BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00004056
         (2096 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006827424.1| hypothetical protein AMTR_s00009p00080200 [A...   902   0.0  
ref|NP_001066567.1| Os12g0277500 [Oryza sativa Japonica Group] g...   898   0.0  
ref|XP_006653189.1| PREDICTED: ruBisCO large subunit-binding pro...   896   0.0  
ref|XP_002277357.2| PREDICTED: ruBisCO large subunit-binding pro...   894   0.0  
ref|XP_006424516.1| hypothetical protein CICLE_v10028085mg [Citr...   893   0.0  
ref|XP_003581066.1| PREDICTED: ruBisCO large subunit-binding pro...   892   0.0  
ref|XP_002328161.1| predicted protein [Populus trichocarpa] gi|5...   892   0.0  
ref|XP_004962429.1| PREDICTED: ruBisCO large subunit-binding pro...   890   0.0  
ref|XP_002313525.1| RUBISCO SUBUNIT BINDING-protein ALPHA SUBUNI...   890   0.0  
ref|XP_006488046.1| PREDICTED: ruBisCO large subunit-binding pro...   889   0.0  
ref|XP_004291571.1| PREDICTED: ruBisCO large subunit-binding pro...   888   0.0  
ref|XP_006591127.1| PREDICTED: ruBisCO large subunit-binding pro...   888   0.0  
ref|XP_006652052.1| PREDICTED: ruBisCO large subunit-binding pro...   887   0.0  
gb|EMJ06181.1| hypothetical protein PRUPE_ppa003328mg [Prunus pe...   887   0.0  
ref|XP_002440887.1| hypothetical protein SORBIDRAFT_09g014430 [S...   887   0.0  
gb|EOY34441.1| RuBisCO large subunit-binding protein subunit alp...   885   0.0  
gb|EOY34440.1| RuBisCO large subunit-binding protein subunit alp...   885   0.0  
gb|AAP44754.1| putative rubisco subunit binding-protein alpha su...   885   0.0  
ref|XP_003558045.1| PREDICTED: ruBisCO large subunit-binding pro...   884   0.0  
gb|EAY92674.1| hypothetical protein OsI_14427 [Oryza sativa Indi...   884   0.0  

>ref|XP_006827424.1| hypothetical protein AMTR_s00009p00080200 [Amborella trichopoda]
            gi|548832044|gb|ERM94840.1| hypothetical protein
            AMTR_s00009p00080200 [Amborella trichopoda]
          Length = 581

 Score =  902 bits (2331), Expect = 0.0
 Identities = 473/581 (81%), Positives = 525/581 (90%), Gaps = 3/581 (0%)
 Frame = +3

Query: 78   MAAANAISVSAFVTSPRQRWSMRRRTSGGGYKPM---VVRAKAKDIAFDQESRSSLQAGV 248
            MAAANA S +   +SP+Q    R+ + G   + +   VVRA+AKDIAFDQ SR++LQAG+
Sbjct: 1    MAAANAFSSAVLRSSPQQGGLRRKVSHGSNSRTVGRFVVRARAKDIAFDQSSRAALQAGI 60

Query: 249  EKLADAVGVTLGPRGRNVVLDEFGNPKVVNDGVTIARAIELADPMENAGAALIREVASKT 428
            +KLADAVG+TLGPRGRNVVLDEFGNP+VVNDGVTIARAI+LA+PMENAGAALIREVASKT
Sbjct: 61   DKLADAVGITLGPRGRNVVLDEFGNPRVVNDGVTIARAIDLANPMENAGAALIREVASKT 120

Query: 429  NDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSVKKGIDKTVQKLVEELEKKARPVKGR 608
            NDSAGDGTTTAS+LAREIIKLGLLSVTSGANPVS+KKGIDK VQ LVEELEKKARP+KGR
Sbjct: 121  NDSAGDGTTTASILAREIIKLGLLSVTSGANPVSIKKGIDKVVQGLVEELEKKARPIKGR 180

Query: 609  ADIKAVASVSAGNDEFVGDMIADAIDKVGPDGVLSIESSSSFETTVDVEEGMEIDRGYIS 788
             DIKA+A++SAGNDEFVG MIADAIDKVGPDGVLSIESSSSFETTVDVEEGMEIDRGY+S
Sbjct: 181  DDIKAIATISAGNDEFVGTMIADAIDKVGPDGVLSIESSSSFETTVDVEEGMEIDRGYVS 240

Query: 789  PQFVTNLEKMLVEFENAKVLVTDQKISTVKEIIPLLEKVTQLRTPLLIIAEDVTGEALAT 968
            PQFVTN EK+ VEFENA+VLVTDQKIST+KEIIPLLEK TQLR PLLI+AEDVTGEALAT
Sbjct: 241  PQFVTNPEKLTVEFENARVLVTDQKISTIKEIIPLLEKTTQLRAPLLIVAEDVTGEALAT 300

Query: 969  LVVNKLRGILNVAAIKAPGFGERRKAILQDMAILTGAELQAKDLGLLIEDVSVEQLGTAR 1148
            LVVNKLRGILNVAAIKAPGFGERRKA++QD+AILTGAE QA DLGLL+E  +VEQLGTAR
Sbjct: 301  LVVNKLRGILNVAAIKAPGFGERRKAMIQDIAILTGAEYQASDLGLLVESATVEQLGTAR 360

Query: 1149 KVTISQNSTTIISDAATKDEIQARIAQLKRELSESNSVYDSEKLAERIAKLSGGVAVIKV 1328
            KVTI+++STTII+DAATKDEIQARIAQ+K+EL+E++SVYDSEKLAERIAKLSGGVAVIKV
Sbjct: 361  KVTITKDSTTIIADAATKDEIQARIAQIKKELAETDSVYDSEKLAERIAKLSGGVAVIKV 420

Query: 1329 GAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGATYVHLSTIVPGIKDSLEDHDERLG 1508
            GAATETELEDRKLRIEDAKNATFAAIEEGIVPGGG  YVHLS  VP IK+ LED DERLG
Sbjct: 421  GAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGTAYVHLSAHVPAIKEKLEDADERLG 480

Query: 1509 ADIVQKALVAPAALIAQNAGVEGEVVVEKILDSDWEIGYNAMEDKYENLLESGVIDPAKV 1688
            A+IV KALVAPAALIAQNAGVEGEV+VEKI   +WE+GYNAM D+YENL+E+GVIDPAKV
Sbjct: 481  AEIVMKALVAPAALIAQNAGVEGEVIVEKIKTGEWEVGYNAMTDRYENLVEAGVIDPAKV 540

Query: 1689 TRCALQNSASVAGMVLTTQAIVVEXXXXXXXXXXXXXGLAV 1811
            TRCALQN+ASVAGMVLTTQAIVVE             GL++
Sbjct: 541  TRCALQNAASVAGMVLTTQAIVVEKPQPKAPVAAPPQGLSI 581


>ref|NP_001066567.1| Os12g0277500 [Oryza sativa Japonica Group] gi|77554291|gb|ABA97087.1|
            RuBisCO subunit binding-protein alpha subunit,
            chloroplast precursor, putative, expressed [Oryza sativa
            Japonica Group] gi|113649074|dbj|BAF29586.1| Os12g0277500
            [Oryza sativa Japonica Group] gi|125536273|gb|EAY82761.1|
            hypothetical protein OsI_37967 [Oryza sativa Indica
            Group] gi|313575777|gb|ADR66968.1| 60 kDa chaperonin
            alpha subunit [Oryza sativa Japonica Group]
          Length = 578

 Score =  898 bits (2321), Expect = 0.0
 Identities = 466/561 (83%), Positives = 520/561 (92%)
 Frame = +3

Query: 78   MAAANAISVSAFVTSPRQRWSMRRRTSGGGYKPMVVRAKAKDIAFDQESRSSLQAGVEKL 257
            MA+ANAIS ++ + S   +  +RR  +G   + +VVRA AKDIAFDQ+SR++LQAGVEKL
Sbjct: 1    MASANAISTASLLRSFSSQGRVRRAKNGRAQR-LVVRADAKDIAFDQKSRAALQAGVEKL 59

Query: 258  ADAVGVTLGPRGRNVVLDEFGNPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDS 437
            A+AVGVTLGPRGRNVVLDE+G+PKVVNDGVTIARAIEL DPMENAGAALIREVASKTNDS
Sbjct: 60   ANAVGVTLGPRGRNVVLDEYGSPKVVNDGVTIARAIELYDPMENAGAALIREVASKTNDS 119

Query: 438  AGDGTTTASVLAREIIKLGLLSVTSGANPVSVKKGIDKTVQKLVEELEKKARPVKGRADI 617
            AGDGTTTASVLAREIIKLGLLSVTSGANPVS+KKGIDKTV  L+EELEKKARPVKG  DI
Sbjct: 120  AGDGTTTASVLAREIIKLGLLSVTSGANPVSLKKGIDKTVHGLIEELEKKARPVKGSGDI 179

Query: 618  KAVASVSAGNDEFVGDMIADAIDKVGPDGVLSIESSSSFETTVDVEEGMEIDRGYISPQF 797
            KAVAS+SAGNDE +G MIADAIDKVGPDGVLSIESSSSFETTVDVEEGMEIDRGYISPQF
Sbjct: 180  KAVASISAGNDELIGSMIADAIDKVGPDGVLSIESSSSFETTVDVEEGMEIDRGYISPQF 239

Query: 798  VTNLEKMLVEFENAKVLVTDQKISTVKEIIPLLEKVTQLRTPLLIIAEDVTGEALATLVV 977
            VTNLEK +VEFENAKVL+TDQKI+++KEI+P+LEK TQLR PL IIAED+TGEALATLVV
Sbjct: 240  VTNLEKSIVEFENAKVLITDQKITSIKEILPILEKTTQLRAPLFIIAEDITGEALATLVV 299

Query: 978  NKLRGILNVAAIKAPGFGERRKAILQDMAILTGAELQAKDLGLLIEDVSVEQLGTARKVT 1157
            NKLRGILNVAAIKAP FGERRKA+LQD+AI+TGAE  AKDLGLL+E+ + EQLGTARKVT
Sbjct: 300  NKLRGILNVAAIKAPSFGERRKAVLQDIAIVTGAEFLAKDLGLLVENATEEQLGTARKVT 359

Query: 1158 ISQNSTTIISDAATKDEIQARIAQLKRELSESNSVYDSEKLAERIAKLSGGVAVIKVGAA 1337
            I Q +TT+I+DAA+KDEIQAR+AQLK+ELSE++S+YD+EKLAERIAKLSGGVAVIKVGAA
Sbjct: 360  IHQTTTTLIADAASKDEIQARVAQLKKELSETDSIYDTEKLAERIAKLSGGVAVIKVGAA 419

Query: 1338 TETELEDRKLRIEDAKNATFAAIEEGIVPGGGATYVHLSTIVPGIKDSLEDHDERLGADI 1517
            TETELEDR+LRIEDAKNATFAAIEEGIVPGGG  YVHLST VP IK+++EDHDERLGADI
Sbjct: 420  TETELEDRQLRIEDAKNATFAAIEEGIVPGGGTAYVHLSTTVPAIKETIEDHDERLGADI 479

Query: 1518 VQKALVAPAALIAQNAGVEGEVVVEKILDSDWEIGYNAMEDKYENLLESGVIDPAKVTRC 1697
            +QKALVAPA+LIA NAGVEGEVVVEKI D +WE+GYNAM DKYENL+E+GVIDPAKVTRC
Sbjct: 480  IQKALVAPASLIAHNAGVEGEVVVEKIKDGEWEVGYNAMNDKYENLIEAGVIDPAKVTRC 539

Query: 1698 ALQNSASVAGMVLTTQAIVVE 1760
            ALQN+ASVAGMVLTTQAIVVE
Sbjct: 540  ALQNAASVAGMVLTTQAIVVE 560


>ref|XP_006653189.1| PREDICTED: ruBisCO large subunit-binding protein subunit alpha,
            chloroplastic-like [Oryza brachyantha]
          Length = 579

 Score =  896 bits (2315), Expect = 0.0
 Identities = 465/561 (82%), Positives = 516/561 (91%)
 Frame = +3

Query: 78   MAAANAISVSAFVTSPRQRWSMRRRTSGGGYKPMVVRAKAKDIAFDQESRSSLQAGVEKL 257
            MA+ANAIS +A +          RR   G  + +VVRA AKDIAFDQ+SR++LQAGVEKL
Sbjct: 1    MASANAISTTASLPRYFSSQGRVRRARNGRTQRLVVRADAKDIAFDQKSRAALQAGVEKL 60

Query: 258  ADAVGVTLGPRGRNVVLDEFGNPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDS 437
            A+AVGVTLGPRGRNVVLDE+G+PKVVNDGVTIARAIEL DPMENAGAALIREVASKTNDS
Sbjct: 61   ANAVGVTLGPRGRNVVLDEYGSPKVVNDGVTIARAIELYDPMENAGAALIREVASKTNDS 120

Query: 438  AGDGTTTASVLAREIIKLGLLSVTSGANPVSVKKGIDKTVQKLVEELEKKARPVKGRADI 617
            AGDGTTTASVLAREIIKLGLLSVTSGANPVS+KKGIDKTV  L+EELEKKARPVKG  DI
Sbjct: 121  AGDGTTTASVLAREIIKLGLLSVTSGANPVSLKKGIDKTVHGLIEELEKKARPVKGSGDI 180

Query: 618  KAVASVSAGNDEFVGDMIADAIDKVGPDGVLSIESSSSFETTVDVEEGMEIDRGYISPQF 797
            KAVAS+SAGNDE +G MIADAIDKVGPDGVLSIESSSSFETTVDVEEGMEIDRGYISPQF
Sbjct: 181  KAVASISAGNDELIGSMIADAIDKVGPDGVLSIESSSSFETTVDVEEGMEIDRGYISPQF 240

Query: 798  VTNLEKMLVEFENAKVLVTDQKISTVKEIIPLLEKVTQLRTPLLIIAEDVTGEALATLVV 977
            VTNLEK +VEFENAKVL+TDQKI+++KEI+P+LEK TQLR PL IIAED+TGEALATLVV
Sbjct: 241  VTNLEKSIVEFENAKVLITDQKITSIKEILPILEKTTQLRAPLFIIAEDITGEALATLVV 300

Query: 978  NKLRGILNVAAIKAPGFGERRKAILQDMAILTGAELQAKDLGLLIEDVSVEQLGTARKVT 1157
            NKLRGILNVAAIKAP FGERRKA+LQD+AI+TGAE  AKD+GLL+E+ + EQLGTARKVT
Sbjct: 301  NKLRGILNVAAIKAPSFGERRKAVLQDIAIVTGAEFLAKDMGLLVENATEEQLGTARKVT 360

Query: 1158 ISQNSTTIISDAATKDEIQARIAQLKRELSESNSVYDSEKLAERIAKLSGGVAVIKVGAA 1337
            I Q +TT+I+DAA+KDEIQAR+AQLK+ELSE++S+YD+EKLAERIAKLSGGVAVIKVGAA
Sbjct: 361  IHQTTTTLIADAASKDEIQARVAQLKKELSETDSIYDTEKLAERIAKLSGGVAVIKVGAA 420

Query: 1338 TETELEDRKLRIEDAKNATFAAIEEGIVPGGGATYVHLSTIVPGIKDSLEDHDERLGADI 1517
            TETELEDR+LRIEDAKNATFAAIEEGIVPGGG  YVHLST VP IK+++EDHDERLGADI
Sbjct: 421  TETELEDRQLRIEDAKNATFAAIEEGIVPGGGTAYVHLSTSVPAIKETIEDHDERLGADI 480

Query: 1518 VQKALVAPAALIAQNAGVEGEVVVEKILDSDWEIGYNAMEDKYENLLESGVIDPAKVTRC 1697
            +QKALVAPA+LIA NAGVEGEVVVEKI D +WE+GYNAM DKYENL+E+GVIDPAKVTRC
Sbjct: 481  IQKALVAPASLIAHNAGVEGEVVVEKIKDGEWEVGYNAMNDKYENLIEAGVIDPAKVTRC 540

Query: 1698 ALQNSASVAGMVLTTQAIVVE 1760
            ALQN+ASVAGMVLTTQAIVVE
Sbjct: 541  ALQNAASVAGMVLTTQAIVVE 561


>ref|XP_002277357.2| PREDICTED: ruBisCO large subunit-binding protein subunit alpha,
            chloroplastic-like [Vitis vinifera]
          Length = 586

 Score =  894 bits (2310), Expect = 0.0
 Identities = 472/569 (82%), Positives = 522/569 (91%), Gaps = 8/569 (1%)
 Frame = +3

Query: 78   MAAANAISVSAFVTSPRQRWSMRRRTSGGG----YKP----MVVRAKAKDIAFDQESRSS 233
            MA+ANAIS ++ + SP+Q    RR     G    Y+P     VVRA AK+IAFDQ SR++
Sbjct: 1    MASANAISTASIIRSPKQESFRRRVNQQQGPKFNYRPSNNRFVVRASAKEIAFDQSSRAA 60

Query: 234  LQAGVEKLADAVGVTLGPRGRNVVLDEFGNPKVVNDGVTIARAIELADPMENAGAALIRE 413
            LQAG++KLADAVG+TLGPRGRNVVLDEFG+PKVVNDGVTIARAIELAD MENAGAALIRE
Sbjct: 61   LQAGIDKLADAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELADAMENAGAALIRE 120

Query: 414  VASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSVKKGIDKTVQKLVEELEKKAR 593
            VASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVS+KKGIDKTV +LV+ELEKKAR
Sbjct: 121  VASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSIKKGIDKTVHELVKELEKKAR 180

Query: 594  PVKGRADIKAVASVSAGNDEFVGDMIADAIDKVGPDGVLSIESSSSFETTVDVEEGMEID 773
            PV+G  DIKAVAS+SAGNDEF+G MIADAI+KVGPDGVLSIESSSSFETTVDVEEGMEID
Sbjct: 181  PVEGGDDIKAVASISAGNDEFIGSMIADAINKVGPDGVLSIESSSSFETTVDVEEGMEID 240

Query: 774  RGYISPQFVTNLEKMLVEFENAKVLVTDQKISTVKEIIPLLEKVTQLRTPLLIIAEDVTG 953
            RGYISPQFVTN EK++ EFENA+VLVTDQKI+T+K+IIPLLEK TQLR+PLLI+AEDVTG
Sbjct: 241  RGYISPQFVTNPEKLIAEFENARVLVTDQKITTIKDIIPLLEKTTQLRSPLLIVAEDVTG 300

Query: 954  EALATLVVNKLRGILNVAAIKAPGFGERRKAILQDMAILTGAELQAKDLGLLIEDVSVEQ 1133
            EALATLVVNKLRGILNVAAIKAPGFGERRKA+LQD+AI+TGAE QA DLGLLIE+ SVEQ
Sbjct: 301  EALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIMTGAEFQANDLGLLIENTSVEQ 360

Query: 1134 LGTARKVTISQNSTTIISDAATKDEIQARIAQLKRELSESNSVYDSEKLAERIAKLSGGV 1313
            LG ARKVTI+++STTII+DAA+KDEIQARIAQ+K+EL+E++SVYD+EKLAERIAKLSGGV
Sbjct: 361  LGLARKVTITKDSTTIIADAASKDEIQARIAQIKKELAETDSVYDTEKLAERIAKLSGGV 420

Query: 1314 AVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGATYVHLSTIVPGIKDSLEDH 1493
            AVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGA +VHLST VP IKD LED 
Sbjct: 421  AVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAAFVHLSTYVPAIKDKLEDA 480

Query: 1494 DERLGADIVQKALVAPAALIAQNAGVEGEVVVEKILDSDWEIGYNAMEDKYENLLESGVI 1673
            DERLGADIVQKALVAPA+LIA NAGVEGEVVVEKI   +W +GYNAM DKYENL+E+GVI
Sbjct: 481  DERLGADIVQKALVAPASLIAHNAGVEGEVVVEKIKACEWAVGYNAMTDKYENLVEAGVI 540

Query: 1674 DPAKVTRCALQNSASVAGMVLTTQAIVVE 1760
            DPAKV RCALQN+ASVAGMVLTTQAIVVE
Sbjct: 541  DPAKVARCALQNAASVAGMVLTTQAIVVE 569


>ref|XP_006424516.1| hypothetical protein CICLE_v10028085mg [Citrus clementina]
            gi|557526450|gb|ESR37756.1| hypothetical protein
            CICLE_v10028085mg [Citrus clementina]
          Length = 582

 Score =  893 bits (2308), Expect = 0.0
 Identities = 470/565 (83%), Positives = 519/565 (91%), Gaps = 4/565 (0%)
 Frame = +3

Query: 78   MAAANAISVSAFVTSPRQRWSMRRRTSGGG----YKPMVVRAKAKDIAFDQESRSSLQAG 245
            MA+ANA+S ++ + SP+Q    RR     G    Y+   VRA AKDIAFDQ SR+++QAG
Sbjct: 1    MASANALSSASILCSPKQGSLRRRGNQNQGQRVNYRRFAVRASAKDIAFDQRSRAAMQAG 60

Query: 246  VEKLADAVGVTLGPRGRNVVLDEFGNPKVVNDGVTIARAIELADPMENAGAALIREVASK 425
            ++KL+DAVG+TLGPRGRNVVLDEFG+PKVVNDGVTIARAIELADPMENAGAALIREVASK
Sbjct: 61   IDKLSDAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELADPMENAGAALIREVASK 120

Query: 426  TNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSVKKGIDKTVQKLVEELEKKARPVKG 605
            TNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVS+K+GIDKTV  LVEELEK+ARP++G
Sbjct: 121  TNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEG 180

Query: 606  RADIKAVASVSAGNDEFVGDMIADAIDKVGPDGVLSIESSSSFETTVDVEEGMEIDRGYI 785
            R DIKAVA++SAGND+ +G MIADAIDKVGPDGVLSIESSSSFETTV+VEEGMEIDRGYI
Sbjct: 181  RDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFETTVEVEEGMEIDRGYI 240

Query: 786  SPQFVTNLEKMLVEFENAKVLVTDQKISTVKEIIPLLEKVTQLRTPLLIIAEDVTGEALA 965
            SPQFVTN EK++VEFENA+VLVTDQKIS +K+IIPLLEK TQLR PLLIIAEDVTGEALA
Sbjct: 241  SPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALA 300

Query: 966  TLVVNKLRGILNVAAIKAPGFGERRKAILQDMAILTGAELQAKDLGLLIEDVSVEQLGTA 1145
            TLVVNKLRGILNVAAIKAPGFGERRKA+LQD+AI+TGAE QA DLGLLIE+ SVEQLGTA
Sbjct: 301  TLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTA 360

Query: 1146 RKVTISQNSTTIISDAATKDEIQARIAQLKRELSESNSVYDSEKLAERIAKLSGGVAVIK 1325
            RKVTI ++STTII+DAA+KDEIQARIAQLK+EL+E++SVYDSEKLAERIAKLSGGVAVIK
Sbjct: 361  RKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIK 420

Query: 1326 VGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGATYVHLSTIVPGIKDSLEDHDERL 1505
            VGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGA  VHLS  VP IKD LED DERL
Sbjct: 421  VGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERL 480

Query: 1506 GADIVQKALVAPAALIAQNAGVEGEVVVEKILDSDWEIGYNAMEDKYENLLESGVIDPAK 1685
            GADIVQKALVAPA+LIA NAGVEGEVVVEK+ DS+W  GYNAM DKYEN+L++GVIDPAK
Sbjct: 481  GADIVQKALVAPASLIAHNAGVEGEVVVEKVKDSEWTTGYNAMTDKYENMLQAGVIDPAK 540

Query: 1686 VTRCALQNSASVAGMVLTTQAIVVE 1760
            VTRCALQN+ASVAGMVLTTQAIVVE
Sbjct: 541  VTRCALQNAASVAGMVLTTQAIVVE 565


>ref|XP_003581066.1| PREDICTED: ruBisCO large subunit-binding protein subunit alpha,
            chloroplastic-like [Brachypodium distachyon]
          Length = 578

 Score =  892 bits (2306), Expect = 0.0
 Identities = 462/561 (82%), Positives = 521/561 (92%)
 Frame = +3

Query: 78   MAAANAISVSAFVTSPRQRWSMRRRTSGGGYKPMVVRAKAKDIAFDQESRSSLQAGVEKL 257
            MA+ANAIS ++ + S   +  +RR  +G   + +VVRA AKDIAFDQ+SR++LQAGVEKL
Sbjct: 1    MASANAISTASLLRSFSSQGRVRRSRNGRAQR-LVVRADAKDIAFDQKSRAALQAGVEKL 59

Query: 258  ADAVGVTLGPRGRNVVLDEFGNPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDS 437
            A+AVGVTLGPRGRNVVLDE+G+PKVVNDGVTIARAIELA+PMENAGAALIREVASKTNDS
Sbjct: 60   ANAVGVTLGPRGRNVVLDEYGSPKVVNDGVTIARAIELANPMENAGAALIREVASKTNDS 119

Query: 438  AGDGTTTASVLAREIIKLGLLSVTSGANPVSVKKGIDKTVQKLVEELEKKARPVKGRADI 617
            AGDGTTTA VLAREIIKLG+LSVTSGANPVS+KKGIDKTVQ L+ ELE KARPVKG  DI
Sbjct: 120  AGDGTTTACVLAREIIKLGILSVTSGANPVSLKKGIDKTVQGLIAELENKARPVKGSGDI 179

Query: 618  KAVASVSAGNDEFVGDMIADAIDKVGPDGVLSIESSSSFETTVDVEEGMEIDRGYISPQF 797
            KAVAS+SAGNDE +G MIADAIDKVGPDGVLSIESSSSFETTVDVEEGMEIDRGYISPQF
Sbjct: 180  KAVASISAGNDELIGSMIADAIDKVGPDGVLSIESSSSFETTVDVEEGMEIDRGYISPQF 239

Query: 798  VTNLEKMLVEFENAKVLVTDQKISTVKEIIPLLEKVTQLRTPLLIIAEDVTGEALATLVV 977
            VTNLEK +VEFENA+VL+TDQKI+++KEIIPLLE+ TQLR PL IIAED+TGEALATLVV
Sbjct: 240  VTNLEKSVVEFENARVLITDQKITSIKEIIPLLEQTTQLRCPLFIIAEDITGEALATLVV 299

Query: 978  NKLRGILNVAAIKAPGFGERRKAILQDMAILTGAELQAKDLGLLIEDVSVEQLGTARKVT 1157
            NKLRGI+NVAAIKAP FGERRKA+LQD+AI+TGAE  AKDLGLL+E+ +V+QLGTARK+T
Sbjct: 300  NKLRGIINVAAIKAPSFGERRKAVLQDIAIVTGAEFLAKDLGLLVENATVDQLGTARKIT 359

Query: 1158 ISQNSTTIISDAATKDEIQARIAQLKRELSESNSVYDSEKLAERIAKLSGGVAVIKVGAA 1337
            I Q +TT+I+DAA+KDEIQAR+AQLK+ELSE++S+YDSEKLAERIAKLSGGVAVIKVGAA
Sbjct: 360  IHQTTTTLIADAASKDEIQARVAQLKKELSETDSIYDSEKLAERIAKLSGGVAVIKVGAA 419

Query: 1338 TETELEDRKLRIEDAKNATFAAIEEGIVPGGGATYVHLSTIVPGIKDSLEDHDERLGADI 1517
            TETELEDR+LRIEDAKNATFAAIEEGIVPGGGA YVHLST VP IK+++EDHDERLGADI
Sbjct: 420  TETELEDRQLRIEDAKNATFAAIEEGIVPGGGAAYVHLSTFVPAIKETIEDHDERLGADI 479

Query: 1518 VQKALVAPAALIAQNAGVEGEVVVEKILDSDWEIGYNAMEDKYENLLESGVIDPAKVTRC 1697
            +QKAL+APA+LIA NAGVEGEVVVEKI DS+WE+GYNAM D YENL+E+GVIDPAKVTRC
Sbjct: 480  IQKALIAPASLIANNAGVEGEVVVEKIKDSEWEMGYNAMTDTYENLIEAGVIDPAKVTRC 539

Query: 1698 ALQNSASVAGMVLTTQAIVVE 1760
            ALQN+ASVAGMVLTTQAIVVE
Sbjct: 540  ALQNAASVAGMVLTTQAIVVE 560


>ref|XP_002328161.1| predicted protein [Populus trichocarpa]
            gi|566168009|ref|XP_006384931.1| RUBISCO SUBUNIT
            BINDING-protein ALPHA SUBUNIT [Populus trichocarpa]
            gi|550341699|gb|ERP62728.1| RUBISCO SUBUNIT
            BINDING-protein ALPHA SUBUNIT [Populus trichocarpa]
          Length = 587

 Score =  892 bits (2306), Expect = 0.0
 Identities = 470/569 (82%), Positives = 518/569 (91%), Gaps = 8/569 (1%)
 Frame = +3

Query: 78   MAAANAISVSAFVTSPRQRWSMRRRTS--------GGGYKPMVVRAKAKDIAFDQESRSS 233
            MA +NA+S ++ + SP+Q    RR           G   +   VRA AKDIAFDQ+SR++
Sbjct: 1    MATSNALSTASILCSPKQGGLRRRGNQQNNSRLNYGLSSRRFSVRANAKDIAFDQKSRAA 60

Query: 234  LQAGVEKLADAVGVTLGPRGRNVVLDEFGNPKVVNDGVTIARAIELADPMENAGAALIRE 413
            LQ+G++KLADAVG+TLGPRGRNVVLDEFG+PKVVNDGVTIARAIEL DPMENAGAALIRE
Sbjct: 61   LQSGIDKLADAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELPDPMENAGAALIRE 120

Query: 414  VASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSVKKGIDKTVQKLVEELEKKAR 593
            VASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVS+K+GIDKTVQ LVEELEKKAR
Sbjct: 121  VASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSIKRGIDKTVQGLVEELEKKAR 180

Query: 594  PVKGRADIKAVASVSAGNDEFVGDMIADAIDKVGPDGVLSIESSSSFETTVDVEEGMEID 773
            PVKGR DIKAVAS+SAGNDE +G MIADAIDKVGPDGVLSIESSSSFET V+VEEGMEID
Sbjct: 181  PVKGRDDIKAVASISAGNDELIGTMIADAIDKVGPDGVLSIESSSSFETVVEVEEGMEID 240

Query: 774  RGYISPQFVTNLEKMLVEFENAKVLVTDQKISTVKEIIPLLEKVTQLRTPLLIIAEDVTG 953
            RGYISPQFVTN EK++ EFENA+VL+TDQKI+ +K+IIPLLEK TQLR PLLIIAEDVTG
Sbjct: 241  RGYISPQFVTNPEKLICEFENARVLITDQKITAIKDIIPLLEKTTQLRAPLLIIAEDVTG 300

Query: 954  EALATLVVNKLRGILNVAAIKAPGFGERRKAILQDMAILTGAELQAKDLGLLIEDVSVEQ 1133
            EALATLVVNKLRG+LNVAAIKAPGFGERRKA+LQD+AILTGAE QA DLGL IE+ S+EQ
Sbjct: 301  EALATLVVNKLRGVLNVAAIKAPGFGERRKAMLQDIAILTGAEFQASDLGLSIENTSIEQ 360

Query: 1134 LGTARKVTISQNSTTIISDAATKDEIQARIAQLKRELSESNSVYDSEKLAERIAKLSGGV 1313
            LG ARKVTIS++STTII+DAA+KDE+QARIAQLK+ELSE++SVYDSEKLAERIAKLSGGV
Sbjct: 361  LGLARKVTISKDSTTIIADAASKDELQARIAQLKKELSETDSVYDSEKLAERIAKLSGGV 420

Query: 1314 AVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGATYVHLSTIVPGIKDSLEDH 1493
            AVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGA  VHLST VP IKD +ED 
Sbjct: 421  AVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSTCVPAIKDKIEDA 480

Query: 1494 DERLGADIVQKALVAPAALIAQNAGVEGEVVVEKILDSDWEIGYNAMEDKYENLLESGVI 1673
            DERLGADIVQKALV+PA+LIAQNAG+EGEVVVEK+  S+WEIGYNAM DKYENL+E+GVI
Sbjct: 481  DERLGADIVQKALVSPASLIAQNAGIEGEVVVEKLKASEWEIGYNAMTDKYENLMEAGVI 540

Query: 1674 DPAKVTRCALQNSASVAGMVLTTQAIVVE 1760
            DPAKVTRCALQNSASVAGMVLTTQAIVVE
Sbjct: 541  DPAKVTRCALQNSASVAGMVLTTQAIVVE 569


>ref|XP_004962429.1| PREDICTED: ruBisCO large subunit-binding protein subunit alpha,
            chloroplastic-like [Setaria italica]
          Length = 577

 Score =  890 bits (2301), Expect = 0.0
 Identities = 465/561 (82%), Positives = 517/561 (92%)
 Frame = +3

Query: 78   MAAANAISVSAFVTSPRQRWSMRRRTSGGGYKPMVVRAKAKDIAFDQESRSSLQAGVEKL 257
            MA+ANAIS ++ +    Q     RR   G  +  VVRA AKDIAFDQ+SR++LQAGVEKL
Sbjct: 1    MASANAISTASLLRPLSQ--GRARRARNGRSQRFVVRADAKDIAFDQKSRAALQAGVEKL 58

Query: 258  ADAVGVTLGPRGRNVVLDEFGNPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDS 437
            A+AVGVTLGPRGRNVVLDE+G PKVVNDGVTIARAIEL DPMENAGAALIREVASKTNDS
Sbjct: 59   ANAVGVTLGPRGRNVVLDEYGAPKVVNDGVTIARAIELYDPMENAGAALIREVASKTNDS 118

Query: 438  AGDGTTTASVLAREIIKLGLLSVTSGANPVSVKKGIDKTVQKLVEELEKKARPVKGRADI 617
            AGDGTTTASVLAREIIKLGLLSVTSGANPVS+KKGIDKTVQ L++ELE KARPVKG  DI
Sbjct: 119  AGDGTTTASVLAREIIKLGLLSVTSGANPVSLKKGIDKTVQGLIQELENKARPVKGGGDI 178

Query: 618  KAVASVSAGNDEFVGDMIADAIDKVGPDGVLSIESSSSFETTVDVEEGMEIDRGYISPQF 797
            KAVAS+SAGNDEF+G MIA+AIDKVGPDGVLSIESSSSFETTVDVEEGMEIDRGYISPQF
Sbjct: 179  KAVASISAGNDEFIGSMIAEAIDKVGPDGVLSIESSSSFETTVDVEEGMEIDRGYISPQF 238

Query: 798  VTNLEKMLVEFENAKVLVTDQKISTVKEIIPLLEKVTQLRTPLLIIAEDVTGEALATLVV 977
            VTNLEK +VEFENAKVL+TDQKI+++KEI+P+LEK TQLR PL IIAED+TGEALATLVV
Sbjct: 239  VTNLEKSIVEFENAKVLITDQKITSIKEILPILEKTTQLRAPLFIIAEDITGEALATLVV 298

Query: 978  NKLRGILNVAAIKAPGFGERRKAILQDMAILTGAELQAKDLGLLIEDVSVEQLGTARKVT 1157
            NKLRGILNVAAIKAP FGERRKAILQD+AI+TGAE  AKDLGLL+E+ + EQLGTARKVT
Sbjct: 299  NKLRGILNVAAIKAPSFGERRKAILQDIAIVTGAEFLAKDLGLLVENATEEQLGTARKVT 358

Query: 1158 ISQNSTTIISDAATKDEIQARIAQLKRELSESNSVYDSEKLAERIAKLSGGVAVIKVGAA 1337
            I Q +TT+I+DAA+KDEIQAR+AQLK+EL+E++SVYD+EKLAERIAKL+GGVAVIKVGAA
Sbjct: 359  IHQTTTTLIADAASKDEIQARVAQLKKELAETDSVYDTEKLAERIAKLAGGVAVIKVGAA 418

Query: 1338 TETELEDRKLRIEDAKNATFAAIEEGIVPGGGATYVHLSTIVPGIKDSLEDHDERLGADI 1517
            TETELEDR+LRIEDAKNATFAAIEEGIVPGGG  YVHLSTIVP IK+++ED DERLGADI
Sbjct: 419  TETELEDRQLRIEDAKNATFAAIEEGIVPGGGTAYVHLSTIVPSIKETIEDPDERLGADI 478

Query: 1518 VQKALVAPAALIAQNAGVEGEVVVEKILDSDWEIGYNAMEDKYENLLESGVIDPAKVTRC 1697
            +QKALVAPA+LIA NAGVEGEVVVEK+ +S+WE+GYNAM DKYENL+ESGVIDPAKVTRC
Sbjct: 479  IQKALVAPASLIAHNAGVEGEVVVEKVKESEWEVGYNAMTDKYENLMESGVIDPAKVTRC 538

Query: 1698 ALQNSASVAGMVLTTQAIVVE 1760
            ALQN+ASVAGMVLTTQAIVVE
Sbjct: 539  ALQNAASVAGMVLTTQAIVVE 559


>ref|XP_002313525.1| RUBISCO SUBUNIT BINDING-protein ALPHA SUBUNIT [Populus trichocarpa]
            gi|222849933|gb|EEE87480.1| RUBISCO SUBUNIT
            BINDING-protein ALPHA SUBUNIT [Populus trichocarpa]
          Length = 586

 Score =  890 bits (2301), Expect = 0.0
 Identities = 472/586 (80%), Positives = 523/586 (89%), Gaps = 8/586 (1%)
 Frame = +3

Query: 78   MAAANAISVSAFVTSPRQRWSMR--------RRTSGGGYKPMVVRAKAKDIAFDQESRSS 233
            MA +NA+S ++ + SP+Q    R        R   G   +   VRA AKDIAFDQ+SR++
Sbjct: 1    MATSNALSTASILCSPKQGGLRRKGNQQHNSRLNFGQSTRRFAVRANAKDIAFDQDSRAA 60

Query: 234  LQAGVEKLADAVGVTLGPRGRNVVLDEFGNPKVVNDGVTIARAIELADPMENAGAALIRE 413
            LQ+G++KLADAVG+TLGPRGRNVVLDEFG+PKVVNDGVTIARAIEL DPMENAGAALIRE
Sbjct: 61   LQSGIDKLADAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELPDPMENAGAALIRE 120

Query: 414  VASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSVKKGIDKTVQKLVEELEKKAR 593
            VASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVS+KKGIDKTVQ LVEELEK+AR
Sbjct: 121  VASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSIKKGIDKTVQGLVEELEKRAR 180

Query: 594  PVKGRADIKAVASVSAGNDEFVGDMIADAIDKVGPDGVLSIESSSSFETTVDVEEGMEID 773
            PVKGR DIKAVA++SAGNDE +G MIADAIDKVGPDGVLSIESSSSFETTV+VEEGMEID
Sbjct: 181  PVKGRDDIKAVATISAGNDELIGTMIADAIDKVGPDGVLSIESSSSFETTVEVEEGMEID 240

Query: 774  RGYISPQFVTNLEKMLVEFENAKVLVTDQKISTVKEIIPLLEKVTQLRTPLLIIAEDVTG 953
            RGYISPQFVTN EK++  FENA+VLVTDQKIS +K+IIPLLEK TQLR+PLLIIAEDVTG
Sbjct: 241  RGYISPQFVTNPEKLICVFENARVLVTDQKISAIKDIIPLLEKTTQLRSPLLIIAEDVTG 300

Query: 954  EALATLVVNKLRGILNVAAIKAPGFGERRKAILQDMAILTGAELQAKDLGLLIEDVSVEQ 1133
            EALATLVVNKLRGILNV+AIKAPGFGERRKA+LQD+AILTGAE QA DLGL IE+ S+EQ
Sbjct: 301  EALATLVVNKLRGILNVSAIKAPGFGERRKAMLQDIAILTGAEFQASDLGLSIENTSIEQ 360

Query: 1134 LGTARKVTISQNSTTIISDAATKDEIQARIAQLKRELSESNSVYDSEKLAERIAKLSGGV 1313
            LG ARKVTIS++STTII+DAA+KDE+QARIAQLK+ELSE++SVYDSEKLAERIAKLSGGV
Sbjct: 361  LGLARKVTISKDSTTIIADAASKDELQARIAQLKKELSETDSVYDSEKLAERIAKLSGGV 420

Query: 1314 AVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGATYVHLSTIVPGIKDSLEDH 1493
            AVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGA  VHLST VP IK+ ++D 
Sbjct: 421  AVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSTHVPAIKEKIKDA 480

Query: 1494 DERLGADIVQKALVAPAALIAQNAGVEGEVVVEKILDSDWEIGYNAMEDKYENLLESGVI 1673
            DERLGADIVQKALVAPA+LIAQNAG+EGEVVVEK+ +S+WE+GYNAM DKYENL+E+GVI
Sbjct: 481  DERLGADIVQKALVAPASLIAQNAGIEGEVVVEKLKESEWEMGYNAMTDKYENLVEAGVI 540

Query: 1674 DPAKVTRCALQNSASVAGMVLTTQAIVVEXXXXXXXXXXXXXGLAV 1811
            DPAKVTRCALQNSASVAGMVLTTQAIVVE             GL V
Sbjct: 541  DPAKVTRCALQNSASVAGMVLTTQAIVVEKPKPRTPAAASPQGLTV 586


>ref|XP_006488046.1| PREDICTED: ruBisCO large subunit-binding protein subunit alpha,
            chloroplastic-like [Citrus sinensis]
          Length = 582

 Score =  889 bits (2297), Expect = 0.0
 Identities = 469/565 (83%), Positives = 518/565 (91%), Gaps = 4/565 (0%)
 Frame = +3

Query: 78   MAAANAISVSAFVTSPRQRWSMRRRTSGGG----YKPMVVRAKAKDIAFDQESRSSLQAG 245
            MA+ANA+S ++ + SP+Q    RR     G    Y+   VRA AKDIAFDQ SR+++QAG
Sbjct: 1    MASANALSSASILCSPKQGSLRRRGNQNQGQRVNYRRFAVRASAKDIAFDQISRAAMQAG 60

Query: 246  VEKLADAVGVTLGPRGRNVVLDEFGNPKVVNDGVTIARAIELADPMENAGAALIREVASK 425
            ++KL+DAVG+TLGPRGRNVVLDEFG+PKVVNDGVTIARAIELADPMENAGAALIREVASK
Sbjct: 61   IDKLSDAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELADPMENAGAALIREVASK 120

Query: 426  TNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSVKKGIDKTVQKLVEELEKKARPVKG 605
            TNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVS+K+GIDKTV  LVEELEK+ARP++G
Sbjct: 121  TNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEG 180

Query: 606  RADIKAVASVSAGNDEFVGDMIADAIDKVGPDGVLSIESSSSFETTVDVEEGMEIDRGYI 785
            R DIKAVA++SAGND+ +G MIADAIDKVGPDGVLSIESSSSFETTV+VEEGMEIDRGYI
Sbjct: 181  RDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFETTVEVEEGMEIDRGYI 240

Query: 786  SPQFVTNLEKMLVEFENAKVLVTDQKISTVKEIIPLLEKVTQLRTPLLIIAEDVTGEALA 965
            SPQFVTN EK++VEFENA+VLVTDQKIS +K+IIPLLEK TQLR PLLIIAEDVTGEALA
Sbjct: 241  SPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALA 300

Query: 966  TLVVNKLRGILNVAAIKAPGFGERRKAILQDMAILTGAELQAKDLGLLIEDVSVEQLGTA 1145
            TLVVNKLRGILNVAAIKAPGFGERRKA+LQD+AI+TGAE QA DLGLLIE+ SVEQLGTA
Sbjct: 301  TLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTA 360

Query: 1146 RKVTISQNSTTIISDAATKDEIQARIAQLKRELSESNSVYDSEKLAERIAKLSGGVAVIK 1325
            RKVTI ++STTII+DAA+KDEIQARIAQLK+EL+E++SVYDSEKLAERIAKLSGGVAVIK
Sbjct: 361  RKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIK 420

Query: 1326 VGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGATYVHLSTIVPGIKDSLEDHDERL 1505
            VGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGA  VHLS  VP IKD LED DERL
Sbjct: 421  VGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERL 480

Query: 1506 GADIVQKALVAPAALIAQNAGVEGEVVVEKILDSDWEIGYNAMEDKYENLLESGVIDPAK 1685
            GADIVQKALVAPA+LIA NAGVEGEVVVEK+  S+W  GYNAM DKYEN+L++GVIDPAK
Sbjct: 481  GADIVQKALVAPASLIAHNAGVEGEVVVEKVKASEWTTGYNAMTDKYENMLQAGVIDPAK 540

Query: 1686 VTRCALQNSASVAGMVLTTQAIVVE 1760
            VTRCALQN+ASVAGMVLTTQAIVVE
Sbjct: 541  VTRCALQNAASVAGMVLTTQAIVVE 565


>ref|XP_004291571.1| PREDICTED: ruBisCO large subunit-binding protein subunit alpha,
            chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 585

 Score =  888 bits (2295), Expect = 0.0
 Identities = 470/585 (80%), Positives = 524/585 (89%), Gaps = 7/585 (1%)
 Frame = +3

Query: 78   MAAANAISVSAFVTSPRQRWSMR---RRTSGGGYKP----MVVRAKAKDIAFDQESRSSL 236
            MA+ NA++ ++ + SPRQ  S R   ++ +   YK       V+A AKDIAFDQ+SR ++
Sbjct: 1    MASVNALTSASILCSPRQSLSRRVSQQQKNRSNYKQSRGRFAVKATAKDIAFDQDSRRAM 60

Query: 237  QAGVEKLADAVGVTLGPRGRNVVLDEFGNPKVVNDGVTIARAIELADPMENAGAALIREV 416
            QAG++KLADAVG+TLGPRGRNVVLDE+G+PKVVNDGVTIARAIEL D MENAGAALIREV
Sbjct: 61   QAGIDKLADAVGLTLGPRGRNVVLDEYGSPKVVNDGVTIARAIELPDAMENAGAALIREV 120

Query: 417  ASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSVKKGIDKTVQKLVEELEKKARP 596
            ASKTNDSAGDGTTTAS+LAREIIKLGLLSVTSGANPVS+KKGIDKTVQ LVEELE K+RP
Sbjct: 121  ASKTNDSAGDGTTTASILAREIIKLGLLSVTSGANPVSIKKGIDKTVQALVEELENKSRP 180

Query: 597  VKGRADIKAVASVSAGNDEFVGDMIADAIDKVGPDGVLSIESSSSFETTVDVEEGMEIDR 776
            VKGR DIKAVAS+SAGNDE +G MIADAIDKVGPDGVLSIESSSSFETTV+VEEGMEIDR
Sbjct: 181  VKGRDDIKAVASISAGNDEQIGTMIADAIDKVGPDGVLSIESSSSFETTVEVEEGMEIDR 240

Query: 777  GYISPQFVTNLEKMLVEFENAKVLVTDQKISTVKEIIPLLEKVTQLRTPLLIIAEDVTGE 956
            GYISPQFVTN EK++VEFENA+VLVTDQKIS +K+IIPLLEK TQLR+PLLIIAEDVTGE
Sbjct: 241  GYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRSPLLIIAEDVTGE 300

Query: 957  ALATLVVNKLRGILNVAAIKAPGFGERRKAILQDMAILTGAELQAKDLGLLIEDVSVEQL 1136
            ALATLVVNKLRGILNVAAIKAPGFGERRKA+LQD+AILTGAE QA DLG+LIE+ +VEQL
Sbjct: 301  ALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAILTGAEFQANDLGMLIENTTVEQL 360

Query: 1137 GTARKVTISQNSTTIISDAATKDEIQARIAQLKRELSESNSVYDSEKLAERIAKLSGGVA 1316
            G ARKVTIS++STTII+D A+KDE+Q RIAQLK+ELSE++SVYDSEKLAERIAKLSGGVA
Sbjct: 361  GLARKVTISKDSTTIIADQASKDELQTRIAQLKKELSETDSVYDSEKLAERIAKLSGGVA 420

Query: 1317 VIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGATYVHLSTIVPGIKDSLEDHD 1496
            VIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGA  VHLST VP IKD LED D
Sbjct: 421  VIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSTCVPAIKDKLEDAD 480

Query: 1497 ERLGADIVQKALVAPAALIAQNAGVEGEVVVEKILDSDWEIGYNAMEDKYENLLESGVID 1676
            E+LGADIVQKALVAPAALIAQNAG+EGEVVVEK+ +S+WE+GYNAM D YENL+++GVID
Sbjct: 481  EKLGADIVQKALVAPAALIAQNAGIEGEVVVEKLKESEWEVGYNAMTDTYENLVDAGVID 540

Query: 1677 PAKVTRCALQNSASVAGMVLTTQAIVVEXXXXXXXXXXXXXGLAV 1811
            PAKVTRCALQN+ASVAGMVLTTQAIVVE             GL+V
Sbjct: 541  PAKVTRCALQNAASVAGMVLTTQAIVVEKAKPKSPAAAAAQGLSV 585


>ref|XP_006591127.1| PREDICTED: ruBisCO large subunit-binding protein subunit alpha,
            chloroplastic-like isoform X1 [Glycine max]
          Length = 584

 Score =  888 bits (2294), Expect = 0.0
 Identities = 468/584 (80%), Positives = 521/584 (89%), Gaps = 6/584 (1%)
 Frame = +3

Query: 78   MAAANAISVSAFVTSPRQRWSMRRRTSGG--GYKP----MVVRAKAKDIAFDQESRSSLQ 239
            MA+ NA+S ++ + SP ++   RR    G   Y+       V+A AK+IAFDQ SRS++Q
Sbjct: 1    MASTNALSSASILRSPNRQSLTRRANHNGRVNYRQPNSRFSVKASAKEIAFDQHSRSAMQ 60

Query: 240  AGVEKLADAVGVTLGPRGRNVVLDEFGNPKVVNDGVTIARAIELADPMENAGAALIREVA 419
            AG++KLADAVG+TLGPRGRNVVLDEFG+PKVVNDGVTIARAIEL DPMENAGAALIREVA
Sbjct: 61   AGIDKLADAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELPDPMENAGAALIREVA 120

Query: 420  SKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSVKKGIDKTVQKLVEELEKKARPV 599
            SKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVS+K+GIDKTVQ LVEELEKKARPV
Sbjct: 121  SKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVQGLVEELEKKARPV 180

Query: 600  KGRADIKAVASVSAGNDEFVGDMIADAIDKVGPDGVLSIESSSSFETTVDVEEGMEIDRG 779
            KG  DIKAVAS+SAGNDE +G MIA+AIDKVGPDGVLSIESSSSFETTV+VEEGMEIDRG
Sbjct: 181  KGGDDIKAVASISAGNDELIGQMIAEAIDKVGPDGVLSIESSSSFETTVEVEEGMEIDRG 240

Query: 780  YISPQFVTNLEKMLVEFENAKVLVTDQKISTVKEIIPLLEKVTQLRTPLLIIAEDVTGEA 959
            YISPQFVTN EK++VEFENA+VL+TDQKIS +K+IIPLLEK TQLR PLLIIAEDVTGEA
Sbjct: 241  YISPQFVTNPEKLIVEFENARVLITDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEA 300

Query: 960  LATLVVNKLRGILNVAAIKAPGFGERRKAILQDMAILTGAELQAKDLGLLIEDVSVEQLG 1139
            LATLVVNKLRGILNVAAIKAPGFGERRKA+LQD+AILTGAE QA DLGLL+E+ SVEQLG
Sbjct: 301  LATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAILTGAEFQASDLGLLVENTSVEQLG 360

Query: 1140 TARKVTISQNSTTIISDAATKDEIQARIAQLKRELSESNSVYDSEKLAERIAKLSGGVAV 1319
             ARK+TIS++STTII+DAATKDE+QAR+AQLK+ELS+++SVYD+EKLAERIAKLSGGVAV
Sbjct: 361  LARKITISKDSTTIIADAATKDELQARVAQLKKELSQTDSVYDTEKLAERIAKLSGGVAV 420

Query: 1320 IKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGATYVHLSTIVPGIKDSLEDHDE 1499
            IKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGG   VHLST VP +KD L+D DE
Sbjct: 421  IKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGTALVHLSTHVPALKDKLDDADE 480

Query: 1500 RLGADIVQKALVAPAALIAQNAGVEGEVVVEKILDSDWEIGYNAMEDKYENLLESGVIDP 1679
            RLGADIVQKAL+APAALIAQNAG+EGEVVVEKI   +WE+GYNAM D+YENL+E+GVIDP
Sbjct: 481  RLGADIVQKALIAPAALIAQNAGIEGEVVVEKIKSGEWEVGYNAMVDRYENLVEAGVIDP 540

Query: 1680 AKVTRCALQNSASVAGMVLTTQAIVVEXXXXXXXXXXXXXGLAV 1811
            AKVTRCALQN+ASVAGMVLTTQAIVVE             GL V
Sbjct: 541  AKVTRCALQNAASVAGMVLTTQAIVVEKPKPKAPVAGAPQGLTV 584


>ref|XP_006652052.1| PREDICTED: ruBisCO large subunit-binding protein subunit alpha,
            chloroplastic-like [Oryza brachyantha]
          Length = 582

 Score =  887 bits (2293), Expect = 0.0
 Identities = 466/541 (86%), Positives = 508/541 (93%), Gaps = 2/541 (0%)
 Frame = +3

Query: 144  RRRTSGGGYKPMV--VRAKAKDIAFDQESRSSLQAGVEKLADAVGVTLGPRGRNVVLDEF 317
            RR  S    +P V  VRA AKDIAFDQ SRSSLQAGVEKLA AVGVTLGPRGRNVVLDEF
Sbjct: 26   RRSASVPARRPRVGAVRASAKDIAFDQGSRSSLQAGVEKLASAVGVTLGPRGRNVVLDEF 85

Query: 318  GNPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGL 497
            G+PKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGL
Sbjct: 86   GSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGL 145

Query: 498  LSVTSGANPVSVKKGIDKTVQKLVEELEKKARPVKGRADIKAVASVSAGNDEFVGDMIAD 677
            LSVTSGANPVS+K+GIDKTVQ LV+ELEKK+RPVKG +DIKAVA++SAGND+FVG MIA+
Sbjct: 146  LSVTSGANPVSIKRGIDKTVQSLVQELEKKSRPVKGSSDIKAVAAISAGNDDFVGTMIAE 205

Query: 678  AIDKVGPDGVLSIESSSSFETTVDVEEGMEIDRGYISPQFVTNLEKMLVEFENAKVLVTD 857
            AIDKVGPDGVLSIESSSSFETTV+VEEGMEIDRGYISPQFVTN EK LVEFENA++LVTD
Sbjct: 206  AIDKVGPDGVLSIESSSSFETTVEVEEGMEIDRGYISPQFVTNPEKSLVEFENARILVTD 265

Query: 858  QKISTVKEIIPLLEKVTQLRTPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGER 1037
            QKIS++KEI+PLLE+ TQLR PLLIIAEDV GEALATLVVNKLRGILNVAAIKAPGFGER
Sbjct: 266  QKISSIKEILPLLEQTTQLRAPLLIIAEDVAGEALATLVVNKLRGILNVAAIKAPGFGER 325

Query: 1038 RKAILQDMAILTGAELQAKDLGLLIEDVSVEQLGTARKVTISQNSTTIISDAATKDEIQA 1217
            RKA+LQD+AI+TGAE QAKDLGLL+E+ +VEQLG ARKV ISQ++TTII+D ATKDEIQA
Sbjct: 326  RKALLQDIAIVTGAEFQAKDLGLLVENTTVEQLGIARKVKISQSATTIIADVATKDEIQA 385

Query: 1218 RIAQLKRELSESNSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATF 1397
            RIAQLKRELS+++SVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATF
Sbjct: 386  RIAQLKRELSQTDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATF 445

Query: 1398 AAIEEGIVPGGGATYVHLSTIVPGIKDSLEDHDERLGADIVQKALVAPAALIAQNAGVEG 1577
            AAIEEGIVPGGGA YVHLST VP IK+ L+D +ERLGADI+QKALVAPAALIA NAGVEG
Sbjct: 446  AAIEEGIVPGGGAAYVHLSTFVPAIKEKLDDPEERLGADIIQKALVAPAALIAHNAGVEG 505

Query: 1578 EVVVEKILDSDWEIGYNAMEDKYENLLESGVIDPAKVTRCALQNSASVAGMVLTTQAIVV 1757
            EV+VEKI DS+WE+GYNAM DK+ENL+++GVIDPAKVTRCALQN+ASVAGMVLTTQAIVV
Sbjct: 506  EVIVEKIKDSEWEVGYNAMADKHENLVQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVV 565

Query: 1758 E 1760
            E
Sbjct: 566  E 566


>gb|EMJ06181.1| hypothetical protein PRUPE_ppa003328mg [Prunus persica]
          Length = 585

 Score =  887 bits (2293), Expect = 0.0
 Identities = 471/587 (80%), Positives = 524/587 (89%), Gaps = 9/587 (1%)
 Frame = +3

Query: 78   MAAANAISVSAFVTSPRQRWSMRRRTSGG-----GYKP----MVVRAKAKDIAFDQESRS 230
            MA+ANA++ +A + SP Q  S+RRR +        YK      VV+A AKDIAFDQ SR 
Sbjct: 1    MASANALTSAAILCSPSQ--SLRRRVNQQQNNRVNYKQSRGRFVVKAAAKDIAFDQNSRR 58

Query: 231  SLQAGVEKLADAVGVTLGPRGRNVVLDEFGNPKVVNDGVTIARAIELADPMENAGAALIR 410
            +LQAG++KLADAVG+TLGPRGRNVVLDE+G+PKVVNDGVTIARAIEL D MENAGAALIR
Sbjct: 59   ALQAGIDKLADAVGLTLGPRGRNVVLDEYGSPKVVNDGVTIARAIELPDAMENAGAALIR 118

Query: 411  EVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSVKKGIDKTVQKLVEELEKKA 590
            EVASKTNDSAGDGTTTAS+LAREIIKLGLLSVTSGANPVS+KKGIDKTV  L+EELE K+
Sbjct: 119  EVASKTNDSAGDGTTTASILAREIIKLGLLSVTSGANPVSIKKGIDKTVHGLIEELENKS 178

Query: 591  RPVKGRADIKAVASVSAGNDEFVGDMIADAIDKVGPDGVLSIESSSSFETTVDVEEGMEI 770
            RPVKGR D+KAVAS+SAGNDE++G MIADAIDKVGPDGVLSIESSSSFETTV+VEEGMEI
Sbjct: 179  RPVKGRDDVKAVASISAGNDEYIGTMIADAIDKVGPDGVLSIESSSSFETTVEVEEGMEI 238

Query: 771  DRGYISPQFVTNLEKMLVEFENAKVLVTDQKISTVKEIIPLLEKVTQLRTPLLIIAEDVT 950
            DRGYISPQFVTN EK++VEFENA+VL+TDQKI+ +K+IIPLLEK TQLR PLLIIAEDV+
Sbjct: 239  DRGYISPQFVTNPEKLIVEFENARVLITDQKITAIKDIIPLLEKTTQLRAPLLIIAEDVS 298

Query: 951  GEALATLVVNKLRGILNVAAIKAPGFGERRKAILQDMAILTGAELQAKDLGLLIEDVSVE 1130
            GEALATLVVNKLRGI+NVAAIKAPGFGERRKA+LQD+AILTGAE QA DLGLL+E+ SVE
Sbjct: 299  GEALATLVVNKLRGIINVAAIKAPGFGERRKALLQDIAILTGAEFQANDLGLLVENTSVE 358

Query: 1131 QLGTARKVTISQNSTTIISDAATKDEIQARIAQLKRELSESNSVYDSEKLAERIAKLSGG 1310
            QLG ARKVTIS++STTII+DAA+KDE+QARIAQLK+ELSE++SVYDSEKLAERIAKLSGG
Sbjct: 359  QLGLARKVTISKDSTTIIADAASKDELQARIAQLKKELSETDSVYDSEKLAERIAKLSGG 418

Query: 1311 VAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGATYVHLSTIVPGIKDSLED 1490
            VAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGA  VHLST VP +K  L D
Sbjct: 419  VAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSTYVPALKQKLVD 478

Query: 1491 HDERLGADIVQKALVAPAALIAQNAGVEGEVVVEKILDSDWEIGYNAMEDKYENLLESGV 1670
             DE+LGADIVQKALV+PAALIAQNAG+EGEVVVEKI DS+WE+GYNAM DKYENL+E+GV
Sbjct: 479  ADEQLGADIVQKALVSPAALIAQNAGIEGEVVVEKIKDSEWEVGYNAMTDKYENLVEAGV 538

Query: 1671 IDPAKVTRCALQNSASVAGMVLTTQAIVVEXXXXXXXXXXXXXGLAV 1811
            IDPAKVTRCALQN+ASVAGMVLTTQAIVVE             GL V
Sbjct: 539  IDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKPKSPAAAAAQGLTV 585


>ref|XP_002440887.1| hypothetical protein SORBIDRAFT_09g014430 [Sorghum bicolor]
            gi|241946172|gb|EES19317.1| hypothetical protein
            SORBIDRAFT_09g014430 [Sorghum bicolor]
          Length = 577

 Score =  887 bits (2291), Expect = 0.0
 Identities = 462/561 (82%), Positives = 516/561 (91%)
 Frame = +3

Query: 78   MAAANAISVSAFVTSPRQRWSMRRRTSGGGYKPMVVRAKAKDIAFDQESRSSLQAGVEKL 257
            MA+ANAIS ++ ++   Q     RR   G  +  VVRA+AKDIAFDQ+SR++LQAGVEKL
Sbjct: 1    MASANAISTASLISPLSQ--GRARRARNGRSQRFVVRAEAKDIAFDQKSRAALQAGVEKL 58

Query: 258  ADAVGVTLGPRGRNVVLDEFGNPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDS 437
            A+AVGVTLGPRGRNVVLDE+G+PKVVNDGVTIARAIEL DPMENAGAALIREVASKTNDS
Sbjct: 59   ANAVGVTLGPRGRNVVLDEYGSPKVVNDGVTIARAIELYDPMENAGAALIREVASKTNDS 118

Query: 438  AGDGTTTASVLAREIIKLGLLSVTSGANPVSVKKGIDKTVQKLVEELEKKARPVKGRADI 617
            AGDGTTTASVLAREIIKLGLLSVTSGANPVS+KKGIDKTVQ L++ELE KARPVKG  DI
Sbjct: 119  AGDGTTTASVLAREIIKLGLLSVTSGANPVSLKKGIDKTVQGLIQELENKARPVKGGGDI 178

Query: 618  KAVASVSAGNDEFVGDMIADAIDKVGPDGVLSIESSSSFETTVDVEEGMEIDRGYISPQF 797
            KAVAS+SAGNDEF+G MIA+AIDKVGPDGVLSIESSSSFETTV+VEEGMEIDRGYISPQF
Sbjct: 179  KAVASISAGNDEFIGSMIAEAIDKVGPDGVLSIESSSSFETTVEVEEGMEIDRGYISPQF 238

Query: 798  VTNLEKMLVEFENAKVLVTDQKISTVKEIIPLLEKVTQLRTPLLIIAEDVTGEALATLVV 977
            VTNLEK +VEFENAKVL+TDQKIS++KEI+P+LEK TQLR PL IIAED+TGEALATLVV
Sbjct: 239  VTNLEKSIVEFENAKVLITDQKISSIKEILPILEKTTQLRAPLFIIAEDITGEALATLVV 298

Query: 978  NKLRGILNVAAIKAPGFGERRKAILQDMAILTGAELQAKDLGLLIEDVSVEQLGTARKVT 1157
            NKLRGILNVAAIKAP FGERRKA+LQD+AI+TGAE  AKDLGLL+E+ +  QLGTARKVT
Sbjct: 299  NKLRGILNVAAIKAPSFGERRKAVLQDIAIVTGAEFLAKDLGLLVENATEAQLGTARKVT 358

Query: 1158 ISQNSTTIISDAATKDEIQARIAQLKRELSESNSVYDSEKLAERIAKLSGGVAVIKVGAA 1337
            I Q +TT+I+DAA+KDEIQAR+AQLK+EL+E++SVYD+EKLAERIAKL+GGVAVIKVGAA
Sbjct: 359  IHQTTTTLIADAASKDEIQARVAQLKKELAETDSVYDTEKLAERIAKLAGGVAVIKVGAA 418

Query: 1338 TETELEDRKLRIEDAKNATFAAIEEGIVPGGGATYVHLSTIVPGIKDSLEDHDERLGADI 1517
            TETELEDR+LRIEDAKNATFAAIEEGIVPGGG  YVHLST+VP IK+ +ED DERLGADI
Sbjct: 419  TETELEDRQLRIEDAKNATFAAIEEGIVPGGGTAYVHLSTVVPSIKEKIEDPDERLGADI 478

Query: 1518 VQKALVAPAALIAQNAGVEGEVVVEKILDSDWEIGYNAMEDKYENLLESGVIDPAKVTRC 1697
            +QKALVAPA+LIA NAGVEGEVVVEKI DS WE+GYNAM D YENL+E+GVIDPAKVTRC
Sbjct: 479  IQKALVAPASLIAHNAGVEGEVVVEKIKDSVWEVGYNAMTDTYENLIEAGVIDPAKVTRC 538

Query: 1698 ALQNSASVAGMVLTTQAIVVE 1760
            ALQN+ASVAGMVLTTQAIVVE
Sbjct: 539  ALQNAASVAGMVLTTQAIVVE 559


>gb|EOY34441.1| RuBisCO large subunit-binding protein subunit alpha isoform 2
            [Theobroma cacao]
          Length = 586

 Score =  885 bits (2288), Expect = 0.0
 Identities = 466/569 (81%), Positives = 519/569 (91%), Gaps = 8/569 (1%)
 Frame = +3

Query: 78   MAAANAISVSAFVTSPRQRWSMRRRTSGG--------GYKPMVVRAKAKDIAFDQESRSS 233
            MA+ANA+S ++ + SP+Q    RR             G     VRA AK+IAFDQ SR+S
Sbjct: 1    MASANALSSASILCSPKQGGLRRRGNQQQNQRLNYRQGNSRFAVRASAKEIAFDQSSRTS 60

Query: 234  LQAGVEKLADAVGVTLGPRGRNVVLDEFGNPKVVNDGVTIARAIELADPMENAGAALIRE 413
            +QAG++KLADAVG+TLGPRGRNVVLDEFG+PKVVNDGVTIARAIEL D MENAGAALIRE
Sbjct: 61   MQAGIDKLADAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELPDAMENAGAALIRE 120

Query: 414  VASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSVKKGIDKTVQKLVEELEKKAR 593
            VASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSVK+GIDKTVQ LVEELEKKAR
Sbjct: 121  VASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSVKRGIDKTVQGLVEELEKKAR 180

Query: 594  PVKGRADIKAVASVSAGNDEFVGDMIADAIDKVGPDGVLSIESSSSFETTVDVEEGMEID 773
            PVKGR DI+AVA++SAGND+ +G MIADAIDKVGPDGVLSIESSSSFETTVDVEEGMEID
Sbjct: 181  PVKGRDDIEAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFETTVDVEEGMEID 240

Query: 774  RGYISPQFVTNLEKMLVEFENAKVLVTDQKISTVKEIIPLLEKVTQLRTPLLIIAEDVTG 953
            RGYISPQFVTN EK++ EFENA+VL+TDQKIS +K+IIPLLEK TQLR+PLLIIAEDVTG
Sbjct: 241  RGYISPQFVTNPEKLICEFENARVLITDQKISAIKDIIPLLEKTTQLRSPLLIIAEDVTG 300

Query: 954  EALATLVVNKLRGILNVAAIKAPGFGERRKAILQDMAILTGAELQAKDLGLLIEDVSVEQ 1133
            EALATLVVNKLRGILNVAAIKAPGFGERRKA+LQD+AILTGAE QA DLGLL+E+ SVEQ
Sbjct: 301  EALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAILTGAEFQASDLGLLVENTSVEQ 360

Query: 1134 LGTARKVTISQNSTTIISDAATKDEIQARIAQLKRELSESNSVYDSEKLAERIAKLSGGV 1313
            LG ARKV IS++ST +I++AA+KDEIQAR+AQLK+EL+E++SVYD+EKLAERIAKLSGGV
Sbjct: 361  LGIARKVIISKDSTQLIAEAASKDEIQARVAQLKKELAETDSVYDTEKLAERIAKLSGGV 420

Query: 1314 AVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGATYVHLSTIVPGIKDSLEDH 1493
            AVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGA +VHL+T VP IKD LE+ 
Sbjct: 421  AVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAAFVHLTTCVPAIKDKLEEA 480

Query: 1494 DERLGADIVQKALVAPAALIAQNAGVEGEVVVEKILDSDWEIGYNAMEDKYENLLESGVI 1673
            DERLGADIVQKALVAPA+LIAQNAG+EGEVVVEK+ +S+WEIGYNAM DKYENLLE+GVI
Sbjct: 481  DERLGADIVQKALVAPASLIAQNAGMEGEVVVEKVKNSEWEIGYNAMTDKYENLLEAGVI 540

Query: 1674 DPAKVTRCALQNSASVAGMVLTTQAIVVE 1760
            DPAKVTRCALQN++SVAGMVLTTQAIVVE
Sbjct: 541  DPAKVTRCALQNASSVAGMVLTTQAIVVE 569


>gb|EOY34440.1| RuBisCO large subunit-binding protein subunit alpha isoform 1
            [Theobroma cacao]
          Length = 602

 Score =  885 bits (2288), Expect = 0.0
 Identities = 466/569 (81%), Positives = 519/569 (91%), Gaps = 8/569 (1%)
 Frame = +3

Query: 78   MAAANAISVSAFVTSPRQRWSMRRRTSGG--------GYKPMVVRAKAKDIAFDQESRSS 233
            MA+ANA+S ++ + SP+Q    RR             G     VRA AK+IAFDQ SR+S
Sbjct: 1    MASANALSSASILCSPKQGGLRRRGNQQQNQRLNYRQGNSRFAVRASAKEIAFDQSSRTS 60

Query: 234  LQAGVEKLADAVGVTLGPRGRNVVLDEFGNPKVVNDGVTIARAIELADPMENAGAALIRE 413
            +QAG++KLADAVG+TLGPRGRNVVLDEFG+PKVVNDGVTIARAIEL D MENAGAALIRE
Sbjct: 61   MQAGIDKLADAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELPDAMENAGAALIRE 120

Query: 414  VASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSVKKGIDKTVQKLVEELEKKAR 593
            VASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSVK+GIDKTVQ LVEELEKKAR
Sbjct: 121  VASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSVKRGIDKTVQGLVEELEKKAR 180

Query: 594  PVKGRADIKAVASVSAGNDEFVGDMIADAIDKVGPDGVLSIESSSSFETTVDVEEGMEID 773
            PVKGR DI+AVA++SAGND+ +G MIADAIDKVGPDGVLSIESSSSFETTVDVEEGMEID
Sbjct: 181  PVKGRDDIEAVATISAGNDDLIGTMIADAIDKVGPDGVLSIESSSSFETTVDVEEGMEID 240

Query: 774  RGYISPQFVTNLEKMLVEFENAKVLVTDQKISTVKEIIPLLEKVTQLRTPLLIIAEDVTG 953
            RGYISPQFVTN EK++ EFENA+VL+TDQKIS +K+IIPLLEK TQLR+PLLIIAEDVTG
Sbjct: 241  RGYISPQFVTNPEKLICEFENARVLITDQKISAIKDIIPLLEKTTQLRSPLLIIAEDVTG 300

Query: 954  EALATLVVNKLRGILNVAAIKAPGFGERRKAILQDMAILTGAELQAKDLGLLIEDVSVEQ 1133
            EALATLVVNKLRGILNVAAIKAPGFGERRKA+LQD+AILTGAE QA DLGLL+E+ SVEQ
Sbjct: 301  EALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAILTGAEFQASDLGLLVENTSVEQ 360

Query: 1134 LGTARKVTISQNSTTIISDAATKDEIQARIAQLKRELSESNSVYDSEKLAERIAKLSGGV 1313
            LG ARKV IS++ST +I++AA+KDEIQAR+AQLK+EL+E++SVYD+EKLAERIAKLSGGV
Sbjct: 361  LGIARKVIISKDSTQLIAEAASKDEIQARVAQLKKELAETDSVYDTEKLAERIAKLSGGV 420

Query: 1314 AVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGATYVHLSTIVPGIKDSLEDH 1493
            AVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGA +VHL+T VP IKD LE+ 
Sbjct: 421  AVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAAFVHLTTCVPAIKDKLEEA 480

Query: 1494 DERLGADIVQKALVAPAALIAQNAGVEGEVVVEKILDSDWEIGYNAMEDKYENLLESGVI 1673
            DERLGADIVQKALVAPA+LIAQNAG+EGEVVVEK+ +S+WEIGYNAM DKYENLLE+GVI
Sbjct: 481  DERLGADIVQKALVAPASLIAQNAGMEGEVVVEKVKNSEWEIGYNAMTDKYENLLEAGVI 540

Query: 1674 DPAKVTRCALQNSASVAGMVLTTQAIVVE 1760
            DPAKVTRCALQN++SVAGMVLTTQAIVVE
Sbjct: 541  DPAKVTRCALQNASSVAGMVLTTQAIVVE 569


>gb|AAP44754.1| putative rubisco subunit binding-protein alpha subunit precursor (60
            kDa chaperonin alpha subunit) [Oryza sativa Japonica
            Group] gi|108712216|gb|ABG00011.1| RuBisCO subunit
            binding-protein alpha subunit, chloroplast precursor,
            putative, expressed [Oryza sativa Japonica Group]
            gi|125588715|gb|EAZ29379.1| hypothetical protein
            OsJ_13451 [Oryza sativa Japonica Group]
            gi|313575771|gb|ADR66965.1| 60 kDa chaperonin alpha
            subunit [Oryza sativa Japonica Group]
          Length = 584

 Score =  885 bits (2286), Expect = 0.0
 Identities = 470/562 (83%), Positives = 513/562 (91%), Gaps = 1/562 (0%)
 Frame = +3

Query: 78   MAAANAISVSAFVTSPRQRWSMRRRTSGGGYKPM-VVRAKAKDIAFDQESRSSLQAGVEK 254
            M +  A S S F+   R R S R  +  G  + + VVRA AK+IAFDQ SRSSLQAGVEK
Sbjct: 4    MPSTCASSSSLFLLLRRDRRSSRSASLPGPARRLGVVRASAKEIAFDQGSRSSLQAGVEK 63

Query: 255  LADAVGVTLGPRGRNVVLDEFGNPKVVNDGVTIARAIELADPMENAGAALIREVASKTND 434
            LA AV VTLGPRGRNVVLDEFG+PKVVNDGVTIARAIELADPMENAGAALIREVASKTND
Sbjct: 64   LAAAVAVTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTND 123

Query: 435  SAGDGTTTASVLAREIIKLGLLSVTSGANPVSVKKGIDKTVQKLVEELEKKARPVKGRAD 614
            SAGDGTTTASVLAREIIKLGLLSVTSGANPVS+KKGIDKTV  LVEELEKK+RPVKG  D
Sbjct: 124  SAGDGTTTASVLAREIIKLGLLSVTSGANPVSIKKGIDKTVHSLVEELEKKSRPVKGSGD 183

Query: 615  IKAVASVSAGNDEFVGDMIADAIDKVGPDGVLSIESSSSFETTVDVEEGMEIDRGYISPQ 794
            IKAVA++SAGND+FVG MIA+AIDKVGPDGVLSIESSSSFETTV+VEEGMEIDRGYISPQ
Sbjct: 184  IKAVAAISAGNDDFVGTMIAEAIDKVGPDGVLSIESSSSFETTVEVEEGMEIDRGYISPQ 243

Query: 795  FVTNLEKMLVEFENAKVLVTDQKISTVKEIIPLLEKVTQLRTPLLIIAEDVTGEALATLV 974
            FVTN EK LVEFENA++LVTDQKIS++KEIIPLLE+ TQLR PLLIIAEDV GEALATLV
Sbjct: 244  FVTNPEKSLVEFENARILVTDQKISSIKEIIPLLEQTTQLRAPLLIIAEDVAGEALATLV 303

Query: 975  VNKLRGILNVAAIKAPGFGERRKAILQDMAILTGAELQAKDLGLLIEDVSVEQLGTARKV 1154
            VNKLRGILNVAAIKAPGFGERRKA+LQD+AI+TGAE QAKDLGLL+E  +VEQLG ARKV
Sbjct: 304  VNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAKDLGLLVESTTVEQLGIARKV 363

Query: 1155 TISQNSTTIISDAATKDEIQARIAQLKRELSESNSVYDSEKLAERIAKLSGGVAVIKVGA 1334
            TISQ+STTII+D ATKDEIQARIAQLKRELS+++S YDSEKLAERIAKLSGGVAVIKVGA
Sbjct: 364  TISQSSTTIIADVATKDEIQARIAQLKRELSQTDSAYDSEKLAERIAKLSGGVAVIKVGA 423

Query: 1335 ATETELEDRKLRIEDAKNATFAAIEEGIVPGGGATYVHLSTIVPGIKDSLEDHDERLGAD 1514
            ATETELEDRKLRIEDAKNATFAAIEEGIVPGGGA YVHLS  VP IK+ L+D +ERLGAD
Sbjct: 424  ATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAAYVHLSKFVPAIKEKLDDPEERLGAD 483

Query: 1515 IVQKALVAPAALIAQNAGVEGEVVVEKILDSDWEIGYNAMEDKYENLLESGVIDPAKVTR 1694
            I+QKALVAPAALIA NAGVEGEV+VEKI +S+WE+GYNAM D++ENL+++GVIDPAKVTR
Sbjct: 484  IIQKALVAPAALIAHNAGVEGEVIVEKIKESEWEVGYNAMADRHENLVQAGVIDPAKVTR 543

Query: 1695 CALQNSASVAGMVLTTQAIVVE 1760
            CALQN+ASVAGMVLTTQAIVVE
Sbjct: 544  CALQNAASVAGMVLTTQAIVVE 565


>ref|XP_003558045.1| PREDICTED: ruBisCO large subunit-binding protein subunit alpha,
            chloroplastic-like [Brachypodium distachyon]
          Length = 587

 Score =  884 bits (2284), Expect = 0.0
 Identities = 461/526 (87%), Positives = 501/526 (95%)
 Frame = +3

Query: 183  VRAKAKDIAFDQESRSSLQAGVEKLADAVGVTLGPRGRNVVLDEFGNPKVVNDGVTIARA 362
            VRA AKDIAFDQ SRS+LQAGVEKLA AVGVTLGPRGRNVVLDEFG+PKVVNDGVTIARA
Sbjct: 46   VRASAKDIAFDQASRSALQAGVEKLAAAVGVTLGPRGRNVVLDEFGSPKVVNDGVTIARA 105

Query: 363  IELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSVKKG 542
            IELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVS+KKG
Sbjct: 106  IELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSIKKG 165

Query: 543  IDKTVQKLVEELEKKARPVKGRADIKAVASVSAGNDEFVGDMIADAIDKVGPDGVLSIES 722
            IDKTV  LVEELEKK+RPVKG  DIKA+A++SAGND+FVG MIA+AI+KVGPDGVLSIES
Sbjct: 166  IDKTVLSLVEELEKKSRPVKGSGDIKAIAAISAGNDDFVGTMIAEAIEKVGPDGVLSIES 225

Query: 723  SSSFETTVDVEEGMEIDRGYISPQFVTNLEKMLVEFENAKVLVTDQKISTVKEIIPLLEK 902
            SSSFETTV+VEEGMEIDRGYISPQFVTN EK +VEFENA++LVTDQKIS++KEI+PLLE+
Sbjct: 226  SSSFETTVEVEEGMEIDRGYISPQFVTNPEKSVVEFENARILVTDQKISSIKEILPLLEQ 285

Query: 903  VTQLRTPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKAILQDMAILTGAE 1082
             TQLR PLLIIAEDV+GEALATLVVNKLRGILNVAAIKAPGFGERRKA+LQD+AI+TGAE
Sbjct: 286  TTQLRAPLLIIAEDVSGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAE 345

Query: 1083 LQAKDLGLLIEDVSVEQLGTARKVTISQNSTTIISDAATKDEIQARIAQLKRELSESNSV 1262
             QAKDLGLL+E  +VEQLG ARKVTISQ+STTII+D ATKDEIQARIAQLKRELS+++SV
Sbjct: 346  FQAKDLGLLVEKTTVEQLGIARKVTISQSSTTIIADVATKDEIQARIAQLKRELSQTDSV 405

Query: 1263 YDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGATY 1442
            YDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGA Y
Sbjct: 406  YDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAAY 465

Query: 1443 VHLSTIVPGIKDSLEDHDERLGADIVQKALVAPAALIAQNAGVEGEVVVEKILDSDWEIG 1622
            VHLST VP IK+ L+D +ERLGADI+QKALVAPAALIAQNAGVEGEV+VEKI DS+WE G
Sbjct: 466  VHLSTFVPAIKEKLDDPEERLGADIIQKALVAPAALIAQNAGVEGEVIVEKIKDSEWEFG 525

Query: 1623 YNAMEDKYENLLESGVIDPAKVTRCALQNSASVAGMVLTTQAIVVE 1760
            YNAM DK+ENL+E+GVIDPAKVTRCALQN+ASVAGMVLTTQAIVV+
Sbjct: 526  YNAMTDKHENLVEAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVD 571


>gb|EAY92674.1| hypothetical protein OsI_14427 [Oryza sativa Indica Group]
          Length = 584

 Score =  884 bits (2283), Expect = 0.0
 Identities = 469/562 (83%), Positives = 513/562 (91%), Gaps = 1/562 (0%)
 Frame = +3

Query: 78   MAAANAISVSAFVTSPRQRWSMRRRTSGGGYKPM-VVRAKAKDIAFDQESRSSLQAGVEK 254
            M +  A S S F+   + R S R  +  G  + + VVRA AK+IAFDQ SRSSLQAGVEK
Sbjct: 4    MPSTCASSSSLFLLLRKDRRSSRSASLPGPARRLGVVRASAKEIAFDQGSRSSLQAGVEK 63

Query: 255  LADAVGVTLGPRGRNVVLDEFGNPKVVNDGVTIARAIELADPMENAGAALIREVASKTND 434
            LA AV VTLGPRGRNVVLDEFG+PKVVNDGVTIARAIELADPMENAGAALIREVASKTND
Sbjct: 64   LAAAVAVTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTND 123

Query: 435  SAGDGTTTASVLAREIIKLGLLSVTSGANPVSVKKGIDKTVQKLVEELEKKARPVKGRAD 614
            SAGDGTTTASVLAREIIKLGLLSVTSGANPVS+KKGIDKTV  LVEELEKK+RPVKG  D
Sbjct: 124  SAGDGTTTASVLAREIIKLGLLSVTSGANPVSIKKGIDKTVHSLVEELEKKSRPVKGSGD 183

Query: 615  IKAVASVSAGNDEFVGDMIADAIDKVGPDGVLSIESSSSFETTVDVEEGMEIDRGYISPQ 794
            IKAVA++SAGND+FVG MIA+AIDKVGPDGVLSIESSSSFETTV+VEEGMEIDRGYISPQ
Sbjct: 184  IKAVAAISAGNDDFVGTMIAEAIDKVGPDGVLSIESSSSFETTVEVEEGMEIDRGYISPQ 243

Query: 795  FVTNLEKMLVEFENAKVLVTDQKISTVKEIIPLLEKVTQLRTPLLIIAEDVTGEALATLV 974
            FVTN EK LVEFENA++LVTDQKIS++KEIIPLLE+ TQLR PLLIIAEDV GEALATLV
Sbjct: 244  FVTNPEKSLVEFENARILVTDQKISSIKEIIPLLEQTTQLRAPLLIIAEDVAGEALATLV 303

Query: 975  VNKLRGILNVAAIKAPGFGERRKAILQDMAILTGAELQAKDLGLLIEDVSVEQLGTARKV 1154
            VNKLRGILNVAAIKAPGFGERRKA+LQD+AI+TGAE QAKDLGLL+E  +VEQLG ARKV
Sbjct: 304  VNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAKDLGLLVESTTVEQLGIARKV 363

Query: 1155 TISQNSTTIISDAATKDEIQARIAQLKRELSESNSVYDSEKLAERIAKLSGGVAVIKVGA 1334
            TISQ+STTII+D ATKDEIQARIAQLKRELS+++S YDSEKLAERIAKLSGGVAVIKVGA
Sbjct: 364  TISQSSTTIIADVATKDEIQARIAQLKRELSQTDSAYDSEKLAERIAKLSGGVAVIKVGA 423

Query: 1335 ATETELEDRKLRIEDAKNATFAAIEEGIVPGGGATYVHLSTIVPGIKDSLEDHDERLGAD 1514
            ATETELEDRKLRIEDAKNATFAAIEEGIVPGGGA YVHLS  VP IK+ L+D +ERLGAD
Sbjct: 424  ATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAAYVHLSKFVPAIKEKLDDPEERLGAD 483

Query: 1515 IVQKALVAPAALIAQNAGVEGEVVVEKILDSDWEIGYNAMEDKYENLLESGVIDPAKVTR 1694
            I+QKALVAPAALIA NAGVEGEV+VEKI +S+WE+GYNAM D++ENL+++GVIDPAKVTR
Sbjct: 484  IIQKALVAPAALIAHNAGVEGEVIVEKIKESEWEVGYNAMADRHENLVQAGVIDPAKVTR 543

Query: 1695 CALQNSASVAGMVLTTQAIVVE 1760
            CALQN+ASVAGMVLTTQAIVVE
Sbjct: 544  CALQNAASVAGMVLTTQAIVVE 565