BLASTX nr result
ID: Zingiber24_contig00004076
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00004076
(369 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006439099.1| hypothetical protein CICLE_v10033132mg [Citr... 68 1e-09
ref|XP_003599258.1| Photosystem II 5 kDa protein [Medicago trunc... 65 1e-08
ref|XP_003599257.1| Photosystem II 5 kDa protein [Medicago trunc... 65 1e-08
gb|ESW03384.1| hypothetical protein PHAVU_011G009700g [Phaseolus... 62 1e-07
gb|AFK48333.1| unknown [Medicago truncatula] 62 1e-07
ref|XP_004499891.1| PREDICTED: photosystem II 5 kDa protein, chl... 61 1e-07
gb|EOY32695.1| Photosystem II 5 kD protein, putative [Theobroma ... 61 2e-07
ref|XP_002452351.1| hypothetical protein SORBIDRAFT_04g024130 [S... 61 2e-07
ref|XP_002298398.1| predicted protein [Populus trichocarpa] gi|1... 61 2e-07
ref|XP_002277909.1| PREDICTED: photosystem II 5 kDa protein, chl... 61 2e-07
gb|AFK47048.1| unknown [Lotus japonicus] 60 2e-07
ref|XP_004952905.1| PREDICTED: photosystem II 5 kDa protein, chl... 60 4e-07
ref|NP_564589.1| photosystem II 5 kD protein [Arabidopsis thalia... 60 4e-07
ref|XP_006446137.1| hypothetical protein CICLE_v10017247mg [Citr... 59 5e-07
ref|XP_002314076.1| photosystem II 5 kD family protein [Populus ... 59 5e-07
ref|XP_006369585.1| hypothetical protein POPTR_0001s26410g [Popu... 59 7e-07
gb|EOX96667.1| Photosystem II 5 kDa protein, chloroplastic [Theo... 59 7e-07
gb|EMT23305.1| hypothetical protein F775_30333 [Aegilops tauschii] 59 7e-07
ref|XP_004291777.1| PREDICTED: photosystem II 5 kDa protein, chl... 59 7e-07
ref|XP_002517817.1| Photosystem II 5 kDa protein, chloroplast pr... 59 7e-07
>ref|XP_006439099.1| hypothetical protein CICLE_v10033132mg [Citrus clementina]
gi|568858657|ref|XP_006482864.1| PREDICTED: photosystem
II 5 kDa protein, chloroplastic-like [Citrus sinensis]
gi|557541295|gb|ESR52339.1| hypothetical protein
CICLE_v10033132mg [Citrus clementina]
Length = 109
Score = 67.8 bits (164), Expect = 1e-09
Identities = 30/37 (81%), Positives = 32/37 (86%)
Frame = +3
Query: 36 GQGIAMALDEPKRGTPEAKKKYGPVCVTMPTAKICHK 146
G GIAMA +EPK GTPEAKK Y PVCVTMPTAK+CHK
Sbjct: 73 GIGIAMAAEEPKAGTPEAKKFYAPVCVTMPTAKVCHK 109
>ref|XP_003599258.1| Photosystem II 5 kDa protein [Medicago truncatula]
gi|355488306|gb|AES69509.1| Photosystem II 5 kDa protein
[Medicago truncatula] gi|388501032|gb|AFK38582.1|
unknown [Medicago truncatula]
Length = 105
Score = 64.7 bits (156), Expect = 1e-08
Identities = 28/33 (84%), Positives = 31/33 (93%)
Frame = +3
Query: 42 GIAMALDEPKRGTPEAKKKYGPVCVTMPTAKIC 140
G+AMA DEP+RGTPEAKKKYGPVCVT PTA+IC
Sbjct: 71 GVAMADDEPRRGTPEAKKKYGPVCVTNPTARIC 103
>ref|XP_003599257.1| Photosystem II 5 kDa protein [Medicago truncatula]
gi|355488305|gb|AES69508.1| Photosystem II 5 kDa protein
[Medicago truncatula]
Length = 106
Score = 64.7 bits (156), Expect = 1e-08
Identities = 28/33 (84%), Positives = 31/33 (93%)
Frame = +3
Query: 42 GIAMALDEPKRGTPEAKKKYGPVCVTMPTAKIC 140
G+AMA +EPKRGTPEAKKKY PVCVTMPTA+IC
Sbjct: 72 GVAMADEEPKRGTPEAKKKYAPVCVTMPTARIC 104
>gb|ESW03384.1| hypothetical protein PHAVU_011G009700g [Phaseolus vulgaris]
Length = 106
Score = 61.6 bits (148), Expect = 1e-07
Identities = 28/35 (80%), Positives = 32/35 (91%)
Frame = +3
Query: 42 GIAMALDEPKRGTPEAKKKYGPVCVTMPTAKICHK 146
G++MA DEPKRGTPEAKK Y P+CVTMPTA+ICHK
Sbjct: 73 GMSMA-DEPKRGTPEAKKIYYPICVTMPTARICHK 106
>gb|AFK48333.1| unknown [Medicago truncatula]
Length = 108
Score = 61.6 bits (148), Expect = 1e-07
Identities = 26/33 (78%), Positives = 30/33 (90%)
Frame = +3
Query: 42 GIAMALDEPKRGTPEAKKKYGPVCVTMPTAKIC 140
G+A+A DEPKRG+PEAKK Y PVCVTMPTA+IC
Sbjct: 74 GMALAADEPKRGSPEAKKAYAPVCVTMPTARIC 106
>ref|XP_004499891.1| PREDICTED: photosystem II 5 kDa protein, chloroplastic-like [Cicer
arietinum]
Length = 105
Score = 61.2 bits (147), Expect = 1e-07
Identities = 28/33 (84%), Positives = 29/33 (87%)
Frame = +3
Query: 42 GIAMALDEPKRGTPEAKKKYGPVCVTMPTAKIC 140
G+AMA DEPKRGTPEAKKKY VCVT PTAKIC
Sbjct: 71 GVAMADDEPKRGTPEAKKKYAVVCVTNPTAKIC 103
>gb|EOY32695.1| Photosystem II 5 kD protein, putative [Theobroma cacao]
Length = 122
Score = 60.8 bits (146), Expect = 2e-07
Identities = 23/33 (69%), Positives = 29/33 (87%)
Frame = +3
Query: 45 IAMALDEPKRGTPEAKKKYGPVCVTMPTAKICH 143
+AM ++PK GTPEAKKKY P+CVTMPTA++CH
Sbjct: 74 VAMGAEDPKAGTPEAKKKYAPICVTMPTARVCH 106
>ref|XP_002452351.1| hypothetical protein SORBIDRAFT_04g024130 [Sorghum bicolor]
gi|241932182|gb|EES05327.1| hypothetical protein
SORBIDRAFT_04g024130 [Sorghum bicolor]
Length = 152
Score = 60.8 bits (146), Expect = 2e-07
Identities = 27/36 (75%), Positives = 31/36 (86%)
Frame = +3
Query: 36 GQGIAMALDEPKRGTPEAKKKYGPVCVTMPTAKICH 143
G G AMA +PK+G+PEAKKKY P+CVTMPTAKICH
Sbjct: 118 GAGAAMA--DPKKGSPEAKKKYAPICVTMPTAKICH 151
>ref|XP_002298398.1| predicted protein [Populus trichocarpa] gi|118487685|gb|ABK95667.1|
unknown [Populus trichocarpa]
gi|118488853|gb|ABK96236.1| unknown [Populus trichocarpa
x Populus deltoides] gi|118488867|gb|ABK96243.1| unknown
[Populus trichocarpa x Populus deltoides]
gi|118489821|gb|ABK96710.1| unknown [Populus trichocarpa
x Populus deltoides] gi|118489889|gb|ABK96742.1| unknown
[Populus trichocarpa x Populus deltoides]
Length = 105
Score = 60.8 bits (146), Expect = 2e-07
Identities = 25/34 (73%), Positives = 31/34 (91%)
Frame = +3
Query: 45 IAMALDEPKRGTPEAKKKYGPVCVTMPTAKICHK 146
+A+A +EP+RGTPEAKKKY P+CVTMPTA+IC K
Sbjct: 72 VAIADEEPERGTPEAKKKYAPICVTMPTARICRK 105
>ref|XP_002277909.1| PREDICTED: photosystem II 5 kDa protein, chloroplastic [Vitis
vinifera] gi|147792102|emb|CAN66292.1| hypothetical
protein VITISV_027031 [Vitis vinifera]
Length = 109
Score = 60.8 bits (146), Expect = 2e-07
Identities = 29/35 (82%), Positives = 30/35 (85%)
Frame = +3
Query: 42 GIAMALDEPKRGTPEAKKKYGPVCVTMPTAKICHK 146
GIAMA EPK GTPEAKK Y P+CVTMPTAKICHK
Sbjct: 76 GIAMA-GEPKPGTPEAKKIYAPICVTMPTAKICHK 109
>gb|AFK47048.1| unknown [Lotus japonicus]
Length = 107
Score = 60.5 bits (145), Expect = 2e-07
Identities = 27/35 (77%), Positives = 31/35 (88%)
Frame = +3
Query: 42 GIAMALDEPKRGTPEAKKKYGPVCVTMPTAKICHK 146
GIA+A DEPK G+PEAKKKY PVCVTMPTA++C K
Sbjct: 70 GIALA-DEPKNGSPEAKKKYAPVCVTMPTARVCRK 103
>ref|XP_004952905.1| PREDICTED: photosystem II 5 kDa protein, chloroplastic-like
[Setaria italica]
Length = 107
Score = 59.7 bits (143), Expect = 4e-07
Identities = 27/36 (75%), Positives = 29/36 (80%)
Frame = +3
Query: 36 GQGIAMALDEPKRGTPEAKKKYGPVCVTMPTAKICH 143
G G AMA PK GTPEAKKKY P+CVTMPTAK+CH
Sbjct: 73 GAGAAMA--GPKNGTPEAKKKYAPICVTMPTAKVCH 106
>ref|NP_564589.1| photosystem II 5 kD protein [Arabidopsis thaliana]
gi|4836947|gb|AAD30649.1|AC006085_22 Putative
photosystem II 5 KD protein [Arabidopsis thaliana]
gi|12325362|gb|AAG52621.1|AC024261_8 unknown protein;
88255-88575 [Arabidopsis thaliana]
gi|14326535|gb|AAK60312.1|AF385721_1 At1g51400/F5D21_10
[Arabidopsis thaliana] gi|15215584|gb|AAK91337.1|
At1g51400/F5D21_10 [Arabidopsis thaliana]
gi|22137316|gb|AAM91503.1| At1g51400/F5D21_10
[Arabidopsis thaliana] gi|332194541|gb|AEE32662.1|
photosystem II 5 kD protein [Arabidopsis thaliana]
Length = 106
Score = 59.7 bits (143), Expect = 4e-07
Identities = 27/32 (84%), Positives = 28/32 (87%)
Frame = +3
Query: 45 IAMALDEPKRGTPEAKKKYGPVCVTMPTAKIC 140
+AMA DEPKRGT AKKKY PVCVTMPTAKIC
Sbjct: 73 VAMADDEPKRGTEAAKKKYAPVCVTMPTAKIC 104
>ref|XP_006446137.1| hypothetical protein CICLE_v10017247mg [Citrus clementina]
gi|568832832|ref|XP_006470630.1| PREDICTED: photosystem
II 5 kDa protein, chloroplastic-like [Citrus sinensis]
gi|557548748|gb|ESR59377.1| hypothetical protein
CICLE_v10017247mg [Citrus clementina]
Length = 111
Score = 59.3 bits (142), Expect = 5e-07
Identities = 27/35 (77%), Positives = 31/35 (88%), Gaps = 1/35 (2%)
Frame = +3
Query: 45 IAMA-LDEPKRGTPEAKKKYGPVCVTMPTAKICHK 146
+AMA +EPKRGTP+AKKKY PVCVTMPTA+IC K
Sbjct: 77 VAMAESEEPKRGTPDAKKKYAPVCVTMPTARICRK 111
>ref|XP_002314076.1| photosystem II 5 kD family protein [Populus trichocarpa]
gi|222850484|gb|EEE88031.1| photosystem II 5 kD family
protein [Populus trichocarpa]
Length = 105
Score = 59.3 bits (142), Expect = 5e-07
Identities = 24/32 (75%), Positives = 30/32 (93%)
Frame = +3
Query: 45 IAMALDEPKRGTPEAKKKYGPVCVTMPTAKIC 140
+A+A +EP+RGTPEAKKKY P+CVTMPTA+IC
Sbjct: 72 VAIADEEPRRGTPEAKKKYAPICVTMPTARIC 103
>ref|XP_006369585.1| hypothetical protein POPTR_0001s26410g [Populus trichocarpa]
gi|550348232|gb|ERP66154.1| hypothetical protein
POPTR_0001s26410g [Populus trichocarpa]
Length = 110
Score = 58.9 bits (141), Expect = 7e-07
Identities = 24/32 (75%), Positives = 30/32 (93%)
Frame = +3
Query: 45 IAMALDEPKRGTPEAKKKYGPVCVTMPTAKIC 140
+A+A +EP+RGTPEAKKKY P+CVTMPTA+IC
Sbjct: 29 VAIADEEPERGTPEAKKKYAPICVTMPTARIC 60
>gb|EOX96667.1| Photosystem II 5 kDa protein, chloroplastic [Theobroma cacao]
Length = 106
Score = 58.9 bits (141), Expect = 7e-07
Identities = 26/35 (74%), Positives = 30/35 (85%)
Frame = +3
Query: 42 GIAMALDEPKRGTPEAKKKYGPVCVTMPTAKICHK 146
G+A A DEPK GTPEA+K Y P+CVTMPTA+ICHK
Sbjct: 73 GVAAA-DEPKPGTPEARKVYAPICVTMPTARICHK 106
>gb|EMT23305.1| hypothetical protein F775_30333 [Aegilops tauschii]
Length = 106
Score = 58.9 bits (141), Expect = 7e-07
Identities = 24/34 (70%), Positives = 29/34 (85%)
Frame = +3
Query: 42 GIAMALDEPKRGTPEAKKKYGPVCVTMPTAKICH 143
G+A A + K+G+PEAKKKY PVC+TMPTAKICH
Sbjct: 72 GVAFAESDVKKGSPEAKKKYAPVCITMPTAKICH 105
>ref|XP_004291777.1| PREDICTED: photosystem II 5 kDa protein, chloroplastic-like
[Fragaria vesca subsp. vesca]
Length = 104
Score = 58.9 bits (141), Expect = 7e-07
Identities = 27/34 (79%), Positives = 30/34 (88%)
Frame = +3
Query: 45 IAMALDEPKRGTPEAKKKYGPVCVTMPTAKICHK 146
+AMA DEP+RGTP AKKKY PVCVTMPTA+IC K
Sbjct: 72 VAMA-DEPERGTPAAKKKYAPVCVTMPTARICRK 104
>ref|XP_002517817.1| Photosystem II 5 kDa protein, chloroplast precursor, putative
[Ricinus communis] gi|223543089|gb|EEF44624.1|
Photosystem II 5 kDa protein, chloroplast precursor,
putative [Ricinus communis]
Length = 104
Score = 58.9 bits (141), Expect = 7e-07
Identities = 27/35 (77%), Positives = 30/35 (85%)
Frame = +3
Query: 42 GIAMALDEPKRGTPEAKKKYGPVCVTMPTAKICHK 146
G+A A +EPK GTPEAKK Y PVCVTMPTA+ICHK
Sbjct: 71 GVAAA-EEPKAGTPEAKKFYSPVCVTMPTARICHK 104