   DA  ER+I +S
Sbjct: 290 ------EEFSVRILCASELIGSVIGKSGANVKRVEQQTGARIKVQEFDKDASGERLIIVS 343

Query: 718 CKEVPWETRSPTIEAALQIQNKTSSNSDDDAITTRLLVPSSK 843
            KE P +  SPTIEA + + +K S  S+   ++TRL+VPSSK
Sbjct: 344 SKETPADPISPTIEALMLLHDKVSVPSEKRHVSTRLVVPSSK 385



 Score = 68.2 bits (165), Expect = 4e-09
 Identities = 38/113 (33%), Positives = 62/113 (54%)
 Frame = +1

Query: 4   DALLKIHDRIAADEILRGGVVQERTESDDIVTARILVPKNQVGCLLGKGGNIIQQLRTNT 183
           +AL+ +HD+++     R             V+ R++VP ++VGC+LG+GG II ++R  T
Sbjct: 357 EALMLLHDKVSVPSEKRH------------VSTRLVVPSSKVGCILGEGGKIITEMRRRT 404

Query: 184 GANIRILPPDHLPPCAMGSDELVQVSGVPSIAKKALYRISALLHQHPNKENPS 342
            A IR+      P      DELVQV+G P+IA+ AL  +++ L     ++  S
Sbjct: 405 EAEIRVYSKADKPKYLSFDDELVQVAGPPAIARGALAEVASRLRTRTLRDTSS 457


>gb|EOY04206.1| RNA-binding KH domain-containing protein isoform 5 [Theobroma
           cacao]
          Length = 591

 Score =  239 bits (611), Expect = 7e-61
 Identities = 133/283 (46%), Positives = 179/283 (63%), Gaps = 2/283 (0%)
 Frame = +1

Query: 1   QDALLKIHDRIAADEILRGGVVQERTESDDIVTARILVPKNQVGCLLGKGGNIIQQLRTN 180
           QDALLK+HD+IA D++  GG+  +    + +VTAR+LVP N VGCLLGK G++IQ+LR+ 
Sbjct: 132 QDALLKVHDQIAEDDLF-GGMALDDDNGNTVVTARLLVPNNMVGCLLGKRGDVIQRLRSE 190

Query: 181 TGANIRILPPDHLPPCAMGSDELVQVSGVPSIAKKALYRISALLHQHPNKENPSLE-DII 357
           TGA+IRILP DHLP CAM +DELVQ+SG   +AK+ALY +S LLHQ+P K+NP L   + 
Sbjct: 191 TGASIRILPADHLPACAMATDELVQISGKRDVAKRALYEVSTLLHQNPRKDNPPLSFPVP 250

Query: 358 YASTRGSYRSDSSIPAPLPQGNRVWSPYYSDVRDPSTVSRFNRYPDEPSRYPSGSFSRNS 537
           +A        +   P+ +P  N +WS   S   D  ++     + + PS +  GS S   
Sbjct: 251 HAG------QNFPPPSAIPPSNPMWSHRNSSPHDIPSMPWMVPHGNRPSGFGPGSLSSFP 304

Query: 538 FQEG-EMAEEFSMRILCAXXXXXXXXXXXXXNIRQLEQQTGARIQVEDTAPDAEERVINI 714
              G E + EFSM+ILC              N++QL+Q+TGA I VED   +++ERVI +
Sbjct: 305 PARGAEASAEFSMKILCPAGKIGGVIGKGGFNVKQLQQETGAGIHVEDATIESDERVIRV 364

Query: 715 SCKEVPWETRSPTIEAALQIQNKTSSNSDDDAITTRLLVPSSK 843
           S  E  W  RS TI+A LQ+QNKTS  S+   +TTRLLVPSSK
Sbjct: 365 SAIEGLWNPRSQTIDAILQLQNKTSEFSEKGTVTTRLLVPSSK 407



 Score = 73.9 bits (180), Expect = 7e-11
 Identities = 35/73 (47%), Positives = 51/73 (69%)
 Frame = +1

Query: 94  VTARILVPKNQVGCLLGKGGNIIQQLRTNTGANIRILPPDHLPPCAMGSDELVQVSGVPS 273
           VT R+LVP ++VGC+LG+GG++I ++R  T A+IR+   D  P CA   +ELVQ+SG   
Sbjct: 397 VTTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVYSKDDKPKCASEDEELVQISGNFG 456

Query: 274 IAKKALYRISALL 312
           +AK AL  I++ L
Sbjct: 457 VAKDALAEIASRL 469


>gb|EOY04205.1| RNA-binding KH domain-containing protein isoform 4 [Theobroma
           cacao]
          Length = 706

 Score =  239 bits (611), Expect = 7e-61
 Identities = 133/283 (46%), Positives = 179/283 (63%), Gaps = 2/283 (0%)
 Frame = +1

Query: 1   QDALLKIHDRIAADEILRGGVVQERTESDDIVTARILVPKNQVGCLLGKGGNIIQQLRTN 180
           QDALLK+HD+IA D++  GG+  +    + +VTAR+LVP N VGCLLGK G++IQ+LR+ 
Sbjct: 132 QDALLKVHDQIAEDDLF-GGMALDDDNGNTVVTARLLVPNNMVGCLLGKRGDVIQRLRSE 190

Query: 181 TGANIRILPPDHLPPCAMGSDELVQVSGVPSIAKKALYRISALLHQHPNKENPSLE-DII 357
           TGA+IRILP DHLP CAM +DELVQ+SG   +AK+ALY +S LLHQ+P K+NP L   + 
Sbjct: 191 TGASIRILPADHLPACAMATDELVQISGKRDVAKRALYEVSTLLHQNPRKDNPPLSFPVP 250

Query: 358 YASTRGSYRSDSSIPAPLPQGNRVWSPYYSDVRDPSTVSRFNRYPDEPSRYPSGSFSRNS 537
           +A        +   P+ +P  N +WS   S   D  ++     + + PS +  GS S   
Sbjct: 251 HAG------QNFPPPSAIPPSNPMWSHRNSSPHDIPSMPWMVPHGNRPSGFGPGSLSSFP 304

Query: 538 FQEG-EMAEEFSMRILCAXXXXXXXXXXXXXNIRQLEQQTGARIQVEDTAPDAEERVINI 714
              G E + EFSM+ILC              N++QL+Q+TGA I VED   +++ERVI +
Sbjct: 305 PARGAEASAEFSMKILCPAGKIGGVIGKGGFNVKQLQQETGAGIHVEDATIESDERVIRV 364

Query: 715 SCKEVPWETRSPTIEAALQIQNKTSSNSDDDAITTRLLVPSSK 843
           S  E  W  RS TI+A LQ+QNKTS  S+   +TTRLLVPSSK
Sbjct: 365 SAIEGLWNPRSQTIDAILQLQNKTSEFSEKGTVTTRLLVPSSK 407



 Score = 73.9 bits (180), Expect = 7e-11
 Identities = 35/73 (47%), Positives = 51/73 (69%)
 Frame = +1

Query: 94  VTARILVPKNQVGCLLGKGGNIIQQLRTNTGANIRILPPDHLPPCAMGSDELVQVSGVPS 273
           VT R+LVP ++VGC+LG+GG++I ++R  T A+IR+   D  P CA   +ELVQ+SG   
Sbjct: 397 VTTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVYSKDDKPKCASEDEELVQISGNFG 456

Query: 274 IAKKALYRISALL 312
           +AK AL  I++ L
Sbjct: 457 VAKDALAEIASRL 469


>gb|EOY04203.1| RNA-binding KH domain-containing protein isoform 2 [Theobroma
           cacao]
          Length = 580

 Score =  239 bits (611), Expect = 7e-61
 Identities = 133/283 (46%), Positives = 179/283 (63%), Gaps = 2/283 (0%)
 Frame = +1

Query: 1   QDALLKIHDRIAADEILRGGVVQERTESDDIVTARILVPKNQVGCLLGKGGNIIQQLRTN 180
           QDALLK+HD+IA D++  GG+  +    + +VTAR+LVP N VGCLLGK G++IQ+LR+ 
Sbjct: 132 QDALLKVHDQIAEDDLF-GGMALDDDNGNTVVTARLLVPNNMVGCLLGKRGDVIQRLRSE 190

Query: 181 TGANIRILPPDHLPPCAMGSDELVQVSGVPSIAKKALYRISALLHQHPNKENPSLE-DII 357
           TGA+IRILP DHLP CAM +DELVQ+SG   +AK+ALY +S LLHQ+P K+NP L   + 
Sbjct: 191 TGASIRILPADHLPACAMATDELVQISGKRDVAKRALYEVSTLLHQNPRKDNPPLSFPVP 250

Query: 358 YASTRGSYRSDSSIPAPLPQGNRVWSPYYSDVRDPSTVSRFNRYPDEPSRYPSGSFSRNS 537
           +A        +   P+ +P  N +WS   S   D  ++     + + PS +  GS S   
Sbjct: 251 HAG------QNFPPPSAIPPSNPMWSHRNSSPHDIPSMPWMVPHGNRPSGFGPGSLSSFP 304

Query: 538 FQEG-EMAEEFSMRILCAXXXXXXXXXXXXXNIRQLEQQTGARIQVEDTAPDAEERVINI 714
              G E + EFSM+ILC              N++QL+Q+TGA I VED   +++ERVI +
Sbjct: 305 PARGAEASAEFSMKILCPAGKIGGVIGKGGFNVKQLQQETGAGIHVEDATIESDERVIRV 364

Query: 715 SCKEVPWETRSPTIEAALQIQNKTSSNSDDDAITTRLLVPSSK 843
           S  E  W  RS TI+A LQ+QNKTS  S+   +TTRLLVPSSK
Sbjct: 365 SAIEGLWNPRSQTIDAILQLQNKTSEFSEKGTVTTRLLVPSSK 407



 Score = 73.9 bits (180), Expect = 7e-11
 Identities = 35/73 (47%), Positives = 51/73 (69%)
 Frame = +1

Query: 94  VTARILVPKNQVGCLLGKGGNIIQQLRTNTGANIRILPPDHLPPCAMGSDELVQVSGVPS 273
           VT R+LVP ++VGC+LG+GG++I ++R  T A+IR+   D  P CA   +ELVQ+SG   
Sbjct: 397 VTTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVYSKDDKPKCASEDEELVQISGNFG 456

Query: 274 IAKKALYRISALL 312
           +AK AL  I++ L
Sbjct: 457 VAKDALAEIASRL 469


>gb|EOY04202.1| RNA-binding KH domain-containing protein isoform 1 [Theobroma
           cacao] gi|508712307|gb|EOY04204.1| RNA-binding KH
           domain-containing protein isoform 1 [Theobroma cacao]
          Length = 706

 Score =  239 bits (611), Expect = 7e-61
 Identities = 133/283 (46%), Positives = 179/283 (63%), Gaps = 2/283 (0%)
 Frame = +1

Query: 1   QDALLKIHDRIAADEILRGGVVQERTESDDIVTARILVPKNQVGCLLGKGGNIIQQLRTN 180
           QDALLK+HD+IA D++  GG+  +    + +VTAR+LVP N VGCLLGK G++IQ+LR+ 
Sbjct: 132 QDALLKVHDQIAEDDLF-GGMALDDDNGNTVVTARLLVPNNMVGCLLGKRGDVIQRLRSE 190

Query: 181 TGANIRILPPDHLPPCAMGSDELVQVSGVPSIAKKALYRISALLHQHPNKENPSLE-DII 357
           TGA+IRILP DHLP CAM +DELVQ+SG   +AK+ALY +S LLHQ+P K+NP L   + 
Sbjct: 191 TGASIRILPADHLPACAMATDELVQISGKRDVAKRALYEVSTLLHQNPRKDNPPLSFPVP 250

Query: 358 YASTRGSYRSDSSIPAPLPQGNRVWSPYYSDVRDPSTVSRFNRYPDEPSRYPSGSFSRNS 537
           +A        +   P+ +P  N +WS   S   D  ++     + + PS +  GS S   
Sbjct: 251 HAG------QNFPPPSAIPPSNPMWSHRNSSPHDIPSMPWMVPHGNRPSGFGPGSLSSFP 304

Query: 538 FQEG-EMAEEFSMRILCAXXXXXXXXXXXXXNIRQLEQQTGARIQVEDTAPDAEERVINI 714
              G E + EFSM+ILC              N++QL+Q+TGA I VED   +++ERVI +
Sbjct: 305 PARGAEASAEFSMKILCPAGKIGGVIGKGGFNVKQLQQETGAGIHVEDATIESDERVIRV 364

Query: 715 SCKEVPWETRSPTIEAALQIQNKTSSNSDDDAITTRLLVPSSK 843
           S  E  W  RS TI+A LQ+QNKTS  S+   +TTRLLVPSSK
Sbjct: 365 SAIEGLWNPRSQTIDAILQLQNKTSEFSEKGTVTTRLLVPSSK 407



 Score = 73.9 bits (180), Expect = 7e-11
 Identities = 35/73 (47%), Positives = 51/73 (69%)
 Frame = +1

Query: 94  VTARILVPKNQVGCLLGKGGNIIQQLRTNTGANIRILPPDHLPPCAMGSDELVQVSGVPS 273
           VT R+LVP ++VGC+LG+GG++I ++R  T A+IR+   D  P CA   +ELVQ+SG   
Sbjct: 397 VTTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVYSKDDKPKCASEDEELVQISGNFG 456

Query: 274 IAKKALYRISALL 312
           +AK AL  I++ L
Sbjct: 457 VAKDALAEIASRL 469


>ref|XP_002516721.1| Poly(rC)-binding protein, putative [Ricinus communis]
           gi|223544094|gb|EEF45619.1| Poly(rC)-binding protein,
           putative [Ricinus communis]
          Length = 537

 Score =  236 bits (601), Expect = 1e-59
 Identities = 129/284 (45%), Positives = 176/284 (61%), Gaps = 3/284 (1%)
 Frame = +1

Query: 1   QDALLKIHDRIAADEILRGGVVQERTESDDIVTARILVPKNQVGCLLGKGGNIIQQLRTN 180
           QDALLK+HDRI  +++  GG+  +    +  VTAR+LVP N VGCLLGK G++IQ+LR+ 
Sbjct: 127 QDALLKVHDRIVEEDLF-GGMTSDDDNENGFVTARLLVPNNMVGCLLGKRGDVIQRLRSE 185

Query: 181 TGANIRILPPDHLPPCAMGSDELVQVSGVPSIAKKALYRISALLHQHPNKENPSLEDIIY 360
           TGANIR+LP DHLP CAM +DELVQ+S  P +AKKALY +S LLHQ+P K+ P    + Y
Sbjct: 186 TGANIRVLPADHLPTCAMSTDELVQISAKPDVAKKALYEVSTLLHQNPRKDKPPSVPMPY 245

Query: 361 ASTRGSYRSDSSIPAPLPQGNRVWSPYYSDVRDPSTVSRFNRYPDEPSRYPSGSFSRNSF 540
            S +  +     +    P G+ +W P+++       +    RY  + S +  G F  +  
Sbjct: 246 -SGQSFHPPGGPMKNLPPLGSPMW-PHHNSSHSIPPMPIMGRYGSQSSGFGPGGF--DDV 301

Query: 541 QEGEMAE---EFSMRILCAXXXXXXXXXXXXXNIRQLEQQTGARIQVEDTAPDAEERVIN 711
             G +AE   EFSM+ILC+             N++ ++Q TGA I VED + +++ERVI 
Sbjct: 302 PRGHVAEPSAEFSMKILCSAGKIGGVIGKGGSNVKVVQQDTGASIHVEDASAESDERVIR 361

Query: 712 ISCKEVPWETRSPTIEAALQIQNKTSSNSDDDAITTRLLVPSSK 843
           +S  E  W  RS TI+A LQ+QNKTS  S+   ITTRLLVPSSK
Sbjct: 362 VSASEALWNPRSQTIDAILQLQNKTSDFSEKGTITTRLLVPSSK 405



 Score = 73.9 bits (180), Expect = 7e-11
 Identities = 34/73 (46%), Positives = 50/73 (68%)
 Frame = +1

Query: 94  VTARILVPKNQVGCLLGKGGNIIQQLRTNTGANIRILPPDHLPPCAMGSDELVQVSGVPS 273
           +T R+LVP ++VGC+LG+GG +I ++R  T A+IR+   D  P CA   +ELVQ+SG   
Sbjct: 395 ITTRLLVPSSKVGCILGQGGQVINEMRRRTQADIRVYSKDEKPKCASEDEELVQISGKFG 454

Query: 274 IAKKALYRISALL 312
           +AK AL  I++ L
Sbjct: 455 VAKDALAEIASRL 467


>gb|EMT12700.1| KH domain-containing protein [Aegilops tauschii]
          Length = 791

 Score =  235 bits (600), Expect = 1e-59
 Identities = 142/297 (47%), Positives = 180/297 (60%), Gaps = 16/297 (5%)
 Frame = +1

Query: 1   QDALLKIHDRIAADEILRGGVVQERTESDDIVTARILVPKNQVGCLLGKGGNIIQQLRTN 180
           QDALLKIHD+IAADE    GV  E +E+   VTARILVP NQVGCLLGKGG+IIQQLR +
Sbjct: 125 QDALLKIHDKIAADEDSNDGVSYENSETAGDVTARILVPGNQVGCLLGKGGSIIQQLRND 184

Query: 181 TGANIRILPPDHLPPCAMGSDELVQVSGVPSIAKKALYRISALLHQHPNKENPSLEDIIY 360
           TGA IR+LP ++LP CA+ SDELVQ+SG PS+ +KALY IS  LH+HP KENPSLE+II 
Sbjct: 185 TGAGIRVLPSENLPQCALKSDELVQISGAPSLVRKALYEISTRLHRHPRKENPSLEEIID 244

Query: 361 ASTRGSYRSDSSIPAPLPQGNRVWSPYYSDVRDPSTVSRFNRYPDEPSRYPSGSFSRNSF 540
           AST+    S    P PL   N +    + D   P  +   + Y + P +YP         
Sbjct: 245 ASTQRKRES----PPPLLHENHMLPHLHVD--HPPPMPLLDPYRNGPLQYPVPE------ 292

Query: 541 QEGEMAEEFSMRILCAXXXXXXXXXXXXXNIRQLEQQTGARIQVEDTAPDAE-ERVINIS 717
                 EEFS++ILC              N+RQ+EQQTGARI V++   DA  ER+I IS
Sbjct: 293 -----PEEFSIKILCPSELIGPVIGRSGANVRQVEQQTGARIMVQELPKDASGERLIVIS 347

Query: 718 CKEVPWETRSPTIEAALQIQNKTSSN---------------SDDDAITTRLLVPSSK 843
            KE+P +  SPTIEA + + +K S +               S++  + TRL+VPS K
Sbjct: 348 SKEIPADPVSPTIEALILLHSKVSESKVSEPSVSAPSESAPSEEHNLVTRLVVPSRK 404