BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00003590
         (1240 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD16204.1| putative cockayne syndrome 1 homolog [Oryza sati...   473   e-131
ref|XP_003564656.1| PREDICTED: DNA excision repair protein ERCC-...   466   e-129
dbj|BAJ96940.1| predicted protein [Hordeum vulgare subsp. vulgare]    466   e-129
ref|XP_004970639.1| PREDICTED: DNA excision repair protein ERCC-...   461   e-127
ref|XP_002456663.1| hypothetical protein SORBIDRAFT_03g040420 [S...   461   e-127
ref|NP_001143128.1| uncharacterized protein LOC100275606 [Zea ma...   460   e-127
ref|XP_004970640.1| PREDICTED: DNA excision repair protein ERCC-...   460   e-127
ref|XP_003564655.1| PREDICTED: DNA excision repair protein ERCC-...   459   e-127
emb|CBI19401.3| unnamed protein product [Vitis vinifera]              457   e-126
ref|XP_004970641.1| PREDICTED: DNA excision repair protein ERCC-...   455   e-125
ref|XP_002285324.1| PREDICTED: DNA excision repair protein ERCC-...   446   e-123
gb|EOY15717.1| Transducin/WD40 repeat-like superfamily protein i...   438   e-120
ref|XP_002510095.1| WD-repeat protein, putative [Ricinus communi...   437   e-120
ref|XP_004290970.1| PREDICTED: DNA excision repair protein ERCC-...   436   e-119
ref|XP_006851542.1| hypothetical protein AMTR_s00040p00175180 [A...   434   e-119
gb|EOY15718.1| Transducin/WD40 repeat-like superfamily protein i...   433   e-119
ref|XP_004142893.1| PREDICTED: DNA excision repair protein ERCC-...   433   e-119
ref|XP_006434786.1| hypothetical protein CICLE_v10001152mg [Citr...   433   e-119
ref|XP_006473339.1| PREDICTED: DNA excision repair protein ERCC-...   431   e-118
ref|XP_006473337.1| PREDICTED: DNA excision repair protein ERCC-...   431   e-118

>dbj|BAD16204.1| putative cockayne syndrome 1 homolog [Oryza sativa Japonica Group]
            gi|48716894|dbj|BAD23590.1| putative cockayne syndrome 1
            homolog [Oryza sativa Japonica Group]
          Length = 453

 Score =  473 bits (1217), Expect = e-131
 Identities = 229/384 (59%), Positives = 280/384 (72%)
 Frame = +3

Query: 3    YDIQQATEYEKGLIAKHKSLFVVDKQHGYGHKFAISTVIWYPVDTGLFVTGSFDHYVKVW 182
            +D+Q A EYE G IAKH+S+ +VDKQH  GHKFA+S  +WYPVDTGLFVT SFD YVKVW
Sbjct: 72   FDVQNAIEYEAGFIAKHRSILLVDKQHENGHKFAVSMAVWYPVDTGLFVTASFDQYVKVW 131

Query: 183  DTNMAQVVMDFKMPGKVYGTAMSSVAKAHMLIAAGSADVQVRLCDIASGAFTHTLSGHRG 362
            DTN  QVVMDFKMPGKVY  AMS +A  HMLIA GSADVQVRLCDIASGAFTHTLSGHR 
Sbjct: 132  DTNSTQVVMDFKMPGKVYSAAMSPIATTHMLIATGSADVQVRLCDIASGAFTHTLSGHRD 191

Query: 363  GIMNVEWSTSSEWILMTGGCDGAIRFWDIRRAGCFRILDQSQSQFGXXXXXXXXXXXXXX 542
            GIM++EWSTSSEWILM+GGCDGAIRFWDIRRAGCF +LDQS+SQ G              
Sbjct: 192  GIMSLEWSTSSEWILMSGGCDGAIRFWDIRRAGCFLVLDQSRSQLGRRPPFLEGTSDKDP 251

Query: 543  XRTAAAGSSSVNKLISKKKATLGNGKKQSQAVCKLQNLTTSHTMHKSHPGTASSYSRATA 722
              +    SSS  K+ S ++ T G  KKQS  + K Q     H   + HPG +SS +RATA
Sbjct: 252  LNSLQPSSSS--KIYSAQQRT-GKSKKQSHKLHKSQIPGHGHIQQRLHPGLSSSQNRATA 308

Query: 723  HFGAVTGLRATXXXXXXXXXXXXXXXXXWDIESGCSISVNFEATRLQTNKAIQLALSQDS 902
            H+GAVTGLR T                 WDI+SGC+  VNFEA RLQT+K +QLA+++D 
Sbjct: 309  HYGAVTGLRTTTDGMYLLSSGSDSRLRLWDIDSGCNTLVNFEAMRLQTSKPLQLAVTEDP 368

Query: 903  SAVFIPSMSNVKVYDVLSGLNLQTFYGHYDMVNCCYFNMQDQELYTGSNDRHILVWSPPS 1082
            S VFIP M+++K Y++ SG+  QTF GHY+ VNCCY++ Q+QELYTGSNDR ILVWSP +
Sbjct: 369  SLVFIPCMASIKAYNLWSGMTFQTFRGHYEPVNCCYYSAQEQELYTGSNDRQILVWSPST 428

Query: 1083 SSFSDMDEEERKRLNLKADEDNWS 1154
             +F++M+++ +++++   DEDNWS
Sbjct: 429  PAFTEMEDDGKRQMDFVVDEDNWS 452


>ref|XP_003564656.1| PREDICTED: DNA excision repair protein ERCC-8-like isoform 2
            [Brachypodium distachyon]
          Length = 452

 Score =  466 bits (1200), Expect = e-129
 Identities = 225/384 (58%), Positives = 276/384 (71%)
 Frame = +3

Query: 3    YDIQQATEYEKGLIAKHKSLFVVDKQHGYGHKFAISTVIWYPVDTGLFVTGSFDHYVKVW 182
            +D++ ATEYE G IAKH+S+ +VD+QH +GHKF +S  IWYPVDTGLFVT SFD YVKVW
Sbjct: 72   FDVKNATEYEAGFIAKHRSILLVDRQHEHGHKFVVSKAIWYPVDTGLFVTASFDTYVKVW 131

Query: 183  DTNMAQVVMDFKMPGKVYGTAMSSVAKAHMLIAAGSADVQVRLCDIASGAFTHTLSGHRG 362
            DTN  QVVMDFKMPGKVY  AMS +A  HMLIA GSADVQVRLCDIASGAFTHTLSGH  
Sbjct: 132  DTNSTQVVMDFKMPGKVYSAAMSPIATTHMLIATGSADVQVRLCDIASGAFTHTLSGHHD 191

Query: 363  GIMNVEWSTSSEWILMTGGCDGAIRFWDIRRAGCFRILDQSQSQFGXXXXXXXXXXXXXX 542
            GIM++EWSTSSEWILM+GGCDGAIRFWDIRRAGCF  LDQS+SQ G              
Sbjct: 192  GIMSLEWSTSSEWILMSGGCDGAIRFWDIRRAGCFLALDQSRSQLG-RRPPFLDRTIEDH 250

Query: 543  XRTAAAGSSSVNKLISKKKATLGNGKKQSQAVCKLQNLTTSHTMHKSHPGTASSYSRATA 722
              T    +SS N  + ++    GN KKQS+ + + Q  T  H   + HPG +SS +R  A
Sbjct: 251  KNTLGPSTSSKNYSVQQR---TGNRKKQSKTLHRSQTPTRGHVQQRVHPGMSSSQNRTIA 307

Query: 723  HFGAVTGLRATXXXXXXXXXXXXXXXXXWDIESGCSISVNFEATRLQTNKAIQLALSQDS 902
            H+GA+TGL+ T                 WDI+SGC+  VNFEATRLQT+K +QLA+++D 
Sbjct: 308  HYGAITGLKTTTDGMHLLSSGSDSRLKLWDIDSGCNTLVNFEATRLQTSKPLQLAVTEDP 367

Query: 903  SAVFIPSMSNVKVYDVLSGLNLQTFYGHYDMVNCCYFNMQDQELYTGSNDRHILVWSPPS 1082
            S VF+P M+++K Y++ SG   QTF GHYD VNCCY++ QDQELYTGSNDR ILVWSP +
Sbjct: 368  SLVFVPCMASIKAYNIWSGTMFQTFRGHYDDVNCCYYSSQDQELYTGSNDRQILVWSPST 427

Query: 1083 SSFSDMDEEERKRLNLKADEDNWS 1154
             +F++M+++E+ +    AD DNWS
Sbjct: 428  PAFTEMEDDEKPQGFFAADVDNWS 451


>dbj|BAJ96940.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 452

 Score =  466 bits (1200), Expect = e-129
 Identities = 228/384 (59%), Positives = 275/384 (71%)
 Frame = +3

Query: 3    YDIQQATEYEKGLIAKHKSLFVVDKQHGYGHKFAISTVIWYPVDTGLFVTGSFDHYVKVW 182
            +D++ ATEYE G IAKH+S+ +VD+QH +GHKF +S  IWYPVDTGLFVT SFD+YVKVW
Sbjct: 72   FDLKDATEYEAGFIAKHRSILLVDRQHEHGHKFTVSKAIWYPVDTGLFVTASFDNYVKVW 131

Query: 183  DTNMAQVVMDFKMPGKVYGTAMSSVAKAHMLIAAGSADVQVRLCDIASGAFTHTLSGHRG 362
            DTN  QVVMDFKMPGKVY  AMS +A  HMLIA GSADVQVRLCDIASGAFTHTLSGH  
Sbjct: 132  DTNSTQVVMDFKMPGKVYSAAMSPIATTHMLIATGSADVQVRLCDIASGAFTHTLSGHHD 191

Query: 363  GIMNVEWSTSSEWILMTGGCDGAIRFWDIRRAGCFRILDQSQSQFGXXXXXXXXXXXXXX 542
            GIM++EWSTSSEWIL++GG DGAIRFWDIRRAGCF +LDQ +SQ G              
Sbjct: 192  GIMSLEWSTSSEWILISGGFDGAIRFWDIRRAGCFLVLDQLRSQLGRRPPVLDTTMDNDQ 251

Query: 543  XRTAAAGSSSVNKLISKKKATLGNGKKQSQAVCKLQNLTTSHTMHKSHPGTASSYSRATA 722
             +    G SS +K  S ++ T  N KKQS+A+ K   +   HT  K HPG +SS +  TA
Sbjct: 252  KK---LGRSSSSKSYSVQQRT-ANRKKQSKALHKSLTMVRGHTQQKMHPGMSSSQNHKTA 307

Query: 723  HFGAVTGLRATXXXXXXXXXXXXXXXXXWDIESGCSISVNFEATRLQTNKAIQLALSQDS 902
            H+GAVTGLR T                 WDI+SGC+  VNFEA RLQT+K +QLA++ D 
Sbjct: 308  HYGAVTGLRTTTDGMHLLSSGSDSRLRLWDIDSGCNTLVNFEAMRLQTSKPLQLAVTDDP 367

Query: 903  SAVFIPSMSNVKVYDVLSGLNLQTFYGHYDMVNCCYFNMQDQELYTGSNDRHILVWSPPS 1082
            S VFIP MS++K Y+  SG   QTF GHYD VNCCY+N QDQELYTGSNDR ILVWSP +
Sbjct: 368  SLVFIPCMSSIKAYNTWSGTTFQTFRGHYDHVNCCYYNSQDQELYTGSNDRQILVWSPST 427

Query: 1083 SSFSDMDEEERKRLNLKADEDNWS 1154
               ++M+++++++    ADEDNWS
Sbjct: 428  PVLTEMEDDDKRQEGFAADEDNWS 451


>ref|XP_004970639.1| PREDICTED: DNA excision repair protein ERCC-8-like isoform X1
            [Setaria italica]
          Length = 452

 Score =  461 bits (1187), Expect = e-127
 Identities = 223/384 (58%), Positives = 272/384 (70%)
 Frame = +3

Query: 3    YDIQQATEYEKGLIAKHKSLFVVDKQHGYGHKFAISTVIWYPVDTGLFVTGSFDHYVKVW 182
            +D+  AT+ E G IAKHK + +VDKQH  GHKFAIS  +WYPVDTGLFVT SFD YVKVW
Sbjct: 72   FDVLNATDCEAGFIAKHKHILLVDKQHQNGHKFAISAAVWYPVDTGLFVTASFDQYVKVW 131

Query: 183  DTNMAQVVMDFKMPGKVYGTAMSSVAKAHMLIAAGSADVQVRLCDIASGAFTHTLSGHRG 362
            DTN  QVVMDFKMPGKV+  AMS +A   MLIA GSADVQVRLCDIASGAFTHTLSGHR 
Sbjct: 132  DTNSTQVVMDFKMPGKVFTAAMSPIATTQMLIATGSADVQVRLCDIASGAFTHTLSGHRD 191

Query: 363  GIMNVEWSTSSEWILMTGGCDGAIRFWDIRRAGCFRILDQSQSQFGXXXXXXXXXXXXXX 542
            GIM++EWS SSEWILM+GGCDGAIRFWDIRRAGCFR+LDQSQSQ G              
Sbjct: 192  GIMSLEWSASSEWILMSGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKSTPENQD 251

Query: 543  XRTAAAGSSSVNKLISKKKATLGNGKKQSQAVCKLQNLTTSHTMHKSHPGTASSYSRATA 722
               +   S+S      K+        K S  + K QNLT  H   + HPG +SS +RAT+
Sbjct: 252  HIDSLGHSTSTRSSAQKRT----RNSKNSPKLRKSQNLTQGHMQQRLHPGLSSSQNRATS 307

Query: 723  HFGAVTGLRATXXXXXXXXXXXXXXXXXWDIESGCSISVNFEATRLQTNKAIQLALSQDS 902
            H+GAVTGLR T                 WDI+SGC+  VNFEA RLQT K +QLA+++D 
Sbjct: 308  HYGAVTGLRTTKDGMYLLSSGSDSRLRLWDIDSGCNTLVNFEAMRLQTGKPLQLAVTEDP 367

Query: 903  SAVFIPSMSNVKVYDVLSGLNLQTFYGHYDMVNCCYFNMQDQELYTGSNDRHILVWSPPS 1082
            S VF+P M+++K Y++ SG+  + F GHY++VNCCY++ QDQELYTGSNDR ILVWSP +
Sbjct: 368  SLVFVPCMASIKAYNLWSGMTFRAFRGHYELVNCCYYSEQDQELYTGSNDRQILVWSPST 427

Query: 1083 SSFSDMDEEERKRLNLKADEDNWS 1154
             +F++M+++E+++    ADEDNWS
Sbjct: 428  PAFTEMEDDEKRQGLSAADEDNWS 451


>ref|XP_002456663.1| hypothetical protein SORBIDRAFT_03g040420 [Sorghum bicolor]
            gi|241928638|gb|EES01783.1| hypothetical protein
            SORBIDRAFT_03g040420 [Sorghum bicolor]
          Length = 450

 Score =  461 bits (1186), Expect = e-127
 Identities = 223/384 (58%), Positives = 278/384 (72%)
 Frame = +3

Query: 3    YDIQQATEYEKGLIAKHKSLFVVDKQHGYGHKFAISTVIWYPVDTGLFVTGSFDHYVKVW 182
            +D+  ATEYE G IAKH+++ +VDKQH  GH+FA+S  +WYPVDTGLFVT SFD YVKVW
Sbjct: 72   FDVWNATEYEAGFIAKHRNILLVDKQHQNGHRFAVSAAVWYPVDTGLFVTASFDQYVKVW 131

Query: 183  DTNMAQVVMDFKMPGKVYGTAMSSVAKAHMLIAAGSADVQVRLCDIASGAFTHTLSGHRG 362
            DTN  QVVM+FKMPGKVY  AMS VA  HMLI  G+ADVQVRLCDIASGAFTHTLSGHR 
Sbjct: 132  DTNSTQVVMEFKMPGKVYTAAMSPVATTHMLIGTGTADVQVRLCDIASGAFTHTLSGHRD 191

Query: 363  GIMNVEWSTSSEWILMTGGCDGAIRFWDIRRAGCFRILDQSQSQFGXXXXXXXXXXXXXX 542
            GIM++EWS SSEWILM+GGCDGAIRFWDIRRAGCF++LDQS+SQ G              
Sbjct: 192  GIMSLEWSASSEWILMSGGCDGAIRFWDIRRAGCFQVLDQSRSQLG--KRPPLVKSAVDN 249

Query: 543  XRTAAAGSSSVNKLISKKKATLGNGKKQSQAVCKLQNLTTSHTMHKSHPGTASSYSRATA 722
              T + G S   + +++K+A  G  KK S A+ K+QNLT      + HPG +SS +RATA
Sbjct: 250  DHTDSLGPSPSTRSLAQKRA--GISKKSSPALRKIQNLTHGQMQQRLHPGLSSSQNRATA 307

Query: 723  HFGAVTGLRATXXXXXXXXXXXXXXXXXWDIESGCSISVNFEATRLQTNKAIQLALSQDS 902
            H+GAVTGLR T                 WDI+SGC+  VNFEA RLQT K +QLA+++D 
Sbjct: 308  HYGAVTGLRTTTDGMYLLSSGSDSRLRLWDIDSGCNTLVNFEAMRLQTGKPLQLAVTKDP 367

Query: 903  SAVFIPSMSNVKVYDVLSGLNLQTFYGHYDMVNCCYFNMQDQELYTGSNDRHILVWSPPS 1082
            S VF+P M+++K Y++ SG   +TF GHY++VNCCY++ QDQELYTG NDR ILVW+P +
Sbjct: 368  SLVFVPCMASIKAYNLWSGTTFRTFRGHYELVNCCYYSEQDQELYTGGNDRQILVWTPST 427

Query: 1083 SSFSDMDEEERKRLNLKADEDNWS 1154
             +F++M++ ++      ADEDNWS
Sbjct: 428  PAFTEMEDHDKTLSG--ADEDNWS 449


>ref|NP_001143128.1| uncharacterized protein LOC100275606 [Zea mays]
            gi|195614758|gb|ACG29209.1| hypothetical protein [Zea
            mays]
          Length = 466

 Score =  460 bits (1184), Expect = e-127
 Identities = 228/397 (57%), Positives = 278/397 (70%), Gaps = 13/397 (3%)
 Frame = +3

Query: 3    YDIQQATEYEKGLIAKHKSLFVVDKQHGYGHKFAISTVIWYPVDTGLFVTGSFDHYVKVW 182
            +D+  ATEYE G IAKH+++ +VDKQH  GHKFAIS  +WYPVDTGLFVT SFD +VKVW
Sbjct: 72   FDVWNATEYETGFIAKHRNILLVDKQHQNGHKFAISAAVWYPVDTGLFVTASFDQFVKVW 131

Query: 183  DTNMAQVVMDFKMPGKVYGTAMSSVAKAHMLIAAGSADVQVRLCDIASGAFTHTLSGHRG 362
            DTN  QVVM+FKMPGKVY  AMS +A  H+LIA GSADVQVRLCDIASGAFTHTLSGHR 
Sbjct: 132  DTNSTQVVMEFKMPGKVYTAAMSPIATTHVLIATGSADVQVRLCDIASGAFTHTLSGHRD 191

Query: 363  GIMNVEWSTSSEWILMTGGCDGAIRFWDIRRAGCFRILDQSQSQFGXXXXXXXXXXXXXX 542
            GIM++EWS SSEWILM+GGCDGAIRFWDIRRAGCFR+LDQS+SQ G              
Sbjct: 192  GIMSLEWSASSEWILMSGGCDGAIRFWDIRRAGCFRVLDQSRSQLGKRPLVKSALYKPNC 251

Query: 543  XRTAAAGS-------------SSVNKLISKKKATLGNGKKQSQAVCKLQNLTTSHTMHKS 683
                  GS              S+    S ++ T G  KK S A+ K+QN T  H   + 
Sbjct: 252  PNIRKFGSIRIRTQNCIQDHTDSLGPSPSARRRT-GISKKSSSALRKIQNPTHGHMQQRL 310

Query: 684  HPGTASSYSRATAHFGAVTGLRATXXXXXXXXXXXXXXXXXWDIESGCSISVNFEATRLQ 863
            HPG +SS +RATAH+GAVTGLR T                 WDI+SGC+  VNFEA RLQ
Sbjct: 311  HPGLSSSQNRATAHYGAVTGLRTTADGMYLLSSGSDSRLRLWDIDSGCNTLVNFEAMRLQ 370

Query: 864  TNKAIQLALSQDSSAVFIPSMSNVKVYDVLSGLNLQTFYGHYDMVNCCYFNMQDQELYTG 1043
            T K +QLA+++D S VF+P M+++K Y++ SG   QTF GHY++VNCCY++ QDQELYTG
Sbjct: 371  TGKPLQLAVTEDPSLVFVPCMASIKAYNLWSGKTFQTFRGHYELVNCCYYSEQDQELYTG 430

Query: 1044 SNDRHILVWSPPSSSFSDMDEEERKRLNLKADEDNWS 1154
            SNDR ILVWSP + +F+ M++++  ++   ADEDNWS
Sbjct: 431  SNDRQILVWSPSTPAFTKMEDDD--KILSAADEDNWS 465


>ref|XP_004970640.1| PREDICTED: DNA excision repair protein ERCC-8-like isoform X2
            [Setaria italica]
          Length = 451

 Score =  460 bits (1183), Expect = e-127
 Identities = 223/384 (58%), Positives = 275/384 (71%)
 Frame = +3

Query: 3    YDIQQATEYEKGLIAKHKSLFVVDKQHGYGHKFAISTVIWYPVDTGLFVTGSFDHYVKVW 182
            +D+  AT+ E G IAKHK + +VDKQH  GHKFAIS  +WYPVDTGLFVT SFD YVKVW
Sbjct: 72   FDVLNATDCEAGFIAKHKHILLVDKQHQNGHKFAISAAVWYPVDTGLFVTASFDQYVKVW 131

Query: 183  DTNMAQVVMDFKMPGKVYGTAMSSVAKAHMLIAAGSADVQVRLCDIASGAFTHTLSGHRG 362
            DTN  QVVMDFKMPGKV+  AMS +A   MLIA GSADVQVRLCDIASGAFTHTLSGHR 
Sbjct: 132  DTNSTQVVMDFKMPGKVFTAAMSPIATTQMLIATGSADVQVRLCDIASGAFTHTLSGHRD 191

Query: 363  GIMNVEWSTSSEWILMTGGCDGAIRFWDIRRAGCFRILDQSQSQFGXXXXXXXXXXXXXX 542
            GIM++EWS SSEWILM+GGCDGAIRFWDIRRAGCFR+LDQSQSQ G              
Sbjct: 192  GIMSLEWSASSEWILMSGGCDGAIRFWDIRRAGCFRVLDQSQSQLG--RRPPLLKSTPEN 249

Query: 543  XRTAAAGSSSVNKLISKKKATLGNGKKQSQAVCKLQNLTTSHTMHKSHPGTASSYSRATA 722
                + G S+  +  ++K+       K S  + K QNLT  H   + HPG +SS +RAT+
Sbjct: 250  DHIDSLGHSTSTRSSAQKRT---RNSKNSPKLRKSQNLTQGHMQQRLHPGLSSSQNRATS 306

Query: 723  HFGAVTGLRATXXXXXXXXXXXXXXXXXWDIESGCSISVNFEATRLQTNKAIQLALSQDS 902
            H+GAVTGLR T                 WDI+SGC+  VNFEA RLQT K +QLA+++D 
Sbjct: 307  HYGAVTGLRTTKDGMYLLSSGSDSRLRLWDIDSGCNTLVNFEAMRLQTGKPLQLAVTEDP 366

Query: 903  SAVFIPSMSNVKVYDVLSGLNLQTFYGHYDMVNCCYFNMQDQELYTGSNDRHILVWSPPS 1082
            S VF+P M+++K Y++ SG+  + F GHY++VNCCY++ QDQELYTGSNDR ILVWSP +
Sbjct: 367  SLVFVPCMASIKAYNLWSGMTFRAFRGHYELVNCCYYSEQDQELYTGSNDRQILVWSPST 426

Query: 1083 SSFSDMDEEERKRLNLKADEDNWS 1154
             +F++M+++E+++    ADEDNWS
Sbjct: 427  PAFTEMEDDEKRQGLSAADEDNWS 450


>ref|XP_003564655.1| PREDICTED: DNA excision repair protein ERCC-8-like isoform 1
            [Brachypodium distachyon]
          Length = 474

 Score =  459 bits (1182), Expect = e-127
 Identities = 226/403 (56%), Positives = 279/403 (69%), Gaps = 19/403 (4%)
 Frame = +3

Query: 3    YDIQQATEYEKGLIAKHKSLFVVDKQHGYGHKFAISTVIWYPVDTGLFVTGSFDHYVKVW 182
            +D++ ATEYE G IAKH+S+ +VD+QH +GHKF +S  IWYPVDTGLFVT SFD YVKVW
Sbjct: 72   FDVKNATEYEAGFIAKHRSILLVDRQHEHGHKFVVSKAIWYPVDTGLFVTASFDTYVKVW 131

Query: 183  DTNMAQVVMDFKMPGKVYGTAMSSVAKAHMLIAAGSADVQVRLCDIASGAFTHTLSGHRG 362
            DTN  QVVMDFKMPGKVY  AMS +A  HMLIA GSADVQVRLCDIASGAFTHTLSGH  
Sbjct: 132  DTNSTQVVMDFKMPGKVYSAAMSPIATTHMLIATGSADVQVRLCDIASGAFTHTLSGHHD 191

Query: 363  GIMNVEWSTSSEWILMTGGCDGAIRFWDIRRAGCFRILDQSQSQFGXXXXXXXXXXXXXX 542
            GIM++EWSTSSEWILM+GGCDGAIRFWDIRRAGCF  LDQS+SQ G              
Sbjct: 192  GIMSLEWSTSSEWILMSGGCDGAIRFWDIRRAGCFLALDQSRSQLGRRPPFLDRTIEVCL 251

Query: 543  XRTAAA-------------------GSSSVNKLISKKKATLGNGKKQSQAVCKLQNLTTS 665
                ++                   G S+ +K  S ++ T GN KKQS+ + + Q  T  
Sbjct: 252  LLPISSDFLLTVLTQDCLQDHKNTLGPSTSSKNYSVQQRT-GNRKKQSKTLHRSQTPTRG 310

Query: 666  HTMHKSHPGTASSYSRATAHFGAVTGLRATXXXXXXXXXXXXXXXXXWDIESGCSISVNF 845
            H   + HPG +SS +R  AH+GA+TGL+ T                 WDI+SGC+  VNF
Sbjct: 311  HVQQRVHPGMSSSQNRTIAHYGAITGLKTTTDGMHLLSSGSDSRLKLWDIDSGCNTLVNF 370

Query: 846  EATRLQTNKAIQLALSQDSSAVFIPSMSNVKVYDVLSGLNLQTFYGHYDMVNCCYFNMQD 1025
            EATRLQT+K +QLA+++D S VF+P M+++K Y++ SG   QTF GHYD VNCCY++ QD
Sbjct: 371  EATRLQTSKPLQLAVTEDPSLVFVPCMASIKAYNIWSGTMFQTFRGHYDDVNCCYYSSQD 430

Query: 1026 QELYTGSNDRHILVWSPPSSSFSDMDEEERKRLNLKADEDNWS 1154
            QELYTGSNDR ILVWSP + +F++M+++E+ +    AD DNWS
Sbjct: 431  QELYTGSNDRQILVWSPSTPAFTEMEDDEKPQGFFAADVDNWS 473


>emb|CBI19401.3| unnamed protein product [Vitis vinifera]
          Length = 458

 Score =  457 bits (1177), Expect = e-126
 Identities = 226/388 (58%), Positives = 273/388 (70%), Gaps = 4/388 (1%)
 Frame = +3

Query: 3    YDIQQATEYEKG-LIAKHKSLFVVDKQHGYGHKFAISTVIWYPVDTGLFVTGSFDHYVKV 179
            YDIQ+ATEYE G L+AKHKS+FVVDKQH +GHK+AIS+ IWYP+DTGLF+TGS+DHY+ V
Sbjct: 71   YDIQRATEYEGGSLVAKHKSIFVVDKQHEHGHKYAISSAIWYPIDTGLFITGSYDHYINV 130

Query: 180  WDTNMAQVVMDFKMPGKVYGTAMSSVAKAHMLIAAGSADVQVRLCDIASGAFTHTLSGHR 359
            WDTN  QVV++FKMPGK+Y TAMSS+A AHMLIAAG+ DVQVRLCDIASGAF HTLSGHR
Sbjct: 131  WDTNTTQVVVNFKMPGKIYRTAMSSLATAHMLIAAGTEDVQVRLCDIASGAFAHTLSGHR 190

Query: 360  GGIMNVEWSTSSEWILMTGGCDGAIRFWDIRRAGCFRILDQSQSQFGXXXXXXXXXXXXX 539
             G+M VEWSTSSEW+L+TGGCDGAIRFWDIRRAGCF +LDQSQSQ G             
Sbjct: 191  DGVMTVEWSTSSEWVLVTGGCDGAIRFWDIRRAGCFLVLDQSQSQLGRRPPLLECSTANK 250

Query: 540  XXRT---AAAGSSSVNKLISKKKATLGNGKKQSQAVCKLQNLTTSHTMHKSHPGTASSYS 710
               +    A+ S +V     ++K   GNG KQS A  +  +        + HPG  SS  
Sbjct: 251  APMSKSFPASQSVNVRSRAPQRKFAYGNGSKQS-ATGRTSSQAKGLVRQRLHPGMLSSQD 309

Query: 711  RATAHFGAVTGLRATXXXXXXXXXXXXXXXXXWDIESGCSISVNFEATRLQTNKAIQLAL 890
            RAT+H+GAVTGL+ T                 WDI SGC+  VNFE  RLQT+KA+QLA+
Sbjct: 310  RATSHYGAVTGLKVTDDGMYLLSAGSDSRLRLWDIMSGCNTLVNFETVRLQTSKAMQLAI 369

Query: 891  SQDSSAVFIPSMSNVKVYDVLSGLNLQTFYGHYDMVNCCYFNMQDQELYTGSNDRHILVW 1070
            + DS+ VF+P M+ VK +DV SG    TF GHY+ VNCC+ ++QDQELYTG NDR ILVW
Sbjct: 370  TNDSALVFVPCMTAVKAFDVWSGKTAMTFRGHYEYVNCCWLSLQDQELYTGGNDRQILVW 429

Query: 1071 SPPSSSFSDMDEEERKRLNLKADEDNWS 1154
            SP   +F +MD   R+      D+DNWS
Sbjct: 430  SPSRLNFDEMDHGSREEPIHAQDQDNWS 457


>ref|XP_004970641.1| PREDICTED: DNA excision repair protein ERCC-8-like isoform X3
            [Setaria italica]
          Length = 456

 Score =  455 bits (1171), Expect = e-125
 Identities = 224/389 (57%), Positives = 276/389 (70%), Gaps = 5/389 (1%)
 Frame = +3

Query: 3    YDIQQATEYEKGLIAKHKSLFVVDKQHGYGHKFAISTVIWYPVDTGLFVTGSFDHYVKVW 182
            +D+  AT+ E G IAKHK + +VDKQH  GHKFAIS  +WYPVDTGLFVT SFD YVKVW
Sbjct: 72   FDVLNATDCEAGFIAKHKHILLVDKQHQNGHKFAISAAVWYPVDTGLFVTASFDQYVKVW 131

Query: 183  DTNMAQVVMDFKMPGKVYGTAMSSVAKAHMLIAAGSADVQVRLCDIASGAFTHTLSGHRG 362
            DTN  QVVMDFKMPGKV+  AMS +A   MLIA GSADVQVRLCDIASGAFTHTLSGHR 
Sbjct: 132  DTNSTQVVMDFKMPGKVFTAAMSPIATTQMLIATGSADVQVRLCDIASGAFTHTLSGHRD 191

Query: 363  GIMNVEWSTSSEWILMTGGCDGAIRFWDIRRAGCFRILDQSQSQFGXXXXXXXXXXXXXX 542
            GIM++EWS SSEWILM+GGCDGAIRFWDIRRAGCFR+LDQSQSQ G              
Sbjct: 192  GIMSLEWSASSEWILMSGGCDGAIRFWDIRRAGCFRVLDQSQSQLG--RRPPLLKSTPEN 249

Query: 543  XRTAAAGSSSVNKLISKKKATLGNGKKQSQAVCKLQNLTTSHTMHKSHPGTASSYSRATA 722
                + G S+  +  ++K+       K S  + K QNLT  H   + HPG +SS +RAT+
Sbjct: 250  DHIDSLGHSTSTRSSAQKRT---RNSKNSPKLRKSQNLTQGHMQQRLHPGLSSSQNRATS 306

Query: 723  HFGAVTGLRATXXXXXXXXXXXXXXXXXWDIESGCSISVNFEATRLQTNKAIQLALSQDS 902
            H+GAVTGLR T                 WDI+SGC+  VNFEA RLQT K +QLA+++D 
Sbjct: 307  HYGAVTGLRTTKDGMYLLSSGSDSRLRLWDIDSGCNTLVNFEAMRLQTGKPLQLAVTEDP 366

Query: 903  SAVFIPSMSNVKV-----YDVLSGLNLQTFYGHYDMVNCCYFNMQDQELYTGSNDRHILV 1067
            S VF+P M+++KV     Y++ SG+  + F GHY++VNCCY++ QDQELYTGSNDR ILV
Sbjct: 367  SLVFVPCMASIKVRLLSAYNLWSGMTFRAFRGHYELVNCCYYSEQDQELYTGSNDRQILV 426

Query: 1068 WSPPSSSFSDMDEEERKRLNLKADEDNWS 1154
            WSP + +F++M+++E+++    ADEDNWS
Sbjct: 427  WSPSTPAFTEMEDDEKRQGLSAADEDNWS 455


>ref|XP_002285324.1| PREDICTED: DNA excision repair protein ERCC-8-like [Vitis vinifera]
          Length = 450

 Score =  446 bits (1148), Expect = e-123
 Identities = 223/393 (56%), Positives = 270/393 (68%), Gaps = 9/393 (2%)
 Frame = +3

Query: 3    YDIQQATEYEKG-LIAKHKSLFVVDKQHGYGHKFAISTVIWYPVDTGLFVTGSFDHYVKV 179
            YDIQ+ATEYE G L+AKHKS+FVVDKQH +GHK+AIS+ IWYP+DTGLF+TGS+DHY+ V
Sbjct: 71   YDIQRATEYEGGSLVAKHKSIFVVDKQHEHGHKYAISSAIWYPIDTGLFITGSYDHYINV 130

Query: 180  WDTNMAQVVMDFKMPGKVYGTAMSSVAKAHMLIAAGSADVQVRLCDIASGAFTHTLSGHR 359
            WDTN  QVV++FKMPGK+Y TAMSS+A AHMLIAAG+ DVQVRLCDIASGAF HTLSGHR
Sbjct: 131  WDTNTTQVVVNFKMPGKIYRTAMSSLATAHMLIAAGTEDVQVRLCDIASGAFAHTLSGHR 190

Query: 360  GGIMNVEWSTSSEWILMTGGCDGAIRFWDIRRAGCFRILDQSQSQFGXXXXXXXXXXXXX 539
             G+M VEWSTSSEW+L+TGGCDGAIRFWDIRRAGCF +LDQSQSQ G             
Sbjct: 191  DGVMTVEWSTSSEWVLVTGGCDGAIRFWDIRRAGCFLVLDQSQSQLG------------- 237

Query: 540  XXRTAAAGSSSVNKL-ISKKKATLGN-------GKKQSQAVCKLQNLTTSHTMHKSHPGT 695
              R      S+ NK+   K+  ++G          K   A  +  +        + HPG 
Sbjct: 238  -RRPPLLECSTANKVSFLKQNVSMGMEVGLHVLHSKTGSATGRTSSQAKGLVRQRLHPGM 296

Query: 696  ASSYSRATAHFGAVTGLRATXXXXXXXXXXXXXXXXXWDIESGCSISVNFEATRLQTNKA 875
             SS  RAT+H+GAVTGL+ T                 WDI SGC+  VNFE  RLQT+KA
Sbjct: 297  LSSQDRATSHYGAVTGLKVTDDGMYLLSAGSDSRLRLWDIMSGCNTLVNFETVRLQTSKA 356

Query: 876  IQLALSQDSSAVFIPSMSNVKVYDVLSGLNLQTFYGHYDMVNCCYFNMQDQELYTGSNDR 1055
            +QLA++ DS+ VF+P M+ VK +DV SG    TF GHY+ VNCC+ ++QDQELYTG NDR
Sbjct: 357  MQLAITNDSALVFVPCMTAVKAFDVWSGKTAMTFRGHYEYVNCCWLSLQDQELYTGGNDR 416

Query: 1056 HILVWSPPSSSFSDMDEEERKRLNLKADEDNWS 1154
             ILVWSP   +F +MD   R+      D+DNWS
Sbjct: 417  QILVWSPSRLNFDEMDHGSREEPIHAQDQDNWS 449


>gb|EOY15717.1| Transducin/WD40 repeat-like superfamily protein isoform 1 [Theobroma
            cacao]
          Length = 450

 Score =  438 bits (1126), Expect = e-120
 Identities = 229/388 (59%), Positives = 266/388 (68%), Gaps = 4/388 (1%)
 Frame = +3

Query: 3    YDIQQATEYE-KGLIAKHKSLFVVDKQHGYGHKFAISTVIWYPVDTGLFVTGSFDHYVKV 179
            YD+Q+AT YE  GLIAKHK LF VDKQH  GHK+AIS+ IWYPVDTGLFVTGS+DH +KV
Sbjct: 71   YDVQKATNYEGNGLIAKHKCLFSVDKQHEKGHKYAISSAIWYPVDTGLFVTGSYDHCIKV 130

Query: 180  WDTNMAQVVMDFKMPGKVYGTAMSSVAKAHMLIAAGSADVQVRLCDIASGAFTHTLSGHR 359
            WDTN  QVVM+FKMPGKVY TAMS++A +HMLIAAG+ DVQVRLCDI+SGAF HTLSGHR
Sbjct: 131  WDTNTTQVVMNFKMPGKVYRTAMSTLATSHMLIAAGTEDVQVRLCDISSGAFAHTLSGHR 190

Query: 360  GGIMNVEWSTSSEWILMTGGCDGAIRFWDIRRAGCFRILDQSQSQFG---XXXXXXXXXX 530
             GIM  EWSTSSEW+L+TGGCDGAIRFWDIRRAGCF +LDQSQSQ G             
Sbjct: 191  DGIMTAEWSTSSEWVLITGGCDGAIRFWDIRRAGCFLVLDQSQSQLGRRPPVLGRSAANK 250

Query: 531  XXXXXRTAAAGSSSVNKLISKKKATLGNGKKQSQAVCKLQNLTTSHTMHKSHPGTASSYS 710
                  T+A  SS V     +KK   G+G KQS  + ++          + HPG  S   
Sbjct: 251  VSVSKLTSAGPSSLVKSRAPQKKYANGHGIKQS-TIGRMP--AKGSARQRVHPGMLSIQD 307

Query: 711  RATAHFGAVTGLRATXXXXXXXXXXXXXXXXXWDIESGCSISVNFEATRLQTNKAIQLAL 890
            RATAH+GAVTGL+ T                 WD+ESG +  VNFE  RLQT+KAIQLA+
Sbjct: 308  RATAHYGAVTGLKVTEDGMYLLSAGSDSRIKLWDLESGYNTLVNFEMVRLQTSKAIQLAI 367

Query: 891  SQDSSAVFIPSMSNVKVYDVLSGLNLQTFYGHYDMVNCCYFNMQDQELYTGSNDRHILVW 1070
            SQDS+ VF+P M+ VK +DV SG     F GHY+ VNCC+F+ QDQELYTG +DR ILVW
Sbjct: 368  SQDSAHVFVPCMTVVKAFDVWSGKMSLAFRGHYESVNCCWFSSQDQELYTGGSDRQILVW 427

Query: 1071 SPPSSSFSDMDEEERKRLNLKADEDNWS 1154
            SP  S   DMDE   K      D+DNWS
Sbjct: 428  SPHKSISDDMDEGHTK------DQDNWS 449


>ref|XP_002510095.1| WD-repeat protein, putative [Ricinus communis]
            gi|223550796|gb|EEF52282.1| WD-repeat protein, putative
            [Ricinus communis]
          Length = 479

 Score =  437 bits (1125), Expect = e-120
 Identities = 224/388 (57%), Positives = 271/388 (69%), Gaps = 4/388 (1%)
 Frame = +3

Query: 3    YDIQQATEYE-KGLIAKHKSLFVVDKQHGYGHKFAISTVIWYPVDTGLFVTGSFDHYVKV 179
            +D+Q+AT++E +G+IAKHK LF+VDKQH   HK+A+S+  WYPVDTGLFVTGS+DHY+KV
Sbjct: 103  FDVQRATDFEDEGVIAKHKCLFIVDKQHETAHKYAVSSATWYPVDTGLFVTGSYDHYIKV 162

Query: 180  WDTNMAQVVMDFKMPGKVYGTAMSSVAKAHMLIAAGSADVQVRLCDIASGAFTHTLSGHR 359
            WDTN  QVV++FK+PGKVY TAMS +A +HMLIAAG+ DVQVRLCDIASGAF HTLSGHR
Sbjct: 163  WDTNTTQVVVNFKLPGKVYRTAMSPLATSHMLIAAGTEDVQVRLCDIASGAFAHTLSGHR 222

Query: 360  GGIMNVEWSTSSEWILMTGGCDGAIRFWDIRRAGCFRILDQSQSQFG-XXXXXXXXXXXX 536
             G+M VEWSTSSEW+L+TGGCDGAIRFWDIRRAGCFR+LDQSQSQ G             
Sbjct: 223  DGVMTVEWSTSSEWVLVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPVLPRSVANK 282

Query: 537  XXXRTAAAGS--SSVNKLISKKKATLGNGKKQSQAVCKLQNLTTSHTMHKSHPGTASSYS 710
               R+  AG   SS ++   KK AT GNGKKQS      +         + HPG  S   
Sbjct: 283  VSSRSLLAGQHLSSKSRAPLKKSAT-GNGKKQSPLG---RTPVKGPVRQRLHPGMLSIQD 338

Query: 711  RATAHFGAVTGLRATXXXXXXXXXXXXXXXXXWDIESGCSISVNFEATRLQTNKAIQLAL 890
            RATAH+GAVTGL+ T                 WD+ESGC+  VNFE  RLQT+KAIQLA 
Sbjct: 339  RATAHYGAVTGLKITEDGMYLLSAGSDSRMRLWDLESGCNTLVNFETVRLQTSKAIQLAT 398

Query: 891  SQDSSAVFIPSMSNVKVYDVLSGLNLQTFYGHYDMVNCCYFNMQDQELYTGSNDRHILVW 1070
            +QDSS VF+P M+ VK +D+ SG+   TF GHY+ VNCC+++ QDQE+YTG NDR ILVW
Sbjct: 399  TQDSSLVFVPCMTAVKAFDLWSGMTSMTFRGHYEYVNCCWYSSQDQEIYTGGNDRQILVW 458

Query: 1071 SPPSSSFSDMDEEERKRLNLKADEDNWS 1154
             PP     DM+    +      D+DNWS
Sbjct: 459  CPP--RLIDMETGPAE------DQDNWS 478


>ref|XP_004290970.1| PREDICTED: DNA excision repair protein ERCC-8-like [Fragaria vesca
            subsp. vesca]
          Length = 448

 Score =  436 bits (1121), Expect = e-119
 Identities = 226/388 (58%), Positives = 267/388 (68%), Gaps = 4/388 (1%)
 Frame = +3

Query: 3    YDIQQATEYEKG-LIAKHKSLFVVDKQHGYGHKFAISTVIWYPVDTGLFVTGSFDHYVKV 179
            YDIQ+ T+Y+ G  I+KHK++FVVDKQH  GHK+A+S+ +WYPVDTGLFVTGS+DH+V V
Sbjct: 71   YDIQRGTDYDGGGAISKHKAIFVVDKQHENGHKYAVSSAVWYPVDTGLFVTGSYDHHVNV 130

Query: 180  WDTNMAQVVMDFKMPGKVYGTAMSSVAKAHMLIAAGSADVQVRLCDIASGAFTHTLSGHR 359
            WDTN  QVVM+FKMPGKVY TAMSS+A +HMLIAAG+ DVQVRLCDIASGAF HTLSGHR
Sbjct: 131  WDTNTTQVVMNFKMPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDIASGAFAHTLSGHR 190

Query: 360  GGIMNVEWSTSSEWILMTGGCDGAIRFWDIRRAGCFRILDQSQSQFG--XXXXXXXXXXX 533
             G+M VEWSTSSEW+L+TGGCDGAIRFWDIRRAGCF +LDQSQSQ G             
Sbjct: 191  DGVMTVEWSTSSEWVLVTGGCDGAIRFWDIRRAGCFLVLDQSQSQLGRRPPILQRSSANK 250

Query: 534  XXXXRTAAAGSSSVNKL-ISKKKATLGNGKKQSQAVCKLQNLTTSHTMHKSHPGTASSYS 710
                +   AG SS+ K    ++K + GNG KQS     L+         + HPG  SS  
Sbjct: 251  GPTVKPVLAGQSSLGKARAPQRKHSNGNGVKQSSTSKSLK----GSMKQRLHPGMLSSQD 306

Query: 711  RATAHFGAVTGLRATXXXXXXXXXXXXXXXXXWDIESGCSISVNFEATRLQTNKAIQLAL 890
            RATAH+GAVTGL+ T                 WDIESGC+  VNFE  RLQT++ IQLA 
Sbjct: 307  RATAHYGAVTGLKVTDDGMYLLSAGSDSRLRLWDIESGCNTLVNFETVRLQTSRPIQLAT 366

Query: 891  SQDSSAVFIPSMSNVKVYDVLSGLNLQTFYGHYDMVNCCYFNMQDQELYTGSNDRHILVW 1070
            S +S   F+P M+ VK +D+ SG    TF GHY+ VNCC+F++QDQELYTG NDR ILVW
Sbjct: 367  SPNSPLAFVPCMTAVKAFDMWSGRTALTFRGHYEHVNCCWFSLQDQELYTGGNDRQILVW 426

Query: 1071 SPPSSSFSDMDEEERKRLNLKADEDNWS 1154
            S PS   SD DE   K      D DNWS
Sbjct: 427  S-PSRLISDEDEGPVK------DVDNWS 447


>ref|XP_006851542.1| hypothetical protein AMTR_s00040p00175180 [Amborella trichopoda]
            gi|548855236|gb|ERN13123.1| hypothetical protein
            AMTR_s00040p00175180 [Amborella trichopoda]
          Length = 453

 Score =  434 bits (1117), Expect = e-119
 Identities = 217/386 (56%), Positives = 269/386 (69%), Gaps = 2/386 (0%)
 Frame = +3

Query: 3    YDIQQATEYEKG-LIAKHKSLFVVDKQHGYGHKFAISTVIWYPVDTGLFVTGSFDHYVKV 179
            YD+Q AT+Y  G L+AKH SLFVVDK+  + HK+++S+V WYPVDTGLF+TGS DHYVKV
Sbjct: 71   YDVQHATDYNGGGLVAKHTSLFVVDKRQDFSHKYSVSSVAWYPVDTGLFMTGSLDHYVKV 130

Query: 180  WDTNMAQVVMDFKMPGKVYGTAMSSVAKAHMLIAAGSADVQVRLCDIASGAFTHTLSGHR 359
            WDTN  QV M+FKMPGKVYG AMSSV+ +HMLIAA S DVQVRLCDI+SGAF+HTLSGHR
Sbjct: 131  WDTNTVQVEMNFKMPGKVYGIAMSSVSTSHMLIAAVSEDVQVRLCDISSGAFSHTLSGHR 190

Query: 360  GGIMNVEWSTSSEWILMTGGCDGAIRFWDIRRAGCFRILDQSQSQFGXXXXXXXXXXXXX 539
             G+  V+WSTS+EW+L+TGGCDGAIRFWDIRRAGCFR+LDQ Q+QFG             
Sbjct: 191  DGVWAVQWSTSNEWVLVTGGCDGAIRFWDIRRAGCFRVLDQFQTQFGRRPPLLKSSTKGS 250

Query: 540  XXRTAAAGSSSVNKL-ISKKKATLGNGKKQSQAVCKLQNLTTSHTMHKSHPGTASSYSRA 716
               ++ A +S+  K+ + +KKA  G G KQS      +  T    + + HPG  SS +RA
Sbjct: 251  VPESSVASTSASAKVKVPQKKAPCGGGAKQSSI---NKGWTKGSVLQRQHPGMLSSRNRA 307

Query: 717  TAHFGAVTGLRATXXXXXXXXXXXXXXXXXWDIESGCSISVNFEATRLQTNKAIQLALSQ 896
            +AH+GAVTGL+ T                 WDIESG +  VN+EA RLQTNK IQLA++ 
Sbjct: 308  SAHYGAVTGLKVTEDGMYLLSAGTDSRLRLWDIESGRNTLVNYEAMRLQTNKPIQLAVTP 367

Query: 897  DSSAVFIPSMSNVKVYDVLSGLNLQTFYGHYDMVNCCYFNMQDQELYTGSNDRHILVWSP 1076
            D+  VF+P ++  + YD+ SG  + TF GHY+ VNCC+FN QDQELYTGSNDR ILVWSP
Sbjct: 368  DTELVFVPGLTAARAYDIWSGRTILTFRGHYECVNCCWFNSQDQELYTGSNDRQILVWSP 427

Query: 1077 PSSSFSDMDEEERKRLNLKADEDNWS 1154
             S    +++  E K      DED WS
Sbjct: 428  DSMVEEEVENNE-KGPKRSLDEDCWS 452


>gb|EOY15718.1| Transducin/WD40 repeat-like superfamily protein isoform 2 [Theobroma
            cacao]
          Length = 451

 Score =  433 bits (1114), Expect = e-119
 Identities = 229/389 (58%), Positives = 266/389 (68%), Gaps = 5/389 (1%)
 Frame = +3

Query: 3    YDIQQATEYE-KGLIAKHKSLFVVDKQHGYGHKFAISTVIWYPVDTGLFVTGSFDHYVKV 179
            YD+Q+AT YE  GLIAKHK LF VDKQH  GHK+AIS+ IWYPVDTGLFVTGS+DH +KV
Sbjct: 71   YDVQKATNYEGNGLIAKHKCLFSVDKQHEKGHKYAISSAIWYPVDTGLFVTGSYDHCIKV 130

Query: 180  WDTNMAQVVMDFKMPGKVYGTAMSSVAKAHMLIAAGSADVQVRLCDIASGAFTHTLSGHR 359
            WDTN  QVVM+FKMPGKVY TAMS++A +HMLIAAG+ DVQVRLCDI+SGAF HTLSGHR
Sbjct: 131  WDTNTTQVVMNFKMPGKVYRTAMSTLATSHMLIAAGTEDVQVRLCDISSGAFAHTLSGHR 190

Query: 360  GGIMNVEWSTSSEWILMTGGCDGAIRFWDIRRAGCFRILDQSQSQFG---XXXXXXXXXX 530
             GIM  EWSTSSEW+L+TGGCDGAIRFWDIRRAGCF +LDQSQSQ G             
Sbjct: 191  DGIMTAEWSTSSEWVLITGGCDGAIRFWDIRRAGCFLVLDQSQSQLGRRPPVLGRSAANK 250

Query: 531  XXXXXRTAAAGSSSVNKLISKKKATLGNGKKQSQAVCKLQNLTTSHTMHKSHPGTASSYS 710
                  T+A  SS V     +KK   G+G KQS  + ++          + HPG  S   
Sbjct: 251  VSVSKLTSAGPSSLVKSRAPQKKYANGHGIKQS-TIGRMP--AKGSARQRVHPGMLSIQD 307

Query: 711  RATAHFGAVTGLRATXXXXXXXXXXXXXXXXXWDIESGCSISVNFEATRLQTNKAIQLAL 890
            RATAH+GAVTGL+ T                 WD+ESG +  VNFE  RLQT+KAIQLA+
Sbjct: 308  RATAHYGAVTGLKVTEDGMYLLSAGSDSRIKLWDLESGYNTLVNFEMVRLQTSKAIQLAI 367

Query: 891  SQDSSAVFIPSMSNVKVYDVLSGLNLQTFYGHYDMVNCCYFNMQD-QELYTGSNDRHILV 1067
            SQDS+ VF+P M+ VK +DV SG     F GHY+ VNCC+F+ QD QELYTG +DR ILV
Sbjct: 368  SQDSAHVFVPCMTVVKAFDVWSGKMSLAFRGHYESVNCCWFSSQDQQELYTGGSDRQILV 427

Query: 1068 WSPPSSSFSDMDEEERKRLNLKADEDNWS 1154
            WSP  S   DMDE   K      D+DNWS
Sbjct: 428  WSPHKSISDDMDEGHTK------DQDNWS 450


>ref|XP_004142893.1| PREDICTED: DNA excision repair protein ERCC-8-like [Cucumis sativus]
            gi|449482714|ref|XP_004156381.1| PREDICTED: DNA excision
            repair protein ERCC-8-like [Cucumis sativus]
          Length = 446

 Score =  433 bits (1114), Expect = e-119
 Identities = 222/386 (57%), Positives = 268/386 (69%), Gaps = 2/386 (0%)
 Frame = +3

Query: 3    YDIQQATEYEKGLIAKHKSLFVVDKQHGYGHKFAISTVIWYPVDTGLFVTGSFDHYVKVW 182
            +DIQ+AT  E GLIAKH+ +F VDKQH +GHK+AIS+ IWYPVDTGLFVTGSFDH++ VW
Sbjct: 71   FDIQRATHSE-GLIAKHQCIFAVDKQHEHGHKYAISSAIWYPVDTGLFVTGSFDHHINVW 129

Query: 183  DTNMAQVVMDFKMPGKVYGTAMSSVAKAHMLIAAGSADVQVRLCDIASGAFTHTLSGHRG 362
            DTN  QVV++FK+PGKVY TAMSS+A +HMLIAAG+ DVQVRLCDI+SGAF+HTLSGHR 
Sbjct: 130  DTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAFSHTLSGHRD 189

Query: 363  GIMNVEWSTSSEWILMTGGCDGAIRFWDIRRAGCFRILDQSQSQFGXXXXXXXXXXXXXX 542
            G+M+VEWS SSEW+L+TGGCDGAIRFWDIRRAGCFR+LDQSQSQ G              
Sbjct: 190  GVMSVEWSASSEWVLITGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPISGWTANKLS 249

Query: 543  XRTA--AAGSSSVNKLISKKKATLGNGKKQSQAVCKLQNLTTSHTMHKSHPGTASSYSRA 716
               +  A+  S++   I  KK T GN  K S +  KL       T  + HPG  S   RA
Sbjct: 250  TSKSLLASQGSNMKSRIPHKKLTNGNATKPS-STGKLP--AKGSTRQRLHPGLLSGQDRA 306

Query: 717  TAHFGAVTGLRATXXXXXXXXXXXXXXXXXWDIESGCSISVNFEATRLQTNKAIQLALSQ 896
             +H+GAVTGL+ T                 WD+ESGC+  VNFE  RLQTNK +QLA SQ
Sbjct: 307  VSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGCNTLVNFETIRLQTNKPLQLATSQ 366

Query: 897  DSSAVFIPSMSNVKVYDVLSGLNLQTFYGHYDMVNCCYFNMQDQELYTGSNDRHILVWSP 1076
            DSS VF P M+ VK +D+ +G    TF GHY+ VNCC++N  DQELYTG NDR ILVWSP
Sbjct: 367  DSSLVFAPCMATVKAFDMWTGKTSLTFSGHYEGVNCCWYNFPDQELYTGGNDRQILVWSP 426

Query: 1077 PSSSFSDMDEEERKRLNLKADEDNWS 1154
              +S +++D E        AD+DNWS
Sbjct: 427  SQNS-TELDWES------TADKDNWS 445


>ref|XP_006434786.1| hypothetical protein CICLE_v10001152mg [Citrus clementina]
            gi|557536908|gb|ESR48026.1| hypothetical protein
            CICLE_v10001152mg [Citrus clementina]
          Length = 446

 Score =  433 bits (1113), Expect = e-119
 Identities = 225/385 (58%), Positives = 266/385 (69%), Gaps = 1/385 (0%)
 Frame = +3

Query: 3    YDIQQATEYEKG-LIAKHKSLFVVDKQHGYGHKFAISTVIWYPVDTGLFVTGSFDHYVKV 179
            YD+Q+AT+YE G  IAKH+S+FVVDKQH +GHK+AIS+ IWYPVDTGLFVTGS+DHYVKV
Sbjct: 71   YDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGLFVTGSYDHYVKV 130

Query: 180  WDTNMAQVVMDFKMPGKVYGTAMSSVAKAHMLIAAGSADVQVRLCDIASGAFTHTLSGHR 359
            WDTN  +VVM+FKMPGKVY TAMS +A +HMLIAAG+ DVQVRLCDIASGA + TLSGHR
Sbjct: 131  WDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHR 190

Query: 360  GGIMNVEWSTSSEWILMTGGCDGAIRFWDIRRAGCFRILDQSQSQFGXXXXXXXXXXXXX 539
             GIM VEWSTSSEWIL+TGGCDGAIRFWDIRRAGCFR+LDQSQSQ G             
Sbjct: 191  DGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLG-RRPPLLKRKVSI 249

Query: 540  XXRTAAAGSSSVNKLISKKKATLGNGKKQSQAVCKLQNLTTSHTMHKSHPGTASSYSRAT 719
                +A  +SSV     +KK+  GNG +QS +V ++          + HPG  SS  RAT
Sbjct: 250  SKSLSAGQNSSVKPRAPQKKSANGNGVRQS-SVGRIP--AKGSVRQRLHPGMLSSQDRAT 306

Query: 720  AHFGAVTGLRATXXXXXXXXXXXXXXXXXWDIESGCSISVNFEATRLQTNKAIQLALSQD 899
            AH+GAVTGL+ T                 WDIESG +  VNFE  RLQT+K IQLA +QD
Sbjct: 307  AHYGAVTGLKVTENGMYLLSAGSDSRIRLWDIESGRNTLVNFETVRLQTSKPIQLATTQD 366

Query: 900  SSAVFIPSMSNVKVYDVLSGLNLQTFYGHYDMVNCCYFNMQDQELYTGSNDRHILVWSPP 1079
             + VF+P M+ VK +D+ SG    TF GHY+ VNCC F+ QDQELYTG NDR ILVW P 
Sbjct: 367  PAVVFVPCMTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVWCPS 426

Query: 1080 SSSFSDMDEEERKRLNLKADEDNWS 1154
                  +D    +      D+DNWS
Sbjct: 427  RHISDGVDAGPMQ------DQDNWS 445


>ref|XP_006473339.1| PREDICTED: DNA excision repair protein ERCC-8-like isoform X3 [Citrus
            sinensis]
          Length = 441

 Score =  431 bits (1107), Expect = e-118
 Identities = 223/385 (57%), Positives = 266/385 (69%), Gaps = 1/385 (0%)
 Frame = +3

Query: 3    YDIQQATEYEKG-LIAKHKSLFVVDKQHGYGHKFAISTVIWYPVDTGLFVTGSFDHYVKV 179
            YD+Q+AT+YE G  IAKH+S+FVVDKQH +GHK+AIS+ IWYPVDTGLFVTGS+DHYVKV
Sbjct: 71   YDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGLFVTGSYDHYVKV 130

Query: 180  WDTNMAQVVMDFKMPGKVYGTAMSSVAKAHMLIAAGSADVQVRLCDIASGAFTHTLSGHR 359
            WDTN  +VVM+FKMPGKVY TAMS +A +HMLIAAG+ DVQVRLCDIASGA + TLSGHR
Sbjct: 131  WDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHR 190

Query: 360  GGIMNVEWSTSSEWILMTGGCDGAIRFWDIRRAGCFRILDQSQSQFGXXXXXXXXXXXXX 539
             GIM VEWSTSSEWIL+TGGCDGAIRFWDIRRAGCFR+LDQSQSQ G             
Sbjct: 191  DGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLG------RRPPLLK 244

Query: 540  XXRTAAAGSSSVNKLISKKKATLGNGKKQSQAVCKLQNLTTSHTMHKSHPGTASSYSRAT 719
                +A  +SSV     +K++  GNG +QS +V ++          + HPG  SS  RAT
Sbjct: 245  RKSLSAGQNSSVKPRAPQKRSANGNGVRQS-SVGRIP--AKGSVRQRLHPGMLSSQDRAT 301

Query: 720  AHFGAVTGLRATXXXXXXXXXXXXXXXXXWDIESGCSISVNFEATRLQTNKAIQLALSQD 899
            AH+GAVTGL+ T                 WD+ESG +  VNFE  RLQT+K IQLA +QD
Sbjct: 302  AHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQD 361

Query: 900  SSAVFIPSMSNVKVYDVLSGLNLQTFYGHYDMVNCCYFNMQDQELYTGSNDRHILVWSPP 1079
             + VF+P M+ VK +D+ SG    TF GHY+ VNCC F+ QDQELYTG NDR ILVW P 
Sbjct: 362  PAVVFVPCMTAVKAFDIWSGKTCLTFRGHYEHVNCCCFSSQDQELYTGGNDRQILVWCPS 421

Query: 1080 SSSFSDMDEEERKRLNLKADEDNWS 1154
                  +D    +      D+DNWS
Sbjct: 422  RLISDGVDAGPMQ------DQDNWS 440


>ref|XP_006473337.1| PREDICTED: DNA excision repair protein ERCC-8-like isoform X1 [Citrus
            sinensis] gi|568838683|ref|XP_006473338.1| PREDICTED: DNA
            excision repair protein ERCC-8-like isoform X2 [Citrus
            sinensis]
          Length = 446

 Score =  431 bits (1107), Expect = e-118
 Identities = 223/385 (57%), Positives = 266/385 (69%), Gaps = 1/385 (0%)
 Frame = +3

Query: 3    YDIQQATEYEKG-LIAKHKSLFVVDKQHGYGHKFAISTVIWYPVDTGLFVTGSFDHYVKV 179
            YD+Q+AT+YE G  IAKH+S+FVVDKQH +GHK+AIS+ IWYPVDTGLFVTGS+DHYVKV
Sbjct: 71   YDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGLFVTGSYDHYVKV 130

Query: 180  WDTNMAQVVMDFKMPGKVYGTAMSSVAKAHMLIAAGSADVQVRLCDIASGAFTHTLSGHR 359
            WDTN  +VVM+FKMPGKVY TAMS +A +HMLIAAG+ DVQVRLCDIASGA + TLSGHR
Sbjct: 131  WDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHR 190

Query: 360  GGIMNVEWSTSSEWILMTGGCDGAIRFWDIRRAGCFRILDQSQSQFGXXXXXXXXXXXXX 539
             GIM VEWSTSSEWIL+TGGCDGAIRFWDIRRAGCFR+LDQSQSQ G             
Sbjct: 191  DGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLG-RRPPLLKRKVSI 249

Query: 540  XXRTAAAGSSSVNKLISKKKATLGNGKKQSQAVCKLQNLTTSHTMHKSHPGTASSYSRAT 719
                +A  +SSV     +K++  GNG +QS +V ++          + HPG  SS  RAT
Sbjct: 250  SKSLSAGQNSSVKPRAPQKRSANGNGVRQS-SVGRIP--AKGSVRQRLHPGMLSSQDRAT 306

Query: 720  AHFGAVTGLRATXXXXXXXXXXXXXXXXXWDIESGCSISVNFEATRLQTNKAIQLALSQD 899
            AH+GAVTGL+ T                 WD+ESG +  VNFE  RLQT+K IQLA +QD
Sbjct: 307  AHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQD 366

Query: 900  SSAVFIPSMSNVKVYDVLSGLNLQTFYGHYDMVNCCYFNMQDQELYTGSNDRHILVWSPP 1079
             + VF+P M+ VK +D+ SG    TF GHY+ VNCC F+ QDQELYTG NDR ILVW P 
Sbjct: 367  PAVVFVPCMTAVKAFDIWSGKTCLTFRGHYEHVNCCCFSSQDQELYTGGNDRQILVWCPS 426

Query: 1080 SSSFSDMDEEERKRLNLKADEDNWS 1154
                  +D    +      D+DNWS
Sbjct: 427  RLISDGVDAGPMQ------DQDNWS 445