BLASTX nr result
ID: Zingiber24_contig00004208
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00004208
(805 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002531290.1| protein with unknown function [Ricinus commu... 90 1e-15
gb|EMJ09342.1| hypothetical protein PRUPE_ppa000128mg [Prunus pe... 89 2e-15
ref|XP_006604844.1| PREDICTED: mediator of RNA polymerase II tra... 89 2e-15
ref|XP_006577285.1| PREDICTED: mediator of RNA polymerase II tra... 88 3e-15
ref|XP_006347747.1| PREDICTED: mediator of RNA polymerase II tra... 86 1e-14
ref|XP_004230096.1| PREDICTED: mediator of RNA polymerase II tra... 86 1e-14
ref|XP_004171233.1| PREDICTED: mediator of RNA polymerase II tra... 85 3e-14
ref|XP_004139381.1| PREDICTED: mediator of RNA polymerase II tra... 85 3e-14
emb|CBI34155.3| unnamed protein product [Vitis vinifera] 83 1e-13
ref|XP_002279923.1| PREDICTED: uncharacterized protein LOC100267... 83 1e-13
gb|ESW19166.1| hypothetical protein PHAVU_006G101900g [Phaseolus... 82 2e-13
ref|XP_004494701.1| PREDICTED: mediator of RNA polymerase II tra... 82 2e-13
ref|XP_004494700.1| PREDICTED: mediator of RNA polymerase II tra... 82 2e-13
gb|EXB93237.1| GDP-mannose 3,5-epimerase 1 [Morus notabilis] 82 2e-13
ref|XP_006432925.1| hypothetical protein CICLE_v10000014mg [Citr... 82 2e-13
gb|EOY11072.1| Mediator of RNA polymerase II transcription subun... 82 2e-13
ref|XP_003577926.1| PREDICTED: uncharacterized protein LOC100829... 82 2e-13
ref|NP_187125.1| mediator of RNA polymerase II transcription sub... 81 5e-13
ref|XP_006408156.1| hypothetical protein EUTSA_v10019885mg [Eutr... 81 5e-13
ref|XP_004973225.1| PREDICTED: mediator of RNA polymerase II tra... 81 5e-13
>ref|XP_002531290.1| protein with unknown function [Ricinus communis]
gi|223529123|gb|EEF31103.1| protein with unknown function
[Ricinus communis]
Length = 1746
Score = 89.7 bits (221), Expect = 1e-15
Identities = 40/80 (50%), Positives = 55/80 (68%)
Frame = +2
Query: 5 HVSFRGMEGSHGGRACWLRLEDWENCQNRMAKTAEYANGNPAGDISQGRLRLVADAXXXX 184
+V+F GMEGSHGGRACWLR++DWE C+ R+ +T E NG+ GD++QGRLR+VAD+
Sbjct: 1668 NVTFLGMEGSHGGRACWLRIDDWEKCKQRVIRTVE-VNGSTTGDVAQGRLRMVADSVQRT 1726
Query: 185 XXXXXXXXKDGVISSSSNGT 244
+DG ++ SS T
Sbjct: 1727 LHMCLQGLRDGGVTGSSGAT 1746
>gb|EMJ09342.1| hypothetical protein PRUPE_ppa000128mg [Prunus persica]
Length = 1716
Score = 89.0 bits (219), Expect = 2e-15
Identities = 43/79 (54%), Positives = 55/79 (69%)
Frame = +2
Query: 5 HVSFRGMEGSHGGRACWLRLEDWENCQNRMAKTAEYANGNPAGDISQGRLRLVADAXXXX 184
+VSF GMEGSHGGRACWLR++DWE C+N++A+T E NG+ GD SQGRLR+VAD
Sbjct: 1637 NVSFLGMEGSHGGRACWLRIDDWEKCKNKVARTVE-LNGSSGGDSSQGRLRIVADYVQRT 1695
Query: 185 XXXXXXXXKDGVISSSSNG 241
+DG S+S+G
Sbjct: 1696 LHMWLQGLRDGGGVSASSG 1714
>ref|XP_006604844.1| PREDICTED: mediator of RNA polymerase II transcription subunit
14-like [Glycine max]
Length = 1806
Score = 88.6 bits (218), Expect = 2e-15
Identities = 42/79 (53%), Positives = 55/79 (69%)
Frame = +2
Query: 5 HVSFRGMEGSHGGRACWLRLEDWENCQNRMAKTAEYANGNPAGDISQGRLRLVADAXXXX 184
+VSF GM GSHGGRACWLR++DWE C+ R+A+T E NGN A D+SQGRL+LVAD+
Sbjct: 1727 NVSFIGMNGSHGGRACWLRVDDWEKCKQRVARTVE-VNGNSAADVSQGRLKLVADSVQRN 1785
Query: 185 XXXXXXXXKDGVISSSSNG 241
+DG ++S+G
Sbjct: 1786 LHMCIQGLRDGSGVTASSG 1804
>ref|XP_006577285.1| PREDICTED: mediator of RNA polymerase II transcription subunit
14-like [Glycine max]
Length = 1814
Score = 88.2 bits (217), Expect = 3e-15
Identities = 41/79 (51%), Positives = 55/79 (69%)
Frame = +2
Query: 5 HVSFRGMEGSHGGRACWLRLEDWENCQNRMAKTAEYANGNPAGDISQGRLRLVADAXXXX 184
+VSF GM GSHGGRACWLR++DWE C+ R+A+T E NGN A D+SQGRL+L+AD+
Sbjct: 1735 NVSFIGMNGSHGGRACWLRVDDWEKCKQRVARTVE-VNGNSAADVSQGRLKLIADSVQRN 1793
Query: 185 XXXXXXXXKDGVISSSSNG 241
+DG ++S+G
Sbjct: 1794 LHMCIQGLRDGSGVTTSSG 1812
>ref|XP_006347747.1| PREDICTED: mediator of RNA polymerase II transcription subunit
14-like [Solanum tuberosum]
Length = 1791
Score = 86.3 bits (212), Expect = 1e-14
Identities = 40/71 (56%), Positives = 50/71 (70%)
Frame = +2
Query: 5 HVSFRGMEGSHGGRACWLRLEDWENCQNRMAKTAEYANGNPAGDISQGRLRLVADAXXXX 184
+V F GMEGSHGGRACWLR++DWE C+ R+A+T E NGN AGD +QGRLR+VAD+
Sbjct: 1713 NVLFLGMEGSHGGRACWLRVDDWERCKQRVARTVE-VNGNSAGDANQGRLRVVADSVQRT 1771
Query: 185 XXXXXXXXKDG 217
+DG
Sbjct: 1772 LHAYLQGLRDG 1782
>ref|XP_004230096.1| PREDICTED: mediator of RNA polymerase II transcription subunit
14-like [Solanum lycopersicum]
Length = 1758
Score = 86.3 bits (212), Expect = 1e-14
Identities = 40/71 (56%), Positives = 50/71 (70%)
Frame = +2
Query: 5 HVSFRGMEGSHGGRACWLRLEDWENCQNRMAKTAEYANGNPAGDISQGRLRLVADAXXXX 184
+V F GMEGSHGGRACWLR++DWE C+ R+A+T E NGN AGD +QGRLR+VAD+
Sbjct: 1680 NVLFLGMEGSHGGRACWLRVDDWERCKQRVARTVE-VNGNSAGDANQGRLRVVADSVQRT 1738
Query: 185 XXXXXXXXKDG 217
+DG
Sbjct: 1739 LHAYLQGLRDG 1749
>ref|XP_004171233.1| PREDICTED: mediator of RNA polymerase II transcription subunit
14-like, partial [Cucumis sativus]
Length = 1332
Score = 84.7 bits (208), Expect = 3e-14
Identities = 37/54 (68%), Positives = 46/54 (85%)
Frame = +2
Query: 8 VSFRGMEGSHGGRACWLRLEDWENCQNRMAKTAEYANGNPAGDISQGRLRLVAD 169
VSF GMEGSHGGRACWLR++DWE C+ R+A+T E +G+ GD+SQGRLR+VAD
Sbjct: 1253 VSFLGMEGSHGGRACWLRVDDWEKCKQRVARTVE-VSGSSTGDVSQGRLRIVAD 1305
>ref|XP_004139381.1| PREDICTED: mediator of RNA polymerase II transcription subunit
14-like [Cucumis sativus]
Length = 1800
Score = 84.7 bits (208), Expect = 3e-14
Identities = 37/54 (68%), Positives = 46/54 (85%)
Frame = +2
Query: 8 VSFRGMEGSHGGRACWLRLEDWENCQNRMAKTAEYANGNPAGDISQGRLRLVAD 169
VSF GMEGSHGGRACWLR++DWE C+ R+A+T E +G+ GD+SQGRLR+VAD
Sbjct: 1721 VSFLGMEGSHGGRACWLRVDDWEKCKQRVARTVE-VSGSSTGDVSQGRLRIVAD 1773
>emb|CBI34155.3| unnamed protein product [Vitis vinifera]
Length = 1724
Score = 83.2 bits (204), Expect = 1e-13
Identities = 39/78 (50%), Positives = 54/78 (69%)
Frame = +2
Query: 8 VSFRGMEGSHGGRACWLRLEDWENCQNRMAKTAEYANGNPAGDISQGRLRLVADAXXXXX 187
VSF GMEGSHGGRACWLR++DWE C++R+ +T E + +P GD+SQGRL++VAD
Sbjct: 1646 VSFLGMEGSHGGRACWLRIDDWEKCKHRVVRTVEMSGCSP-GDMSQGRLKIVADNVQRAL 1704
Query: 188 XXXXXXXKDGVISSSSNG 241
+DG +S++G
Sbjct: 1705 HVNLQGLRDGSGVASNSG 1722
>ref|XP_002279923.1| PREDICTED: uncharacterized protein LOC100267561 [Vitis vinifera]
Length = 1758
Score = 83.2 bits (204), Expect = 1e-13
Identities = 39/78 (50%), Positives = 54/78 (69%)
Frame = +2
Query: 8 VSFRGMEGSHGGRACWLRLEDWENCQNRMAKTAEYANGNPAGDISQGRLRLVADAXXXXX 187
VSF GMEGSHGGRACWLR++DWE C++R+ +T E + +P GD+SQGRL++VAD
Sbjct: 1680 VSFLGMEGSHGGRACWLRIDDWEKCKHRVVRTVEMSGCSP-GDMSQGRLKIVADNVQRAL 1738
Query: 188 XXXXXXXKDGVISSSSNG 241
+DG +S++G
Sbjct: 1739 HVNLQGLRDGSGVASNSG 1756
>gb|ESW19166.1| hypothetical protein PHAVU_006G101900g [Phaseolus vulgaris]
Length = 1815
Score = 82.4 bits (202), Expect = 2e-13
Identities = 39/80 (48%), Positives = 54/80 (67%)
Frame = +2
Query: 2 AHVSFRGMEGSHGGRACWLRLEDWENCQNRMAKTAEYANGNPAGDISQGRLRLVADAXXX 181
++VSF M GSHGGRACWLR++DWE C+ R+A+ E NG+ A D+SQGRL+LVAD+
Sbjct: 1735 SNVSFVAMNGSHGGRACWLRVDDWEKCKQRVARAVE-VNGSSAADVSQGRLKLVADSVQR 1793
Query: 182 XXXXXXXXXKDGVISSSSNG 241
+DG ++S+G
Sbjct: 1794 NLHMCIQGLRDGNGVTTSSG 1813
>ref|XP_004494701.1| PREDICTED: mediator of RNA polymerase II transcription subunit
14-like isoform X2 [Cicer arietinum]
Length = 1798
Score = 82.4 bits (202), Expect = 2e-13
Identities = 39/79 (49%), Positives = 53/79 (67%)
Frame = +2
Query: 5 HVSFRGMEGSHGGRACWLRLEDWENCQNRMAKTAEYANGNPAGDISQGRLRLVADAXXXX 184
+VSF GM GSHGGRACW R++DWE C+ R+A+T E N + A D+SQGRL+LVAD+
Sbjct: 1719 NVSFLGMNGSHGGRACWSRVDDWEKCKQRVARTVE-VNASSAADVSQGRLKLVADSVQRN 1777
Query: 185 XXXXXXXXKDGVISSSSNG 241
+DG ++S+G
Sbjct: 1778 LQMCIQGLRDGSGVTASSG 1796
>ref|XP_004494700.1| PREDICTED: mediator of RNA polymerase II transcription subunit
14-like isoform X1 [Cicer arietinum]
Length = 1799
Score = 82.4 bits (202), Expect = 2e-13
Identities = 39/79 (49%), Positives = 53/79 (67%)
Frame = +2
Query: 5 HVSFRGMEGSHGGRACWLRLEDWENCQNRMAKTAEYANGNPAGDISQGRLRLVADAXXXX 184
+VSF GM GSHGGRACW R++DWE C+ R+A+T E N + A D+SQGRL+LVAD+
Sbjct: 1720 NVSFLGMNGSHGGRACWSRVDDWEKCKQRVARTVE-VNASSAADVSQGRLKLVADSVQRN 1778
Query: 185 XXXXXXXXKDGVISSSSNG 241
+DG ++S+G
Sbjct: 1779 LQMCIQGLRDGSGVTASSG 1797
>gb|EXB93237.1| GDP-mannose 3,5-epimerase 1 [Morus notabilis]
Length = 2195
Score = 82.0 bits (201), Expect = 2e-13
Identities = 39/80 (48%), Positives = 54/80 (67%)
Frame = +2
Query: 5 HVSFRGMEGSHGGRACWLRLEDWENCQNRMAKTAEYANGNPAGDISQGRLRLVADAXXXX 184
+VSF GM+GSHGGRACW R++DWE C+ R+A+T E +G+ GD +QGRLRLVAD
Sbjct: 1740 NVSFLGMDGSHGGRACWFRVDDWEKCKQRIARTVE-GSGSSPGDTNQGRLRLVADNVQRT 1798
Query: 185 XXXXXXXXKDGVISSSSNGT 244
+DG ++S+G+
Sbjct: 1799 LNLSLQWLRDGGGVTASSGS 1818
>ref|XP_006432925.1| hypothetical protein CICLE_v10000014mg [Citrus clementina]
gi|568835227|ref|XP_006471680.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 14-like [Citrus
sinensis] gi|557535047|gb|ESR46165.1| hypothetical
protein CICLE_v10000014mg [Citrus clementina]
Length = 1820
Score = 82.0 bits (201), Expect = 2e-13
Identities = 41/80 (51%), Positives = 54/80 (67%), Gaps = 1/80 (1%)
Frame = +2
Query: 5 HVSFRGMEGSHGGRACWLRLEDWENCQNRMAKTAEYANGNPAGDISQGRLRLVADAXXXX 184
+VSF GMEGSHGGRACWLR ++WE C+ R+A+ E N AGD++QGRLR+VAD+
Sbjct: 1741 NVSFLGMEGSHGGRACWLRTDEWEKCKQRVARVVE-VNPVSAGDLTQGRLRIVADSVQRT 1799
Query: 185 XXXXXXXXKD-GVISSSSNG 241
KD G +++SS G
Sbjct: 1800 LHMCLQGLKDGGTVTASSVG 1819
>gb|EOY11072.1| Mediator of RNA polymerase II transcription subunit 14 [Theobroma
cacao]
Length = 1813
Score = 82.0 bits (201), Expect = 2e-13
Identities = 38/54 (70%), Positives = 44/54 (81%)
Frame = +2
Query: 8 VSFRGMEGSHGGRACWLRLEDWENCQNRMAKTAEYANGNPAGDISQGRLRLVAD 169
VSF GMEGSHGGRACWLRL+DWE C+ R+A+T E +G AGD +QGRLR VAD
Sbjct: 1749 VSFLGMEGSHGGRACWLRLDDWEKCKQRVARTVE-VSGCTAGDAAQGRLRAVAD 1801
>ref|XP_003577926.1| PREDICTED: uncharacterized protein LOC100829137 [Brachypodium
distachyon]
Length = 1734
Score = 82.0 bits (201), Expect = 2e-13
Identities = 36/82 (43%), Positives = 53/82 (64%), Gaps = 1/82 (1%)
Frame = +2
Query: 2 AHVSFRGMEGSHGGRACWLRLEDWENCQNRMAKTAEYANGNPA-GDISQGRLRLVADAXX 178
+H+SF M+GSHGGRACWL+ EDWE C+ ++A+ E NG+ A G++ QGRLR+VA+
Sbjct: 1653 SHISFLAMDGSHGGRACWLQYEDWERCKQKVARAVETVNGSAAVGELGQGRLRMVAEMIQ 1712
Query: 179 XXXXXXXXXXKDGVISSSSNGT 244
+DG +S+ S +
Sbjct: 1713 KQLQLCLQQLRDGSLSAGSTAS 1734
>ref|NP_187125.1| mediator of RNA polymerase II transcription subunit 14 [Arabidopsis
thaliana] gi|75207288|sp|Q9SR02.1|MED14_ARATH RecName:
Full=Mediator of RNA polymerase II transcription subunit
14; AltName: Full=Protein STRUWWELPETER; Short=AtSWP
gi|6175174|gb|AAF04900.1|AC011437_15 hypothetical protein
[Arabidopsis thaliana]
gi|20068999|gb|AAM09647.1|AF466359_1 SWP1 [Arabidopsis
thaliana] gi|23898273|emb|CAD53582.1| struwwelpeter 1
protein [Arabidopsis thaliana]
gi|332640609|gb|AEE74130.1| RNA polymerase II
transcription mediator [Arabidopsis thaliana]
Length = 1703
Score = 80.9 bits (198), Expect = 5e-13
Identities = 34/55 (61%), Positives = 47/55 (85%)
Frame = +2
Query: 8 VSFRGMEGSHGGRACWLRLEDWENCQNRMAKTAEYANGNPAGDISQGRLRLVADA 172
V+F GMEGSHGGRACW R++DWE C+ R+++T E NG+ AGD++QG+L+LVAD+
Sbjct: 1621 VTFLGMEGSHGGRACWQRVDDWEKCKQRVSRTVE-VNGSAAGDLTQGKLKLVADS 1674
>ref|XP_006408156.1| hypothetical protein EUTSA_v10019885mg [Eutrema salsugineum]
gi|557109302|gb|ESQ49609.1| hypothetical protein
EUTSA_v10019885mg [Eutrema salsugineum]
Length = 1705
Score = 80.9 bits (198), Expect = 5e-13
Identities = 34/55 (61%), Positives = 47/55 (85%)
Frame = +2
Query: 8 VSFRGMEGSHGGRACWLRLEDWENCQNRMAKTAEYANGNPAGDISQGRLRLVADA 172
V+F GMEGSHGGRACW R++DWE C+ R+++T E NG+ AGD++QG+L+LVAD+
Sbjct: 1626 VTFLGMEGSHGGRACWQRVDDWEKCKQRVSRTVE-VNGSAAGDLTQGKLKLVADS 1679
>ref|XP_004973225.1| PREDICTED: mediator of RNA polymerase II transcription subunit
14-like isoform X2 [Setaria italica]
Length = 1613
Score = 80.9 bits (198), Expect = 5e-13
Identities = 39/77 (50%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
Frame = +2
Query: 5 HVSFRGMEGSHGGRACWLRLEDWENCQNRMAKTAEYANGNPA-GDISQGRLRLVADAXXX 181
HV+F MEGSHGGRACWL+ EDWE C+ + E ANG+PA G+I QGRLRLVA+
Sbjct: 1537 HVTFLAMEGSHGGRACWLQYEDWERCKQAVDLAVESANGSPATGEIGQGRLRLVAEMIHK 1596
Query: 182 XXXXXXXXXKDGVISSS 232
++G +S+S
Sbjct: 1597 QLQLSLQQLRNGQLSAS 1613