BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00003530
         (1787 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK96584.1| unknown [Populus trichocarpa x Populus deltoides]      338   e-158
gb|EOY11711.1| Chloroplast RNA binding [Theobroma cacao]              345   e-158
ref|XP_002319474.2| hypothetical protein POPTR_0013s00760g [Popu...   337   e-157
ref|XP_002512541.1| NAD dependent epimerase/dehydratase, putativ...   341   e-156
gb|EMJ08534.1| hypothetical protein PRUPE_ppa007071mg [Prunus pe...   340   e-156
ref|XP_006382356.1| hypothetical protein POPTR_0005s01370g [Popu...   338   e-156
ref|XP_004302291.1| PREDICTED: chloroplast stem-loop binding pro...   338   e-155
ref|XP_004146391.1| PREDICTED: chloroplast stem-loop binding pro...   335   e-153
ref|XP_006664006.1| PREDICTED: chloroplast stem-loop binding pro...   332   e-153
ref|XP_002281395.1| PREDICTED: uncharacterized protein At1g09340...   343   e-153
gb|ESW35301.1| hypothetical protein PHAVU_001G223800g [Phaseolus...   330   e-153
ref|XP_006417582.1| hypothetical protein EUTSA_v10007937mg [Eutr...   331   e-152
dbj|BAJ33886.1| unnamed protein product [Thellungiella halophila]     330   e-152
ref|XP_003554610.1| PREDICTED: chloroplast stem-loop binding pro...   337   e-152
gb|EXB53004.1| hypothetical protein L484_018888 [Morus notabilis]     337   e-152
ref|NP_001066657.1| Os12g0420200 [Oryza sativa Japonica Group] g...   329   e-152
ref|XP_006604786.1| PREDICTED: chloroplast stem-loop binding pro...   335   e-152
ref|XP_004241412.1| PREDICTED: chloroplast stem-loop binding pro...   332   e-151
ref|XP_006305088.1| hypothetical protein CARUB_v10009455mg [Caps...   330   e-151
ref|NP_172405.1| chloroplast stem-loop binding protein [Arabidop...   329   e-151

>gb|ABK96584.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 380

 Score =  338 bits (866), Expect(2) = e-158
 Identities = 157/181 (86%), Positives = 171/181 (94%)
 Frame = -2

Query: 1048 DSRGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLARAF 869
            +SRGVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQ+TQLGHVKDLA+AF
Sbjct: 199  ESRGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQMTQLGHVKDLAKAF 258

Query: 868  VTVLGNPKASKQVYNISGSKYVTFDGLARACAKAAGFPEPEIVHYNPKEFDFGKKKAFPF 689
            + VLGN KAS+QV+NISG KYVTFDGLA+ACAKAAGFPEPEIVHYNPK+FDFGKKKAFPF
Sbjct: 259  IQVLGNEKASQQVFNISGEKYVTFDGLAKACAKAAGFPEPEIVHYNPKDFDFGKKKAFPF 318

Query: 688  RDQHFFASIEKAQRELGWTPEFGLVDGLADSYNLDFGRGTFRKAADFSTDDIILGKSFVL 509
            RDQHFFASI+KA+  LGW PEF LV+GLADSYNLDFGRGT+RK ADF TDD+ILGKS VL
Sbjct: 319  RDQHFFASIDKAKHVLGWEPEFDLVEGLADSYNLDFGRGTYRKEADFFTDDLILGKSLVL 378

Query: 508  Q 506
            Q
Sbjct: 379  Q 379



 Score =  249 bits (637), Expect(2) = e-158
 Identities = 128/156 (82%), Positives = 140/156 (89%)
 Frame = -3

Query: 1524 LAPSSLSEFHAAALDLSNIRKKRVWQKKGALRVAAGLSARKILIMGGTRFIGVFLSRILV 1345
            L PSSLS+F+   L      K+RVWQ KGAL+V+A  S++ ILIMGGTRFIGVFLSR+LV
Sbjct: 17   LLPSSLSDFNGTRLHSQVQCKRRVWQTKGALQVSAS-SSKNILIMGGTRFIGVFLSRLLV 75

Query: 1344 KDGHQVTLFTRGKAPITQQLPGESDQDYADFKSKILHLKGDRKDFEFVKTSLAAEGFDVV 1165
            K+GHQVTLFTRGKAPITQQLPGESDQDY+DF SKILHLKGDRKDFEFVKTSLAA+GFDVV
Sbjct: 76   KEGHQVTLFTRGKAPITQQLPGESDQDYSDFSSKILHLKGDRKDFEFVKTSLAAKGFDVV 135

Query: 1164 YDINGREADEVKPILDALPKLEQFIYCSSAGVYLKS 1057
            YDINGREA EV+PILDALPKLEQFIYCSSAGVYLKS
Sbjct: 136  YDINGREAVEVEPILDALPKLEQFIYCSSAGVYLKS 171


>gb|EOY11711.1| Chloroplast RNA binding [Theobroma cacao]
          Length = 379

 Score =  345 bits (884), Expect(2) = e-158
 Identities = 162/181 (89%), Positives = 172/181 (95%)
 Frame = -2

Query: 1045 SRGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLARAFV 866
            SRGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSG+QITQLGHVKDLA+AF+
Sbjct: 199  SRGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGVQITQLGHVKDLAKAFI 258

Query: 865  TVLGNPKASKQVYNISGSKYVTFDGLARACAKAAGFPEPEIVHYNPKEFDFGKKKAFPFR 686
             VLGN KASKQV+NISG KYVTFDGLARACAKAAGFPEPEIVHYNPKEFDFGKKKAFPFR
Sbjct: 259  QVLGNEKASKQVFNISGEKYVTFDGLARACAKAAGFPEPEIVHYNPKEFDFGKKKAFPFR 318

Query: 685  DQHFFASIEKAQRELGWTPEFGLVDGLADSYNLDFGRGTFRKAADFSTDDIILGKSFVLQ 506
            DQHFFASIEKA+  LGW PEF LV+GLADSYNLDFGRGT+RK ADFSTDD+ILGK+ VLQ
Sbjct: 319  DQHFFASIEKAKHVLGWEPEFDLVEGLADSYNLDFGRGTYRKEADFSTDDMILGKTLVLQ 378

Query: 505  T 503
            +
Sbjct: 379  S 379



 Score =  242 bits (617), Expect(2) = e-158
 Identities = 123/156 (78%), Positives = 137/156 (87%)
 Frame = -3

Query: 1524 LAPSSLSEFHAAALDLSNIRKKRVWQKKGALRVAAGLSARKILIMGGTRFIGVFLSRILV 1345
            L PSSLS+F    L     ++K VWQ KGAL VAA  S +KIL+MGGTRFIG+FLSR+LV
Sbjct: 17   LLPSSLSDFSGTKLCQFQYKRK-VWQPKGALHVAAA-STKKILVMGGTRFIGIFLSRLLV 74

Query: 1344 KDGHQVTLFTRGKAPITQQLPGESDQDYADFKSKILHLKGDRKDFEFVKTSLAAEGFDVV 1165
            K+GHQVTLFTRGKAPITQQLPGE D +Y+DFKSKILHLKGDRKDFEFVK+SL+AEGFDVV
Sbjct: 75   KEGHQVTLFTRGKAPITQQLPGEPDSEYSDFKSKILHLKGDRKDFEFVKSSLSAEGFDVV 134

Query: 1164 YDINGREADEVKPILDALPKLEQFIYCSSAGVYLKS 1057
            YDINGREADEV+PILDALP LEQ+IYCSSAGVYLKS
Sbjct: 135  YDINGREADEVEPILDALPNLEQYIYCSSAGVYLKS 170


>ref|XP_002319474.2| hypothetical protein POPTR_0013s00760g [Populus trichocarpa]
            gi|118487652|gb|ABK95651.1| unknown [Populus trichocarpa]
            gi|550324645|gb|EEE95397.2| hypothetical protein
            POPTR_0013s00760g [Populus trichocarpa]
          Length = 380

 Score =  337 bits (864), Expect(2) = e-157
 Identities = 156/181 (86%), Positives = 171/181 (94%)
 Frame = -2

Query: 1048 DSRGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLARAF 869
            +SRGVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQ+TQLGHVKDLA+AF
Sbjct: 199  ESRGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQMTQLGHVKDLAKAF 258

Query: 868  VTVLGNPKASKQVYNISGSKYVTFDGLARACAKAAGFPEPEIVHYNPKEFDFGKKKAFPF 689
            + VLGN KAS+QV+NISG KYVTFDGLA+ACAKAAGFPEPEIVHYNPK+FDFGKKKAFPF
Sbjct: 259  IQVLGNEKASQQVFNISGEKYVTFDGLAKACAKAAGFPEPEIVHYNPKDFDFGKKKAFPF 318

Query: 688  RDQHFFASIEKAQRELGWTPEFGLVDGLADSYNLDFGRGTFRKAADFSTDDIILGKSFVL 509
            RDQHFFASI+KA+  LGW PEF LV+GLADSYNLDFGRGT+RK ADF TDD+I+GKS VL
Sbjct: 319  RDQHFFASIDKAKHVLGWEPEFDLVEGLADSYNLDFGRGTYRKEADFFTDDLIIGKSLVL 378

Query: 508  Q 506
            Q
Sbjct: 379  Q 379



 Score =  248 bits (634), Expect(2) = e-157
 Identities = 128/156 (82%), Positives = 139/156 (89%)
 Frame = -3

Query: 1524 LAPSSLSEFHAAALDLSNIRKKRVWQKKGALRVAAGLSARKILIMGGTRFIGVFLSRILV 1345
            L PSSLS+F+   L      K+RVWQ KGAL+V+A  S++ ILIMGGTRFIGVFLSR+LV
Sbjct: 17   LLPSSLSDFNGTRLHSQVRCKRRVWQTKGALQVSAS-SSKNILIMGGTRFIGVFLSRLLV 75

Query: 1344 KDGHQVTLFTRGKAPITQQLPGESDQDYADFKSKILHLKGDRKDFEFVKTSLAAEGFDVV 1165
            K+GHQVTLFTRGKAPITQ LPGESDQDYADF SKILHLKGDRKDFEFVKTSLAA+GFDVV
Sbjct: 76   KEGHQVTLFTRGKAPITQPLPGESDQDYADFSSKILHLKGDRKDFEFVKTSLAAKGFDVV 135

Query: 1164 YDINGREADEVKPILDALPKLEQFIYCSSAGVYLKS 1057
            YDINGREA EV+PILDALPKLEQFIYCSSAGVYLKS
Sbjct: 136  YDINGREAVEVEPILDALPKLEQFIYCSSAGVYLKS 171


>ref|XP_002512541.1| NAD dependent epimerase/dehydratase, putative [Ricinus communis]
            gi|223548502|gb|EEF49993.1| NAD dependent
            epimerase/dehydratase, putative [Ricinus communis]
          Length = 381

 Score =  341 bits (874), Expect(2) = e-156
 Identities = 159/182 (87%), Positives = 171/182 (93%)
 Frame = -2

Query: 1048 DSRGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLARAF 869
            +S GVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLA+AF
Sbjct: 200  ESSGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLAKAF 259

Query: 868  VTVLGNPKASKQVYNISGSKYVTFDGLARACAKAAGFPEPEIVHYNPKEFDFGKKKAFPF 689
            + VLGN KASKQV+NISG KYVTFDGLARACAKA GFPEPEIVHYNPKEFDFGKKKAFPF
Sbjct: 260  IQVLGNEKASKQVFNISGEKYVTFDGLARACAKAGGFPEPEIVHYNPKEFDFGKKKAFPF 319

Query: 688  RDQHFFASIEKAQRELGWTPEFGLVDGLADSYNLDFGRGTFRKAADFSTDDIILGKSFVL 509
            RDQHFFAS++KA+  LGW PEF LV+GLADSYNLDFGRGTFRK ADF+TDD+ILGKS VL
Sbjct: 320  RDQHFFASVDKAKHVLGWEPEFDLVEGLADSYNLDFGRGTFRKEADFTTDDMILGKSLVL 379

Query: 508  QT 503
            Q+
Sbjct: 380  QS 381



 Score =  241 bits (614), Expect(2) = e-156
 Identities = 123/165 (74%), Positives = 139/165 (84%)
 Frame = -3

Query: 1551 KQASPWATPLAPSSLSEFHAAALDLSNIRKKRVWQKKGALRVAAGLSARKILIMGGTRFI 1372
            +Q  P  + L  S  S+F+   L      K+RVWQ KGAL+V A  S++ ILIMGGTRFI
Sbjct: 9    QQTQPSFSLLTSSLSSDFNGTRLHTQIQCKRRVWQAKGALQVTAS-SSKNILIMGGTRFI 67

Query: 1371 GVFLSRILVKDGHQVTLFTRGKAPITQQLPGESDQDYADFKSKILHLKGDRKDFEFVKTS 1192
            GVFLSR+LVK+GHQVTLFTRGKAPITQ+LPGESDQDYADF SK+LHLKGDRKDF+FVK+S
Sbjct: 68   GVFLSRLLVKEGHQVTLFTRGKAPITQKLPGESDQDYADFSSKVLHLKGDRKDFDFVKSS 127

Query: 1191 LAAEGFDVVYDINGREADEVKPILDALPKLEQFIYCSSAGVYLKS 1057
            L+A+GFDVVYDINGREADEV PILDALP LEQFIYCSSAGVYLKS
Sbjct: 128  LSAKGFDVVYDINGREADEVAPILDALPNLEQFIYCSSAGVYLKS 172


>gb|EMJ08534.1| hypothetical protein PRUPE_ppa007071mg [Prunus persica]
          Length = 383

 Score =  340 bits (873), Expect(2) = e-156
 Identities = 159/182 (87%), Positives = 171/182 (93%)
 Frame = -2

Query: 1048 DSRGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLARAF 869
            +S+GVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIP+PNSGIQITQLGHVKDLA AF
Sbjct: 202  ESKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVPNSGIQITQLGHVKDLATAF 261

Query: 868  VTVLGNPKASKQVYNISGSKYVTFDGLARACAKAAGFPEPEIVHYNPKEFDFGKKKAFPF 689
            + VLGN KASK+V+NISG KYVTFDGLA+ACAKA GFPEPEIVHYNPKEFDFGKKKAFPF
Sbjct: 262  IKVLGNEKASKEVFNISGEKYVTFDGLAKACAKAGGFPEPEIVHYNPKEFDFGKKKAFPF 321

Query: 688  RDQHFFASIEKAQRELGWTPEFGLVDGLADSYNLDFGRGTFRKAADFSTDDIILGKSFVL 509
            RDQHFFASI+KA+  LGW PEF LV+GLADSYNLDFGRGTFRK ADFSTDDIILGKS VL
Sbjct: 322  RDQHFFASIDKAKSVLGWKPEFDLVEGLADSYNLDFGRGTFRKEADFSTDDIILGKSLVL 381

Query: 508  QT 503
            Q+
Sbjct: 382  QS 383



 Score =  240 bits (613), Expect(2) = e-156
 Identities = 126/168 (75%), Positives = 145/168 (86%), Gaps = 1/168 (0%)
 Frame = -3

Query: 1557 QPKQASPWATPLAPSSLSEFHAAALDLSNIR-KKRVWQKKGALRVAAGLSARKILIMGGT 1381
            QP+Q  P  + L PSSLS+F+   L  S ++ K+RV Q K AL+V A  SA+KILIMGGT
Sbjct: 8    QPQQRHPSFSLLPPSSLSDFNGTRLLHSQLQCKRRVSQPKVALQVTAS-SAKKILIMGGT 66

Query: 1380 RFIGVFLSRILVKDGHQVTLFTRGKAPITQQLPGESDQDYADFKSKILHLKGDRKDFEFV 1201
            RFIG+FLSR+LVK+GHQVTLFTRGKAPITQQLPGESD+DY DF SKILHLKGDRKD+EFV
Sbjct: 67   RFIGLFLSRLLVKEGHQVTLFTRGKAPITQQLPGESDKDYTDFASKILHLKGDRKDYEFV 126

Query: 1200 KTSLAAEGFDVVYDINGREADEVKPILDALPKLEQFIYCSSAGVYLKS 1057
            K+SL+AEGFDVVYDINGREA+EV PIL+ LPKLEQ+IYCSSAGVYLKS
Sbjct: 127  KSSLSAEGFDVVYDINGREAEEVVPILEGLPKLEQYIYCSSAGVYLKS 174


>ref|XP_006382356.1| hypothetical protein POPTR_0005s01370g [Populus trichocarpa]
            gi|550337715|gb|ERP60153.1| hypothetical protein
            POPTR_0005s01370g [Populus trichocarpa]
          Length = 380

 Score =  338 bits (866), Expect(2) = e-156
 Identities = 159/181 (87%), Positives = 170/181 (93%)
 Frame = -2

Query: 1048 DSRGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLARAF 869
            +S+GVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLA+AF
Sbjct: 199  ESKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLAKAF 258

Query: 868  VTVLGNPKASKQVYNISGSKYVTFDGLARACAKAAGFPEPEIVHYNPKEFDFGKKKAFPF 689
            V VLGN KAS+QV+NISG KYVTFDGLARACAKAAGFPEP IVHYNPKEFDFGKKKAFPF
Sbjct: 259  VEVLGNDKASQQVFNISGEKYVTFDGLARACAKAAGFPEPVIVHYNPKEFDFGKKKAFPF 318

Query: 688  RDQHFFASIEKAQRELGWTPEFGLVDGLADSYNLDFGRGTFRKAADFSTDDIILGKSFVL 509
            RDQHFFASI+KA+  LGW PEF LV+GLADSYNLDFG GT+RK ADFSTDD+ILGKS VL
Sbjct: 319  RDQHFFASIDKARHVLGWEPEFDLVEGLADSYNLDFGTGTYRKEADFSTDDLILGKSLVL 378

Query: 508  Q 506
            Q
Sbjct: 379  Q 379



 Score =  241 bits (616), Expect(2) = e-156
 Identities = 123/153 (80%), Positives = 136/153 (88%)
 Frame = -3

Query: 1515 SSLSEFHAAALDLSNIRKKRVWQKKGALRVAAGLSARKILIMGGTRFIGVFLSRILVKDG 1336
            SSLS+F+   L      K+R WQ K AL+V+A  S++ ILIMGGTRFIGVFLSR+LVK+G
Sbjct: 20   SSLSDFNGTRLHSQVQCKRRAWQTKRALQVSAS-SSKNILIMGGTRFIGVFLSRLLVKEG 78

Query: 1335 HQVTLFTRGKAPITQQLPGESDQDYADFKSKILHLKGDRKDFEFVKTSLAAEGFDVVYDI 1156
            HQVTLFTRGKAPITQQLPGESDQDYADF SK+LHLKGDRKDFEFVKTSLAA+GFDV+YDI
Sbjct: 79   HQVTLFTRGKAPITQQLPGESDQDYADFSSKVLHLKGDRKDFEFVKTSLAAKGFDVIYDI 138

Query: 1155 NGREADEVKPILDALPKLEQFIYCSSAGVYLKS 1057
            NGREA EV+PILDALPKLEQFIYCSSAGVYLKS
Sbjct: 139  NGREAVEVEPILDALPKLEQFIYCSSAGVYLKS 171


>ref|XP_004302291.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa b,
            chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 380

 Score =  338 bits (866), Expect(2) = e-155
 Identities = 159/182 (87%), Positives = 171/182 (93%)
 Frame = -2

Query: 1048 DSRGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLARAF 869
            +SRGVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIP+PNSGIQITQLGHVKDLA AF
Sbjct: 199  ESRGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVPNSGIQITQLGHVKDLATAF 258

Query: 868  VTVLGNPKASKQVYNISGSKYVTFDGLARACAKAAGFPEPEIVHYNPKEFDFGKKKAFPF 689
            V VL N KASK+V+NISG KYVTFDGLA+ACAKAAGFPEPEIVHYNPKEFDFGKKKAFPF
Sbjct: 259  VKVLCNEKASKEVFNISGEKYVTFDGLAKACAKAAGFPEPEIVHYNPKEFDFGKKKAFPF 318

Query: 688  RDQHFFASIEKAQRELGWTPEFGLVDGLADSYNLDFGRGTFRKAADFSTDDIILGKSFVL 509
            RDQHFFASI+KA+  LGW PE+ LV+GLADSYNLDFGRGTFRK ADFSTDD+ILGKS VL
Sbjct: 319  RDQHFFASIDKAKSVLGWKPEYDLVEGLADSYNLDFGRGTFRKEADFSTDDMILGKSLVL 378

Query: 508  QT 503
            Q+
Sbjct: 379  QS 380



 Score =  241 bits (614), Expect(2) = e-155
 Identities = 124/165 (75%), Positives = 144/165 (87%), Gaps = 1/165 (0%)
 Frame = -3

Query: 1548 QASPWATPLAPSSLSEFHAAALDLSNIR-KKRVWQKKGALRVAAGLSARKILIMGGTRFI 1372
            Q  P  + L PSSLS+F+   L  S+++ K+RV Q +GAL+V+A  SA+KILIMGGTRFI
Sbjct: 8    QRHPSVSLLPPSSLSDFNGTRLLHSHLQFKRRVSQPRGALQVSAS-SAKKILIMGGTRFI 66

Query: 1371 GVFLSRILVKDGHQVTLFTRGKAPITQQLPGESDQDYADFKSKILHLKGDRKDFEFVKTS 1192
            G+FLSR+LVK+GHQVTLFTRGKAPITQQLPGESD DY DF SKILHLKGDRKDF+FVK+S
Sbjct: 67   GIFLSRLLVKEGHQVTLFTRGKAPITQQLPGESDSDYTDFASKILHLKGDRKDFDFVKSS 126

Query: 1191 LAAEGFDVVYDINGREADEVKPILDALPKLEQFIYCSSAGVYLKS 1057
            L+AEGFDVVYDINGREA+E+ PILD LPKLEQ+IYCSSAGVYLKS
Sbjct: 127  LSAEGFDVVYDINGREAEEIVPILDGLPKLEQYIYCSSAGVYLKS 171


>ref|XP_004146391.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa b,
            chloroplastic-like [Cucumis sativus]
            gi|449480815|ref|XP_004156003.1| PREDICTED: chloroplast
            stem-loop binding protein of 41 kDa b, chloroplastic-like
            [Cucumis sativus]
          Length = 383

 Score =  335 bits (859), Expect(2) = e-153
 Identities = 159/180 (88%), Positives = 167/180 (92%)
 Frame = -2

Query: 1045 SRGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLARAFV 866
            S+ VNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLA AFV
Sbjct: 203  SKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLANAFV 262

Query: 865  TVLGNPKASKQVYNISGSKYVTFDGLARACAKAAGFPEPEIVHYNPKEFDFGKKKAFPFR 686
             VLGN KAS+QV+NISG KYV+FDGLA+ACAKA GFPEPEIVHYNPKEFDFGKKK FPFR
Sbjct: 263  QVLGNDKASQQVFNISGEKYVSFDGLAKACAKAGGFPEPEIVHYNPKEFDFGKKKPFPFR 322

Query: 685  DQHFFASIEKAQRELGWTPEFGLVDGLADSYNLDFGRGTFRKAADFSTDDIILGKSFVLQ 506
            DQHFFASIEKA+  LGW PEF LV+GLADSYNLDFGRGTFRK ADFSTDDIILGKS VLQ
Sbjct: 323  DQHFFASIEKAKSVLGWKPEFDLVEGLADSYNLDFGRGTFRKEADFSTDDIILGKSLVLQ 382



 Score =  237 bits (605), Expect(2) = e-153
 Identities = 119/154 (77%), Positives = 135/154 (87%)
 Frame = -3

Query: 1518 PSSLSEFHAAALDLSNIRKKRVWQKKGALRVAAGLSARKILIMGGTRFIGVFLSRILVKD 1339
            PSSLS+F+ A L      K++V Q KG L V A  + + ILIMGGTRFIG+FLSR+LVK+
Sbjct: 22   PSSLSDFNGARLHAQVQYKRKVMQPKGGLHVTAS-AKKNILIMGGTRFIGIFLSRLLVKE 80

Query: 1338 GHQVTLFTRGKAPITQQLPGESDQDYADFKSKILHLKGDRKDFEFVKTSLAAEGFDVVYD 1159
            GHQVTLFTRGKAP+TQQLPGES+ DYADFKSKILHLKGDRKDF+FVK+SL+A GFDVVYD
Sbjct: 81   GHQVTLFTRGKAPVTQQLPGESEADYADFKSKILHLKGDRKDFDFVKSSLSAAGFDVVYD 140

Query: 1158 INGREADEVKPILDALPKLEQFIYCSSAGVYLKS 1057
            INGREADEV+PI+DALPKLEQFIYCSSAGVYLKS
Sbjct: 141  INGREADEVEPIIDALPKLEQFIYCSSAGVYLKS 174


>ref|XP_006664006.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa b,
            chloroplastic-like [Oryza brachyantha]
          Length = 376

 Score =  332 bits (852), Expect(2) = e-153
 Identities = 154/179 (86%), Positives = 167/179 (93%)
 Frame = -2

Query: 1048 DSRGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLARAF 869
            +SR VNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIP+P +G QITQLGHVKDLA AF
Sbjct: 196  ESRDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVPGAGNQITQLGHVKDLATAF 255

Query: 868  VTVLGNPKASKQVYNISGSKYVTFDGLARACAKAAGFPEPEIVHYNPKEFDFGKKKAFPF 689
            V  LGNPKAS+QV+NISG+KYVTFDGLARACAKA GFPEPEIVHYNPK+FDFGKKKAFPF
Sbjct: 256  VLSLGNPKASRQVFNISGAKYVTFDGLARACAKAGGFPEPEIVHYNPKDFDFGKKKAFPF 315

Query: 688  RDQHFFASIEKAQRELGWTPEFGLVDGLADSYNLDFGRGTFRKAADFSTDDIILGKSFV 512
            RDQHFFASIEKA +ELGWTPE+ LV+GLADSYNLDFGRGTFRK ADF+TDD+ILGK  V
Sbjct: 316  RDQHFFASIEKASKELGWTPEYDLVEGLADSYNLDFGRGTFRKEADFTTDDMILGKKLV 374



 Score =  238 bits (607), Expect(2) = e-153
 Identities = 119/164 (72%), Positives = 142/164 (86%), Gaps = 1/164 (0%)
 Frame = -3

Query: 1545 ASPWATPLAPSSLSEFHAAALDLSNIRKKRVWQKKGA-LRVAAGLSARKILIMGGTRFIG 1369
            AS  ++ L PS +S+F  AAL +S+  ++R WQ +GA ++VAA   ++ IL+MGGTRFIG
Sbjct: 5    ASLKSSLLLPSPISDFSGAALSISSQTRRRSWQPRGARMQVAAAADSKNILVMGGTRFIG 64

Query: 1368 VFLSRILVKDGHQVTLFTRGKAPITQQLPGESDQDYADFKSKILHLKGDRKDFEFVKTSL 1189
            VFLSR+LVK+GHQVTLFTRGKAPITQQLPGESD +YA+F SK+LHLKGDR+DF+FVKTSL
Sbjct: 65   VFLSRLLVKEGHQVTLFTRGKAPITQQLPGESDAEYAEFSSKVLHLKGDRQDFDFVKTSL 124

Query: 1188 AAEGFDVVYDINGREADEVKPILDALPKLEQFIYCSSAGVYLKS 1057
            AA+GFDVVYDINGREA EV PILDALP LEQ+IYCSSAGVYLKS
Sbjct: 125  AAKGFDVVYDINGREAVEVAPILDALPNLEQYIYCSSAGVYLKS 168


>ref|XP_002281395.1| PREDICTED: uncharacterized protein At1g09340, chloroplastic [Vitis
            vinifera] gi|147773479|emb|CAN73432.1| hypothetical
            protein VITISV_032681 [Vitis vinifera]
            gi|296089806|emb|CBI39625.3| unnamed protein product
            [Vitis vinifera]
          Length = 378

 Score =  343 bits (879), Expect(2) = e-153
 Identities = 163/180 (90%), Positives = 169/180 (93%)
 Frame = -2

Query: 1048 DSRGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLARAF 869
            DSRGVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLA+AF
Sbjct: 198  DSRGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLAKAF 257

Query: 868  VTVLGNPKASKQVYNISGSKYVTFDGLARACAKAAGFPEPEIVHYNPKEFDFGKKKAFPF 689
            + VL N KASKQV+NISG KYVTFDGLARACAK AGFPEPEIVHYNPKEFDFGKKKAFPF
Sbjct: 258  LLVLSNEKASKQVFNISGEKYVTFDGLARACAKGAGFPEPEIVHYNPKEFDFGKKKAFPF 317

Query: 688  RDQHFFASIEKAQRELGWTPEFGLVDGLADSYNLDFGRGTFRKAADFSTDDIILGKSFVL 509
            RDQHFFASIEKA+  LGW PEF LV+GLADSYNLDFGRGTFRK ADFSTDDIILGKS VL
Sbjct: 318  RDQHFFASIEKAKSVLGWKPEFDLVEGLADSYNLDFGRGTFRKEADFSTDDIILGKSLVL 377



 Score =  227 bits (578), Expect(2) = e-153
 Identities = 116/156 (74%), Positives = 133/156 (85%)
 Frame = -3

Query: 1524 LAPSSLSEFHAAALDLSNIRKKRVWQKKGALRVAAGLSARKILIMGGTRFIGVFLSRILV 1345
            L PSSLS+F+   L      +++V Q KGAL V A    +KIL+MGGTRFIGVFL+R+LV
Sbjct: 16   LLPSSLSDFNGIRLTNHIQCRRKVCQPKGALHVTAS-GEKKILMMGGTRFIGVFLARLLV 74

Query: 1344 KDGHQVTLFTRGKAPITQQLPGESDQDYADFKSKILHLKGDRKDFEFVKTSLAAEGFDVV 1165
            K+GHQVTLFTRGKA ITQQLPGESD+DYA+F SK+LHLKGDRKDFEFVKTSLAAEGFDVV
Sbjct: 75   KEGHQVTLFTRGKAAITQQLPGESDKDYAEFSSKVLHLKGDRKDFEFVKTSLAAEGFDVV 134

Query: 1164 YDINGREADEVKPILDALPKLEQFIYCSSAGVYLKS 1057
            YDINGREA E++PILDALP L+Q+IYCSSAGVY KS
Sbjct: 135  YDINGREAVEIEPILDALPNLQQYIYCSSAGVYKKS 170


>gb|ESW35301.1| hypothetical protein PHAVU_001G223800g [Phaseolus vulgaris]
          Length = 378

 Score =  330 bits (847), Expect(2) = e-153
 Identities = 155/178 (87%), Positives = 166/178 (93%)
 Frame = -2

Query: 1045 SRGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLARAFV 866
            S+ VNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP+SGIQITQLGHVKDLARAFV
Sbjct: 199  SKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPSSGIQITQLGHVKDLARAFV 258

Query: 865  TVLGNPKASKQVYNISGSKYVTFDGLARACAKAAGFPEPEIVHYNPKEFDFGKKKAFPFR 686
             VLGN KASK+V+NISG KYVTFDGLA+ACAKA GFPEPE+VHYNPK+FDFGKKK+FPFR
Sbjct: 259  QVLGNDKASKEVFNISGEKYVTFDGLAKACAKAGGFPEPELVHYNPKDFDFGKKKSFPFR 318

Query: 685  DQHFFASIEKAQRELGWTPEFGLVDGLADSYNLDFGRGTFRKAADFSTDDIILGKSFV 512
            DQHFFASIEKA+R +GW PEF LV GLADSYNLDFGRGTFRK ADFSTDDIILGK  V
Sbjct: 319  DQHFFASIEKAKRLVGWEPEFDLVGGLADSYNLDFGRGTFRKEADFSTDDIILGKKLV 376



 Score =  239 bits (609), Expect(2) = e-153
 Identities = 122/158 (77%), Positives = 137/158 (86%)
 Frame = -3

Query: 1530 TPLAPSSLSEFHAAALDLSNIRKKRVWQKKGALRVAAGLSARKILIMGGTRFIGVFLSRI 1351
            +PLA SSLS+F    L      K+++WQ KG+  V+A  S +KILIMGGTRFIGVFLSR+
Sbjct: 15   SPLA-SSLSDFSGTRLPTQLQLKRKLWQPKGSFYVSAS-STKKILIMGGTRFIGVFLSRL 72

Query: 1350 LVKDGHQVTLFTRGKAPITQQLPGESDQDYADFKSKILHLKGDRKDFEFVKTSLAAEGFD 1171
            LVK+GHQVTLFTRGK P+TQQLPGESD DYADF SKILHLKGDRKDFEFVK+SL+AEGF+
Sbjct: 73   LVKEGHQVTLFTRGKTPVTQQLPGESDSDYADFSSKILHLKGDRKDFEFVKSSLSAEGFE 132

Query: 1170 VVYDINGREADEVKPILDALPKLEQFIYCSSAGVYLKS 1057
            VVYDINGREADEV+PILDALP LEQFIYCSSAGVYLKS
Sbjct: 133  VVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKS 170


>ref|XP_006417582.1| hypothetical protein EUTSA_v10007937mg [Eutrema salsugineum]
            gi|557095353|gb|ESQ35935.1| hypothetical protein
            EUTSA_v10007937mg [Eutrema salsugineum]
          Length = 379

 Score =  331 bits (848), Expect(2) = e-152
 Identities = 152/181 (83%), Positives = 167/181 (92%)
 Frame = -2

Query: 1045 SRGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLARAFV 866
            S+GVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIP+PNSGIQI+QLGHVKDLA AF+
Sbjct: 199  SKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVPNSGIQISQLGHVKDLATAFL 258

Query: 865  TVLGNPKASKQVYNISGSKYVTFDGLARACAKAAGFPEPEIVHYNPKEFDFGKKKAFPFR 686
             VLGN KAS++++NISG KYVTFDGLARACAKA GFPEPEIVHYNPKEFDFGKKKAFPFR
Sbjct: 259  AVLGNEKASREIFNISGEKYVTFDGLARACAKAGGFPEPEIVHYNPKEFDFGKKKAFPFR 318

Query: 685  DQHFFASIEKAQRELGWTPEFGLVDGLADSYNLDFGRGTFRKAADFSTDDIILGKSFVLQ 506
            DQHFFAS+EKA+  LGW PEF LV+GL DSYNLDFGRGTFRK ADF+TDD+IL K  VLQ
Sbjct: 319  DQHFFASVEKAKHVLGWKPEFDLVEGLTDSYNLDFGRGTFRKEADFTTDDMILSKKLVLQ 378

Query: 505  T 503
            +
Sbjct: 379  S 379



 Score =  238 bits (607), Expect(2) = e-152
 Identities = 122/164 (74%), Positives = 143/164 (87%)
 Frame = -3

Query: 1548 QASPWATPLAPSSLSEFHAAALDLSNIRKKRVWQKKGALRVAAGLSARKILIMGGTRFIG 1369
            Q S  +  L  SSLS+F+ A L L    K++V+Q KGAL V+A  S +KILIMGGTRFIG
Sbjct: 8    QQSQPSFSLLTSSLSDFNGAKLHLQVQYKRKVYQPKGALYVSAS-SEKKILIMGGTRFIG 66

Query: 1368 VFLSRILVKDGHQVTLFTRGKAPITQQLPGESDQDYADFKSKILHLKGDRKDFEFVKTSL 1189
            VFLSR+LVK+GHQVTLFTRGK+PI +QLPGESDQD+ADF SKILHLKGDRKD++FVK+SL
Sbjct: 67   VFLSRLLVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKDYDFVKSSL 126

Query: 1188 AAEGFDVVYDINGREADEVKPILDALPKLEQFIYCSSAGVYLKS 1057
            +AEGFDVVYDINGREA+EV+PI+DALPKLEQ+IYCSSAGVYLKS
Sbjct: 127  SAEGFDVVYDINGREAEEVEPIIDALPKLEQYIYCSSAGVYLKS 170


>dbj|BAJ33886.1| unnamed protein product [Thellungiella halophila]
          Length = 379

 Score =  330 bits (847), Expect(2) = e-152
 Identities = 151/181 (83%), Positives = 167/181 (92%)
 Frame = -2

Query: 1045 SRGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLARAFV 866
            S+GVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIP+PNSGIQI+QLGHVKDLA AF+
Sbjct: 199  SKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVPNSGIQISQLGHVKDLATAFL 258

Query: 865  TVLGNPKASKQVYNISGSKYVTFDGLARACAKAAGFPEPEIVHYNPKEFDFGKKKAFPFR 686
             VLGN KAS++++NISG KY+TFDGLARACAKA GFPEPEIVHYNPKEFDFGKKKAFPFR
Sbjct: 259  AVLGNEKASREIFNISGEKYITFDGLARACAKAGGFPEPEIVHYNPKEFDFGKKKAFPFR 318

Query: 685  DQHFFASIEKAQRELGWTPEFGLVDGLADSYNLDFGRGTFRKAADFSTDDIILGKSFVLQ 506
            DQHFFAS+EKA+  LGW PEF LV+GL DSYNLDFGRGTFRK ADF+TDD+IL K  VLQ
Sbjct: 319  DQHFFASVEKAKHVLGWKPEFDLVEGLTDSYNLDFGRGTFRKEADFTTDDMILSKKLVLQ 378

Query: 505  T 503
            +
Sbjct: 379  S 379



 Score =  238 bits (607), Expect(2) = e-152
 Identities = 122/164 (74%), Positives = 143/164 (87%)
 Frame = -3

Query: 1548 QASPWATPLAPSSLSEFHAAALDLSNIRKKRVWQKKGALRVAAGLSARKILIMGGTRFIG 1369
            Q S  +  L  SSLS+F+ A L L    K++V+Q KGAL V+A  S +KILIMGGTRFIG
Sbjct: 8    QQSQPSFSLLTSSLSDFNGAKLHLQVQYKRKVYQPKGALYVSAS-SEKKILIMGGTRFIG 66

Query: 1368 VFLSRILVKDGHQVTLFTRGKAPITQQLPGESDQDYADFKSKILHLKGDRKDFEFVKTSL 1189
            VFLSR+LVK+GHQVTLFTRGK+PI +QLPGESDQD+ADF SKILHLKGDRKD++FVK+SL
Sbjct: 67   VFLSRLLVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKDYDFVKSSL 126

Query: 1188 AAEGFDVVYDINGREADEVKPILDALPKLEQFIYCSSAGVYLKS 1057
            +AEGFDVVYDINGREA+EV+PI+DALPKLEQ+IYCSSAGVYLKS
Sbjct: 127  SAEGFDVVYDINGREAEEVEPIIDALPKLEQYIYCSSAGVYLKS 170


>ref|XP_003554610.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa b,
            chloroplastic-like isoform X1 [Glycine max]
          Length = 378

 Score =  337 bits (864), Expect(2) = e-152
 Identities = 156/178 (87%), Positives = 169/178 (94%)
 Frame = -2

Query: 1045 SRGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLARAFV 866
            +RGVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP+SG+QITQLGHVKDLA AF+
Sbjct: 199  ARGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPSSGLQITQLGHVKDLATAFI 258

Query: 865  TVLGNPKASKQVYNISGSKYVTFDGLARACAKAAGFPEPEIVHYNPKEFDFGKKKAFPFR 686
             VLGN KASK+V+NISG KYVTFDGLARACAKA GFPEPEI+HYNPK+FDFGKKK+FPFR
Sbjct: 259  QVLGNEKASKEVFNISGEKYVTFDGLARACAKAGGFPEPEIIHYNPKDFDFGKKKSFPFR 318

Query: 685  DQHFFASIEKAQRELGWTPEFGLVDGLADSYNLDFGRGTFRKAADFSTDDIILGKSFV 512
            DQHFFASIEKA+R LGW PEFGLV+GLADSYNLDFGRGT+RK ADFSTDDIILGKS V
Sbjct: 319  DQHFFASIEKAKRVLGWEPEFGLVEGLADSYNLDFGRGTYRKEADFSTDDIILGKSLV 376



 Score =  231 bits (590), Expect(2) = e-152
 Identities = 120/158 (75%), Positives = 135/158 (85%)
 Frame = -3

Query: 1530 TPLAPSSLSEFHAAALDLSNIRKKRVWQKKGALRVAAGLSARKILIMGGTRFIGVFLSRI 1351
            +PLA SSL +F    L      K+++   KG+  V+A  S +KILIMGGTRFIGVFLSR+
Sbjct: 15   SPLA-SSLFDFSGTRLQTQLQFKRKLCHPKGSFYVSAS-STKKILIMGGTRFIGVFLSRL 72

Query: 1350 LVKDGHQVTLFTRGKAPITQQLPGESDQDYADFKSKILHLKGDRKDFEFVKTSLAAEGFD 1171
            LVK+GHQVTLFTRGKAP+TQQLPGESD DYADF SKILHLKGDRKDF+FVK+SL+AEGFD
Sbjct: 73   LVKEGHQVTLFTRGKAPVTQQLPGESDNDYADFSSKILHLKGDRKDFDFVKSSLSAEGFD 132

Query: 1170 VVYDINGREADEVKPILDALPKLEQFIYCSSAGVYLKS 1057
            VVYDINGREADEV+PILDALP LEQFIYCSSAGVYLKS
Sbjct: 133  VVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKS 170


>gb|EXB53004.1| hypothetical protein L484_018888 [Morus notabilis]
          Length = 380

 Score =  337 bits (865), Expect(2) = e-152
 Identities = 161/180 (89%), Positives = 169/180 (93%)
 Frame = -2

Query: 1042 RGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLARAFVT 863
            RGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLARAFV 
Sbjct: 201  RGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLARAFVQ 260

Query: 862  VLGNPKASKQVYNISGSKYVTFDGLARACAKAAGFPEPEIVHYNPKEFDFGKKKAFPFRD 683
            VLGN KASKQV+NISG KYVTFDGLARACAKA GFPEPEI+HYNPKEFDFGKKKAFPFRD
Sbjct: 261  VLGNEKASKQVFNISGEKYVTFDGLARACAKAGGFPEPEIIHYNPKEFDFGKKKAFPFRD 320

Query: 682  QHFFASIEKAQRELGWTPEFGLVDGLADSYNLDFGRGTFRKAADFSTDDIILGKSFVLQT 503
            QHFFAS+EKA+  LG+ PEF LV+GLADSY LDFGRGT+RK ADFSTDDIILGKS VLQ+
Sbjct: 321  QHFFASVEKAKSVLGFKPEFDLVEGLADSYILDFGRGTYRKEADFSTDDIILGKSLVLQS 380



 Score =  230 bits (587), Expect(2) = e-152
 Identities = 122/160 (76%), Positives = 134/160 (83%), Gaps = 2/160 (1%)
 Frame = -3

Query: 1530 TPLA--PSSLSEFHAAALDLSNIRKKRVWQKKGALRVAAGLSARKILIMGGTRFIGVFLS 1357
            TPL+  PSSLS+F+   L      KKR  Q KGAL+V A  S +KILIMGGTRFIGVFLS
Sbjct: 13   TPLSLLPSSLSDFNGTKLHAQVQFKKRDSQPKGALQVTAS-STKKILIMGGTRFIGVFLS 71

Query: 1356 RILVKDGHQVTLFTRGKAPITQQLPGESDQDYADFKSKILHLKGDRKDFEFVKTSLAAEG 1177
            R+LVK+GHQVTLFTRGKAPI+QQLPGESD DY DF SKILHLKGDRKD + VK+ L+AEG
Sbjct: 72   RLLVKEGHQVTLFTRGKAPISQQLPGESDADYTDFSSKILHLKGDRKDSDVVKSGLSAEG 131

Query: 1176 FDVVYDINGREADEVKPILDALPKLEQFIYCSSAGVYLKS 1057
            FDVVYDINGREADEV PILDALP LEQ+IYCSSAGVYLKS
Sbjct: 132  FDVVYDINGREADEVAPILDALPNLEQYIYCSSAGVYLKS 171


>ref|NP_001066657.1| Os12g0420200 [Oryza sativa Japonica Group]
            gi|108862567|gb|ABA97622.2| RNA binding protein,
            putative, expressed [Oryza sativa Japonica Group]
            gi|113649164|dbj|BAF29676.1| Os12g0420200 [Oryza sativa
            Japonica Group] gi|222616978|gb|EEE53110.1| hypothetical
            protein OsJ_35887 [Oryza sativa Japonica Group]
          Length = 376

 Score =  329 bits (844), Expect(2) = e-152
 Identities = 153/179 (85%), Positives = 165/179 (92%)
 Frame = -2

Query: 1048 DSRGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLARAF 869
            ++R VNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIP+P +G QITQLGHVKDLA AF
Sbjct: 196  ETRDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVPGAGNQITQLGHVKDLATAF 255

Query: 868  VTVLGNPKASKQVYNISGSKYVTFDGLARACAKAAGFPEPEIVHYNPKEFDFGKKKAFPF 689
            V  LGNPKASKQV+NISG+KYVTFDGLARACAKA GFPEPEIVHYNPK+FDFGKKKAFPF
Sbjct: 256  VLALGNPKASKQVFNISGAKYVTFDGLARACAKAGGFPEPEIVHYNPKDFDFGKKKAFPF 315

Query: 688  RDQHFFASIEKAQRELGWTPEFGLVDGLADSYNLDFGRGTFRKAADFSTDDIILGKSFV 512
            RDQHFFASIEKA  ELGW PE+ LV+GL DSYNLDFGRGTFRKAADF+TDD+ILGK  V
Sbjct: 316  RDQHFFASIEKATLELGWKPEYDLVEGLTDSYNLDFGRGTFRKAADFTTDDMILGKKLV 374



 Score =  238 bits (607), Expect(2) = e-152
 Identities = 119/164 (72%), Positives = 142/164 (86%), Gaps = 1/164 (0%)
 Frame = -3

Query: 1545 ASPWATPLAPSSLSEFHAAALDLSNIRKKRVWQKKGA-LRVAAGLSARKILIMGGTRFIG 1369
            AS  ++ L PS +S+F +AAL +S   ++R WQ +GA ++VAA   ++ IL+MGGTRFIG
Sbjct: 5    ASLKSSLLLPSPISDFSSAALSISTQARRRSWQPRGARMQVAAAADSKNILVMGGTRFIG 64

Query: 1368 VFLSRILVKDGHQVTLFTRGKAPITQQLPGESDQDYADFKSKILHLKGDRKDFEFVKTSL 1189
            VFLSR+LVK+GHQVTLFTRGKAPITQQLPGESD +YA+F SK+LHLKGDR+DF+FVKTSL
Sbjct: 65   VFLSRLLVKEGHQVTLFTRGKAPITQQLPGESDAEYAEFSSKVLHLKGDRQDFDFVKTSL 124

Query: 1188 AAEGFDVVYDINGREADEVKPILDALPKLEQFIYCSSAGVYLKS 1057
            AA+GFDVVYDINGREA EV PILDALP LEQ+IYCSSAGVYLKS
Sbjct: 125  AAKGFDVVYDINGREAVEVAPILDALPNLEQYIYCSSAGVYLKS 168


>ref|XP_006604786.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa b,
            chloroplastic-like isoform X2 [Glycine max]
          Length = 376

 Score =  335 bits (860), Expect(2) = e-152
 Identities = 155/176 (88%), Positives = 168/176 (95%)
 Frame = -2

Query: 1045 SRGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLARAFV 866
            +RGVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP+SG+QITQLGHVKDLA AF+
Sbjct: 199  ARGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPSSGLQITQLGHVKDLATAFI 258

Query: 865  TVLGNPKASKQVYNISGSKYVTFDGLARACAKAAGFPEPEIVHYNPKEFDFGKKKAFPFR 686
             VLGN KASK+V+NISG KYVTFDGLARACAKA GFPEPEI+HYNPK+FDFGKKK+FPFR
Sbjct: 259  QVLGNEKASKEVFNISGEKYVTFDGLARACAKAGGFPEPEIIHYNPKDFDFGKKKSFPFR 318

Query: 685  DQHFFASIEKAQRELGWTPEFGLVDGLADSYNLDFGRGTFRKAADFSTDDIILGKS 518
            DQHFFASIEKA+R LGW PEFGLV+GLADSYNLDFGRGT+RK ADFSTDDIILGKS
Sbjct: 319  DQHFFASIEKAKRVLGWEPEFGLVEGLADSYNLDFGRGTYRKEADFSTDDIILGKS 374



 Score =  231 bits (590), Expect(2) = e-152
 Identities = 120/158 (75%), Positives = 135/158 (85%)
 Frame = -3

Query: 1530 TPLAPSSLSEFHAAALDLSNIRKKRVWQKKGALRVAAGLSARKILIMGGTRFIGVFLSRI 1351
            +PLA SSL +F    L      K+++   KG+  V+A  S +KILIMGGTRFIGVFLSR+
Sbjct: 15   SPLA-SSLFDFSGTRLQTQLQFKRKLCHPKGSFYVSAS-STKKILIMGGTRFIGVFLSRL 72

Query: 1350 LVKDGHQVTLFTRGKAPITQQLPGESDQDYADFKSKILHLKGDRKDFEFVKTSLAAEGFD 1171
            LVK+GHQVTLFTRGKAP+TQQLPGESD DYADF SKILHLKGDRKDF+FVK+SL+AEGFD
Sbjct: 73   LVKEGHQVTLFTRGKAPVTQQLPGESDNDYADFSSKILHLKGDRKDFDFVKSSLSAEGFD 132

Query: 1170 VVYDINGREADEVKPILDALPKLEQFIYCSSAGVYLKS 1057
            VVYDINGREADEV+PILDALP LEQFIYCSSAGVYLKS
Sbjct: 133  VVYDINGREADEVEPILDALPNLEQFIYCSSAGVYLKS 170


>ref|XP_004241412.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa b,
            chloroplastic-like [Solanum lycopersicum]
          Length = 379

 Score =  332 bits (851), Expect(2) = e-151
 Identities = 156/181 (86%), Positives = 167/181 (92%)
 Frame = -2

Query: 1045 SRGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLARAFV 866
            SR VNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSG+QITQLGHVKDLA+AFV
Sbjct: 199  SRDVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGMQITQLGHVKDLAKAFV 258

Query: 865  TVLGNPKASKQVYNISGSKYVTFDGLARACAKAAGFPEPEIVHYNPKEFDFGKKKAFPFR 686
             VLGN KASKQV+NISG KYVTFDGLA+ACAKA GFPEPE+VHYNPKEFDFGKKKAFPFR
Sbjct: 259  QVLGNEKASKQVFNISGEKYVTFDGLAKACAKAGGFPEPELVHYNPKEFDFGKKKAFPFR 318

Query: 685  DQHFFASIEKAQRELGWTPEFGLVDGLADSYNLDFGRGTFRKAADFSTDDIILGKSFVLQ 506
            DQHFF SIEK++ ELGW P+F LV+GL DSYNLDFGRGTFRKAADFSTDD+IL K  V Q
Sbjct: 319  DQHFFTSIEKSKAELGWKPDFDLVEGLTDSYNLDFGRGTFRKAADFSTDDMILEKKLVPQ 378

Query: 505  T 503
            +
Sbjct: 379  S 379



 Score =  232 bits (592), Expect(2) = e-151
 Identities = 123/167 (73%), Positives = 140/167 (83%)
 Frame = -3

Query: 1557 QPKQASPWATPLAPSSLSEFHAAALDLSNIRKKRVWQKKGALRVAAGLSARKILIMGGTR 1378
            QPKQ S     L PSS S+F+ A L  S   K++    KGAL+V A  S +KILIMGGTR
Sbjct: 8    QPKQPS---FSLLPSSNSDFNGARLISSFQYKRKPCLSKGALQVTAS-SEKKILIMGGTR 63

Query: 1377 FIGVFLSRILVKDGHQVTLFTRGKAPITQQLPGESDQDYADFKSKILHLKGDRKDFEFVK 1198
            FIGVFLSR+LVK+GHQVTLFTRGKAPI+QQLPGESDQDYADF SK+LHLKGDR DF+FVK
Sbjct: 64   FIGVFLSRLLVKEGHQVTLFTRGKAPISQQLPGESDQDYADFSSKLLHLKGDRMDFDFVK 123

Query: 1197 TSLAAEGFDVVYDINGREADEVKPILDALPKLEQFIYCSSAGVYLKS 1057
            +SL+AEG+DVVYDINGREA EV+PILDALP LEQ+IYCSSAGVYLK+
Sbjct: 124  SSLSAEGYDVVYDINGREATEVEPILDALPNLEQYIYCSSAGVYLKT 170


>ref|XP_006305088.1| hypothetical protein CARUB_v10009455mg [Capsella rubella]
            gi|482573799|gb|EOA37986.1| hypothetical protein
            CARUB_v10009455mg [Capsella rubella]
          Length = 379

 Score =  330 bits (847), Expect(2) = e-151
 Identities = 152/181 (83%), Positives = 167/181 (92%)
 Frame = -2

Query: 1045 SRGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLARAFV 866
            S+GVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIP+PNSGIQI+QLGHVKDLA AF+
Sbjct: 199  SKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVPNSGIQISQLGHVKDLATAFL 258

Query: 865  TVLGNPKASKQVYNISGSKYVTFDGLARACAKAAGFPEPEIVHYNPKEFDFGKKKAFPFR 686
             VLGN KAS++++NISG KYVTFDGLARACAKA GFPEPEIVHYNPKEFDFGKKKAFPFR
Sbjct: 259  KVLGNEKASREIFNISGEKYVTFDGLARACAKAGGFPEPEIVHYNPKEFDFGKKKAFPFR 318

Query: 685  DQHFFASIEKAQRELGWTPEFGLVDGLADSYNLDFGRGTFRKAADFSTDDIILGKSFVLQ 506
            DQHFFAS+EKA+  LGW PEF LV+GL DSYNLDFGRGTFRK ADF+TDD+IL K  VLQ
Sbjct: 319  DQHFFASVEKAKHVLGWKPEFDLVEGLTDSYNLDFGRGTFRKEADFTTDDMILSKKLVLQ 378

Query: 505  T 503
            +
Sbjct: 379  S 379



 Score =  234 bits (596), Expect(2) = e-151
 Identities = 119/156 (76%), Positives = 138/156 (88%)
 Frame = -3

Query: 1524 LAPSSLSEFHAAALDLSNIRKKRVWQKKGALRVAAGLSARKILIMGGTRFIGVFLSRILV 1345
            L  SSLS+F+ A L L    K++V Q KGAL V+A  S +KILIMGGTRFIGVFLSR+LV
Sbjct: 16   LLNSSLSDFNGAKLHLQVQYKRKVHQPKGALYVSAS-SEKKILIMGGTRFIGVFLSRLLV 74

Query: 1344 KDGHQVTLFTRGKAPITQQLPGESDQDYADFKSKILHLKGDRKDFEFVKTSLAAEGFDVV 1165
            K+GHQVTLFTRGK PI +QLPGESDQD+ADF SKILHLKGDRKD++FVK+SL+AEGFDVV
Sbjct: 75   KEGHQVTLFTRGKTPIAKQLPGESDQDFADFSSKILHLKGDRKDYDFVKSSLSAEGFDVV 134

Query: 1164 YDINGREADEVKPILDALPKLEQFIYCSSAGVYLKS 1057
            YDINGREA+EV+PI++ALPKLEQ+IYCSSAGVYLKS
Sbjct: 135  YDINGREAEEVEPIIEALPKLEQYIYCSSAGVYLKS 170


>ref|NP_172405.1| chloroplast stem-loop binding protein [Arabidopsis thaliana]
            gi|75313128|sp|Q9SA52.1|CP41B_ARATH RecName:
            Full=Chloroplast stem-loop binding protein of 41 kDa b,
            chloroplastic; Short=CSP41-b; AltName:
            Full=Heteroglycan-interacting protein 1.3; AltName:
            Full=Protein CHLOROPLAST RNA BINDING; AltName:
            Full=Protein Gb5f; Flags: Precursor
            gi|11762234|gb|AAG40395.1|AF325043_1 At1g09340
            [Arabidopsis thaliana]
            gi|16226247|gb|AAL16114.1|AF428282_1 At1g09340/T31J12_6
            [Arabidopsis thaliana] gi|4337177|gb|AAD18098.1|
            Identical to gb|Y10557 g5bf gene from Arabidopsis
            thaliana. ESTs gb|R30578, gb|R90475, gb|T22384,
            gb|T22425, gb|N64934 and gb|T46767 come from this gene
            [Arabidopsis thaliana] gi|14334754|gb|AAK59555.1|
            putative RNA-binding protein [Arabidopsis thaliana]
            gi|17979099|gb|AAL47493.1| putative RNA-binding protein
            [Arabidopsis thaliana] gi|332190310|gb|AEE28431.1|
            chloroplast stem-loop binding protein [Arabidopsis
            thaliana]
          Length = 378

 Score =  329 bits (844), Expect(2) = e-151
 Identities = 151/180 (83%), Positives = 166/180 (92%)
 Frame = -2

Query: 1045 SRGVNWTSLRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQITQLGHVKDLARAFV 866
            S+GVNWTS+RPVYIYGPLNYNPVEEWFFHRLKAGRPIP+PNSGIQI+QLGHVKDLA AF+
Sbjct: 199  SKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVPNSGIQISQLGHVKDLATAFL 258

Query: 865  TVLGNPKASKQVYNISGSKYVTFDGLARACAKAAGFPEPEIVHYNPKEFDFGKKKAFPFR 686
             VLGN KAS++++NISG KYVTFDGLA+ACAKA GFPEPEIVHYNPKEFDFGKKKAFPFR
Sbjct: 259  NVLGNEKASREIFNISGEKYVTFDGLAKACAKAGGFPEPEIVHYNPKEFDFGKKKAFPFR 318

Query: 685  DQHFFASIEKAQRELGWTPEFGLVDGLADSYNLDFGRGTFRKAADFSTDDIILGKSFVLQ 506
            DQHFFAS+EKA+  LGW PEF LV+GL DSYNLDFGRGTFRK ADF+TDD+IL K  VLQ
Sbjct: 319  DQHFFASVEKAKHVLGWKPEFDLVEGLTDSYNLDFGRGTFRKEADFTTDDMILSKKLVLQ 378



 Score =  235 bits (599), Expect(2) = e-151
 Identities = 120/156 (76%), Positives = 139/156 (89%)
 Frame = -3

Query: 1524 LAPSSLSEFHAAALDLSNIRKKRVWQKKGALRVAAGLSARKILIMGGTRFIGVFLSRILV 1345
            L  SSLS+F+ A L L    K++V Q KGAL V+A  S +KILIMGGTRFIG+FLSRILV
Sbjct: 16   LLTSSLSDFNGAKLHLQVQYKRKVHQPKGALYVSAS-SEKKILIMGGTRFIGLFLSRILV 74

Query: 1344 KDGHQVTLFTRGKAPITQQLPGESDQDYADFKSKILHLKGDRKDFEFVKTSLAAEGFDVV 1165
            K+GHQVTLFTRGK+PI +QLPGESDQD+ADF SKILHLKGDRKD++FVK+SL+AEGFDVV
Sbjct: 75   KEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKDYDFVKSSLSAEGFDVV 134

Query: 1164 YDINGREADEVKPILDALPKLEQFIYCSSAGVYLKS 1057
            YDINGREA+EV+PIL+ALPKLEQ+IYCSSAGVYLKS
Sbjct: 135  YDINGREAEEVEPILEALPKLEQYIYCSSAGVYLKS 170