BLASTX nr result
ID: Zingiber24_contig00004241
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00004241
(498 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006649485.1| PREDICTED: mitochondrial tRNA-specific 2-thi... 70 2e-10
gb|EEE58416.1| hypothetical protein OsJ_09614 [Oryza sativa Japo... 69 5e-10
gb|EEC74610.1| hypothetical protein OsI_10221 [Oryza sativa Indi... 69 7e-10
ref|NP_001049129.1| Os03g0174600 [Oryza sativa Japonica Group] g... 69 7e-10
gb|EOY32661.1| Transferases,tRNA-methyltransferases [Theobroma c... 68 1e-09
ref|XP_003558694.1| PREDICTED: tRNA-specific 2-thiouridylase mnm... 68 1e-09
dbj|BAK01046.1| predicted protein [Hordeum vulgare subsp. vulgare] 67 3e-09
gb|EMT11416.1| tRNA-specific 2-thiouridylase mnmA [Aegilops taus... 66 4e-09
ref|XP_002468413.1| hypothetical protein SORBIDRAFT_01g045520 [S... 66 4e-09
ref|XP_004985520.1| PREDICTED: mitochondrial tRNA-specific 2-thi... 65 7e-09
tpg|DAA43648.1| TPA: hypothetical protein ZEAMMB73_761275 [Zea m... 64 2e-08
gb|ACN25178.1| unknown [Zea mays] gi|414865090|tpg|DAA43647.1| T... 64 2e-08
ref|NP_001131207.1| uncharacterized protein LOC100192515 [Zea ma... 64 2e-08
gb|ACG45558.1| tRNA methyltransferase [Zea mays] 64 2e-08
ref|XP_002298404.2| hypothetical protein POPTR_0001s26620g [Popu... 63 4e-08
gb|EPS68247.1| hypothetical protein M569_06524 [Genlisea aurea] 62 6e-08
ref|XP_004507093.1| PREDICTED: tRNA-specific 2-thiouridylase Mnm... 62 6e-08
ref|XP_002513510.1| tRNA (5-methylaminomethyl-2-thiouridylate)-m... 62 6e-08
emb|CBI16383.3| unnamed protein product [Vitis vinifera] 61 1e-07
ref|XP_002282827.1| PREDICTED: tRNA-specific 2-thiouridylase mnm... 61 1e-07
>ref|XP_006649485.1| PREDICTED: mitochondrial tRNA-specific 2-thiouridylase 1-like
[Oryza brachyantha]
Length = 489
Score = 70.5 bits (171), Expect = 2e-10
Identities = 34/51 (66%), Positives = 38/51 (74%)
Frame = +2
Query: 179 YVAEKFVHNNVAS*SRNYFSLNKRRLTFRVESLNWFSGSSPIKARQLQCKI 331
YV EK V NNV SRNY+SL+KRR TFRV SLNWFS S PI QL+CK+
Sbjct: 335 YVVEKDVKNNVVFVSRNYYSLDKRRRTFRVGSLNWFSNSGPINNEQLKCKV 385
>gb|EEE58416.1| hypothetical protein OsJ_09614 [Oryza sativa Japonica Group]
Length = 410
Score = 69.3 bits (168), Expect = 5e-10
Identities = 36/59 (61%), Positives = 41/59 (69%)
Frame = +2
Query: 179 YVAEKFVHNNVAS*SRNYFSLNKRRLTFRVESLNWFSGSSPIKARQLQCKIVSTNLVGS 355
YV EK V NNV SRNY+SL+KRR TFRV SLNWFS S P QL+CK+ L+GS
Sbjct: 334 YVVEKGVQNNVVFVSRNYYSLDKRRRTFRVGSLNWFSNSGPTNNEQLKCKLF-FELIGS 391
>gb|EEC74610.1| hypothetical protein OsI_10221 [Oryza sativa Indica Group]
Length = 488
Score = 68.9 bits (167), Expect = 7e-10
Identities = 33/51 (64%), Positives = 37/51 (72%)
Frame = +2
Query: 179 YVAEKFVHNNVAS*SRNYFSLNKRRLTFRVESLNWFSGSSPIKARQLQCKI 331
YV EK V NNV SRNY+SL+KRR TFRV SLNWFS S P QL+CK+
Sbjct: 334 YVVEKDVQNNVVFVSRNYYSLDKRRRTFRVGSLNWFSNSGPTNNEQLKCKV 384
>ref|NP_001049129.1| Os03g0174600 [Oryza sativa Japonica Group]
gi|108706458|gb|ABF94253.1| tRNA methyl transferase
family protein, expressed [Oryza sativa Japonica Group]
gi|113547600|dbj|BAF11043.1| Os03g0174600 [Oryza sativa
Japonica Group] gi|215737060|dbj|BAG95989.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 488
Score = 68.9 bits (167), Expect = 7e-10
Identities = 33/51 (64%), Positives = 37/51 (72%)
Frame = +2
Query: 179 YVAEKFVHNNVAS*SRNYFSLNKRRLTFRVESLNWFSGSSPIKARQLQCKI 331
YV EK V NNV SRNY+SL+KRR TFRV SLNWFS S P QL+CK+
Sbjct: 334 YVVEKGVQNNVVFVSRNYYSLDKRRRTFRVGSLNWFSNSGPTNNEQLKCKV 384
>gb|EOY32661.1| Transferases,tRNA-methyltransferases [Theobroma cacao]
Length = 1075
Score = 68.2 bits (165), Expect = 1e-09
Identities = 37/70 (52%), Positives = 46/70 (65%)
Frame = +2
Query: 179 YVAEKFVHNNVAS*SRNYFSLNKRRLTFRVESLNWFSGSSPIKARQLQCKIVSTNLVGSL 358
YV EK V NNV SRNYFSL+KRR FRV SL W SGS P +QLQCK++ + + S+
Sbjct: 337 YVVEKDVENNVVFVSRNYFSLDKRRRLFRVGSLKWLSGSPPNHIKQLQCKVLQSYTLLSV 396
Query: 359 IRMK*FISWS 388
+ IS+S
Sbjct: 397 TTVVIPISYS 406
>ref|XP_003558694.1| PREDICTED: tRNA-specific 2-thiouridylase mnmA-like [Brachypodium
distachyon]
Length = 481
Score = 67.8 bits (164), Expect = 1e-09
Identities = 33/51 (64%), Positives = 37/51 (72%)
Frame = +2
Query: 179 YVAEKFVHNNVAS*SRNYFSLNKRRLTFRVESLNWFSGSSPIKARQLQCKI 331
YV EK V NNV SRNY+SL+KRR TFRV SLNWFS S P QL+CK+
Sbjct: 327 YVVEKDVQNNVVFVSRNYYSLDKRRRTFRVGSLNWFSDSGPENDEQLKCKV 377
>dbj|BAK01046.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 491
Score = 66.6 bits (161), Expect = 3e-09
Identities = 32/51 (62%), Positives = 37/51 (72%)
Frame = +2
Query: 179 YVAEKFVHNNVAS*SRNYFSLNKRRLTFRVESLNWFSGSSPIKARQLQCKI 331
YV EK V NNV SRNY+SL+KRR TFRV SLNWFS S P +L+CK+
Sbjct: 331 YVVEKDVQNNVVFVSRNYYSLDKRRRTFRVGSLNWFSDSGPADNERLKCKV 381
>gb|EMT11416.1| tRNA-specific 2-thiouridylase mnmA [Aegilops tauschii]
Length = 552
Score = 66.2 bits (160), Expect = 4e-09
Identities = 32/51 (62%), Positives = 37/51 (72%)
Frame = +2
Query: 179 YVAEKFVHNNVAS*SRNYFSLNKRRLTFRVESLNWFSGSSPIKARQLQCKI 331
YV EK V NNV SRNY+SL+KRR TFRV SLNWFS S P +L+CK+
Sbjct: 331 YVVEKDVQNNVVFVSRNYYSLDKRRRTFRVGSLNWFSDSGPSDNERLKCKV 381
>ref|XP_002468413.1| hypothetical protein SORBIDRAFT_01g045520 [Sorghum bicolor]
gi|241922267|gb|EER95411.1| hypothetical protein
SORBIDRAFT_01g045520 [Sorghum bicolor]
Length = 489
Score = 66.2 bits (160), Expect = 4e-09
Identities = 32/51 (62%), Positives = 36/51 (70%)
Frame = +2
Query: 179 YVAEKFVHNNVAS*SRNYFSLNKRRLTFRVESLNWFSGSSPIKARQLQCKI 331
YV EK V NNV SRNY+SL+KRR TFRV SLNWF S P QL+CK+
Sbjct: 334 YVVEKDVQNNVVFVSRNYYSLDKRRRTFRVGSLNWFDSSGPGNNEQLKCKV 384
>ref|XP_004985520.1| PREDICTED: mitochondrial tRNA-specific 2-thiouridylase 1-like
[Setaria italica]
Length = 488
Score = 65.5 bits (158), Expect = 7e-09
Identities = 31/51 (60%), Positives = 37/51 (72%)
Frame = +2
Query: 179 YVAEKFVHNNVAS*SRNYFSLNKRRLTFRVESLNWFSGSSPIKARQLQCKI 331
YV EK V NNV SRNY+SL+KRR TFRV SLNWF S P + +L+CK+
Sbjct: 334 YVVEKDVQNNVVFVSRNYYSLDKRRRTFRVGSLNWFDDSGPGNSERLKCKV 384
>tpg|DAA43648.1| TPA: hypothetical protein ZEAMMB73_761275 [Zea mays]
Length = 226
Score = 64.3 bits (155), Expect = 2e-08
Identities = 31/51 (60%), Positives = 35/51 (68%)
Frame = +2
Query: 179 YVAEKFVHNNVAS*SRNYFSLNKRRLTFRVESLNWFSGSSPIKARQLQCKI 331
YV EK V NNV SRNY+SL+KRR TFRV SLNWF P QL+CK+
Sbjct: 71 YVVEKDVQNNVVFVSRNYYSLDKRRRTFRVGSLNWFDNCGPGNNEQLKCKV 121
>gb|ACN25178.1| unknown [Zea mays] gi|414865090|tpg|DAA43647.1| TPA: hypothetical
protein ZEAMMB73_761275 [Zea mays]
Length = 329
Score = 64.3 bits (155), Expect = 2e-08
Identities = 31/51 (60%), Positives = 35/51 (68%)
Frame = +2
Query: 179 YVAEKFVHNNVAS*SRNYFSLNKRRLTFRVESLNWFSGSSPIKARQLQCKI 331
YV EK V NNV SRNY+SL+KRR TFRV SLNWF P QL+CK+
Sbjct: 174 YVVEKDVQNNVVFVSRNYYSLDKRRRTFRVGSLNWFDNCGPGNNEQLKCKV 224
>ref|NP_001131207.1| uncharacterized protein LOC100192515 [Zea mays]
gi|194690872|gb|ACF79520.1| unknown [Zea mays]
gi|414865088|tpg|DAA43645.1| TPA: tRNA methyltransferase
[Zea mays]
Length = 486
Score = 64.3 bits (155), Expect = 2e-08
Identities = 31/51 (60%), Positives = 35/51 (68%)
Frame = +2
Query: 179 YVAEKFVHNNVAS*SRNYFSLNKRRLTFRVESLNWFSGSSPIKARQLQCKI 331
YV EK V NNV SRNY+SL+KRR TFRV SLNWF P QL+CK+
Sbjct: 331 YVVEKDVQNNVVFVSRNYYSLDKRRRTFRVGSLNWFDNCGPGNNEQLKCKV 381
>gb|ACG45558.1| tRNA methyltransferase [Zea mays]
Length = 486
Score = 63.9 bits (154), Expect = 2e-08
Identities = 31/51 (60%), Positives = 35/51 (68%)
Frame = +2
Query: 179 YVAEKFVHNNVAS*SRNYFSLNKRRLTFRVESLNWFSGSSPIKARQLQCKI 331
YV EK V NNV SRNY+SL+KRR TFRV SLNWF P QL+CK+
Sbjct: 331 YVVEKDVQNNVVFVSRNYYSLDKRRRTFRVGSLNWFDNFGPGNNEQLKCKV 381
>ref|XP_002298404.2| hypothetical protein POPTR_0001s26620g [Populus trichocarpa]
gi|550348245|gb|EEE83209.2| hypothetical protein
POPTR_0001s26620g [Populus trichocarpa]
Length = 512
Score = 63.2 bits (152), Expect = 4e-08
Identities = 32/51 (62%), Positives = 35/51 (68%)
Frame = +2
Query: 179 YVAEKFVHNNVAS*SRNYFSLNKRRLTFRVESLNWFSGSSPIKARQLQCKI 331
YV EK V NNV SRNYFSL+KRR +FRV SL W SGS QLQCK+
Sbjct: 342 YVVEKDVKNNVVFVSRNYFSLDKRRRSFRVGSLKWLSGSPTDMTTQLQCKV 392
>gb|EPS68247.1| hypothetical protein M569_06524 [Genlisea aurea]
Length = 151
Score = 62.4 bits (150), Expect = 6e-08
Identities = 29/51 (56%), Positives = 35/51 (68%)
Frame = +2
Query: 179 YVAEKFVHNNVAS*SRNYFSLNKRRLTFRVESLNWFSGSSPIKARQLQCKI 331
YV EK V NNV SRNYFS++KRR FR SL WF GS P R+++CK+
Sbjct: 9 YVVEKDVENNVVFVSRNYFSVDKRRRVFRAGSLRWFGGSPPRPRRRIRCKV 59
>ref|XP_004507093.1| PREDICTED: tRNA-specific 2-thiouridylase MnmA-like [Cicer
arietinum]
Length = 484
Score = 62.4 bits (150), Expect = 6e-08
Identities = 30/51 (58%), Positives = 35/51 (68%)
Frame = +2
Query: 179 YVAEKFVHNNVAS*SRNYFSLNKRRLTFRVESLNWFSGSSPIKARQLQCKI 331
YV EK V NNV SRNYFS++KRR FRV SL W SG P + QL+CK+
Sbjct: 325 YVVEKDVKNNVVFVSRNYFSIDKRRRVFRVGSLKWLSGLPPSQTSQLRCKV 375
>ref|XP_002513510.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase,
putative [Ricinus communis] gi|223547418|gb|EEF48913.1|
tRNA
(5-methylaminomethyl-2-thiouridylate)-methyltransferase,
putative [Ricinus communis]
Length = 497
Score = 62.4 bits (150), Expect = 6e-08
Identities = 30/51 (58%), Positives = 35/51 (68%)
Frame = +2
Query: 179 YVAEKFVHNNVAS*SRNYFSLNKRRLTFRVESLNWFSGSSPIKARQLQCKI 331
YV EK V NNV SRNYFS +KRR RV SL WF+GS P + +LQCK+
Sbjct: 327 YVVEKDVKNNVVFVSRNYFSFDKRRRLLRVGSLRWFNGSPPKETSELQCKV 377
>emb|CBI16383.3| unnamed protein product [Vitis vinifera]
Length = 544
Score = 61.2 bits (147), Expect = 1e-07
Identities = 31/51 (60%), Positives = 34/51 (66%)
Frame = +2
Query: 179 YVAEKFVHNNVAS*SRNYFSLNKRRLTFRVESLNWFSGSSPIKARQLQCKI 331
YV EK V NNV SRNYFSL+KRR FRV SL W S P + QLQCK+
Sbjct: 344 YVVEKDVKNNVVFVSRNYFSLDKRRRLFRVGSLKWISREPPGQINQLQCKV 394
>ref|XP_002282827.1| PREDICTED: tRNA-specific 2-thiouridylase mnmA-like [Vitis vinifera]
Length = 540
Score = 61.2 bits (147), Expect = 1e-07
Identities = 31/51 (60%), Positives = 34/51 (66%)
Frame = +2
Query: 179 YVAEKFVHNNVAS*SRNYFSLNKRRLTFRVESLNWFSGSSPIKARQLQCKI 331
YV EK V NNV SRNYFSL+KRR FRV SL W S P + QLQCK+
Sbjct: 340 YVVEKDVKNNVVFVSRNYFSLDKRRRLFRVGSLKWISREPPGQINQLQCKV 390