BLASTX nr result

ID: Zingiber24_contig00004445 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00004445
         (210 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002462637.1| hypothetical protein SORBIDRAFT_02g029380 [S...   105   5e-21
pdb|3J61|G Chain G, Localization Of The Large Subunit Ribosomal ...   105   6e-21
ref|NP_001061550.1| Os08g0326400 [Oryza sativa Japonica Group] g...   105   6e-21
ref|XP_006661416.1| PREDICTED: 60S ribosomal protein L7a-like [O...   105   8e-21
ref|XP_004965571.1| PREDICTED: 60S ribosomal protein L7a-like [S...   105   8e-21
gb|EOY22553.1| Ribosomal protein L7Ae/L30e/S12e/Gadd45 family pr...   105   8e-21
ref|XP_006660046.1| PREDICTED: 60S ribosomal protein L7a-like, p...   104   1e-20
ref|XP_004143647.1| PREDICTED: 60S ribosomal protein L7a-like [C...   104   1e-20
ref|NP_001148801.1| LOC100282418 [Zea mays] gi|195622244|gb|ACG3...   104   1e-20
ref|NP_001147139.1| 60S ribosomal protein L7a [Zea mays] gi|1946...   104   1e-20
gb|EMS59723.1| 60S ribosomal protein L7a [Triticum urartu]            103   2e-20
ref|XP_003578397.1| PREDICTED: 60S ribosomal protein L7a-like [B...   103   2e-20
ref|XP_006844607.1| hypothetical protein AMTR_s00016p00218360 [A...   103   3e-20
ref|XP_004974014.1| PREDICTED: 60S ribosomal protein L7a-like [S...   103   3e-20
ref|XP_004957297.1| PREDICTED: 60S ribosomal protein L7a-like [S...   103   3e-20
ref|XP_004148008.1| PREDICTED: 60S ribosomal protein L7a-like [C...   103   3e-20
emb|CBI16928.3| unnamed protein product [Vitis vinifera]              103   3e-20
ref|XP_002525923.1| 60S ribosomal protein L7a, putative [Ricinus...   103   3e-20
gb|ACG47588.1| 60S ribosomal protein L7a [Zea mays]                   103   3e-20
gb|ACF84860.1| unknown [Zea mays] gi|414869683|tpg|DAA48240.1| T...   103   3e-20

>ref|XP_002462637.1| hypothetical protein SORBIDRAFT_02g029380 [Sorghum bicolor]
           gi|242049790|ref|XP_002462639.1| hypothetical protein
           SORBIDRAFT_02g029400 [Sorghum bicolor]
           gi|241926014|gb|EER99158.1| hypothetical protein
           SORBIDRAFT_02g029380 [Sorghum bicolor]
           gi|241926016|gb|EER99160.1| hypothetical protein
           SORBIDRAFT_02g029400 [Sorghum bicolor]
          Length = 258

 Score =  105 bits (263), Expect = 5e-21
 Identities = 52/70 (74%), Positives = 53/70 (75%)
 Frame = +1

Query: 1   KRENVVNPLFEKRPKQFGIGGALPPKKDLRRFVKWPKVVXXXXXXXXXXXXXXVPPALNQ 180
           K + VVNPLFEKRPKQFGIGGALPPKKDL RFVKWPKVV              VPPALNQ
Sbjct: 16  KTDKVVNPLFEKRPKQFGIGGALPPKKDLHRFVKWPKVVRIQRQRRILKQRLKVPPALNQ 75

Query: 181 FTRTLDKNLA 210
           FTRTLDKNLA
Sbjct: 76  FTRTLDKNLA 85


>pdb|3J61|G Chain G, Localization Of The Large Subunit Ribosomal Proteins Into
           A 5.5 A Cryo-em Map Of Triticum Aestivum Translating 80s
           Ribosome
          Length = 257

 Score =  105 bits (262), Expect = 6e-21
 Identities = 52/70 (74%), Positives = 52/70 (74%)
 Frame = +1

Query: 1   KRENVVNPLFEKRPKQFGIGGALPPKKDLRRFVKWPKVVXXXXXXXXXXXXXXVPPALNQ 180
           K E V NPLFEKRPKQFGIGGALPPKKDL RFVKWPKVV              VPPALNQ
Sbjct: 15  KTEKVTNPLFEKRPKQFGIGGALPPKKDLHRFVKWPKVVRIQRQRRILKQRLKVPPALNQ 74

Query: 181 FTRTLDKNLA 210
           FTRTLDKNLA
Sbjct: 75  FTRTLDKNLA 84


>ref|NP_001061550.1| Os08g0326400 [Oryza sativa Japonica Group]
           gi|115480049|ref|NP_001063618.1| Os09g0507800 [Oryza
           sativa Japonica Group] gi|548774|sp|P35685.1|RL7A_ORYSJ
           RecName: Full=60S ribosomal protein L7a
           gi|303855|dbj|BAA02156.1| ribosomal protein L7A [Oryza
           sativa Japonica Group] gi|38423963|dbj|BAD01672.1| 60S
           ribosomal protein L7A [Oryza sativa Japonica Group]
           gi|38637005|dbj|BAD03264.1| 60S ribosomal protein L7A
           [Oryza sativa Japonica Group]
           gi|113623519|dbj|BAF23464.1| Os08g0326400 [Oryza sativa
           Japonica Group] gi|113631851|dbj|BAF25532.1|
           Os09g0507800 [Oryza sativa Japonica Group]
           gi|125564310|gb|EAZ09690.1| hypothetical protein
           OsI_31973 [Oryza sativa Indica Group]
           gi|125606274|gb|EAZ45310.1| hypothetical protein
           OsJ_29953 [Oryza sativa Japonica Group]
           gi|215692651|dbj|BAG88071.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215692800|dbj|BAG88244.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215768136|dbj|BAH00365.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|218200951|gb|EEC83378.1| hypothetical protein
           OsI_28791 [Oryza sativa Indica Group]
          Length = 258

 Score =  105 bits (262), Expect = 6e-21
 Identities = 52/70 (74%), Positives = 52/70 (74%)
 Frame = +1

Query: 1   KRENVVNPLFEKRPKQFGIGGALPPKKDLRRFVKWPKVVXXXXXXXXXXXXXXVPPALNQ 180
           K E V NPLFEKRPKQFGIGGALPPKKDL RFVKWPKVV              VPPALNQ
Sbjct: 16  KTEKVTNPLFEKRPKQFGIGGALPPKKDLHRFVKWPKVVRIQRQRRILKQRLKVPPALNQ 75

Query: 181 FTRTLDKNLA 210
           FTRTLDKNLA
Sbjct: 76  FTRTLDKNLA 85


>ref|XP_006661416.1| PREDICTED: 60S ribosomal protein L7a-like [Oryza brachyantha]
          Length = 268

 Score =  105 bits (261), Expect = 8e-21
 Identities = 52/70 (74%), Positives = 52/70 (74%)
 Frame = +1

Query: 1   KRENVVNPLFEKRPKQFGIGGALPPKKDLRRFVKWPKVVXXXXXXXXXXXXXXVPPALNQ 180
           K E V NPLFEKRPKQFGIGGALPPKKDL RFVKWPKVV              VPPALNQ
Sbjct: 26  KPEKVTNPLFEKRPKQFGIGGALPPKKDLHRFVKWPKVVRIQRQRRILKQRLKVPPALNQ 85

Query: 181 FTRTLDKNLA 210
           FTRTLDKNLA
Sbjct: 86  FTRTLDKNLA 95


>ref|XP_004965571.1| PREDICTED: 60S ribosomal protein L7a-like [Setaria italica]
          Length = 258

 Score =  105 bits (261), Expect = 8e-21
 Identities = 52/70 (74%), Positives = 52/70 (74%)
 Frame = +1

Query: 1   KRENVVNPLFEKRPKQFGIGGALPPKKDLRRFVKWPKVVXXXXXXXXXXXXXXVPPALNQ 180
           K E V NPLFEKRPKQFGIGGALPPKKDL RFVKWPKVV              VPPALNQ
Sbjct: 16  KPEKVTNPLFEKRPKQFGIGGALPPKKDLHRFVKWPKVVRIQRQRRILKQRLKVPPALNQ 75

Query: 181 FTRTLDKNLA 210
           FTRTLDKNLA
Sbjct: 76  FTRTLDKNLA 85


>gb|EOY22553.1| Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein [Theobroma
           cacao]
          Length = 258

 Score =  105 bits (261), Expect = 8e-21
 Identities = 51/70 (72%), Positives = 53/70 (75%)
 Frame = +1

Query: 1   KRENVVNPLFEKRPKQFGIGGALPPKKDLRRFVKWPKVVXXXXXXXXXXXXXXVPPALNQ 180
           K+E V NPLFEKRPKQFGIGGALPPKKDL RFVKWPKVV              VPPALNQ
Sbjct: 16  KQEKVANPLFEKRPKQFGIGGALPPKKDLHRFVKWPKVVRIQRKKRILKQRLKVPPALNQ 75

Query: 181 FTRTLDKNLA 210
           FT+TLDKNLA
Sbjct: 76  FTKTLDKNLA 85


>ref|XP_006660046.1| PREDICTED: 60S ribosomal protein L7a-like, partial [Oryza
           brachyantha]
          Length = 247

 Score =  104 bits (259), Expect = 1e-20
 Identities = 51/69 (73%), Positives = 52/69 (75%)
 Frame = +1

Query: 4   RENVVNPLFEKRPKQFGIGGALPPKKDLRRFVKWPKVVXXXXXXXXXXXXXXVPPALNQF 183
           +E V NPLFEKRPKQFGIGGALPPKKDL RFVKWPKVV              VPPALNQF
Sbjct: 6   QEKVTNPLFEKRPKQFGIGGALPPKKDLHRFVKWPKVVRIQRQRRILKQRLKVPPALNQF 65

Query: 184 TRTLDKNLA 210
           TRTLDKNLA
Sbjct: 66  TRTLDKNLA 74


>ref|XP_004143647.1| PREDICTED: 60S ribosomal protein L7a-like [Cucumis sativus]
           gi|449506496|ref|XP_004162766.1| PREDICTED: 60S
           ribosomal protein L7a-like [Cucumis sativus]
          Length = 257

 Score =  104 bits (259), Expect = 1e-20
 Identities = 51/70 (72%), Positives = 53/70 (75%)
 Frame = +1

Query: 1   KRENVVNPLFEKRPKQFGIGGALPPKKDLRRFVKWPKVVXXXXXXXXXXXXXXVPPALNQ 180
           K E VVNPLFEKRPKQFGIGGALPPK+DL RFVKWPKVV              VPPALNQ
Sbjct: 15  KTEKVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKVVQIQRKKRILKQRLKVPPALNQ 74

Query: 181 FTRTLDKNLA 210
           FT+TLDKNLA
Sbjct: 75  FTKTLDKNLA 84


>ref|NP_001148801.1| LOC100282418 [Zea mays] gi|195622244|gb|ACG32952.1| 60S ribosomal
           protein L7a [Zea mays] gi|219887097|gb|ACL53923.1|
           unknown [Zea mays] gi|414886143|tpg|DAA62157.1| TPA: 60S
           ribosomal protein L7a [Zea mays]
          Length = 258

 Score =  104 bits (259), Expect = 1e-20
 Identities = 51/70 (72%), Positives = 52/70 (74%)
 Frame = +1

Query: 1   KRENVVNPLFEKRPKQFGIGGALPPKKDLRRFVKWPKVVXXXXXXXXXXXXXXVPPALNQ 180
           K + V NPLFEKRPKQFGIGGALPPKKDL RFVKWPKVV              VPPALNQ
Sbjct: 16  KTDKVTNPLFEKRPKQFGIGGALPPKKDLHRFVKWPKVVRIQRQRRILKQRLKVPPALNQ 75

Query: 181 FTRTLDKNLA 210
           FTRTLDKNLA
Sbjct: 76  FTRTLDKNLA 85


>ref|NP_001147139.1| 60S ribosomal protein L7a [Zea mays] gi|194699752|gb|ACF83960.1|
           unknown [Zea mays] gi|195607614|gb|ACG25637.1| 60S
           ribosomal protein L7a [Zea mays]
           gi|414589924|tpg|DAA40495.1| TPA: 60S ribosomal protein
           L7a [Zea mays]
          Length = 258

 Score =  104 bits (259), Expect = 1e-20
 Identities = 51/70 (72%), Positives = 52/70 (74%)
 Frame = +1

Query: 1   KRENVVNPLFEKRPKQFGIGGALPPKKDLRRFVKWPKVVXXXXXXXXXXXXXXVPPALNQ 180
           K + V NPLFEKRPKQFGIGGALPPKKDL RFVKWPKVV              VPPALNQ
Sbjct: 16  KTDKVTNPLFEKRPKQFGIGGALPPKKDLHRFVKWPKVVRIQRQRRILKQRLKVPPALNQ 75

Query: 181 FTRTLDKNLA 210
           FTRTLDKNLA
Sbjct: 76  FTRTLDKNLA 85


>gb|EMS59723.1| 60S ribosomal protein L7a [Triticum urartu]
          Length = 278

 Score =  103 bits (257), Expect = 2e-20
 Identities = 51/70 (72%), Positives = 52/70 (74%)
 Frame = +1

Query: 1   KRENVVNPLFEKRPKQFGIGGALPPKKDLRRFVKWPKVVXXXXXXXXXXXXXXVPPALNQ 180
           K E V NPLFEKRPKQFGIGGALPPKKDL RFVKWPKVV              VPPAL+Q
Sbjct: 16  KTEKVTNPLFEKRPKQFGIGGALPPKKDLHRFVKWPKVVRIQRQRRILKQRLKVPPALHQ 75

Query: 181 FTRTLDKNLA 210
           FTRTLDKNLA
Sbjct: 76  FTRTLDKNLA 85


>ref|XP_003578397.1| PREDICTED: 60S ribosomal protein L7a-like [Brachypodium distachyon]
           gi|357166491|ref|XP_003580728.1| PREDICTED: 60S
           ribosomal protein L7a-like [Brachypodium distachyon]
          Length = 258

 Score =  103 bits (257), Expect = 2e-20
 Identities = 51/70 (72%), Positives = 52/70 (74%)
 Frame = +1

Query: 1   KRENVVNPLFEKRPKQFGIGGALPPKKDLRRFVKWPKVVXXXXXXXXXXXXXXVPPALNQ 180
           K E V NPLFEKRPKQFGIGGALPPKKDL RFVKWPKVV              VPPAL+Q
Sbjct: 16  KAEKVTNPLFEKRPKQFGIGGALPPKKDLHRFVKWPKVVRIQRQRRILKQRLKVPPALHQ 75

Query: 181 FTRTLDKNLA 210
           FTRTLDKNLA
Sbjct: 76  FTRTLDKNLA 85


>ref|XP_006844607.1| hypothetical protein AMTR_s00016p00218360 [Amborella trichopoda]
           gi|548847078|gb|ERN06282.1| hypothetical protein
           AMTR_s00016p00218360 [Amborella trichopoda]
          Length = 94

 Score =  103 bits (256), Expect = 3e-20
 Identities = 50/69 (72%), Positives = 52/69 (75%)
 Frame = +1

Query: 1   KRENVVNPLFEKRPKQFGIGGALPPKKDLRRFVKWPKVVXXXXXXXXXXXXXXVPPALNQ 180
           K E VVNPLFEKRPKQFGIGGALPPK+DL RFVKWPKVV              VPPALNQ
Sbjct: 16  KAEKVVNPLFEKRPKQFGIGGALPPKRDLHRFVKWPKVVRIQRQRRILKQRLKVPPALNQ 75

Query: 181 FTRTLDKNL 207
           FT+TLDKNL
Sbjct: 76  FTKTLDKNL 84


>ref|XP_004974014.1| PREDICTED: 60S ribosomal protein L7a-like [Setaria italica]
          Length = 257

 Score =  103 bits (256), Expect = 3e-20
 Identities = 51/70 (72%), Positives = 52/70 (74%)
 Frame = +1

Query: 1   KRENVVNPLFEKRPKQFGIGGALPPKKDLRRFVKWPKVVXXXXXXXXXXXXXXVPPALNQ 180
           K+  V NPLFEKRPKQFGIGGALPPKKDL RFVKWPKVV              VPPALNQ
Sbjct: 15  KKTVVTNPLFEKRPKQFGIGGALPPKKDLHRFVKWPKVVRIQRQRRILKQRLKVPPALNQ 74

Query: 181 FTRTLDKNLA 210
           FTRTLDKNLA
Sbjct: 75  FTRTLDKNLA 84


>ref|XP_004957297.1| PREDICTED: 60S ribosomal protein L7a-like [Setaria italica]
          Length = 257

 Score =  103 bits (256), Expect = 3e-20
 Identities = 51/70 (72%), Positives = 52/70 (74%)
 Frame = +1

Query: 1   KRENVVNPLFEKRPKQFGIGGALPPKKDLRRFVKWPKVVXXXXXXXXXXXXXXVPPALNQ 180
           K+  V NPLFEKRPKQFGIGGALPPKKDL RFVKWPKVV              VPPALNQ
Sbjct: 15  KKTVVTNPLFEKRPKQFGIGGALPPKKDLHRFVKWPKVVRIQRQRRILKQRLKVPPALNQ 74

Query: 181 FTRTLDKNLA 210
           FTRTLDKNLA
Sbjct: 75  FTRTLDKNLA 84


>ref|XP_004148008.1| PREDICTED: 60S ribosomal protein L7a-like [Cucumis sativus]
           gi|449501986|ref|XP_004161512.1| PREDICTED: 60S
           ribosomal protein L7a-like [Cucumis sativus]
          Length = 257

 Score =  103 bits (256), Expect = 3e-20
 Identities = 50/70 (71%), Positives = 53/70 (75%)
 Frame = +1

Query: 1   KRENVVNPLFEKRPKQFGIGGALPPKKDLRRFVKWPKVVXXXXXXXXXXXXXXVPPALNQ 180
           K E VVNPLFEKRPKQFGIGGA+PPK+DL RFVKWPKVV              VPPALNQ
Sbjct: 15  KPEKVVNPLFEKRPKQFGIGGAIPPKRDLTRFVKWPKVVQIQRKKRILKQRLKVPPALNQ 74

Query: 181 FTRTLDKNLA 210
           FT+TLDKNLA
Sbjct: 75  FTKTLDKNLA 84


>emb|CBI16928.3| unnamed protein product [Vitis vinifera]
          Length = 337

 Score =  103 bits (256), Expect = 3e-20
 Identities = 51/70 (72%), Positives = 52/70 (74%)
 Frame = +1

Query: 1   KRENVVNPLFEKRPKQFGIGGALPPKKDLRRFVKWPKVVXXXXXXXXXXXXXXVPPALNQ 180
           K E VVNPLFEKRPKQFGIGGALPPKKDL RFVKWP VV              VPPALNQ
Sbjct: 95  KTEKVVNPLFEKRPKQFGIGGALPPKKDLTRFVKWPHVVRIQRKRRILRQRLKVPPALNQ 154

Query: 181 FTRTLDKNLA 210
           FT+TLDKNLA
Sbjct: 155 FTKTLDKNLA 164


>ref|XP_002525923.1| 60S ribosomal protein L7a, putative [Ricinus communis]
           gi|223534752|gb|EEF36443.1| 60S ribosomal protein L7a,
           putative [Ricinus communis]
          Length = 570

 Score =  103 bits (256), Expect = 3e-20
 Identities = 51/70 (72%), Positives = 52/70 (74%)
 Frame = +1

Query: 1   KRENVVNPLFEKRPKQFGIGGALPPKKDLRRFVKWPKVVXXXXXXXXXXXXXXVPPALNQ 180
           K E V NPLFEKRPKQFGIGGALPPKKDL RFVKWPKVV              VPPALNQ
Sbjct: 328 KPEKVQNPLFEKRPKQFGIGGALPPKKDLHRFVKWPKVVQIQRKRRILRQRLKVPPALNQ 387

Query: 181 FTRTLDKNLA 210
           FT+TLDKNLA
Sbjct: 388 FTKTLDKNLA 397


>gb|ACG47588.1| 60S ribosomal protein L7a [Zea mays]
          Length = 255

 Score =  103 bits (256), Expect = 3e-20
 Identities = 51/70 (72%), Positives = 52/70 (74%)
 Frame = +1

Query: 1   KRENVVNPLFEKRPKQFGIGGALPPKKDLRRFVKWPKVVXXXXXXXXXXXXXXVPPALNQ 180
           K+  V NPLFEKRPKQFGIGGALPPKKDL RFVKWPKVV              VPPALNQ
Sbjct: 15  KKAVVTNPLFEKRPKQFGIGGALPPKKDLHRFVKWPKVVRIQRQRRILKQRLKVPPALNQ 74

Query: 181 FTRTLDKNLA 210
           FTRTLDKNLA
Sbjct: 75  FTRTLDKNLA 84


>gb|ACF84860.1| unknown [Zea mays] gi|414869683|tpg|DAA48240.1| TPA: hypothetical
           protein ZEAMMB73_836459 [Zea mays]
          Length = 185

 Score =  103 bits (256), Expect = 3e-20
 Identities = 51/70 (72%), Positives = 52/70 (74%)
 Frame = +1

Query: 1   KRENVVNPLFEKRPKQFGIGGALPPKKDLRRFVKWPKVVXXXXXXXXXXXXXXVPPALNQ 180
           K+  V NPLFEKRPKQFGIGGALPPKKDL RFVKWPKVV              VPPALNQ
Sbjct: 15  KKAVVTNPLFEKRPKQFGIGGALPPKKDLHRFVKWPKVVRIQRQRRILKQRLKVPPALNQ 74

Query: 181 FTRTLDKNLA 210
           FTRTLDKNLA
Sbjct: 75  FTRTLDKNLA 84


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