BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00003923
         (2651 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMJ12507.1| hypothetical protein PRUPE_ppa001468mg [Prunus pe...   879   0.0  
gb|AAT39274.1| unknown protein [Oryza sativa Japonica Group] gi|...   877   0.0  
gb|EAY98938.1| hypothetical protein OsI_20893 [Oryza sativa Indi...   876   0.0  
ref|XP_004963613.1| PREDICTED: chloroplastic group IIA intron sp...   870   0.0  
gb|EOY21034.1| CRS1 / YhbY domain-containing protein [Theobroma ...   869   0.0  
ref|XP_003565949.1| PREDICTED: chloroplastic group IIA intron sp...   862   0.0  
ref|XP_004300521.1| PREDICTED: chloroplastic group IIA intron sp...   854   0.0  
dbj|BAK03116.1| predicted protein [Hordeum vulgare subsp. vulgare]    852   0.0  
ref|XP_006655563.1| PREDICTED: chloroplastic group IIA intron sp...   841   0.0  
gb|EXB56911.1| Chloroplastic group IIA intron splicing facilitat...   838   0.0  
ref|XP_002317913.2| hypothetical protein POPTR_0012s05260g [Popu...   838   0.0  
emb|CBI15459.3| unnamed protein product [Vitis vinifera]              836   0.0  
emb|CAN72582.1| hypothetical protein VITISV_035294 [Vitis vinifera]   834   0.0  
ref|XP_006842297.1| hypothetical protein AMTR_s00079p00107040 [A...   832   0.0  
ref|XP_003530015.2| PREDICTED: chloroplastic group IIA intron sp...   821   0.0  
ref|XP_006440978.1| hypothetical protein CICLE_v10018859mg [Citr...   817   0.0  
ref|XP_003533366.1| PREDICTED: chloroplastic group IIA intron sp...   816   0.0  
ref|XP_006485796.1| PREDICTED: chloroplastic group IIA intron sp...   814   0.0  
ref|XP_004512920.1| PREDICTED: chloroplastic group IIA intron sp...   810   0.0  
ref|XP_006440981.1| hypothetical protein CICLE_v10018859mg [Citr...   808   0.0  

>gb|EMJ12507.1| hypothetical protein PRUPE_ppa001468mg [Prunus persica]
          Length = 820

 Score =  879 bits (2270), Expect = 0.0
 Identities = 464/743 (62%), Positives = 547/743 (73%), Gaps = 29/743 (3%)
 Frame = +1

Query: 31   PSGSTNPPFRSAPWLQQWDPPESSTSQAPAKRKPKEPDVGRG------------------ 156
            PS  + PP  SAPWL  W PP +S ++ P ++  ++ +   G                  
Sbjct: 60   PSHKSKPP--SAPWLNTW-PPRNSPAELPCQKVNEKVNESHGRDQAVKANTTRYFDKNKG 116

Query: 157  -GSIERIVYRLRNLELSCEEVE-----GVDG-DSKETPLSGKERLGELLERTWSRPHTC- 312
              +IERIV RLRNL L  ++ E     G+DG DS +   SG+E+LG+LL+R W RP    
Sbjct: 117  QSAIERIVLRLRNLGLGSDDEEEDDGLGLDGQDSMQPAESGEEKLGDLLQREWVRPDYVL 176

Query: 313  ---QMVDRILLPWEREDDRGFVEEEVTKGEKRKRLRAPTLAELTIEDSXXXXXXXXXXXX 483
               +  D + LPWE+ED+    EEE  KG +++R++AP+LAELTIED             
Sbjct: 177  AEQKSNDEVALPWEKEDE--ISEEEEVKGLRKRRVKAPSLAELTIEDEELKRLRRMGMVL 234

Query: 484  XXXXTVPKAGVTQAITEKIHDAWRKSEIVRLKFHEDLVHDMKTAHELVESRTGGLVIWRS 663
                +VPKAG+TQA+ EKIHD WRK E+VRLKFHE L  DMKTAHE+VE RTGGLV+WRS
Sbjct: 235  RERISVPKAGITQAVLEKIHDTWRKEELVRLKFHEVLALDMKTAHEIVERRTGGLVLWRS 294

Query: 664  GSVMVVYRGSNYKRPSRTQLPDVQNNQTLVSNETESLFIPDVSETTTLVENVDHSVTSKP 843
            GSVMVVYRGSNYK PS++Q  D          E  +LFIPDVS   T      +  TS P
Sbjct: 295  GSVMVVYRGSNYKGPSKSQTVD---------REGGALFIPDVSSAETSATRSGNDATSGP 345

Query: 844  VTSSSFDLNLKHEKNLAEEEVEFNRLLDGLGPRFVDWWGTGILPVDADLLPQNIPGFRTP 1023
              +        H  N+ EEE EFN LLD LGPRFV+WWGTG+LPVDADLLP+ IPG++TP
Sbjct: 346  DNNEKAVKIPAHLPNMTEEEAEFNSLLDDLGPRFVEWWGTGVLPVDADLLPKTIPGYKTP 405

Query: 1024 FRLLPSGMRARLTNSEMTNLRKLAKRLPCHFALGRNRHHHGLADAILKIWEKSLVVKIAV 1203
            FRLLP+GMR+RLTN+EMTNLRKLAK LPCHFALGRNR+H GLA AI+K+WEKS V KIAV
Sbjct: 406  FRLLPTGMRSRLTNAEMTNLRKLAKSLPCHFALGRNRNHQGLASAIIKLWEKSSVAKIAV 465

Query: 1204 KRGVQNTNNKLMAEELKALIGGTLLLRNKYYIVIYRGKDFIPASVATALAEREELTKEIQ 1383
            KRG+QNTNNKLMAEELK L GG LLLRNKYYIV YRGKDF+P SVA ALAER+ELTK++Q
Sbjct: 466  KRGIQNTNNKLMAEELKTLTGGVLLLRNKYYIVFYRGKDFLPTSVAAALAERQELTKQVQ 525

Query: 1384 DAEEQLRKRTIGEPSVNAPEGDAPVGTLAEFLEAQARWGRQISTEERDAMKEEASRYKTT 1563
            D EE++R + I   S  A EG A  GTLAEF EAQARWGR+IS EER+ M EE S+ K  
Sbjct: 526  DVEEKMRIKAIDAASSGAEEGQALAGTLAEFYEAQARWGREISAEEREKMIEEDSKAKNA 585

Query: 1564 KLFKRVEHKLSIAQAKKARAEQLLTKIEASMVPVNPCEDQETITDEERSVFRRIGLRMKA 1743
            +L KR+EHKL +AQAKK RAE+LL+KIE+SM+P  P  DQET+TDEER +FRR+GLRMKA
Sbjct: 586  RLVKRIEHKLGVAQAKKLRAEKLLSKIESSMLPAGPDYDQETVTDEERVMFRRVGLRMKA 645

Query: 1744 YLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKTLAFVESTARLLEYESGGILVAIEPV 1923
            YLPLGIRGVFDGV+ENMHLHWKHRELVKLISKQKTLAFVE TARLLE+ESGGILVAIE V
Sbjct: 646  YLPLGIRGVFDGVVENMHLHWKHRELVKLISKQKTLAFVEDTARLLEFESGGILVAIERV 705

Query: 1924 PKGYALIYYRGKNYQRPISLRPRNLLTKAKALKRAIAIQRHEALSQHIVELEKNIEVMKE 2103
            PKGYALIYYRGKNYQRPI+LRPRNLLTKAKALKR++AIQRHEALSQHI ELEK IE M  
Sbjct: 706  PKGYALIYYRGKNYQRPITLRPRNLLTKAKALKRSVAIQRHEALSQHISELEKTIEQMSS 765

Query: 2104 ELGISENEEIATTGTNTMQSDDE 2172
            E+G+S  E+IA   T + +  D+
Sbjct: 766  EIGVS--EDIADESTWSSRDPDQ 786


>gb|AAT39274.1| unknown protein [Oryza sativa Japonica Group]
            gi|50878415|gb|AAT85189.1| hypothetical protein [Oryza
            sativa Japonica Group]
          Length = 798

 Score =  877 bits (2265), Expect = 0.0
 Identities = 461/716 (64%), Positives = 548/716 (76%), Gaps = 8/716 (1%)
 Frame = +1

Query: 52   PFRSAPWLQQWDPPESSTSQAPAKRKPKEPDVGRGGSIERIVYRLRNLELSCEEVEGVDG 231
            P R APWLQ+W P +      PA   P  P      SI+RIV+RLRNL L+ ++ E    
Sbjct: 60   PTRGAPWLQKWGPTD------PAAPPPPPPAPSPTSSIDRIVHRLRNLGLASDDDEPTAA 113

Query: 232  DSKET-PLSGKERLGELLERTWSRPH---TCQMVDRILLPWERED-DRGFVEEEVTKGEK 396
             +  T P  G ERL +LL+R+W+RP         D  +LPWER++  RG   EE   G K
Sbjct: 114  AATATAPPDGNERLSDLLDRSWARPDQQFAASSFDESVLPWERDEVARGRENEE--DGVK 171

Query: 397  RKRLRAPTLAELTIEDSXXXXXXXXXXXXXXXXTVPKAGVTQAITEKIHDAWRKSEIVRL 576
            R+R+RAP+LAELTIED                 TVPKAGVTQA+TEKIHDAWRKSE+VRL
Sbjct: 172  RRRVRAPSLAELTIEDEELRRLRRLGMTLRDRITVPKAGVTQAVTEKIHDAWRKSELVRL 231

Query: 577  KFHEDLVHDMKTAHELVESRTGGLVIWRSGSVMVVYRGSNYKRPSRTQLPDVQNNQTLVS 756
            KFHEDL HDMKTAHELVE RTGGL+IWRSGSVMVVYRGSNYKRP +++  D   N + V 
Sbjct: 232  KFHEDLAHDMKTAHELVERRTGGLIIWRSGSVMVVYRGSNYKRPLKSETLD--GNSSAVK 289

Query: 757  NETESLFIPDVSETTTLVENVDHSVTSKPVTSS---SFDLNLKHEKNLAEEEVEFNRLLD 927
                +LFIPD S  T      +H    K V +    +  LN+++ +++ EEE+EFN++LD
Sbjct: 290  GADGTLFIPDASSPT------EHDSQGKDVNTQREIAARLNMQNTEDMTEEELEFNQMLD 343

Query: 928  GLGPRFVDWWGTGILPVDADLLPQNIPGFRTPFRLLPSGMRARLTNSEMTNLRKLAKRLP 1107
             LGPRFVDWWGTGILPVDADLLPQ IPG++TPFRLLP+GMR  LTN+E+TNLRKLA+ LP
Sbjct: 344  ELGPRFVDWWGTGILPVDADLLPQTIPGYKTPFRLLPTGMRLTLTNAELTNLRKLARDLP 403

Query: 1108 CHFALGRNRHHHGLADAILKIWEKSLVVKIAVKRGVQNTNNKLMAEELKALIGGTLLLRN 1287
            CHFALGRNR+H GLA AI+K+WEKSLVVKIAVKRG+QNTNNKLM+EE+K L GGTLLLRN
Sbjct: 404  CHFALGRNRNHQGLAAAIVKLWEKSLVVKIAVKRGIQNTNNKLMSEEIKNLTGGTLLLRN 463

Query: 1288 KYYIVIYRGKDFIPASVATALAEREELTKEIQDAEEQLRKRTIGEPSVNAPEGDAPVGTL 1467
            KYYIVIYRGKDF+P SVA ALAEREELTK+IQ+ EEQ R   +     ++ +G A  GTL
Sbjct: 464  KYYIVIYRGKDFLPTSVAAALAEREELTKDIQNVEEQKRCIPVVHSMDDSLDGHALAGTL 523

Query: 1468 AEFLEAQARWGRQISTEERDAMKEEASRYKTTKLFKRVEHKLSIAQAKKARAEQLLTKIE 1647
            AEF EAQARWGR+++ +E++ MKE +SR    KLFKR+EHKLSIAQAK  RAE+LL+KIE
Sbjct: 524  AEFQEAQARWGREVTAKEQEEMKEASSRSVKEKLFKRLEHKLSIAQAKIHRAERLLSKIE 583

Query: 1648 ASMVPVNPCEDQETITDEERSVFRRIGLRMKAYLPLGIRGVFDGVIENMHLHWKHRELVK 1827
            ASMV  NP +D+E ITDEERSVFRRIGLR+KAYLP+GIRGVFDGVIENMHLHWKHRE+VK
Sbjct: 584  ASMVLANPSDDKEMITDEERSVFRRIGLRLKAYLPVGIRGVFDGVIENMHLHWKHREVVK 643

Query: 1828 LISKQKTLAFVESTARLLEYESGGILVAIEPVPKGYALIYYRGKNYQRPISLRPRNLLTK 2007
            LI+KQKTL FVE TARLLEYESGGILVAIE V KGYALI+YRGKNY+RPI++RPRNLLTK
Sbjct: 644  LITKQKTLPFVEETARLLEYESGGILVAIERVTKGYALIFYRGKNYRRPINIRPRNLLTK 703

Query: 2008 AKALKRAIAIQRHEALSQHIVELEKNIEVMKEELGISENEEIATTGTNTMQSDDES 2175
            AKALKRA+A+QRHEALSQHI ELE NI  MK +LGI  +EE    G+++   ++E+
Sbjct: 704  AKALKRAVAMQRHEALSQHIAELENNIRQMKLDLGIEVDEEYEEDGSDSENENNEA 759


>gb|EAY98938.1| hypothetical protein OsI_20893 [Oryza sativa Indica Group]
          Length = 801

 Score =  876 bits (2263), Expect = 0.0
 Identities = 461/716 (64%), Positives = 548/716 (76%), Gaps = 8/716 (1%)
 Frame = +1

Query: 52   PFRSAPWLQQWDPPESSTSQAPAKRKPKEPDVGRGGSIERIVYRLRNLELSCEEVEGVDG 231
            P R APWLQ+W P +      PA   P         SI+RIV+RLRNL L+ ++ E    
Sbjct: 63   PTRGAPWLQKWGPTD------PAAPPPPPLAPSPTSSIDRIVHRLRNLGLASDDDEPAAA 116

Query: 232  DSKET-PLSGKERLGELLERTWSRPH---TCQMVDRILLPWERED-DRGFVEEEVTKGEK 396
             +  T P  G ERL +LL+R+W+RP         D  +LPWER++  RG   EE   G K
Sbjct: 117  AATATAPPDGNERLSDLLDRSWARPDQQFAASSFDESVLPWERDEVARGRENEE--DGVK 174

Query: 397  RKRLRAPTLAELTIEDSXXXXXXXXXXXXXXXXTVPKAGVTQAITEKIHDAWRKSEIVRL 576
            R+R+RAP+LAELTIED                 TVPKAGVTQA+TEKIHDAWRKSE+VRL
Sbjct: 175  RRRVRAPSLAELTIEDEELRRLRRLGMTLRDRITVPKAGVTQAVTEKIHDAWRKSELVRL 234

Query: 577  KFHEDLVHDMKTAHELVESRTGGLVIWRSGSVMVVYRGSNYKRPSRTQLPDVQNNQTLVS 756
            KFHEDL HDMKTAHELVE RTGGL+IWRSGSVMVVYRGSNYKRP +++  D   N + V 
Sbjct: 235  KFHEDLAHDMKTAHELVERRTGGLIIWRSGSVMVVYRGSNYKRPLKSETLD--GNSSAVK 292

Query: 757  NETESLFIPDVSETTTLVENVDHSVTSKPVTSS---SFDLNLKHEKNLAEEEVEFNRLLD 927
                +LFIPD S  T      +H    K V +    +  LN+++ +++ EEE+EFN++LD
Sbjct: 293  GADGTLFIPDASSPT------EHDSQGKDVNTQREIAARLNMQNTEDMTEEELEFNQMLD 346

Query: 928  GLGPRFVDWWGTGILPVDADLLPQNIPGFRTPFRLLPSGMRARLTNSEMTNLRKLAKRLP 1107
             LGPRFVDWWGTGILPVDADLLPQ IPG++TPFRLLP+GMR  LTN+E+TNLRKLA+ LP
Sbjct: 347  ELGPRFVDWWGTGILPVDADLLPQTIPGYKTPFRLLPTGMRLTLTNAELTNLRKLARDLP 406

Query: 1108 CHFALGRNRHHHGLADAILKIWEKSLVVKIAVKRGVQNTNNKLMAEELKALIGGTLLLRN 1287
            CHFALGRNR+H GLA AI+K+WEKSLVVKIAVKRG+QNTNNKLM+EE+K L GGTLLLRN
Sbjct: 407  CHFALGRNRNHQGLAAAIVKLWEKSLVVKIAVKRGIQNTNNKLMSEEIKNLTGGTLLLRN 466

Query: 1288 KYYIVIYRGKDFIPASVATALAEREELTKEIQDAEEQLRKRTIGEPSVNAPEGDAPVGTL 1467
            KYYIVIYRGKDF+P SVA ALAEREELTK+IQ+ EEQ R   +     ++ +G A  GTL
Sbjct: 467  KYYIVIYRGKDFLPTSVAAALAEREELTKDIQNVEEQKRCIPVVHSMDDSLDGHALAGTL 526

Query: 1468 AEFLEAQARWGRQISTEERDAMKEEASRYKTTKLFKRVEHKLSIAQAKKARAEQLLTKIE 1647
            AEF EAQARWGR+++ +E++ MKE +SR    KLFKR+EHKLSIAQAK  RAE+LL+KIE
Sbjct: 527  AEFQEAQARWGREVTAKEQEEMKEASSRSVKEKLFKRLEHKLSIAQAKIHRAERLLSKIE 586

Query: 1648 ASMVPVNPCEDQETITDEERSVFRRIGLRMKAYLPLGIRGVFDGVIENMHLHWKHRELVK 1827
            ASMV  NP +D+E ITDEERSVFRRIGLR+KAYLP+GIRGVFDGVIENMHLHWKHRE+VK
Sbjct: 587  ASMVLANPSDDKEMITDEERSVFRRIGLRLKAYLPVGIRGVFDGVIENMHLHWKHREVVK 646

Query: 1828 LISKQKTLAFVESTARLLEYESGGILVAIEPVPKGYALIYYRGKNYQRPISLRPRNLLTK 2007
            LI+KQKTL FVE TARLLEYESGGILVAIE VPKGYALI+YRGKNY+RPI++RPRNLLTK
Sbjct: 647  LITKQKTLPFVEETARLLEYESGGILVAIERVPKGYALIFYRGKNYRRPINIRPRNLLTK 706

Query: 2008 AKALKRAIAIQRHEALSQHIVELEKNIEVMKEELGISENEEIATTGTNTMQSDDES 2175
            AKALKRA+A+QRHEALSQHI ELE NI  MK +LGI  +EE    G+++   ++E+
Sbjct: 707  AKALKRAVAMQRHEALSQHIAELENNIRQMKLDLGIEVDEEYEEDGSDSENENNEA 762


>ref|XP_004963613.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Setaria italica]
          Length = 774

 Score =  870 bits (2247), Expect = 0.0
 Identities = 453/726 (62%), Positives = 553/726 (76%), Gaps = 16/726 (2%)
 Frame = +1

Query: 52   PFRSAPWLQQWDPPESSTSQAPAKRKPKEPDVGRGGSIERIVYRLRNLELSCEEVEGVDG 231
            P   APWLQ+W P + S    PA      P      SI+RIV+RLRNL L+ ++ +    
Sbjct: 40   PSTGAPWLQKWAPSDPSQ---PAPAPAPSPTT----SIDRIVHRLRNLGLASDDDDPSAA 92

Query: 232  DSKET-PLSGKERLGELLERTWSRPH---TCQMVDRILLPWEREDDRGFVEEEVTKGEKR 399
             +  T P  G ERLG+LL+R+W+RP         D  +LPWER+D+      +   G KR
Sbjct: 93   TATATAPPDGTERLGDLLDRSWARPDRQFAAASFDDAVLPWERDDEAAAGGRDEEDGAKR 152

Query: 400  KRLRAPTLAELTIEDSXXXXXXXXXXXXXXXXTVPKAGVTQAITEKIHDAWRKSEIVRLK 579
            +R++APTLAELTIED                 TVPKAGVT AITEKIHDAWRKSE+VRLK
Sbjct: 153  RRVKAPTLAELTIEDEELRRLRRLGMTLRDRITVPKAGVTTAITEKIHDAWRKSELVRLK 212

Query: 580  FHEDLVHDMKTAHELVESRTGGLVIWRSGSVMVVYRGSNYKRPSRTQLPDVQNNQTLVSN 759
            FHEDL HDMKTAHELVE RTGGL+IWRSGSVMVVYRGSNYKRP ++Q  +  ++Q  V  
Sbjct: 213  FHEDLAHDMKTAHELVERRTGGLIIWRSGSVMVVYRGSNYKRPLKSQTLNGASSQ--VKG 270

Query: 760  ETESLFIPDVSETTTLVENVDHSVTSKPVTSSSFDLNLKHEKNLAEEEVEFNRLLDGLGP 939
            E  +LFIPD S      EN           +++  LN+++ +++ EEE+EFN++LD LGP
Sbjct: 271  EDGALFIPDASSPA---ENDSQGKDLAAQHANASQLNMQNTEDMTEEELEFNQMLDELGP 327

Query: 940  RFVDWWGTGILPVDADLLPQNIPGFRTPFRLLPSGMRARLTNSEMTNLRKLAKRLPCHFA 1119
            RFVDWWGTGILPVDADLLPQ IP ++TP+R+LP+GMR+ LTN+E+TNLRKLA+ LPCHFA
Sbjct: 328  RFVDWWGTGILPVDADLLPQTIPEYKTPYRVLPTGMRSTLTNAELTNLRKLARNLPCHFA 387

Query: 1120 LGRNRHHHGLADAILKIWEKSLVVKIAVKRGVQNTNNKLMAEELKALIGGTLLLRNKYYI 1299
            LGRNR+H GLA AI+K+WEKSLVVKIAVKRG+QNTNNKLMAEE+K L GGTLLLRNK+YI
Sbjct: 388  LGRNRNHQGLAAAIVKLWEKSLVVKIAVKRGIQNTNNKLMAEEIKNLTGGTLLLRNKFYI 447

Query: 1300 VIYRGKDFIPASVATALAEREELTKEIQDAEEQLRKRTIGEPSVNAPEGDAPVGTLAEFL 1479
            VIYRGKDF+P SVA  LAEREELTK+IQ+ EEQ R  +IG+P  +  +G A  GTLAEF 
Sbjct: 448  VIYRGKDFLPTSVAAVLAEREELTKDIQNMEEQRRNVSIGQPPDDGLDGHALAGTLAEFQ 507

Query: 1480 EAQARWGRQISTEERDAMKEEASRYKTTKLFKRVEHKLSIAQAKKARAEQLLTKIEASMV 1659
            EAQARWGR+++ +E++ MKE +SR +  KL++++EHKLS+AQAK  RAE+LL+KIEASMV
Sbjct: 508  EAQARWGREVTAKEQEEMKEASSRSEKQKLYRKLEHKLSVAQAKIHRAERLLSKIEASMV 567

Query: 1660 PVNPCEDQETITDEERSVFRRIGLRMKAYLPLGIRGVFDGVIENMHLHWKHRELVKLISK 1839
              +PC+D+E ITDEE+SVFRRIGLR+K+YLPLG+RGVFDGVIENMHLHWKHRE+VKLISK
Sbjct: 568  LADPCDDREMITDEEKSVFRRIGLRLKSYLPLGVRGVFDGVIENMHLHWKHREVVKLISK 627

Query: 1840 QKTLAFVESTARLLEYESGGILVAIEPVPKGYALIYYRGKNYQRPISLRPRNLLTKAKAL 2019
            QKTL+FV+ TARLLEYESGGILVAIE VPKGYALI+YRGKNY+RPI++RPRNLLTKAKAL
Sbjct: 628  QKTLSFVQETARLLEYESGGILVAIERVPKGYALIFYRGKNYRRPINIRPRNLLTKAKAL 687

Query: 2020 KRAIAIQRHEALSQHIVELEKNIEVMKEELGI------------SENEEIATTGTNTMQS 2163
            KRA+A+QRHEALSQHI +LE NI+ MK +LGI            SENE+  T  T+    
Sbjct: 688  KRAVAMQRHEALSQHIDQLENNIKQMKLDLGIEYYEEQEDDSSDSENED-GTAVTSASYD 746

Query: 2164 DDESSF 2181
            +D+  F
Sbjct: 747  EDQDDF 752


>gb|EOY21034.1| CRS1 / YhbY domain-containing protein [Theobroma cacao]
          Length = 919

 Score =  869 bits (2246), Expect = 0.0
 Identities = 466/747 (62%), Positives = 553/747 (74%), Gaps = 24/747 (3%)
 Frame = +1

Query: 13   DEDGRLPSGSTNPPFRSAPWLQQWDPPESSTSQAPAKRKPK------EPDVGRGGSIERI 174
            D++  +P  S+     S+  LQ W  P     Q+    K        + D  +  +IERI
Sbjct: 134  DQEASVPPNSS----ASSSSLQAWSSPSQKVIQSDGDDKTDVETRYFDRDKSQS-AIERI 188

Query: 175  VYRLRNLEL-SCEEVEGVDGDSK--ETPLSGKERLGELLERTWSRPHTCQMVDR----IL 333
            V RLRNL L S +E EG D   +   TP++G+ERLG+LL+R W RP T  +++R     +
Sbjct: 189  VLRLRNLGLGSDDEDEGEDETDQYNSTPVTGEERLGDLLKREWVRPDT-MLIEREKEEAV 247

Query: 334  LPWEREDDRGFVEEEVTKGEKRKRLRAPTLAELTIEDSXXXXXXXXXXXXXXXXTVPKAG 513
            LPWER++    V +E   G K++R+RAPTLAELTIED                  VPKAG
Sbjct: 248  LPWERDEAEVEVVKEGVLGVKKRRVRAPTLAELTIEDEELRRLRRMGMYLRERINVPKAG 307

Query: 514  VTQAITEKIHDAWRKSEIVRLKFHEDLVHDMKTAHELVESRTGGLVIWRSGSVMVVYRGS 693
            +TQA+ EKIHD WRK E+VRLKFHE L  DMKTAHE+VE RTGGLV+WRSGSVMVVYRGS
Sbjct: 308  ITQAVLEKIHDKWRKEELVRLKFHEVLATDMKTAHEIVERRTGGLVLWRSGSVMVVYRGS 367

Query: 694  NYKRPSRTQLPDVQNNQTLVSNETESLFIPDVSETTTLVENVDHSVTSKPVTSSSFDLNL 873
            NY+ PSR+Q  D          E E+LFIPDVS  +  V   +   TS P       +  
Sbjct: 368  NYEGPSRSQSID---------REGEALFIPDVSSASNAVRGSETGKTSTPEKCEPVVVKP 418

Query: 874  KHEKNLAEEEVEFNRLLDGLGPRFVDWWGTGILPVDADLLPQNIPGFRTPFRLLPSGMRA 1053
            +  +++ EEE E+N LLDG+GPRFV+WWGTG+LPVDADLLPQ IPG++TPFRLLP+GMR 
Sbjct: 419  ERSESMTEEEAEYNSLLDGVGPRFVEWWGTGVLPVDADLLPQKIPGYKTPFRLLPAGMRP 478

Query: 1054 RLTNSEMTNLRKLAKRLPCHFALGRNRHHHGLADAILKIWEKSLVVKIAVKRGVQNTNNK 1233
            RLTN+EMTNLRKLAK LPCHFALGRNR+H GLA AI+K+WEKSLVVKIAVKRG+QNTNNK
Sbjct: 479  RLTNAEMTNLRKLAKSLPCHFALGRNRNHQGLAAAIIKLWEKSLVVKIAVKRGIQNTNNK 538

Query: 1234 LMAEELKALIGGTLLLRNKYYIVIYRGKDFIPASVATALAEREELTKEIQDAEEQLRKRT 1413
            LMAEELK L GG LLLRNKY+IVIYRGKDF+P SVA ALAER+ELTK+IQD EE++R R 
Sbjct: 539  LMAEELKNLTGGVLLLRNKYFIVIYRGKDFLPTSVAAALAERQELTKQIQDVEEKVRIRA 598

Query: 1414 IGEPSVNAPEGDAPVGTLAEFLEAQARWGRQISTEERDAMKEEASRYKTTKLFKRVEHKL 1593
            +        +G+AP GTLAEF EAQA WGR+IS EER+ M EEAS+ K  +L KRVEHKL
Sbjct: 599  VEPAQSGEDKGEAPAGTLAEFYEAQACWGREISAEEREKMIEEASKAKHARLVKRVEHKL 658

Query: 1594 SIAQAKKARAEQLLTKIEASMVPVNPCEDQETITDEERSVFRRIGLRMKAYLPLGIRGVF 1773
            ++AQAKK RAE+LL KIE+SM+P  P  DQETITDEER +FRR+GLRMK YLPLGIRGVF
Sbjct: 659  AVAQAKKLRAERLLAKIESSMIPAAPDYDQETITDEERVMFRRVGLRMKPYLPLGIRGVF 718

Query: 1774 DGVIENMHLHWKHRELVKLISKQKTLAFVESTARLLEYESGGILVAIEPVPKGYALIYYR 1953
            DGVIENMHLHWKHRELVKLISKQKTLAFVE TARLLE+ESGGILVAIE VPKGYALIYYR
Sbjct: 719  DGVIENMHLHWKHRELVKLISKQKTLAFVEDTARLLEFESGGILVAIERVPKGYALIYYR 778

Query: 1954 GKNYQRPISLRPRNLLTKAKALKRAIAIQRHEALSQHIVELEKNIEVMKEELGIS---EN 2124
            GKNY RPISLRPRNLLTKAKALKR++A+QRHEALSQHI ELE+ IE MK+E+G S   E+
Sbjct: 779  GKNYHRPISLRPRNLLTKAKALKRSVAMQRHEALSQHISELERTIEEMKKEIGASQDVED 838

Query: 2125 EEIATTG--------TNTMQSDDESSF 2181
            E+   +G        +   QS+DE+S+
Sbjct: 839  EDSQVSGEHGQFDPVSELTQSEDEASY 865


>ref|XP_003565949.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Brachypodium distachyon]
          Length = 782

 Score =  862 bits (2227), Expect = 0.0
 Identities = 445/712 (62%), Positives = 550/712 (77%), Gaps = 3/712 (0%)
 Frame = +1

Query: 52   PFRSAPWLQQWDPPESSTSQAPAKRKPKEPDVGRGGSIERIVYRLRNLELSCEEVEGVDG 231
            P R APW+Q+W P + S +  PA      P      SI+RIV+RLRNL L  ++ E    
Sbjct: 57   PSRGAPWMQKWAPADPS-APPPAPSPGPTPTT----SIDRIVHRLRNLGLGTDDDEP--- 108

Query: 232  DSKETPLSGKERLGELLERTWSRPH---TCQMVDRILLPWEREDDRGFVEEEVTKGEKRK 402
             +  TPL+GKERLG+LL+R+W+RP         D+ +LPWER+ D     +E   G KRK
Sbjct: 109  SAAATPLNGKERLGDLLDRSWARPDRHFAASSFDQAVLPWERDQDTDGGMDEEEGGAKRK 168

Query: 403  RLRAPTLAELTIEDSXXXXXXXXXXXXXXXXTVPKAGVTQAITEKIHDAWRKSEIVRLKF 582
            R++AP+LAELT++D+                TVPKAGVTQA+TEKIHDAWRKSE+VRLKF
Sbjct: 169  RVKAPSLAELTMDDAELRRLRGMGMTLRDRITVPKAGVTQAVTEKIHDAWRKSELVRLKF 228

Query: 583  HEDLVHDMKTAHELVESRTGGLVIWRSGSVMVVYRGSNYKRPSRTQLPDVQNNQTLVSNE 762
            HEDL +DMKTAHELVE RTGGL+IWR+GSVMVVYRG+NY RP+++Q  D     +    E
Sbjct: 229  HEDLANDMKTAHELVERRTGGLIIWRAGSVMVVYRGNNYTRPTKSQTLD--GTSSTRKGE 286

Query: 763  TESLFIPDVSETTTLVENVDHSVTSKPVTSSSFDLNLKHEKNLAEEEVEFNRLLDGLGPR 942
              +LFIPD S      +N    +T++    S   LN+ +  ++ EEE+EFN++LD LGPR
Sbjct: 287  DNTLFIPDASSPAEN-DNQGKDLTAQHDNLSR--LNIHNTDDMTEEELEFNQMLDELGPR 343

Query: 943  FVDWWGTGILPVDADLLPQNIPGFRTPFRLLPSGMRARLTNSEMTNLRKLAKRLPCHFAL 1122
            FVDWWGTGILPVDADLLPQ IPG++ PFRLLP+GMR  LTN+E+TNLRKLA+ LPCHFAL
Sbjct: 344  FVDWWGTGILPVDADLLPQTIPGYKAPFRLLPTGMRTSLTNAELTNLRKLARSLPCHFAL 403

Query: 1123 GRNRHHHGLADAILKIWEKSLVVKIAVKRGVQNTNNKLMAEELKALIGGTLLLRNKYYIV 1302
            GRNR+H GLA AI+K+WEKSLVVKIAVKRG+QNTNN+LM++E+K L GGTLLLRNKY+IV
Sbjct: 404  GRNRNHQGLASAIIKLWEKSLVVKIAVKRGIQNTNNELMSDEIKKLTGGTLLLRNKYFIV 463

Query: 1303 IYRGKDFIPASVATALAEREELTKEIQDAEEQLRKRTIGEPSVNAPEGDAPVGTLAEFLE 1482
            IYRGKDF+P SVA ALAEREELTK+IQ+ EEQ R   I     +  +G A VGTLAEF E
Sbjct: 464  IYRGKDFLPQSVAVALAEREELTKDIQNVEEQRRCTPIAHSPEDGFDGHALVGTLAEFQE 523

Query: 1483 AQARWGRQISTEERDAMKEEASRYKTTKLFKRVEHKLSIAQAKKARAEQLLTKIEASMVP 1662
            AQARWGR ++++E++ MKE +SR +  K+F+R+EHKLSIAQAK  RA +LL+KIEASM+ 
Sbjct: 524  AQARWGRDVTSKEQEEMKEASSRLEKEKIFRRLEHKLSIAQAKIHRAGKLLSKIEASMIL 583

Query: 1663 VNPCEDQETITDEERSVFRRIGLRMKAYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQ 1842
             NP +D+E ITDEERSVFRRIGL+MKAYLP+GIRGVFDGVIENMHLHWKHRE+VKLI+KQ
Sbjct: 584  ANPSDDREMITDEERSVFRRIGLKMKAYLPVGIRGVFDGVIENMHLHWKHREVVKLITKQ 643

Query: 1843 KTLAFVESTARLLEYESGGILVAIEPVPKGYALIYYRGKNYQRPISLRPRNLLTKAKALK 2022
            KTLAFV  TARLLEYESGGILVA+E VPKGYALI+YRGKNY+RPI++RPRNLLTKAKALK
Sbjct: 644  KTLAFVNETARLLEYESGGILVAVERVPKGYALIFYRGKNYRRPINIRPRNLLTKAKALK 703

Query: 2023 RAIAIQRHEALSQHIVELEKNIEVMKEELGISENEEIATTGTNTMQSDDESS 2178
            RA+A+QRHEALSQHI +LE N++ MK +LG+ + +E     ++  +SDD ++
Sbjct: 704  RAVAMQRHEALSQHIAQLESNMKQMKFDLGMEDYDE-EDEDSSDSESDDNTA 754


>ref|XP_004300521.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 820

 Score =  854 bits (2207), Expect = 0.0
 Identities = 458/746 (61%), Positives = 542/746 (72%), Gaps = 29/746 (3%)
 Frame = +1

Query: 31   PSGSTNPPFRSAPWLQQW--------DPP---------ESSTSQAPAKRKPKEPDVGRGG 159
            PS S++    +APWL +W        +PP         ES   + P+    +  D  +G 
Sbjct: 61   PSSSSS----TAPWLNKWPSRGQAPAEPPRQKFSDRVKESDGREKPSSNAARYVDKDKGQ 116

Query: 160  S-IERIVYRLRNLELSCEEVEGVDGDSKETP----LSGKERLGELLERTWSRPHTCQMVD 324
            S IERIV+RLRNL L  +E E   GD  E       SG E+LG+LL+R W RP      +
Sbjct: 117  SAIERIVFRLRNLGLGDDEEEEESGDGVELDSMPAASGAEKLGDLLQREWVRPDYILAEE 176

Query: 325  R----ILLPWEREDDRGFVEEEVTKGEKRKRLRAPTLAELTIEDSXXXXXXXXXXXXXXX 492
            +    + LPWE+E++    +EEV    K +R +AP+LAELTIED                
Sbjct: 177  KGDDDVALPWEKEEEELSEDEEVKGMRKARRSKAPSLAELTIEDEELRRLRRLGMVLRER 236

Query: 493  XTVPKAGVTQAITEKIHDAWRKSEIVRLKFHEDLVHDMKTAHELVESRTGGLVIWRSGSV 672
             +VPKAG+TQA+ EKIHD WRK E+VRLKFHE L HDMKTAHE+VE RTGGLV+WRSGSV
Sbjct: 237  ISVPKAGITQAVLEKIHDKWRKEELVRLKFHEVLAHDMKTAHEIVERRTGGLVLWRSGSV 296

Query: 673  MVVYRGSNYKRPSRTQLPDVQNNQTLVSNETESLFIPDVSETTTLVENVDHSVTSKP-VT 849
            MVVYRGSNYK PS+++               ++LFIPDVS   T V    +  TS P  T
Sbjct: 297  MVVYRGSNYKGPSKSEP---------AGRGGDALFIPDVSSAETSVTRGGNDATSAPDKT 347

Query: 850  SSSFDLNLKHEKNLAEEEVEFNRLLDGLGPRFVDWWGTGILPVDADLLPQNIPGFRTPFR 1029
              +  +     K + +EE EFN LLD LGPRFV++WGTGILPVDADLLP+ IPG++TPFR
Sbjct: 348  EQAVKIPEPLPKKMTDEEAEFNSLLDELGPRFVEYWGTGILPVDADLLPKTIPGYKTPFR 407

Query: 1030 LLPSGMRARLTNSEMTNLRKLAKRLPCHFALGRNRHHHGLADAILKIWEKSLVVKIAVKR 1209
            LLP+GMR+RLTN+EMTNLRKLAK +PCHFALGRNR+H GLA AILK+WEKS V KIAVKR
Sbjct: 408  LLPTGMRSRLTNAEMTNLRKLAKSIPCHFALGRNRNHQGLASAILKVWEKSSVAKIAVKR 467

Query: 1210 GVQNTNNKLMAEELKALIGGTLLLRNKYYIVIYRGKDFIPASVATALAEREELTKEIQDA 1389
            G+QNTNNK+MAEELKAL GG LLLRNKYYIVIYRGKDF+P +VATALAER+ELTK++QD 
Sbjct: 468  GIQNTNNKIMAEELKALTGGVLLLRNKYYIVIYRGKDFVPTTVATALAERQELTKQVQDV 527

Query: 1390 EEQLRKRTIGEPSVNAPEGDAPVGTLAEFLEAQARWGRQISTEERDAMKEEASRYKTTKL 1569
            EE +R + I   + +  EG A  GTLAEF EAQARWGR+IS EER  M EE S+ K  + 
Sbjct: 528  EEIVRIKPIDAAASSTEEGQALAGTLAEFYEAQARWGREISAEERKKMIEEDSKAKMARR 587

Query: 1570 FKRVEHKLSIAQAKKARAEQLLTKIEASMVPVNPCEDQETITDEERSVFRRIGLRMKAYL 1749
             KR+EHKL +AQAKK RAE LL KIE++M+P  P  DQETITDEER +FRR+GLRMKAYL
Sbjct: 588  AKRIEHKLGVAQAKKLRAESLLNKIESAMLPAGPDYDQETITDEERVMFRRVGLRMKAYL 647

Query: 1750 PLGIRGVFDGVIENMHLHWKHRELVKLISKQKTLAFVESTARLLEYESGGILVAIEPVPK 1929
            PLGIRGVFDGVIENMHLHWKHRELVKLISKQKTLAFVE +ARLLEYESGGILVAIE VPK
Sbjct: 648  PLGIRGVFDGVIENMHLHWKHRELVKLISKQKTLAFVEDSARLLEYESGGILVAIERVPK 707

Query: 1930 GYALIYYRGKNYQRPISLRPRNLLTKAKALKRAIAIQRHEALSQHIVELEKNIEVMKEEL 2109
            GYALIYYRGKNYQRPI+LRPRNLLTKAKALKR++A+QRHEALSQHI ELE+ IE M+ E+
Sbjct: 708  GYALIYYRGKNYQRPITLRPRNLLTKAKALKRSVAMQRHEALSQHIEELERTIEQMRSEI 767

Query: 2110 GISENEEIATT--GTNTMQSDDESSF 2181
            GISE+ +   T    +  QS  +S F
Sbjct: 768  GISEDVDNERTWGSRDPHQSGHDSEF 793


>dbj|BAK03116.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 775

 Score =  852 bits (2202), Expect = 0.0
 Identities = 452/714 (63%), Positives = 547/714 (76%), Gaps = 3/714 (0%)
 Frame = +1

Query: 49   PPFRSAPWLQQWDPPESSTSQAPAKRKPKEPDVGRGGSIERIVYRLRNLELSCEEVEGVD 228
            P    APW+Q+W P + S + APA      P      SI+RIV+RLRNL L  ++ E   
Sbjct: 54   PSRGGAPWMQKWAPADPS-APAPAPSPGHAPST----SIDRIVHRLRNLGLGTDDDEPSS 108

Query: 229  GDSKETPLSGKERLGELLERTWSRPH---TCQMVDRILLPWEREDDRGFVEEEVTKGEKR 399
              +   PL G+ERLG+LL+R+W+RP        +D  +LPWER  DR    EEV  G KR
Sbjct: 109  A-AVSAPLDGRERLGDLLDRSWARPDRQFAASGLDEAVLPWER--DRESDGEEVD-GVKR 164

Query: 400  KRLRAPTLAELTIEDSXXXXXXXXXXXXXXXXTVPKAGVTQAITEKIHDAWRKSEIVRLK 579
            KR+RAP+LAELT++D                 TVPKAGVTQAITEKIHDAWRKSE+VRLK
Sbjct: 165  KRVRAPSLAELTMDDVELRRLRGMGMTLKDRITVPKAGVTQAITEKIHDAWRKSELVRLK 224

Query: 580  FHEDLVHDMKTAHELVESRTGGLVIWRSGSVMVVYRGSNYKRPSRTQLPDVQNNQTLVSN 759
            FHED  +DMKTAHELVE RTGGL+IWR+GSVMVVYRGSNY RP ++Q  D  ++      
Sbjct: 225  FHEDHANDMKTAHELVERRTGGLIIWRAGSVMVVYRGSNYTRPLKSQTLDGTSSPR--KQ 282

Query: 760  ETESLFIPDVSETTTLVENVDHSVTSKPVTSSSFDLNLKHEKNLAEEEVEFNRLLDGLGP 939
            E  +LFIP+ S T   VEN +          ++  L+L + +++ EEE+EFN++LD LGP
Sbjct: 283  EDSALFIPNGSST---VENDNQGKDLAAQHDNAPILDLHNTEDMTEEELEFNQMLDELGP 339

Query: 940  RFVDWWGTGILPVDADLLPQNIPGFRTPFRLLPSGMRARLTNSEMTNLRKLAKRLPCHFA 1119
            RFVDWWGTGILPVDADLLPQ IPG++ PFR+LP+GMR  LTNSE+TNLRKLA+ LPCHFA
Sbjct: 340  RFVDWWGTGILPVDADLLPQTIPGYKAPFRVLPTGMRTSLTNSELTNLRKLARNLPCHFA 399

Query: 1120 LGRNRHHHGLADAILKIWEKSLVVKIAVKRGVQNTNNKLMAEELKALIGGTLLLRNKYYI 1299
            LGRNR+H GLA AI+K+WEKSLVVKIAVKRG+QNTNNKLM++E+K L GGTLLLRNKYYI
Sbjct: 400  LGRNRNHQGLAAAIVKLWEKSLVVKIAVKRGIQNTNNKLMSDEIKNLTGGTLLLRNKYYI 459

Query: 1300 VIYRGKDFIPASVATALAEREELTKEIQDAEEQLRKRTIGEPSVNAPEGDAPVGTLAEFL 1479
            VIYRGKDF+P SVA ALAEREELTK+IQ+ EEQ R  +I     +  EG A VGTLAEF 
Sbjct: 460  VIYRGKDFLPTSVAAALAEREELTKDIQNLEEQRRSISIEHSPEDGFEGHALVGTLAEFQ 519

Query: 1480 EAQARWGRQISTEERDAMKEEASRYKTTKLFKRVEHKLSIAQAKKARAEQLLTKIEASMV 1659
            EAQARWGR ++++E+  MKE + R +  KLF+R+EHKLSIAQAK  RA +LL+KIEASMV
Sbjct: 520  EAQARWGRNVTSKEQQEMKEASFRSEKEKLFRRLEHKLSIAQAKIHRAGKLLSKIEASMV 579

Query: 1660 PVNPCEDQETITDEERSVFRRIGLRMKAYLPLGIRGVFDGVIENMHLHWKHRELVKLISK 1839
              NP +D+E IT EERSVFRRIGL+MKAYLP+GIRGVFDGVIENMHLHWKHRE+VKLI+K
Sbjct: 580  LANPSDDREMITAEERSVFRRIGLKMKAYLPVGIRGVFDGVIENMHLHWKHREVVKLITK 639

Query: 1840 QKTLAFVESTARLLEYESGGILVAIEPVPKGYALIYYRGKNYQRPISLRPRNLLTKAKAL 2019
            QKTLAFVE TARLLEYESGGILVAIE VPKG+ALI+YRGKNY+RPI++RPRNLLTKAKAL
Sbjct: 640  QKTLAFVEETARLLEYESGGILVAIERVPKGHALIFYRGKNYRRPINIRPRNLLTKAKAL 699

Query: 2020 KRAIAIQRHEALSQHIVELEKNIEVMKEELGISENEEIATTGTNTMQSDDESSF 2181
            KRA+A+QRHEALSQHI +LE N++ MK +LG+ + +E    G+++   DD + +
Sbjct: 700  KRAVAMQRHEALSQHIDQLEINMKQMKRDLGMEDYDEEGGDGSDSESEDDTAGY 753


>ref|XP_006655563.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Oryza brachyantha]
          Length = 760

 Score =  841 bits (2173), Expect = 0.0
 Identities = 447/720 (62%), Positives = 530/720 (73%), Gaps = 8/720 (1%)
 Frame = +1

Query: 34   SGSTNPPF--RSAPWLQQWDPPESSTSQAPAKRKPKEPDVGRGGSIERIVYRLRNLELSC 207
            SG   PP   RSAPWLQ  D  E +T+ A A   P                         
Sbjct: 52   SGGRAPPAPSRSAPWLQN-DDDEPATATATATAPP------------------------- 85

Query: 208  EEVEGVDGDSKETPLSGKERLGELLERTWSRPH---TCQMVDRILLPWEREDDRGFVEEE 378
                            G ERL +LL+R+WSRP         D  +LPWER++      EE
Sbjct: 86   ---------------DGNERLSDLLDRSWSRPDQQFAATSFDESVLPWERDESARSRGEE 130

Query: 379  VTKGEKRKRLRAPTLAELTIEDSXXXXXXXXXXXXXXXXTVPKAGVTQAITEKIHDAWRK 558
               G KRKR+RAP+LAELTIED                 TVPKAGVTQA+TEKIHDAWRK
Sbjct: 131  -DDGVKRKRVRAPSLAELTIEDEELRRLRRMGMTLRDRITVPKAGVTQAVTEKIHDAWRK 189

Query: 559  SEIVRLKFHEDLVHDMKTAHELVESRTGGLVIWRSGSVMVVYRGSNYKRPSRTQLPDVQN 738
            SE+VRLKFHEDL HDMKTAHELVE RTGGL+IWRSGSVMVVYRGSNYKRP +++  D   
Sbjct: 190  SELVRLKFHEDLAHDMKTAHELVERRTGGLIIWRSGSVMVVYRGSNYKRPLKSEALD--G 247

Query: 739  NQTLVSNETESLFIPDVSETTTLVENVDHSVTSKPVTSS---SFDLNLKHEKNLAEEEVE 909
              + V  E  +LFIPD S        ++H    K + +    +  LN+++ +++ E+E+E
Sbjct: 248  TSSAVKGEDGTLFIPDASSP------IEHGNQGKDLNTQREIAARLNMQNAEDMTEDELE 301

Query: 910  FNRLLDGLGPRFVDWWGTGILPVDADLLPQNIPGFRTPFRLLPSGMRARLTNSEMTNLRK 1089
            FN++LD LGPRFVDWWGTGILPVDADLLPQ IPG++TPFRLLP+GMR  LTN+E+TNLRK
Sbjct: 302  FNQMLDELGPRFVDWWGTGILPVDADLLPQTIPGYKTPFRLLPTGMRLTLTNAELTNLRK 361

Query: 1090 LAKRLPCHFALGRNRHHHGLADAILKIWEKSLVVKIAVKRGVQNTNNKLMAEELKALIGG 1269
            LA+ LPCHFALGRNR+H GLA AI+K+WEKSLVVKIAVKRG+QNTNNKLMAEE+K L GG
Sbjct: 362  LARDLPCHFALGRNRNHQGLAAAIVKLWEKSLVVKIAVKRGIQNTNNKLMAEEIKNLTGG 421

Query: 1270 TLLLRNKYYIVIYRGKDFIPASVATALAEREELTKEIQDAEEQLRKRTIGEPSVNAPEGD 1449
            TLLLRNKYYIVIYRGKDF+P SVA ALAEREELTK+IQ+ EEQ R+ +I   + ++ +G 
Sbjct: 422  TLLLRNKYYIVIYRGKDFLPTSVAAALAEREELTKDIQNVEEQRRRISIEHSTDDSLDGH 481

Query: 1450 APVGTLAEFLEAQARWGRQISTEERDAMKEEASRYKTTKLFKRVEHKLSIAQAKKARAEQ 1629
            A  GTLAEF EAQARWGR+++ +E++ MKE +SR    K FKR+EHKLSIAQAK  RAE+
Sbjct: 482  ALAGTLAEFQEAQARWGREVTVKEQEEMKEASSRSVKEKAFKRLEHKLSIAQAKIHRAER 541

Query: 1630 LLTKIEASMVPVNPCEDQETITDEERSVFRRIGLRMKAYLPLGIRGVFDGVIENMHLHWK 1809
            LL+KIEASMV  NP +DQE ITDEERSVFRRIGLR+KAYLP+GIRGVFDGVIENMHLHWK
Sbjct: 542  LLSKIEASMVLANPSDDQEMITDEERSVFRRIGLRLKAYLPVGIRGVFDGVIENMHLHWK 601

Query: 1810 HRELVKLISKQKTLAFVESTARLLEYESGGILVAIEPVPKGYALIYYRGKNYQRPISLRP 1989
            HRE+VKLI+KQKTL FVE TARLL+YESGGILVAIE VPKGYALI+YRGKNY+RPI++RP
Sbjct: 602  HREVVKLITKQKTLPFVEETARLLQYESGGILVAIERVPKGYALIFYRGKNYRRPINIRP 661

Query: 1990 RNLLTKAKALKRAIAIQRHEALSQHIVELEKNIEVMKEELGISENEEIATTGTNTMQSDD 2169
            RNLLTKAKALKRA+A+QRHEALS+HI +LE NI  MK +LGI  +EE     +++   D+
Sbjct: 662  RNLLTKAKALKRAVAMQRHEALSEHIAQLESNIREMKLDLGIENDEEYEEDNSDSENEDN 721


>gb|EXB56911.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Morus
            notabilis]
          Length = 838

 Score =  838 bits (2165), Expect = 0.0
 Identities = 453/763 (59%), Positives = 550/763 (72%), Gaps = 36/763 (4%)
 Frame = +1

Query: 1    WEDNDEDGRLPSGSTN----PPFRSAPWLQQWDPPESS---TSQAPAKRKPKEPDV---- 147
            W+D +      S S++    PP  SAPWL +W P ESS    +++  + +   PD     
Sbjct: 59   WKDQNPKPSSSSSSSSHRHKPP--SAPWLNKWPPVESSDRKVAESTDRDRTDRPDTVGYV 116

Query: 148  --GRG-GSIERIVYRLRNLELSCEEVE--------GVDGDSKETPLSGKERLGELLERTW 294
               RG  +IERIV RLRNL L  ++ +        G+DG     P++G+E+LG+LL R W
Sbjct: 117  DRDRGRNAIERIVLRLRNLGLGSDDEDEDDKEGDIGLDGQDA-MPVTGEEKLGDLLRREW 175

Query: 295  SRPHTC----QMVDRILLPWEREDDRGFVEEEVTKGEKRKRLRAPTLAELTIEDSXXXXX 462
             RP       +  D + LPWERE++   V+E  T+  +++R+ APTLAELTIED      
Sbjct: 176  IRPDFVLEEEESKDDLTLPWEREEEEKGVDEG-TRELRKRRVNAPTLAELTIEDEELRRL 234

Query: 463  XXXXXXXXXXXTVPKAGVTQAITEKIHDAWRKSEIVRLKFHEDLVHDMKTAHELVESRTG 642
                       +VPKAG+TQA+ EKIHD WRK E+VRLKFHE L HDMKTAHE+VE RTG
Sbjct: 235  RRMGMFLRDRISVPKAGLTQAVLEKIHDKWRKEELVRLKFHEVLAHDMKTAHEIVERRTG 294

Query: 643  GLVIWRSGSVMVVYRGSNYKRPSRTQLPDVQNNQTLVSNETESLFIPDVSETTTLVENVD 822
            GLV WRSGSVMVVYRGSNY+ P +TQ          V+ E ++LFIPDVS     +    
Sbjct: 295  GLVTWRSGSVMVVYRGSNYEGPPKTQP---------VNKERDALFIPDVSSAENFLTRSG 345

Query: 823  HSVTSKPVTSSSFDLNLKHEKNLAEEEVEFNRLLDGLGPRFVDWWGTGILPVDADLLPQN 1002
             S+TS    S +   N    +N+ EEE EFN LLD LGPRF +WWGTG++PVDADLLP  
Sbjct: 346  DSLTSNAEKSETPVRNPVSVQNMTEEEAEFNSLLDDLGPRFDEWWGTGVIPVDADLLPPK 405

Query: 1003 IPGFRTPFRLLPSGMRARLTNSEMTNLRKLAKRLPCHFALGRNRHHHGLADAILKIWEKS 1182
            IPG++TPFRLLP+GMR+RLTN EMTNLRK+AK LP HFALGRNR+H GLA AI+K+WEKS
Sbjct: 406  IPGYKTPFRLLPTGMRSRLTNGEMTNLRKVAKSLPSHFALGRNRNHQGLAAAIIKLWEKS 465

Query: 1183 LVVKIAVKRGVQNTNNKLMAEELKALIGGTLLLRNKYYIVIYRGKDFIPASVATALAERE 1362
            LV KIAVKRG+QNTNNKLMAEELK L GG LLLRNKYYIVIYRGKDF+P +VA  LAER+
Sbjct: 466  LVAKIAVKRGIQNTNNKLMAEELKNLTGGVLLLRNKYYIVIYRGKDFLPTTVAATLAERQ 525

Query: 1363 ELTKEIQDAEEQLR---------KRTIGEPSVNAPEGDAPVGTLAEFLEAQARWGRQIST 1515
            +L K++QD EEQ+R         K+ +        EG A  GTLAEF EAQARWGR+I++
Sbjct: 526  KLAKQVQDLEEQVRVQDIEQKMQKKAVDSVPSGEEEGQALAGTLAEFYEAQARWGREITS 585

Query: 1516 EERDAMKEEASRYKTTKLFKRVEHKLSIAQAKKARAEQLLTKIEASMVPVNPCEDQETIT 1695
            EER+ M EEA+  K  +L KR+EHK ++AQAKK RAE+LL KIEASMVP  P  DQETIT
Sbjct: 586  EEREKMIEEAAVAKHARLVKRIEHKAAVAQAKKLRAEKLLAKIEASMVPAGPDYDQETIT 645

Query: 1696 DEERSVFRRIGLRMKAYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKTLAFVESTAR 1875
            +EER +FRR+GLRMKAYLPLGIRGVFDGVIENMHLHWKHRELVKLI+KQKTLAFVE TAR
Sbjct: 646  EEERVMFRRVGLRMKAYLPLGIRGVFDGVIENMHLHWKHRELVKLITKQKTLAFVEDTAR 705

Query: 1876 LLEYESGGILVAIEPVPKGYALIYYRGKNYQRPISLRPRNLLTKAKALKRAIAIQRHEAL 2055
            LLEYESGGILVAIE VPKG+ALIYYRGKNY+RPISLRPRNLLTKAKALKR++A+QRHEAL
Sbjct: 706  LLEYESGGILVAIERVPKGFALIYYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHEAL 765

Query: 2056 SQHIVELEKNIEVMKEELGISEN-EEIATTGTNTMQSDDESSF 2181
            SQHI ELE  IE M++++  S++ ++  +  T+   +D+ S F
Sbjct: 766  SQHISELETTIEQMQDKIVASKSGQDEGSWSTDENLNDNVSEF 808


>ref|XP_002317913.2| hypothetical protein POPTR_0012s05260g [Populus trichocarpa]
            gi|550326426|gb|EEE96133.2| hypothetical protein
            POPTR_0012s05260g [Populus trichocarpa]
          Length = 807

 Score =  838 bits (2164), Expect = 0.0
 Identities = 443/705 (62%), Positives = 527/705 (74%), Gaps = 18/705 (2%)
 Frame = +1

Query: 70   WLQQWDPPESSTSQAP----AKRKPKEPDVGRG-GSIERIVYRLRNLELSCE---EVEGV 225
            W+ +W P ++ + + P    ++ KP      +G  +IERIV RLRNL L  +   E+EG+
Sbjct: 64   WISKWKPSQNHSIKNPPSEVSQEKPHYFSNDKGQNAIERIVLRLRNLGLGSDDEDELEGL 123

Query: 226  DGDS-KETPLSGKERLGELLERTWSRPHTCQMV-------DRILLPWEREDDRGFVEEE- 378
            +G       L+G+ERLG+LL+R W RP T           D  +LPWERE+ RG VE E 
Sbjct: 124  EGSEINGGGLTGEERLGDLLKREWVRPDTVVFSNDEGSDSDESVLPWEREE-RGAVEMEG 182

Query: 379  -VTKGEKRKRLRAPTLAELTIEDSXXXXXXXXXXXXXXXXTVPKAGVTQAITEKIHDAWR 555
             +  G KR R +APTLAELTIED                 ++PKAG+T A+ E IHD WR
Sbjct: 183  GIESGRKR-RGKAPTLAELTIEDEELRRLRRMGMFIRERISIPKAGITNAVLENIHDRWR 241

Query: 556  KSEIVRLKFHEDLVHDMKTAHELVESRTGGLVIWRSGSVMVVYRGSNYKRPSRTQLPDVQ 735
            K E+VRLKFHE L HDMKTAHE+VE RTGGLVIWR+GSVMVV+RG+NY+ P     P   
Sbjct: 242  KEELVRLKFHEVLAHDMKTAHEIVERRTGGLVIWRAGSVMVVFRGTNYQGPPSKLQP--- 298

Query: 736  NNQTLVSNETESLFIPDVSETTTLVENVDHSVTSKPVTSSSFDLNLKHEKNLAEEEVEFN 915
                    E ++LF+PDVS T +++    +  TS    S       +  +N+ EEE E N
Sbjct: 299  -----ADREGDALFVPDVSSTDSVMTRSSNIATSSSEKSKLVMRITEPTENMTEEEAELN 353

Query: 916  RLLDGLGPRFVDWWGTGILPVDADLLPQNIPGFRTPFRLLPSGMRARLTNSEMTNLRKLA 1095
             LLD LGPRF +WWGTG+LPVDADLLP  +P ++TPFRLLP GMRARLTN+EMTN+RKLA
Sbjct: 354  SLLDDLGPRFEEWWGTGLLPVDADLLPPKVPCYKTPFRLLPVGMRARLTNAEMTNMRKLA 413

Query: 1096 KRLPCHFALGRNRHHHGLADAILKIWEKSLVVKIAVKRGVQNTNNKLMAEELKALIGGTL 1275
            K LPCHFALGRNR+H GLA AILK+WEKSLV KIAVKRG+QNTNNKLMA+ELK L GG L
Sbjct: 414  KALPCHFALGRNRNHQGLAVAILKLWEKSLVAKIAVKRGIQNTNNKLMADELKMLTGGVL 473

Query: 1276 LLRNKYYIVIYRGKDFIPASVATALAEREELTKEIQDAEEQLRKRTIGEPSVNAPEGDAP 1455
            LLRNKYYIVI+RGKDF+P SVA ALAER+E+TK+IQD EE++R  ++        EG A 
Sbjct: 474  LLRNKYYIVIFRGKDFLPQSVAAALAERQEVTKQIQDVEERVRSNSVEAAPSGEDEGKAL 533

Query: 1456 VGTLAEFLEAQARWGRQISTEERDAMKEEASRYKTTKLFKRVEHKLSIAQAKKARAEQLL 1635
             GTLAEF EAQARWGR ISTEER+ M EEAS+ KT +L KR EHKL+IAQAKK RAE LL
Sbjct: 534  AGTLAEFYEAQARWGRDISTEEREKMIEEASKAKTARLVKRTEHKLAIAQAKKLRAESLL 593

Query: 1636 TKIEASMVPVNPCEDQETITDEERSVFRRIGLRMKAYLPLGIRGVFDGVIENMHLHWKHR 1815
            +KIE +MVP  P  DQETI++EER +FRR+GLRMKAYLPLGIRGVFDGVIENMHLHWKHR
Sbjct: 594  SKIETTMVPSGPDFDQETISEEERVMFRRVGLRMKAYLPLGIRGVFDGVIENMHLHWKHR 653

Query: 1816 ELVKLISKQKTLAFVESTARLLEYESGGILVAIEPVPKGYALIYYRGKNYQRPISLRPRN 1995
            ELVKLISKQKTLAFVE TA+LLEYESGG+LVAIE VPKG+ALIYYRGKNY+RPIS+RPRN
Sbjct: 654  ELVKLISKQKTLAFVEDTAKLLEYESGGVLVAIERVPKGFALIYYRGKNYRRPISIRPRN 713

Query: 1996 LLTKAKALKRAIAIQRHEALSQHIVELEKNIEVMKEELGISENEE 2130
            LLTKAKALKR++A+QRHEALSQHI ELEKNIE M +E+G+S+ EE
Sbjct: 714  LLTKAKALKRSVAMQRHEALSQHIFELEKNIEEMVKEMGLSKEEE 758


>emb|CBI15459.3| unnamed protein product [Vitis vinifera]
          Length = 830

 Score =  836 bits (2160), Expect = 0.0
 Identities = 446/725 (61%), Positives = 529/725 (72%), Gaps = 19/725 (2%)
 Frame = +1

Query: 13   DEDGRLPSGSTNPPFRSAPWLQQWDPPESSTSQAPAKRKPKEPDV-------GRGGS--I 165
            D      S +TNP   +  W+ +W  P  S          K  D        GR G+  I
Sbjct: 59   DHQNSRKSSNTNPNSSTKSWINKWPSPNPSIESEHKGIDSKGRDGTESRYFDGRSGTSAI 118

Query: 166  ERIVYRLRNLELSCEEVEGVDGDSKE---TPLSGKERLGELLERTWSRPHTCQMVDR--- 327
            ERIV RLRNL L  ++ +  +G+ +     P++G E+LG+LL+R W RP +  + D    
Sbjct: 119  ERIVLRLRNLGLGSDDEDKNEGEVESGDTMPVTGDEKLGDLLQRDWVRPDSMLIEDEDED 178

Query: 328  -ILLPWEREDDRGFVEEEVTKGEKRKRLRAPTLAELTIEDSXXXXXXXXXXXXXXXXTVP 504
             ++LPWER ++R   EEE     KR+ +RAPTLAELTIED                  VP
Sbjct: 179  DMILPWERGEERQ--EEEGDGRLKRRAVRAPTLAELTIEDEELRRLRRLGMTIRERINVP 236

Query: 505  KAGVTQAITEKIHDAWRKSEIVRLKFHEDLVHDMKTAHELVESRTGGLVIWRSGSVMVVY 684
            KAG+TQA+  KIH+ WRK E+VRLKFHE L HDMKTAHE+VE RTGGLV WRSGSVMVV+
Sbjct: 237  KAGITQAVLGKIHEKWRKEELVRLKFHEALAHDMKTAHEIVERRTGGLVTWRSGSVMVVF 296

Query: 685  RGSNYKRPSRTQLPDVQNNQTLVSNETESLFIPDVSETTTLVENVDHSVTSKPVTSSSFD 864
            RG+NY+ P + Q  D          E +SLF+PDVS         D++        S   
Sbjct: 297  RGTNYEGPPKPQPVD---------GEGDSLFVPDVSSVDNPAMRNDNNGGPTLEKGSLPV 347

Query: 865  LNLKHEKNLAEEEVEFNRLLDGLGPRFVDWWGTGILPVDADLLPQNIPGFRTPFRLLPSG 1044
             N  H +N+ EEE E+N LLDGLGPRFVDWWGTG+LPVD DLLPQ+IPG++TP R+LP+G
Sbjct: 348  RNPVHAENMTEEEAEYNSLLDGLGPRFVDWWGTGVLPVDGDLLPQSIPGYKTPLRILPTG 407

Query: 1045 MRARLTNSEMTNLRKLAKRLPCHFALGRNRHHHGLADAILKIWEKSLVVKIAVKRGVQNT 1224
            MR RLTN+EMTNLRKLAK LPCHFALGRNR+H GLA AI+K+WEKS+VVKIAVK G+QNT
Sbjct: 408  MRPRLTNAEMTNLRKLAKSLPCHFALGRNRNHQGLAAAIIKLWEKSIVVKIAVKPGIQNT 467

Query: 1225 NNKLMAEELKALIGGTLLLRNKYYIVIYRGKDFIPASVATALAEREELTKEIQDAEEQLR 1404
            NNKLMAEE+K L GG LLLRNKYYIVIYRGKDF+P SVA AL+EREELTK IQ  EE++R
Sbjct: 468  NNKLMAEEIKNLTGGVLLLRNKYYIVIYRGKDFLPTSVAAALSEREELTKHIQVVEEKVR 527

Query: 1405 KRTIGEPSVNAPE---GDAPVGTLAEFLEAQARWGRQISTEERDAMKEEASRYKTTKLFK 1575
              T G  ++ + E   G    GTLAEF EAQARWGR+IS EE + M EEASR K+ ++ K
Sbjct: 528  --TGGAEAIPSGEDGVGQPLAGTLAEFYEAQARWGREISAEEHEKMIEEASRAKSARVVK 585

Query: 1576 RVEHKLSIAQAKKARAEQLLTKIEASMVPVNPCEDQETITDEERSVFRRIGLRMKAYLPL 1755
            R+EHKL++AQAKK RAE+LL KIEASM+P  P +DQETITDEER +FRR+GLRMKAYL L
Sbjct: 586  RIEHKLALAQAKKLRAERLLAKIEASMIPAGPSDDQETITDEERFMFRRLGLRMKAYLLL 645

Query: 1756 GIRGVFDGVIENMHLHWKHRELVKLISKQKTLAFVESTARLLEYESGGILVAIEPVPKGY 1935
            G+RGVFDGVIENMHLHWKHRELVKLISKQKTLAFVE TARLLEYESGGILVAIE VPKGY
Sbjct: 646  GVRGVFDGVIENMHLHWKHRELVKLISKQKTLAFVEDTARLLEYESGGILVAIERVPKGY 705

Query: 1936 ALIYYRGKNYQRPISLRPRNLLTKAKALKRAIAIQRHEALSQHIVELEKNIEVMKEELGI 2115
            ALIYYRGKNY+RP+SLRPRNLLTKAKALKR++A+QRHEALSQHI ELE+ IE MK E+G 
Sbjct: 706  ALIYYRGKNYRRPVSLRPRNLLTKAKALKRSVAMQRHEALSQHISELERTIEQMKMEIGD 765

Query: 2116 SENEE 2130
            S++ E
Sbjct: 766  SKDAE 770


>emb|CAN72582.1| hypothetical protein VITISV_035294 [Vitis vinifera]
          Length = 850

 Score =  834 bits (2155), Expect = 0.0
 Identities = 445/725 (61%), Positives = 528/725 (72%), Gaps = 19/725 (2%)
 Frame = +1

Query: 13   DEDGRLPSGSTNPPFRSAPWLQQWDPPESSTSQAPAKRKPKEPDV-------GRGGS--I 165
            D      S +TNP   +  W+ +W  P  S          K  D        GR G+  I
Sbjct: 59   DHQNSRKSSNTNPNSSTKSWINKWPSPNPSIESEHKGIDSKGRDGTESRYFDGRSGTSAI 118

Query: 166  ERIVYRLRNLELSCEEVEGVDGDSKE---TPLSGKERLGELLERTWSRPHTCQMVDR--- 327
            ERIV RLRNL L  ++ +  +G+ +     P++G E+LG+LL+R W RP +  + D    
Sbjct: 119  ERIVLRLRNLGLGSDDEDKNEGEVESGDTMPVTGDEKLGDLLQRDWVRPDSMLIEDEDED 178

Query: 328  -ILLPWEREDDRGFVEEEVTKGEKRKRLRAPTLAELTIEDSXXXXXXXXXXXXXXXXTVP 504
             ++LPWER ++R   EEE     KR+ +RAPTLAELTIED                  VP
Sbjct: 179  DMILPWERGEERQ--EEEGDGRLKRRAVRAPTLAELTIEDEELRRLRRLGMTIRERINVP 236

Query: 505  KAGVTQAITEKIHDAWRKSEIVRLKFHEDLVHDMKTAHELVESRTGGLVIWRSGSVMVVY 684
            KAG+TQA+  KIH+ WRK E+VRLKFHE L HDMKTAHE+VE RTGGLV WRSGSVMVV+
Sbjct: 237  KAGITQAVLGKIHEKWRKEELVRLKFHEALAHDMKTAHEIVERRTGGLVTWRSGSVMVVF 296

Query: 685  RGSNYKRPSRTQLPDVQNNQTLVSNETESLFIPDVSETTTLVENVDHSVTSKPVTSSSFD 864
            RG+NY+ P + Q  D          E +SLF+PDVS         D++        S   
Sbjct: 297  RGTNYEGPPKPQPVD---------GEGDSLFVPDVSSVDNPAMRNDNNGGPTLEKGSLPV 347

Query: 865  LNLKHEKNLAEEEVEFNRLLDGLGPRFVDWWGTGILPVDADLLPQNIPGFRTPFRLLPSG 1044
             N  H +N+ EEE E+N LLDGLGPRFVDWWGTG+LPVD DLLPQ+IPG++TP R+LP+G
Sbjct: 348  RNPVHAENMTEEEAEYNSLLDGLGPRFVDWWGTGVLPVDGDLLPQSIPGYKTPLRILPTG 407

Query: 1045 MRARLTNSEMTNLRKLAKRLPCHFALGRNRHHHGLADAILKIWEKSLVVKIAVKRGVQNT 1224
            MR RLTN+EMTNLRKLAK LPCHFALGRNR+H GLA AI+K+WEKS+VVKIAVK G+QNT
Sbjct: 408  MRPRLTNAEMTNLRKLAKSLPCHFALGRNRNHQGLAAAIIKLWEKSIVVKIAVKPGIQNT 467

Query: 1225 NNKLMAEELKALIGGTLLLRNKYYIVIYRGKDFIPASVATALAEREELTKEIQDAEEQLR 1404
            NNKLMAEE+K L GG LLLRNKYYIVIYRGKDF+P SVA AL+EREELTK IQ  EE++R
Sbjct: 468  NNKLMAEEIKNLTGGVLLLRNKYYIVIYRGKDFLPTSVAAALSEREELTKHIQVVEEKVR 527

Query: 1405 KRTIGEPSVNAPE---GDAPVGTLAEFLEAQARWGRQISTEERDAMKEEASRYKTTKLFK 1575
              T G  ++ + E   G    GTLAEF EAQARWGR+IS EE + M EEASR K+ ++ K
Sbjct: 528  --TGGAEAIPSGEDGVGQPLAGTLAEFYEAQARWGREISAEEHEKMIEEASRAKSARVVK 585

Query: 1576 RVEHKLSIAQAKKARAEQLLTKIEASMVPVNPCEDQETITDEERSVFRRIGLRMKAYLPL 1755
            R+EHKL++AQAKK R E+LL KIEASM+P  P +DQETITDEER +FRR+GLRMKAYL L
Sbjct: 586  RIEHKLALAQAKKLRPERLLAKIEASMIPAGPSDDQETITDEERFMFRRLGLRMKAYLLL 645

Query: 1756 GIRGVFDGVIENMHLHWKHRELVKLISKQKTLAFVESTARLLEYESGGILVAIEPVPKGY 1935
            G+RGVFDGVIENMHLHWKHRELVKLISKQKTLAFVE TARLLEYESGGILVAIE VPKGY
Sbjct: 646  GVRGVFDGVIENMHLHWKHRELVKLISKQKTLAFVEDTARLLEYESGGILVAIERVPKGY 705

Query: 1936 ALIYYRGKNYQRPISLRPRNLLTKAKALKRAIAIQRHEALSQHIVELEKNIEVMKEELGI 2115
            ALIYYRGKNY+RP+SLRPRNLLTKAKALKR++A+QRHEALSQHI ELE+ IE MK E+G 
Sbjct: 706  ALIYYRGKNYRRPVSLRPRNLLTKAKALKRSVAMQRHEALSQHISELERTIEQMKMEIGD 765

Query: 2116 SENEE 2130
            S++ E
Sbjct: 766  SKDAE 770


>ref|XP_006842297.1| hypothetical protein AMTR_s00079p00107040 [Amborella trichopoda]
            gi|548844363|gb|ERN03972.1| hypothetical protein
            AMTR_s00079p00107040 [Amborella trichopoda]
          Length = 826

 Score =  832 bits (2148), Expect = 0.0
 Identities = 453/746 (60%), Positives = 543/746 (72%), Gaps = 29/746 (3%)
 Frame = +1

Query: 34   SGSTNP-PFRSAP---WLQQW---DP---PESSTSQAPAKRKPKEPDVGRGGSIERIVYR 183
            S + NP PF   P   WL +W   DP   P S TS    + +  + D GR  +I RIV R
Sbjct: 53   SSNPNPKPFPKNPPSSWLNKWTQSDPSSNPNSRTSSEEDRVQYFDGDKGRS-AIHRIVDR 111

Query: 184  LRNLELSCEEVEGVDGDSKETPLSGKER-------LGELLERTWSRPHTCQMVDRI---L 333
            LRNL LS  + +G D DSK+ P   +E+       LG LL++TW RP      DRI   L
Sbjct: 112  LRNLGLS--DGDG-DDDSKDLPWGSREKGNLDDKDLGFLLQKTWERPDQVVNGDRISDAL 168

Query: 334  LPWEREDDRGFVEEEVTKGEKRKRLRAPTLAELTIEDSXXXXXXXXXXXXXXXXTVPKAG 513
            LPWER ++     E  TK EK +R++APTLAELTIEDS                 VPKAG
Sbjct: 169  LPWERSEEG----EYETKKEKSRRIKAPTLAELTIEDSELRRLRKLGITLRERINVPKAG 224

Query: 514  VTQAITEKIHDAWRKSEIVRLKFHEDLVHDMKTAHELVESRTGGLVIWRSGSVMVVYRGS 693
            VTQA+ EKIH AWRKSE+VRLKFHE LVHDMKTAHE+VE RTGGLVIW SGSVMVVYRGS
Sbjct: 225  VTQAVLEKIHMAWRKSELVRLKFHETLVHDMKTAHEIVERRTGGLVIWMSGSVMVVYRGS 284

Query: 694  NYKRPSRTQLPDVQNNQTLVSN---ETESLFIPDVSETTTLVENVDHSVTSKPVTSSSFD 864
             Y +   ++ P+    + + +N   E ++LF+PDV+ +  + E+   +        S F 
Sbjct: 285  TYGQQPSSR-PNTSEEEVIATNLVHEGDTLFVPDVAHSEKIPESARKNSIITAEKPSLFS 343

Query: 865  LNLKHEKNLAEEEVEFNRLLDGLGPRFVDWWGTGILPVDADLLPQNIPGFRTPFRLLPSG 1044
            ++      L EEE E+N +LDGLGPRFV+WWGTG LPVDADLLPQ +PG++ PFRLLP G
Sbjct: 344  VD--EVPTLTEEEKEYNSILDGLGPRFVEWWGTGFLPVDADLLPQKVPGYKPPFRLLPIG 401

Query: 1045 MRARLTNSEMTNLRKLAKRLPCHFALGRNRHHHGLADAILKIWEKSLVVKIAVKRGVQNT 1224
            MR+RLTN+EMTNLRK A++LP HFALGRNR+H G+A AI+K+WE+SL+VKIAVKRG+QNT
Sbjct: 402  MRSRLTNAEMTNLRKFARKLPSHFALGRNRNHQGMAAAIIKLWERSLIVKIAVKRGIQNT 461

Query: 1225 NNKLMAEELKALIGGTLLLRNKYYIVIYRGKDFIPASVATALAEREELTKEIQDAEEQLR 1404
            NNKLMAEELK L GG LLLRNKYYIVIYRGKDF+P SVA+ALAER+ LTK IQD EE+ R
Sbjct: 462  NNKLMAEELKKLTGGILLLRNKYYIVIYRGKDFLPPSVASALAERQALTKNIQDEEERAR 521

Query: 1405 KRTIGEPSVNAPEGDAPVGTLAEFLEAQARWGRQISTEERDAMKEEASRYKTTKLFKRVE 1584
            K  IG       + +   GTLAEF EAQARWGR+I+ EE++ MKEE S+ K   L +R+E
Sbjct: 522  KGAIGAAEAELEKQEVLAGTLAEFKEAQARWGREIAAEEQEKMKEEISKAKHAGLVRRIE 581

Query: 1585 HKLSIAQAKKARAEQLLTKIEASMVPVNPCEDQETITDEERSVFRRIGLRMKAYLPLGIR 1764
            HK ++AQAKK RAE+ L+KIEASMVPV P +DQET+TDEER +FRR+GLRMKAYLPLGIR
Sbjct: 582  HKFAVAQAKKLRAEKQLSKIEASMVPVGPSDDQETVTDEERYMFRRVGLRMKAYLPLGIR 641

Query: 1765 GVFDGVIENMHLHWKHRELVKLISKQKTLAFVESTARLLEYESGGILVAIEPVPKGYALI 1944
            GVFDGVIENMHLHWKHRELVKLISKQKTLAFVE TARLLEYESGGIL+AIE VPKGYALI
Sbjct: 642  GVFDGVIENMHLHWKHRELVKLISKQKTLAFVEETARLLEYESGGILIAIERVPKGYALI 701

Query: 1945 YYRGKNYQRPISLRPRNLLTKAKALKRAIAIQRHEALSQHIVELEKNIEVMKEELGISEN 2124
            YYRGKNYQRP+++RPRNLLTKAKALKR++ +QRHEALSQHI+ELE+ IE MK EL   E 
Sbjct: 702  YYRGKNYQRPVTIRPRNLLTKAKALKRSVEMQRHEALSQHILELERTIEHMKLELHNPEI 761

Query: 2125 EEIAT------TGTNTMQSDDESSFQ 2184
             E ++       G N    +D S ++
Sbjct: 762  NEGSSWESEENEGNNEYDDEDGSRWE 787


>ref|XP_003530015.2| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X1 [Glycine max]
          Length = 791

 Score =  821 bits (2121), Expect = 0.0
 Identities = 430/730 (58%), Positives = 531/730 (72%), Gaps = 10/730 (1%)
 Frame = +1

Query: 28   LPSGSTNPPFRSAPWLQQWDPPESSTSQAPAKRKPKEPDVGRGGSIERIVYRLRNLELSC 207
            LP+   NP   SAPWL +   P+ +T   P       PD      +ERIV RLRNL L  
Sbjct: 43   LPTPKPNP---SAPWLTKSPSPKRATE--PLTAGDPIPDKKPHNPVERIVLRLRNLGLPS 97

Query: 208  EEVEGVDGD----SKETPLSGKERLGELLERTWSRPHTCQM-----VDRILLPWEREDDR 360
            EE E  + +    +   P++G+ERLGELL R W RP    +      + ++LPWERE+++
Sbjct: 98   EEEEQEEEEEIPANNPAPVTGEERLGELLRREWVRPDAVLVGEDDGEEEMILPWEREEEK 157

Query: 361  GFVEEEVTKGE-KRKRLRAPTLAELTIEDSXXXXXXXXXXXXXXXXTVPKAGVTQAITEK 537
              V     +G  K++R+RAP+LA+LT+ED                 +VPKAG+TQ + EK
Sbjct: 158  EVVVVVSEEGLLKKRRVRAPSLADLTLEDELLRRLRREGMRVRERVSVPKAGLTQEVMEK 217

Query: 538  IHDAWRKSEIVRLKFHEDLVHDMKTAHELVESRTGGLVIWRSGSVMVVYRGSNYKRPSRT 717
            IH  WRK E+VRLKFHE+L  DM+ AHE+VE RTGGLV WRSGSVM+VYRG +Y+ P   
Sbjct: 218  IHKRWRKEELVRLKFHEELAKDMRKAHEIVERRTGGLVTWRSGSVMMVYRGIDYQGPD-- 275

Query: 718  QLPDVQNNQTLVSNETESLFIPDVSETTTLVENVDHSVTSKPVTSSSFDLNLKHEKNLAE 897
                  + + +   + +  F+PDVS+          + TS    S       +H +N++E
Sbjct: 276  ------SQKEVNEKKGDGFFVPDVSKRED-----SSTATSTSEKSEVVVREREHPENMSE 324

Query: 898  EEVEFNRLLDGLGPRFVDWWGTGILPVDADLLPQNIPGFRTPFRLLPSGMRARLTNSEMT 1077
             E E+N LLDGLGPRFV WWGTGILPVDADLLP+ +PG++TPFRLLP+GMR+RLTN+EMT
Sbjct: 325  AEAEYNALLDGLGPRFVGWWGTGILPVDADLLPRTVPGYKTPFRLLPTGMRSRLTNAEMT 384

Query: 1078 NLRKLAKRLPCHFALGRNRHHHGLADAILKIWEKSLVVKIAVKRGVQNTNNKLMAEELKA 1257
            NLRKLAK LPCHFALGRNR+H GLA AILK+WEKSLV KIAVKRG+QNTNN+LMAEELK 
Sbjct: 385  NLRKLAKSLPCHFALGRNRNHQGLACAILKLWEKSLVAKIAVKRGIQNTNNELMAEELKM 444

Query: 1258 LIGGTLLLRNKYYIVIYRGKDFIPASVATALAEREELTKEIQDAEEQLRKRTIGEPSVNA 1437
            L GGTLLLRNKY+IVIYRGKDF+P SVA  LAEREELTK++QD E+++R R +    +  
Sbjct: 445  LTGGTLLLRNKYFIVIYRGKDFVPTSVAAVLAEREELTKQVQDVEDKVRCRAVDAIPLGQ 504

Query: 1438 PEGDAPVGTLAEFLEAQARWGRQISTEERDAMKEEASRYKTTKLFKRVEHKLSIAQAKKA 1617
             E  A  GTLAEF EAQARWGR+IS EER+ M EEA++ KT KL +++EHK+ IAQ KK 
Sbjct: 505  GEATAQAGTLAEFYEAQARWGREISPEEREKMVEEAAKTKTAKLVRQIEHKIFIAQTKKL 564

Query: 1618 RAEQLLTKIEASMVPVNPCEDQETITDEERSVFRRIGLRMKAYLPLGIRGVFDGVIENMH 1797
            RAE+LL KIEASMVP  P  DQETITDEER +FR++GLRMK YLPLGIRGVFDGV+ENMH
Sbjct: 565  RAEKLLAKIEASMVPAGPDYDQETITDEERVMFRKVGLRMKPYLPLGIRGVFDGVVENMH 624

Query: 1798 LHWKHRELVKLISKQKTLAFVESTARLLEYESGGILVAIEPVPKGYALIYYRGKNYQRPI 1977
            LHWKHRELVKL++KQKT+AFVE TARLLEYESGGILVAIE V K +ALIYYRGKNY+RPI
Sbjct: 625  LHWKHRELVKLMTKQKTVAFVEDTARLLEYESGGILVAIEKVSKEFALIYYRGKNYKRPI 684

Query: 1978 SLRPRNLLTKAKALKRAIAIQRHEALSQHIVELEKNIEVMKEELGISENEEIATTGTNTM 2157
            +LRPRNLLTK KALKR +A+QRHEALSQHI ELEK IE MK+ELG++++ ++   G  ++
Sbjct: 685  TLRPRNLLTKGKALKRHVAMQRHEALSQHITELEKTIEQMKKELGMTQDSDVEDGG--SI 742

Query: 2158 QSDDESSFQM 2187
            + DD +   +
Sbjct: 743  EEDDHNQIDI 752


>ref|XP_006440978.1| hypothetical protein CICLE_v10018859mg [Citrus clementina]
            gi|567896982|ref|XP_006440979.1| hypothetical protein
            CICLE_v10018859mg [Citrus clementina]
            gi|567896984|ref|XP_006440980.1| hypothetical protein
            CICLE_v10018859mg [Citrus clementina]
            gi|557543240|gb|ESR54218.1| hypothetical protein
            CICLE_v10018859mg [Citrus clementina]
            gi|557543241|gb|ESR54219.1| hypothetical protein
            CICLE_v10018859mg [Citrus clementina]
            gi|557543242|gb|ESR54220.1| hypothetical protein
            CICLE_v10018859mg [Citrus clementina]
          Length = 833

 Score =  817 bits (2111), Expect = 0.0
 Identities = 435/722 (60%), Positives = 524/722 (72%), Gaps = 29/722 (4%)
 Frame = +1

Query: 52   PFRSAPWLQQWDPPESSTSQAPAK--------RKPKEPDV----------GRGGSIERIV 177
            P  SAPWL  W  P+  +++   K         K   PD           GR  +IERIV
Sbjct: 72   PSTSAPWLNNWSRPKPPSTENANKLGGRNQIDEKQTSPDSYPRYSDSDNKGRN-AIERIV 130

Query: 178  YRLRNLELSCEEVEGVDGDSKETPLS----GKERLGELLERTWSRPHTCQMV-----DRI 330
             RLRNL L  ++ E  +G+ +E  ++    G+ERL +LL R W RP+T         D  
Sbjct: 131  LRLRNLGLGSDDEE--EGEEEEDDINDAATGEERLEDLLRREWVRPNTVLREVEGEEDDS 188

Query: 331  LLPWEREDDRGF-VEEEVTKGE-KRKRLRAPTLAELTIEDSXXXXXXXXXXXXXXXXTVP 504
            LLPWERE++       E   GE +R+R++APTLAELTIED                  VP
Sbjct: 189  LLPWEREEEENLRAGGEKPAGETRRRRMKAPTLAELTIEDEELRRLRRNGMYLRERINVP 248

Query: 505  KAGVTQAITEKIHDAWRKSEIVRLKFHEDLVHDMKTAHELVESRTGGLVIWRSGSVMVVY 684
            KAG+TQ +  KIHD WRK E+VRLKFHE L  DMKTAHE+VE RTGGLVIWR+GSVMVVY
Sbjct: 249  KAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVERRTGGLVIWRAGSVMVVY 308

Query: 685  RGSNYKRPSRTQLPDVQNNQTLVSNETESLFIPDVSETTTLVENVDHSVTSKPVTSSSFD 864
            RGSNY  PS    P        +  + ++LF+P VS T           +  PV      
Sbjct: 309  RGSNYAGPSSKPQP--------IDGDGDTLFVPHVSSTDGSTARSVDEKSEVPVRI---- 356

Query: 865  LNLKHEKNLAEEEVEFNRLLDGLGPRFVDWWGTGILPVDADLLPQNIPGFRTPFRLLPSG 1044
              L H K + EEE E N LLD LGPRF +WWGTGILPVDADLLP  + G++TPFRLLP+G
Sbjct: 357  --LDHSKPMTEEEAECNSLLDSLGPRFQEWWGTGILPVDADLLPPKVDGYKTPFRLLPTG 414

Query: 1045 MRARLTNSEMTNLRKLAKRLPCHFALGRNRHHHGLADAILKIWEKSLVVKIAVKRGVQNT 1224
            MR+RLTN+EMT+LR+LA+ LPCHFALGRNR+H GLA AILK+WEKSLV KIAVKRG+QNT
Sbjct: 415  MRSRLTNAEMTDLRRLARSLPCHFALGRNRNHQGLAVAILKLWEKSLVAKIAVKRGIQNT 474

Query: 1225 NNKLMAEELKALIGGTLLLRNKYYIVIYRGKDFIPASVATALAEREELTKEIQDAEEQLR 1404
            NNKLMAEELK+L GGTLL RNK+YIV+YRGKDF+P +VA+ALAERE+  K+IQD EE++R
Sbjct: 475  NNKLMAEELKSLTGGTLLQRNKFYIVLYRGKDFLPPNVASALAEREQCAKQIQDVEEKVR 534

Query: 1405 KRTIGEPSVNAPEGDAPVGTLAEFLEAQARWGRQISTEERDAMKEEASRYKTTKLFKRVE 1584
             +T+        EG AP GTLAEF EAQ RWGR++S EER+ M EEAS+ K  +L KR+E
Sbjct: 535  SKTLEATPSGETEGQAPAGTLAEFYEAQKRWGREVSAEEREKMVEEASKAKHGRLVKRIE 594

Query: 1585 HKLSIAQAKKARAEQLLTKIEASMVPVNPCEDQETITDEERSVFRRIGLRMKAYLPLGIR 1764
            HKL+++QAKK RAE+LL KIEASMVP  P  DQETITDEER++FRR+GLRMKA+LPLGIR
Sbjct: 595  HKLAVSQAKKLRAERLLAKIEASMVPSGPDYDQETITDEERAMFRRVGLRMKAFLPLGIR 654

Query: 1765 GVFDGVIENMHLHWKHRELVKLISKQKTLAFVESTARLLEYESGGILVAIEPVPKGYALI 1944
            GVFDGV+ENMHLHWK+RELVKLI+KQKTLA+VE TARLLEYES GIL+AIE VPKG+ALI
Sbjct: 655  GVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESVGILIAIERVPKGFALI 714

Query: 1945 YYRGKNYQRPISLRPRNLLTKAKALKRAIAIQRHEALSQHIVELEKNIEVMKEELGISEN 2124
            +YRGKNY+RPISLRPRNLLTKAKALKR++A+QRHEALSQHI +LE  IE MK+E+G+S++
Sbjct: 715  FYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHEALSQHISDLENTIEQMKKEIGVSKD 774

Query: 2125 EE 2130
            EE
Sbjct: 775  EE 776


>ref|XP_003533366.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Glycine max]
          Length = 791

 Score =  816 bits (2108), Expect = 0.0
 Identities = 428/733 (58%), Positives = 530/733 (72%), Gaps = 13/733 (1%)
 Frame = +1

Query: 28   LPSGSTNPPFRSAPWLQQWDPPESSTSQAPAKRKPKEPDVGRGGSIERIVYRLRNLELSC 207
            LP+   NP   SAPWL +   P+ +    PA      PD     +++RIV RLRNL L  
Sbjct: 41   LPTPKPNP---SAPWLTKSPSPKRAVEPLPAG--DPTPDRKPQNAVDRIVLRLRNLGLPS 95

Query: 208  EEVEGVDGDSKE------TPLSGKERLGELLERTWSRPHTCQM------VDRILLPWERE 351
            EE E      +E       P++G+ERLGELL+R W RP    +       + ++LPWER+
Sbjct: 96   EEEEQEQEHEEEIPATNPAPVTGEERLGELLQREWVRPDAVLVGEDDDEEEEMMLPWERD 155

Query: 352  DDRGFVEEEVTKGE-KRKRLRAPTLAELTIEDSXXXXXXXXXXXXXXXXTVPKAGVTQAI 528
            ++   V     +G  K++R+RAP+LA+LT+ED                 +VPKAG+T+ +
Sbjct: 156  EEEKEVVVVSEEGLLKKRRVRAPSLADLTLEDELLRRLRREGMRVRERVSVPKAGLTEEV 215

Query: 529  TEKIHDAWRKSEIVRLKFHEDLVHDMKTAHELVESRTGGLVIWRSGSVMVVYRGSNYKRP 708
             EKIH  WRK E+VRLKFHE+L  DM+ AHE+VE RTGGLV WRSGSVM+VYRG +Y+ P
Sbjct: 216  MEKIHKRWRKEELVRLKFHEELAKDMRKAHEIVERRTGGLVTWRSGSVMMVYRGIDYQGP 275

Query: 709  SRTQLPDVQNNQTLVSNETESLFIPDVSETTTLVENVDHSVTSKPVTSSSFDLNLKHEKN 888
                     + + L   + +  F+PDVS+        D + TS    S       +H +N
Sbjct: 276  D--------SRKELNEKKGDGFFVPDVSKRE------DSTATSTSEKSEVVVREREHPEN 321

Query: 889  LAEEEVEFNRLLDGLGPRFVDWWGTGILPVDADLLPQNIPGFRTPFRLLPSGMRARLTNS 1068
            ++E E E+N LLDGLGPRF  WWGTGILPVDADLLP+ +PG++TPFRLLP+GMR+RLTN+
Sbjct: 322  MSEAEAEYNALLDGLGPRFFGWWGTGILPVDADLLPRTVPGYKTPFRLLPTGMRSRLTNA 381

Query: 1069 EMTNLRKLAKRLPCHFALGRNRHHHGLADAILKIWEKSLVVKIAVKRGVQNTNNKLMAEE 1248
            EMTNLRKLAK LPCHFA+GRNR+H GLA AILK+WEKSLV KIAVKRG+QNTNN+LMAEE
Sbjct: 382  EMTNLRKLAKSLPCHFAVGRNRNHQGLACAILKLWEKSLVSKIAVKRGIQNTNNELMAEE 441

Query: 1249 LKALIGGTLLLRNKYYIVIYRGKDFIPASVATALAEREELTKEIQDAEEQLRKRTIGEPS 1428
            LK L GGTLLLRNKY+IVIYRGKDF+P SVA  LAEREELTK++QD E+++R R +    
Sbjct: 442  LKMLTGGTLLLRNKYFIVIYRGKDFVPTSVAAVLAEREELTKQVQDVEDKVRCRAVDAIP 501

Query: 1429 VNAPEGDAPVGTLAEFLEAQARWGRQISTEERDAMKEEASRYKTTKLFKRVEHKLSIAQA 1608
                E  A  GTLAEF EAQARWGR+IS +ER+ M EEA++ KT KL +++EHK+ IAQ 
Sbjct: 502  SGQGEATAQAGTLAEFYEAQARWGREISPDEREKMMEEAAKAKTAKLVRQIEHKIFIAQT 561

Query: 1609 KKARAEQLLTKIEASMVPVNPCEDQETITDEERSVFRRIGLRMKAYLPLGIRGVFDGVIE 1788
            KK RAE+LL KIEASMVP  P  DQETITDEER +FR++GLRMK YLPLGIRGVFDGV+E
Sbjct: 562  KKLRAEKLLAKIEASMVPAGPDYDQETITDEERVMFRKVGLRMKPYLPLGIRGVFDGVVE 621

Query: 1789 NMHLHWKHRELVKLISKQKTLAFVESTARLLEYESGGILVAIEPVPKGYALIYYRGKNYQ 1968
            NMHLHWKHRELVKL++KQKTLAFVE TARLLEYESGGILVAIE V K +ALIYYRGKNY+
Sbjct: 622  NMHLHWKHRELVKLMTKQKTLAFVEDTARLLEYESGGILVAIEKVSKEFALIYYRGKNYK 681

Query: 1969 RPISLRPRNLLTKAKALKRAIAIQRHEALSQHIVELEKNIEVMKEELGISENEEIATTGT 2148
            RPI+LRPRNLLTK KALKR +A+QRHEALSQHI ELEK IE MK+ELG++++ ++   G 
Sbjct: 682  RPITLRPRNLLTKGKALKRHVAMQRHEALSQHITELEKTIEQMKKELGMTQDSDVEDGG- 740

Query: 2149 NTMQSDDESSFQM 2187
             +++ DD +   +
Sbjct: 741  -SIEEDDHNQIDI 752


>ref|XP_006485796.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Citrus sinensis]
          Length = 837

 Score =  814 bits (2103), Expect = 0.0
 Identities = 432/721 (59%), Positives = 523/721 (72%), Gaps = 28/721 (3%)
 Frame = +1

Query: 52   PFRSAPWLQQWDPPESSTSQAPAKRK---------------PKEPDVGRGG--SIERIVY 180
            P  SAPWL  W  P+  +++   K                 P+  D    G  +IERIV 
Sbjct: 72   PSTSAPWLNNWSRPKPPSTENVNKSDGRNQIDEKQTAPDSYPRYSDSDNKGRNAIERIVL 131

Query: 181  RLRNLELSCEEVEGVDGDSKETPLSG----KERLGELLERTWSRPHTCQMV-----DRIL 333
            RLRNL L  ++ E  +G+ +E  ++G    +ERL +LL R W RP+T         D  L
Sbjct: 132  RLRNLGLGSDDEE--EGEEEEDDINGAATGEERLEDLLRREWVRPNTVLREVEGEEDDSL 189

Query: 334  LPWEREDDRGF-VEEEVTKGE-KRKRLRAPTLAELTIEDSXXXXXXXXXXXXXXXXTVPK 507
            LPWERE++       E   GE +R+R++APTLAELTIED                  VPK
Sbjct: 190  LPWEREEEENLRAGGEKPAGETRRRRMKAPTLAELTIEDEELRRLRRNGMYLRERINVPK 249

Query: 508  AGVTQAITEKIHDAWRKSEIVRLKFHEDLVHDMKTAHELVESRTGGLVIWRSGSVMVVYR 687
            AG+TQ +  KIHD WRK E+VRLKFHE L  DMKTAHE+VE RTGGLVIWR+GSVMVVY+
Sbjct: 250  AGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVERRTGGLVIWRAGSVMVVYQ 309

Query: 688  GSNYKRPSRTQLPDVQNNQTLVSNETESLFIPDVSETTTLVENVDHSVTSKPVTSSSFDL 867
            GSNY  PS    P   +       + ++LF+P VS T           +  PV       
Sbjct: 310  GSNYAGPSSKPQPLDGDGD----GDGDTLFVPHVSSTDGSTARSVDEKSEVPVRI----- 360

Query: 868  NLKHEKNLAEEEVEFNRLLDGLGPRFVDWWGTGILPVDADLLPQNIPGFRTPFRLLPSGM 1047
             L H K + EEE E N LLD LGPRF +WWGTGILPVDADLLP  + G++TPFRLLP+GM
Sbjct: 361  -LDHSKPMTEEEAECNSLLDSLGPRFQEWWGTGILPVDADLLPPKVDGYKTPFRLLPTGM 419

Query: 1048 RARLTNSEMTNLRKLAKRLPCHFALGRNRHHHGLADAILKIWEKSLVVKIAVKRGVQNTN 1227
            R+RLTN+EMT+LR+LA+ LPCHFALGRNR+H GLA AILK+WEKSLV KIAVKRG+QNTN
Sbjct: 420  RSRLTNAEMTDLRRLARSLPCHFALGRNRNHQGLAVAILKLWEKSLVAKIAVKRGIQNTN 479

Query: 1228 NKLMAEELKALIGGTLLLRNKYYIVIYRGKDFIPASVATALAEREELTKEIQDAEEQLRK 1407
            NKLMAEELK+L GGTLL RNK+YIV+YRGKDF+P +VA+ALAERE+  K+IQD EE++R 
Sbjct: 480  NKLMAEELKSLTGGTLLQRNKFYIVLYRGKDFLPPNVASALAEREQCAKQIQDVEEKVRS 539

Query: 1408 RTIGEPSVNAPEGDAPVGTLAEFLEAQARWGRQISTEERDAMKEEASRYKTTKLFKRVEH 1587
            +T+        EG AP GTLAEF EAQ RWGR++S EER+ M EEAS+ K  +L KR+EH
Sbjct: 540  KTLEATPSGETEGQAPAGTLAEFYEAQKRWGREVSAEEREKMVEEASKAKHARLVKRIEH 599

Query: 1588 KLSIAQAKKARAEQLLTKIEASMVPVNPCEDQETITDEERSVFRRIGLRMKAYLPLGIRG 1767
            KL+++QAKK RAE+LL KIEASMVP  P  DQETITDEER++FRR+GLRMKA+LPLGIRG
Sbjct: 600  KLAVSQAKKLRAERLLAKIEASMVPSGPDYDQETITDEERAMFRRVGLRMKAFLPLGIRG 659

Query: 1768 VFDGVIENMHLHWKHRELVKLISKQKTLAFVESTARLLEYESGGILVAIEPVPKGYALIY 1947
            VFDGV+ENMHLHWK+RELVKLI+KQKTLA+VE TARLLEYESGGIL+AIE VPKG+ALI+
Sbjct: 660  VFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKGFALIF 719

Query: 1948 YRGKNYQRPISLRPRNLLTKAKALKRAIAIQRHEALSQHIVELEKNIEVMKEELGISENE 2127
            YRGKNY+RPISLRPRNLLTKAKALKR++A+QRHEALSQHI +LE  IE MK+E+G+ ++E
Sbjct: 720  YRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHEALSQHISDLENTIEQMKKEIGVFKDE 779

Query: 2128 E 2130
            E
Sbjct: 780  E 780


>ref|XP_004512920.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Cicer arietinum]
          Length = 809

 Score =  810 bits (2091), Expect = 0.0
 Identities = 435/749 (58%), Positives = 541/749 (72%), Gaps = 33/749 (4%)
 Frame = +1

Query: 31   PSGSTNPPFRSAPWLQQWDPPESSTSQAPAKR----------KPKEPDVGRGGSIERIVY 180
            P  ++NP   + PWL          +++P K           KPK P       +ERIV+
Sbjct: 59   PKSNSNP---TPPWLSS----PKRVTESPIKNESLNLQHDNNKPKNP-------VERIVF 104

Query: 181  RLRNLELSCEEVEGVDGDSK----ETPLSGKERLGELLERTWSRPHTC-----QMVDRIL 333
            RLRNL L+ EE E    + +    E P+SG E+L ELL+R W RP        +  D ++
Sbjct: 105  RLRNLGLAEEEGEKEQQEEEVEVSELPVSGDEKLSELLKRKWVRPDALLDDEDKEEDEMV 164

Query: 334  LPWEREDDRGFVEEEV---TKGEKRKRLRAPTLAELTIEDSXXXXXXXXXXXXXXXXTVP 504
            LPW+RE++R     +V    +G K++ ++AP+LAELT+ED                 +VP
Sbjct: 165  LPWKREEEREMGGGDVGIDEEGLKKRTIKAPSLAELTLEDELLRRLRREGMRVRERVSVP 224

Query: 505  KAGVTQAITEKIHDAWRKSEIVRLKFHEDLVHDMKTAHELVESRTGGLVIWRSGSVMVVY 684
            KAG+TQ + EKIH+ WRK E+VRLKFHE+L  +M+ AHE+VE RTGGLV WR+GSVM+VY
Sbjct: 225  KAGLTQEVMEKIHERWRKEELVRLKFHEELAKNMRVAHEIVERRTGGLVTWRAGSVMMVY 284

Query: 685  RGSNYKRPSRTQLPDVQNNQTLVSNETESLFIPDVSETTTLVENVDHSVTSKPVTSSSFD 864
            RG NY+ P+        +++ L + E +  F+PDVS  ++     D S T+    S+   
Sbjct: 285  RGKNYQGPN--------SSKELDAKEGDGFFVPDVSSKSSS-RTKDSSTTASLKNSAQVR 335

Query: 865  LNLKHEKNLAEEEVEFNRLLDGLGPRFVDWWGTGILPVDADLLPQNIPGFRTPFRLLPSG 1044
             N +  +N+ +EE E+N LLDGLGPRF +WWGTGILPVDADLLP++IPG++TP+RLLP+G
Sbjct: 336  RNDEQPENMTKEEAEYNALLDGLGPRFFEWWGTGILPVDADLLPRDIPGYKTPYRLLPTG 395

Query: 1045 MRARLTNSEMTNLRKLAKRLPCHFALGRNRHHHGLADAILKIWEKSLVVKIAVKRGVQNT 1224
            MR+RLT++E+T+LRK+AK LPCHFALGRNR+H GLA AILK+WEKSL+ KIAVK G+QNT
Sbjct: 396  MRSRLTSAEITDLRKIAKSLPCHFALGRNRYHQGLACAILKLWEKSLIAKIAVKPGIQNT 455

Query: 1225 NNKLMAEELKALIGGTLLLRNKYYIVIYRGKDFIPASVATALAEREELTKEIQDAEEQLR 1404
            NNKLMA+EL  L GGTLLLR+KYYIVIYRGKDF+P  VA  LAER+ELTKE+QD EE++R
Sbjct: 456  NNKLMADELVTLTGGTLLLRDKYYIVIYRGKDFVPTGVAAVLAERQELTKEVQDVEEKVR 515

Query: 1405 -KRTIGEPSVNAPEGDAPV--GTLAEFLEAQARWGRQISTEERDAMKEEASRYKTTKLFK 1575
             K  +  PS    +G+A V  GTLAEF EAQARWGR ISTEER+ M EEA++ K+ KL K
Sbjct: 516  CKAVVATPS---GQGEATVLAGTLAEFYEAQARWGRDISTEERERMIEEAAKAKSVKLVK 572

Query: 1576 RVEHKLSIAQAKKARAEQLLTKIEASMVPVNPCEDQETITDEERSVFRRIGLRMKAYLPL 1755
            ++EH+LS+AQ KK RAE+LL KIE SMVPV P  DQETITDEER+VFRRIGLRMK YLPL
Sbjct: 573  QIEHRLSLAQTKKIRAEKLLAKIEVSMVPVGPDYDQETITDEERAVFRRIGLRMKPYLPL 632

Query: 1756 GIRGVFDGVIENMHLHWKHRELVKLISKQKTLAFVESTARLLEYESGGILVAIEPVPKGY 1935
            GIRGVFDGVIENMHLHWKHRELVKLI+KQK LAFVE TARLLEYESGGILVAIE V K +
Sbjct: 633  GIRGVFDGVIENMHLHWKHRELVKLITKQKNLAFVEDTARLLEYESGGILVAIEKVSKEF 692

Query: 1936 ALIYYRGKNYQRPISLRPRNLLTKAKALKRAIAIQRHEALSQHIVELEKNIEVMKEELGI 2115
            ALIYYRGKNY+RPISLRPRNLLTKAKALKR++A+QRHEALS HI ELE  IE MK+E+G+
Sbjct: 693  ALIYYRGKNYKRPISLRPRNLLTKAKALKRSVAMQRHEALSNHITELETTIEQMKQEIGL 752

Query: 2116 SENEEIATTG--------TNTMQSDDESS 2178
            S++E     G        +   QS+DE S
Sbjct: 753  SDDEWSMKEGHENQLDHNSEFTQSEDEDS 781


>ref|XP_006440981.1| hypothetical protein CICLE_v10018859mg [Citrus clementina]
            gi|557543243|gb|ESR54221.1| hypothetical protein
            CICLE_v10018859mg [Citrus clementina]
          Length = 806

 Score =  808 bits (2086), Expect = 0.0
 Identities = 431/715 (60%), Positives = 517/715 (72%), Gaps = 29/715 (4%)
 Frame = +1

Query: 52   PFRSAPWLQQWDPPESSTSQAPAK--------RKPKEPDV----------GRGGSIERIV 177
            P  SAPWL  W  P+  +++   K         K   PD           GR  +IERIV
Sbjct: 72   PSTSAPWLNNWSRPKPPSTENANKLGGRNQIDEKQTSPDSYPRYSDSDNKGRN-AIERIV 130

Query: 178  YRLRNLELSCEEVEGVDGDSKETPLS----GKERLGELLERTWSRPHTCQMV-----DRI 330
             RLRNL L  ++ E  +G+ +E  ++    G+ERL +LL R W RP+T         D  
Sbjct: 131  LRLRNLGLGSDDEE--EGEEEEDDINDAATGEERLEDLLRREWVRPNTVLREVEGEEDDS 188

Query: 331  LLPWEREDDRGF-VEEEVTKGE-KRKRLRAPTLAELTIEDSXXXXXXXXXXXXXXXXTVP 504
            LLPWERE++       E   GE +R+R++APTLAELTIED                  VP
Sbjct: 189  LLPWEREEEENLRAGGEKPAGETRRRRMKAPTLAELTIEDEELRRLRRNGMYLRERINVP 248

Query: 505  KAGVTQAITEKIHDAWRKSEIVRLKFHEDLVHDMKTAHELVESRTGGLVIWRSGSVMVVY 684
            KAG+TQ +  KIHD WRK E+VRLKFHE L  DMKTAHE+VE RTGGLVIWR+GSVMVVY
Sbjct: 249  KAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVERRTGGLVIWRAGSVMVVY 308

Query: 685  RGSNYKRPSRTQLPDVQNNQTLVSNETESLFIPDVSETTTLVENVDHSVTSKPVTSSSFD 864
            RGSNY  PS    P        +  + ++LF+P VS T           +  PV      
Sbjct: 309  RGSNYAGPSSKPQP--------IDGDGDTLFVPHVSSTDGSTARSVDEKSEVPVRI---- 356

Query: 865  LNLKHEKNLAEEEVEFNRLLDGLGPRFVDWWGTGILPVDADLLPQNIPGFRTPFRLLPSG 1044
              L H K + EEE E N LLD LGPRF +WWGTGILPVDADLLP  + G++TPFRLLP+G
Sbjct: 357  --LDHSKPMTEEEAECNSLLDSLGPRFQEWWGTGILPVDADLLPPKVDGYKTPFRLLPTG 414

Query: 1045 MRARLTNSEMTNLRKLAKRLPCHFALGRNRHHHGLADAILKIWEKSLVVKIAVKRGVQNT 1224
            MR+RLTN+EMT+LR+LA+ LPCHFALGRNR+H GLA AILK+WEKSLV KIAVKRG+QNT
Sbjct: 415  MRSRLTNAEMTDLRRLARSLPCHFALGRNRNHQGLAVAILKLWEKSLVAKIAVKRGIQNT 474

Query: 1225 NNKLMAEELKALIGGTLLLRNKYYIVIYRGKDFIPASVATALAEREELTKEIQDAEEQLR 1404
            NNKLMAEELK+L GGTLL RNK+YIV+YRGKDF+P +VA+ALAERE+  K+IQD EE++R
Sbjct: 475  NNKLMAEELKSLTGGTLLQRNKFYIVLYRGKDFLPPNVASALAEREQCAKQIQDVEEKVR 534

Query: 1405 KRTIGEPSVNAPEGDAPVGTLAEFLEAQARWGRQISTEERDAMKEEASRYKTTKLFKRVE 1584
             +T+        EG AP GTLAEF EAQ RWGR++S EER+ M EEAS+ K  +L KR+E
Sbjct: 535  SKTLEATPSGETEGQAPAGTLAEFYEAQKRWGREVSAEEREKMVEEASKAKHGRLVKRIE 594

Query: 1585 HKLSIAQAKKARAEQLLTKIEASMVPVNPCEDQETITDEERSVFRRIGLRMKAYLPLGIR 1764
            HKL+++QAKK RAE+LL KIEASMVP  P  DQETITDEER++FRR+GLRMKA+LPLGIR
Sbjct: 595  HKLAVSQAKKLRAERLLAKIEASMVPSGPDYDQETITDEERAMFRRVGLRMKAFLPLGIR 654

Query: 1765 GVFDGVIENMHLHWKHRELVKLISKQKTLAFVESTARLLEYESGGILVAIEPVPKGYALI 1944
            GVFDGV+ENMHLHWK+RELVKLI+KQKTLA+VE TARLLEYES GIL+AIE VPKG+ALI
Sbjct: 655  GVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESVGILIAIERVPKGFALI 714

Query: 1945 YYRGKNYQRPISLRPRNLLTKAKALKRAIAIQRHEALSQHIVELEKNIEVMKEEL 2109
            +YRGKNY+RPISLRPRNLLTKAKALKR++A+QRHEALSQHI +LE  IE MK+E+
Sbjct: 715  FYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHEALSQHISDLENTIEQMKKEI 769