BLASTX nr result
ID: Zingiber24_contig00004416
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00004416
(543 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EAZ05652.1| hypothetical protein OsI_27879 [Oryza sativa Indi... 102 8e-20
ref|XP_003571456.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B... 101 1e-19
dbj|BAJ99124.1| predicted protein [Hordeum vulgare subsp. vulgare] 101 1e-19
gb|ACN36122.1| unknown [Zea mays] gi|413921263|gb|AFW61195.1| pu... 101 1e-19
ref|NP_001151265.1| LOC100284898 precursor [Zea mays] gi|1956453... 101 1e-19
ref|XP_004972801.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B... 100 2e-19
ref|NP_001061030.1| Os08g0157400 [Oryza sativa Japonica Group] g... 99 7e-19
ref|XP_002445080.1| hypothetical protein SORBIDRAFT_07g003830 [S... 99 8e-19
gb|EEC81928.1| hypothetical protein OsI_25779 [Oryza sativa Indi... 89 7e-16
dbj|BAJ92172.1| predicted protein [Hordeum vulgare subsp. vulgare] 88 2e-15
ref|XP_002448380.1| hypothetical protein SORBIDRAFT_06g026310 [S... 86 4e-15
emb|CAN67364.1| hypothetical protein VITISV_033303 [Vitis vinifera] 86 4e-15
gb|ACR36207.1| unknown [Zea mays] gi|413938264|gb|AFW72815.1| pu... 86 6e-15
ref|NP_001148352.1| protein binding protein [Zea mays] gi|195618... 86 6e-15
gb|ACR37714.1| unknown [Zea mays] gi|413938259|gb|AFW72810.1| pu... 85 1e-14
gb|AFG58067.1| hypothetical protein 0_13343_01, partial [Pinus t... 85 1e-14
gb|ACG28545.1| protein binding protein [Zea mays] 83 4e-14
ref|NP_001137079.1| LOC100217252 [Zea mays] gi|194698258|gb|ACF8... 83 4e-14
ref|XP_002518941.1| hypothetical protein RCOM_1314350 [Ricinus c... 83 5e-14
ref|NP_001150893.1| RING zinc finger protein-like [Zea mays] gi|... 82 6e-14
>gb|EAZ05652.1| hypothetical protein OsI_27879 [Oryza sativa Indica Group]
Length = 176
Score = 102 bits (253), Expect = 8e-20
Identities = 50/93 (53%), Positives = 62/93 (66%), Gaps = 6/93 (6%)
Frame = +1
Query: 145 SVKSRLPVVRFSAL------RSDGSALCAVCLGALHPSHEVRHLGNCLHAFHKSCIDKWV 306
++K+RLP VR++ + +A CAVCLGAL H VR LGNC HAFHK+CIDKWV
Sbjct: 80 AIKARLPAVRYADFVRCRRAAAAAAASCAVCLGALEARHRVRELGNCAHAFHKACIDKWV 139
Query: 307 DVGQLTCPLCRAPLLHHQPPEDDDEVSPRSRST 405
D GQ TCPLCRA LL P DDD+ + + +T
Sbjct: 140 DKGQATCPLCRAALL---PSADDDDAAAIAATT 169
>ref|XP_003571456.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B-like [Brachypodium
distachyon]
Length = 184
Score = 101 bits (252), Expect = 1e-19
Identities = 49/77 (63%), Positives = 54/77 (70%), Gaps = 7/77 (9%)
Frame = +1
Query: 142 ASVKSRLPVVRFSALRS-------DGSALCAVCLGALHPSHEVRHLGNCLHAFHKSCIDK 300
A +K+RLP VR++ LRS A CAVCLGAL H VR LGNC HAFHK+CIDK
Sbjct: 82 ADIKARLPAVRYADLRSRRGAGNAPAPACCAVCLGALEARHRVRELGNCAHAFHKACIDK 141
Query: 301 WVDVGQLTCPLCRAPLL 351
WVD GQ TCPLCRA LL
Sbjct: 142 WVDKGQATCPLCRALLL 158
>dbj|BAJ99124.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 172
Score = 101 bits (252), Expect = 1e-19
Identities = 52/87 (59%), Positives = 58/87 (66%), Gaps = 8/87 (9%)
Frame = +1
Query: 142 ASVKSRLPVVRFSALRSDG--------SALCAVCLGALHPSHEVRHLGNCLHAFHKSCID 297
A++K+RLP VR++ LRS S CAVCLGAL H VR LGNC HAFHK+CID
Sbjct: 81 AAIKARLPAVRYADLRSRRCAAGATAVSTCCAVCLGALEARHRVRELGNCAHAFHKACID 140
Query: 298 KWVDVGQLTCPLCRAPLLHHQPPEDDD 378
KWVD GQ TCPLCRA LL P D D
Sbjct: 141 KWVDKGQATCPLCRALLL----PADTD 163
>gb|ACN36122.1| unknown [Zea mays] gi|413921263|gb|AFW61195.1| putative RING zinc
finger domain superfamily protein [Zea mays]
Length = 189
Score = 101 bits (252), Expect = 1e-19
Identities = 50/84 (59%), Positives = 57/84 (67%), Gaps = 5/84 (5%)
Frame = +1
Query: 142 ASVKSRLPVVRFSALRS-----DGSALCAVCLGALHPSHEVRHLGNCLHAFHKSCIDKWV 306
A++K+RLP VR++ L G A+CAVCLGAL H VR LGNC HAFHK+CIDKWV
Sbjct: 90 AAIKARLPAVRYADLLGARRAPPGPAVCAVCLGALQARHRVRELGNCAHAFHKACIDKWV 149
Query: 307 DVGQLTCPLCRAPLLHHQPPEDDD 378
D GQ TCPLCRA LL D D
Sbjct: 150 DKGQATCPLCRAFLLPGLSAGDGD 173
>ref|NP_001151265.1| LOC100284898 precursor [Zea mays] gi|195645396|gb|ACG42166.1| RING
zinc finger protein-like [Zea mays]
Length = 156
Score = 101 bits (252), Expect = 1e-19
Identities = 50/84 (59%), Positives = 57/84 (67%), Gaps = 5/84 (5%)
Frame = +1
Query: 142 ASVKSRLPVVRFSALRS-----DGSALCAVCLGALHPSHEVRHLGNCLHAFHKSCIDKWV 306
A++K+RLP VR++ L G A+CAVCLGAL H VR LGNC HAFHK+CIDKWV
Sbjct: 61 AAIKARLPAVRYADLLGARRAPPGPAVCAVCLGALQARHRVRELGNCAHAFHKACIDKWV 120
Query: 307 DVGQLTCPLCRAPLLHHQPPEDDD 378
D GQ TCPLCRA LL D D
Sbjct: 121 DKGQATCPLCRAFLLPGLSAGDGD 144
>ref|XP_004972801.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B-like [Setaria italica]
Length = 180
Score = 100 bits (249), Expect = 2e-19
Identities = 51/94 (54%), Positives = 61/94 (64%), Gaps = 5/94 (5%)
Frame = +1
Query: 142 ASVKSRLPVVRFSAL-----RSDGSALCAVCLGALHPSHEVRHLGNCLHAFHKSCIDKWV 306
A++K+RLP VR++ L +A CAVCLGAL H VR LGNC HAFHK+CIDKWV
Sbjct: 83 AAIKARLPAVRYADLLRARRAPAPAASCAVCLGALEARHRVRELGNCAHAFHKACIDKWV 142
Query: 307 DVGQLTCPLCRAPLLHHQPPEDDDEVSPRSRSTS 408
D GQ TCPLCRA LL P E++ S+S
Sbjct: 143 DKGQATCPLCRALLLPGAPDAGAGELADAFSSSS 176
>ref|NP_001061030.1| Os08g0157400 [Oryza sativa Japonica Group]
gi|37805860|dbj|BAC99511.1| unknown protein [Oryza
sativa Japonica Group] gi|113622999|dbj|BAF22944.1|
Os08g0157400 [Oryza sativa Japonica Group]
gi|149392499|gb|ABR26052.1| ring zinc finger
protein-like [Oryza sativa Indica Group]
gi|215766069|dbj|BAG98297.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 176
Score = 99.0 bits (245), Expect = 7e-19
Identities = 49/94 (52%), Positives = 61/94 (64%), Gaps = 6/94 (6%)
Frame = +1
Query: 142 ASVKSRLPVVRFSAL------RSDGSALCAVCLGALHPSHEVRHLGNCLHAFHKSCIDKW 303
A++K+RLP VR++ + +A C VCLGAL H VR LGNC HAFHK+CIDKW
Sbjct: 79 AAIKARLPAVRYADFVRCRRAAAAAAASCVVCLGALEARHRVRELGNCAHAFHKACIDKW 138
Query: 304 VDVGQLTCPLCRAPLLHHQPPEDDDEVSPRSRST 405
VD GQ TCPLCRA LL P DD + + + +T
Sbjct: 139 VDKGQATCPLCRAALL---PSADDADAAAIAATT 169
>ref|XP_002445080.1| hypothetical protein SORBIDRAFT_07g003830 [Sorghum bicolor]
gi|241941430|gb|EES14575.1| hypothetical protein
SORBIDRAFT_07g003830 [Sorghum bicolor]
Length = 189
Score = 98.6 bits (244), Expect = 8e-19
Identities = 49/80 (61%), Positives = 57/80 (71%), Gaps = 10/80 (12%)
Frame = +1
Query: 142 ASVKSRLPVVRFSAL----RSDGS------ALCAVCLGALHPSHEVRHLGNCLHAFHKSC 291
A++K+RLP VR++ L R+ S A+CAVCLGAL H VR LGNC HAFHK+C
Sbjct: 88 AAIKARLPAVRYADLLRSRRASASPPAPVPAVCAVCLGALEARHRVRELGNCAHAFHKAC 147
Query: 292 IDKWVDVGQLTCPLCRAPLL 351
IDKWVD GQ TCPLCRA LL
Sbjct: 148 IDKWVDKGQATCPLCRALLL 167
>gb|EEC81928.1| hypothetical protein OsI_25779 [Oryza sativa Indica Group]
gi|222636923|gb|EEE67055.1| hypothetical protein
OsJ_24002 [Oryza sativa Japonica Group]
Length = 146
Score = 89.0 bits (219), Expect = 7e-16
Identities = 46/79 (58%), Positives = 52/79 (65%), Gaps = 12/79 (15%)
Frame = +1
Query: 148 VKSRLPVVRFSALRS-------DGSAL-----CAVCLGALHPSHEVRHLGNCLHAFHKSC 291
+KSRLPVVRFSA S DG+A CAVCL A+ EVR LGNC HAFH C
Sbjct: 68 IKSRLPVVRFSASGSGSDGEEEDGAAAEASPRCAVCLAAVEEGAEVRQLGNCSHAFHLPC 127
Query: 292 IDKWVDVGQLTCPLCRAPL 348
ID+WVD+G TCPLCR+ L
Sbjct: 128 IDRWVDMGHFTCPLCRSLL 146
>dbj|BAJ92172.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 147
Score = 87.8 bits (216), Expect = 2e-15
Identities = 42/77 (54%), Positives = 50/77 (64%), Gaps = 9/77 (11%)
Frame = +1
Query: 148 VKSRLPVVRFSALRS---------DGSALCAVCLGALHPSHEVRHLGNCLHAFHKSCIDK 300
VK+RLP V FS L DG+A C VCL L + EVR LGNC HAFH+ CID
Sbjct: 56 VKARLPAVEFSWLARPEQQQQGCHDGAAACIVCLERLEAADEVRRLGNCAHAFHRGCIDG 115
Query: 301 WVDVGQLTCPLCRAPLL 351
W+D+G+ TCPLCR+ LL
Sbjct: 116 WIDLGRTTCPLCRSHLL 132
>ref|XP_002448380.1| hypothetical protein SORBIDRAFT_06g026310 [Sorghum bicolor]
gi|241939563|gb|EES12708.1| hypothetical protein
SORBIDRAFT_06g026310 [Sorghum bicolor]
Length = 159
Score = 86.3 bits (212), Expect = 4e-15
Identities = 40/75 (53%), Positives = 50/75 (66%), Gaps = 6/75 (8%)
Frame = +1
Query: 145 SVKSRLPVVRFSALRSDGSA------LCAVCLGALHPSHEVRHLGNCLHAFHKSCIDKWV 306
+VK RLP+V F L S S+ C VCL L + EVR LGNC HAFH CID+W+
Sbjct: 69 AVKQRLPLVEFLELSSSSSSSGAAEPTCRVCLERLEATDEVRRLGNCTHAFHTRCIDRWI 128
Query: 307 DVGQLTCPLCRAPLL 351
D+G++TCPLCR+ LL
Sbjct: 129 DLGEVTCPLCRSHLL 143
>emb|CAN67364.1| hypothetical protein VITISV_033303 [Vitis vinifera]
Length = 110
Score = 86.3 bits (212), Expect = 4e-15
Identities = 42/84 (50%), Positives = 51/84 (60%), Gaps = 6/84 (7%)
Frame = +1
Query: 148 VKSRLPVVRFSAL------RSDGSALCAVCLGALHPSHEVRHLGNCLHAFHKSCIDKWVD 309
+K +L VV +S L +G + CAVCL + HEVR LGNC H FHK CID W+D
Sbjct: 1 MKDQLRVVEYSPLLDESKAXKEGDSQCAVCLNIIGEXHEVRELGNCCHVFHKECIDAWMD 60
Query: 310 VGQLTCPLCRAPLLHHQPPEDDDE 381
GQ TCPLCR+ L+ P DDE
Sbjct: 61 QGQATCPLCRSKLM----PAGDDE 80
>gb|ACR36207.1| unknown [Zea mays] gi|413938264|gb|AFW72815.1| putative RING zinc
finger domain superfamily protein [Zea mays]
Length = 154
Score = 85.9 bits (211), Expect = 6e-15
Identities = 38/74 (51%), Positives = 51/74 (68%), Gaps = 6/74 (8%)
Frame = +1
Query: 148 VKSRLPVVRFSALRSDGS------ALCAVCLGALHPSHEVRHLGNCLHAFHKSCIDKWVD 309
VK+RLP V ++ L ++ A C VCL L + EVR LGNC HAFH++CID+W+D
Sbjct: 56 VKTRLPAVEYAQLLAEQQPSPATHAACIVCLDTLEAADEVRRLGNCAHAFHRACIDRWID 115
Query: 310 VGQLTCPLCRAPLL 351
+G+ TCPLCR+ LL
Sbjct: 116 LGRTTCPLCRSDLL 129
>ref|NP_001148352.1| protein binding protein [Zea mays] gi|195618276|gb|ACG30968.1|
protein binding protein [Zea mays]
Length = 154
Score = 85.9 bits (211), Expect = 6e-15
Identities = 38/74 (51%), Positives = 51/74 (68%), Gaps = 6/74 (8%)
Frame = +1
Query: 148 VKSRLPVVRFSALRSDGS------ALCAVCLGALHPSHEVRHLGNCLHAFHKSCIDKWVD 309
VK+RLP V ++ L ++ A C VCL L + EVR LGNC HAFH++CID+W+D
Sbjct: 56 VKTRLPAVEYAQLLAEQQPSPATHAACIVCLDTLEAADEVRRLGNCAHAFHRACIDRWID 115
Query: 310 VGQLTCPLCRAPLL 351
+G+ TCPLCR+ LL
Sbjct: 116 LGRTTCPLCRSDLL 129
>gb|ACR37714.1| unknown [Zea mays] gi|413938259|gb|AFW72810.1| putative RING zinc
finger domain superfamily protein [Zea mays]
Length = 199
Score = 85.1 bits (209), Expect = 1e-14
Identities = 42/85 (49%), Positives = 52/85 (61%), Gaps = 2/85 (2%)
Frame = +1
Query: 142 ASVKSRLPVVRFSAL--RSDGSALCAVCLGALHPSHEVRHLGNCLHAFHKSCIDKWVDVG 315
A ++ LPVVRF L + G CAVCLG + EVR LGNC HAFH++C+D+W+
Sbjct: 90 ALIEEALPVVRFDELCGAACGGGDCAVCLGGIGGGDEVRRLGNCRHAFHRACLDRWMAHD 149
Query: 316 QLTCPLCRAPLLHHQPPEDDDEVSP 390
Q TCPLCRAPL+ D D P
Sbjct: 150 QRTCPLCRAPLIPWAADADYDMSYP 174
>gb|AFG58067.1| hypothetical protein 0_13343_01, partial [Pinus taeda]
Length = 102
Score = 84.7 bits (208), Expect = 1e-14
Identities = 40/88 (45%), Positives = 53/88 (60%), Gaps = 3/88 (3%)
Frame = +1
Query: 148 VKSRLPVVRFSALRS---DGSALCAVCLGALHPSHEVRHLGNCLHAFHKSCIDKWVDVGQ 318
++ LPVV F L DG +CAVCL + E+R L NC H FH+ C+DKW+D Q
Sbjct: 2 IRDLLPVVEFGVLAEGAEDGDVMCAVCLNNMEKFEEIRRLTNCRHIFHRGCLDKWLDHDQ 61
Query: 319 LTCPLCRAPLLHHQPPEDDDEVSPRSRS 402
TCPLCR+PLL P E + E++ R+
Sbjct: 62 RTCPLCRSPLL---PDEIEREINVELRT 86
>gb|ACG28545.1| protein binding protein [Zea mays]
Length = 159
Score = 83.2 bits (204), Expect = 4e-14
Identities = 41/88 (46%), Positives = 52/88 (59%), Gaps = 16/88 (18%)
Frame = +1
Query: 148 VKSRLPVVRFSALRS-------------DGSAL---CAVCLGALHPSHEVRHLGNCLHAF 279
VK+RLP V + L + DG A C VCL L + EVR LGNC HAF
Sbjct: 57 VKARLPAVEYGQLLAEHDEQQQSGDHDCDGDAASSDCIVCLETLEAADEVRRLGNCAHAF 116
Query: 280 HKSCIDKWVDVGQLTCPLCRAPLLHHQP 363
H++CID+W+D+G+ TCPLCR+ LL P
Sbjct: 117 HRACIDRWIDLGRATCPLCRSDLLPRAP 144
>ref|NP_001137079.1| LOC100217252 [Zea mays] gi|194698258|gb|ACF83213.1| unknown [Zea
mays] gi|413923455|gb|AFW63387.1| putative RING zinc
finger domain superfamily protein [Zea mays]
Length = 160
Score = 83.2 bits (204), Expect = 4e-14
Identities = 41/88 (46%), Positives = 52/88 (59%), Gaps = 16/88 (18%)
Frame = +1
Query: 148 VKSRLPVVRFSALRS-------------DGSAL---CAVCLGALHPSHEVRHLGNCLHAF 279
VK+RLP V + L + DG A C VCL L + EVR LGNC HAF
Sbjct: 58 VKARLPAVEYGQLLAEHDEQQQSGDHDCDGDAASSDCIVCLETLEAADEVRRLGNCAHAF 117
Query: 280 HKSCIDKWVDVGQLTCPLCRAPLLHHQP 363
H++CID+W+D+G+ TCPLCR+ LL P
Sbjct: 118 HRACIDRWIDLGRATCPLCRSDLLPRAP 145
>ref|XP_002518941.1| hypothetical protein RCOM_1314350 [Ricinus communis]
gi|223541928|gb|EEF43474.1| hypothetical protein
RCOM_1314350 [Ricinus communis]
Length = 274
Score = 82.8 bits (203), Expect = 5e-14
Identities = 38/75 (50%), Positives = 50/75 (66%), Gaps = 6/75 (8%)
Frame = +1
Query: 142 ASVKSRLPVVRFSALRS------DGSALCAVCLGALHPSHEVRHLGNCLHAFHKSCIDKW 303
A VK RL V +FS++ S D +C VCL +++ +HE+R L NC H FHK C+D W
Sbjct: 76 ALVKKRLVVRKFSSILSRLGKDEDEVCMCPVCLDSINKTHEIRELCNCAHVFHKECLDTW 135
Query: 304 VDVGQLTCPLCRAPL 348
VD GQ+TCPLCR+ L
Sbjct: 136 VDEGQVTCPLCRSML 150
>ref|NP_001150893.1| RING zinc finger protein-like [Zea mays]
gi|195642704|gb|ACG40820.1| RING zinc finger
protein-like [Zea mays]
Length = 203
Score = 82.4 bits (202), Expect = 6e-14
Identities = 41/85 (48%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
Frame = +1
Query: 142 ASVKSRLPVVRFSALRSD--GSALCAVCLGALHPSHEVRHLGNCLHAFHKSCIDKWVDVG 315
A ++ LPVVRF L G CAVCL + EVR LGNC HAFH++C+D+W+
Sbjct: 94 ALIEEALPVVRFDELGGAPCGGGDCAVCLSGIGGGDEVRRLGNCRHAFHRACLDRWMAHD 153
Query: 316 QLTCPLCRAPLLHHQPPEDDDEVSP 390
Q TCPLCRAPL+ D D P
Sbjct: 154 QRTCPLCRAPLIPWAADADYDMSYP 178