BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00003459
         (1969 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAC20900.1| short-root protein-like [Oryza sativa Japonica G...   509   e-141
ref|NP_001060133.1| Os07g0586900 [Oryza sativa Japonica Group] g...   509   e-141
ref|NP_001169599.1| hypothetical protein [Zea mays] gi|224030299...   508   e-141
gb|ACN33432.1| unknown [Zea mays]                                     507   e-141
sp|A2YN56.1|SHR1_ORYSI RecName: Full=Protein SHORT-ROOT 1; AltNa...   506   e-140
ref|XP_004958171.1| PREDICTED: protein SHORT-ROOT 1-like [Setari...   504   e-140
tpg|DAA41268.1| TPA: hypothetical protein ZEAMMB73_913831 [Zea m...   504   e-140
ref|XP_002460941.1| hypothetical protein SORBIDRAFT_02g037890 [S...   501   e-139
ref|XP_004983931.1| PREDICTED: protein SHORT-ROOT 2-like [Setari...   495   e-137
dbj|BAK02177.1| predicted protein [Hordeum vulgare subsp. vulgare]    495   e-137
ref|XP_002467655.1| hypothetical protein SORBIDRAFT_01g031720 [S...   493   e-137
tpg|DAA45910.1| TPA: hypothetical protein ZEAMMB73_781034 [Zea m...   488   e-135
ref|XP_003562791.1| PREDICTED: protein SHORT-ROOT 1-like [Brachy...   487   e-135
sp|A2XIA8.1|SHR2_ORYSI RecName: Full=Protein SHORT-ROOT 2; AltNa...   483   e-133
ref|NP_001173487.1| Os03g0433200 [Oryza sativa Japonica Group] g...   483   e-133
gb|EEE67495.1| hypothetical protein OsJ_24926 [Oryza sativa Japo...   466   e-128
gb|EEE59318.1| hypothetical protein OsJ_11379 [Oryza sativa Japo...   451   e-124
ref|XP_004231927.1| PREDICTED: protein SHORT-ROOT-like [Solanum ...   424   e-116
ref|XP_003517347.1| PREDICTED: protein SHORT-ROOT-like [Glycine ...   417   e-114
ref|XP_003611578.1| GRAS family transcription factor [Medicago t...   416   e-113

>dbj|BAC20900.1| short-root protein-like [Oryza sativa Japonica Group]
            gi|50509213|dbj|BAD30442.1| short-root protein-like
            [Oryza sativa Japonica Group]
          Length = 629

 Score =  509 bits (1312), Expect = e-141
 Identities = 292/534 (54%), Positives = 337/534 (63%), Gaps = 60/534 (11%)
 Frame = +2

Query: 302  EQPNYSFPHQDPYSHRDQECGT-DHRDLYMDEDFXXXXXXKHLGH-------RPPATSTP 457
            + P   + + +PY    +ECG   H  LYMDEDF      +H  H       +PPA+STP
Sbjct: 99   QPPPSQYYYLEPYQ---EECGNAPHHQLYMDEDFSSSSSSRHFHHGARVQQQQPPASSTP 155

Query: 458  ---------------------VFDPXXXXX--DLNLDIFXXXXXXXXXXXXXX----DGG 556
                                 +F+        DLNLD                     GG
Sbjct: 156  TGTAPTPPLSTSSTAAGAGHGLFEAADLSFPPDLNLDFSSPASSSGGGTASSGAVGGGGG 215

Query: 557  GRWASKLLLECARAVAARDTQRAQHLTWMLNELASPYGDAEQKVAAYFLQGLFARLTSSG 736
            GRWAS+LLLECAR+VAARD+QR Q L WMLNELASPYGD EQK+A+YFLQGLFARLT+SG
Sbjct: 216  GRWASQLLLECARSVAARDSQRVQQLMWMLNELASPYGDVEQKLASYFLQGLFARLTASG 275

Query: 737  PRTLRTLTGASDRNCSFESARRTALRFQEVSPWSSFGHVAANGAILEAFLE------ETP 898
            PRTLRTL  ASDRN SF+S RRTALRFQE+SPWSSFGHVAANGAILE+FLE         
Sbjct: 276  PRTLRTLAAASDRNTSFDSTRRTALRFQELSPWSSFGHVAANGAILESFLEVAAAASSET 335

Query: 899  QRLHILDLSTTFCTQWPTLLEALATRSADDTPHLTITTVAAASSS-----MQRVMKEIGQ 1063
            QR HILDLS TFCTQWPTLLEALATRSAD+TPHL+ITTV +A+ S     +QRVM+EIGQ
Sbjct: 336  QRFHILDLSNTFCTQWPTLLEALATRSADETPHLSITTVVSAAPSAPTAAVQRVMREIGQ 395

Query: 1064 RMEKFARLMGVPFRFNVVHHPXXXXXXXXXXXXXXXXXXXXXXAVNCVNALHAISPS-GR 1240
            RMEKFARLMGVPFRF  VHH                       AVNCVN+L  + P   R
Sbjct: 396  RMEKFARLMGVPFRFRAVHHSGDLAELDLDALDLREGGATTALAVNCVNSLRGVVPGRAR 455

Query: 1241 RRDGFLAAIRRLRPRIVTVVEEEADLASSE-----APEEG----EAFVKVFEESLRFFTA 1393
            RRD F A++RRL PR+VTVVEEEADL +S+     A EEG     AF+KVF E LRFF+A
Sbjct: 456  RRDAFAASLRRLDPRVVTVVEEEADLVASDPDASSATEEGGDTEAAFLKVFGEGLRFFSA 515

Query: 1394 YLESLEESFPRASNXXXXXXXXXXXXVVDLVSCXXXXXXXXXXXXXXXXXXMRTAGFAPA 1573
            Y++SLEESFP+ SN            +VDLVSC                  MR+AGF+P 
Sbjct: 516  YMDSLEESFPKTSNERLALERGAGRAIVDLVSCPASESMERRETAASWARRMRSAGFSPV 575

Query: 1574 AFSEDVTDDVRALLRRYREGWSMRAPAADE----AGVFLEWREQAVVWASAWKP 1723
            AFSEDV DDVR+LLRRYREGWSMR    D+    AGVFL W+EQ +VWASAW+P
Sbjct: 576  AFSEDVADDVRSLLRRYREGWSMREAGTDDSAAGAGVFLAWKEQPLVWASAWRP 629


>ref|NP_001060133.1| Os07g0586900 [Oryza sativa Japonica Group]
            gi|182691590|sp|Q8H2X8.2|SHR1_ORYSJ RecName: Full=Protein
            SHORT-ROOT 1; AltName: Full=OsSHR1
            gi|113611669|dbj|BAF22047.1| Os07g0586900 [Oryza sativa
            Japonica Group] gi|215768016|dbj|BAH00245.1| unnamed
            protein product [Oryza sativa Japonica Group]
          Length = 602

 Score =  509 bits (1312), Expect = e-141
 Identities = 292/534 (54%), Positives = 337/534 (63%), Gaps = 60/534 (11%)
 Frame = +2

Query: 302  EQPNYSFPHQDPYSHRDQECGT-DHRDLYMDEDFXXXXXXKHLGH-------RPPATSTP 457
            + P   + + +PY    +ECG   H  LYMDEDF      +H  H       +PPA+STP
Sbjct: 72   QPPPSQYYYLEPYQ---EECGNAPHHQLYMDEDFSSSSSSRHFHHGARVQQQQPPASSTP 128

Query: 458  ---------------------VFDPXXXXX--DLNLDIFXXXXXXXXXXXXXX----DGG 556
                                 +F+        DLNLD                     GG
Sbjct: 129  TGTAPTPPLSTSSTAAGAGHGLFEAADLSFPPDLNLDFSSPASSSGGGTASSGAVGGGGG 188

Query: 557  GRWASKLLLECARAVAARDTQRAQHLTWMLNELASPYGDAEQKVAAYFLQGLFARLTSSG 736
            GRWAS+LLLECAR+VAARD+QR Q L WMLNELASPYGD EQK+A+YFLQGLFARLT+SG
Sbjct: 189  GRWASQLLLECARSVAARDSQRVQQLMWMLNELASPYGDVEQKLASYFLQGLFARLTASG 248

Query: 737  PRTLRTLTGASDRNCSFESARRTALRFQEVSPWSSFGHVAANGAILEAFLE------ETP 898
            PRTLRTL  ASDRN SF+S RRTALRFQE+SPWSSFGHVAANGAILE+FLE         
Sbjct: 249  PRTLRTLAAASDRNTSFDSTRRTALRFQELSPWSSFGHVAANGAILESFLEVAAAASSET 308

Query: 899  QRLHILDLSTTFCTQWPTLLEALATRSADDTPHLTITTVAAASSS-----MQRVMKEIGQ 1063
            QR HILDLS TFCTQWPTLLEALATRSAD+TPHL+ITTV +A+ S     +QRVM+EIGQ
Sbjct: 309  QRFHILDLSNTFCTQWPTLLEALATRSADETPHLSITTVVSAAPSAPTAAVQRVMREIGQ 368

Query: 1064 RMEKFARLMGVPFRFNVVHHPXXXXXXXXXXXXXXXXXXXXXXAVNCVNALHAISPS-GR 1240
            RMEKFARLMGVPFRF  VHH                       AVNCVN+L  + P   R
Sbjct: 369  RMEKFARLMGVPFRFRAVHHSGDLAELDLDALDLREGGATTALAVNCVNSLRGVVPGRAR 428

Query: 1241 RRDGFLAAIRRLRPRIVTVVEEEADLASSE-----APEEG----EAFVKVFEESLRFFTA 1393
            RRD F A++RRL PR+VTVVEEEADL +S+     A EEG     AF+KVF E LRFF+A
Sbjct: 429  RRDAFAASLRRLDPRVVTVVEEEADLVASDPDASSATEEGGDTEAAFLKVFGEGLRFFSA 488

Query: 1394 YLESLEESFPRASNXXXXXXXXXXXXVVDLVSCXXXXXXXXXXXXXXXXXXMRTAGFAPA 1573
            Y++SLEESFP+ SN            +VDLVSC                  MR+AGF+P 
Sbjct: 489  YMDSLEESFPKTSNERLALERGAGRAIVDLVSCPASESMERRETAASWARRMRSAGFSPV 548

Query: 1574 AFSEDVTDDVRALLRRYREGWSMRAPAADE----AGVFLEWREQAVVWASAWKP 1723
            AFSEDV DDVR+LLRRYREGWSMR    D+    AGVFL W+EQ +VWASAW+P
Sbjct: 549  AFSEDVADDVRSLLRRYREGWSMREAGTDDSAAGAGVFLAWKEQPLVWASAWRP 602


>ref|NP_001169599.1| hypothetical protein [Zea mays] gi|224030299|gb|ACN34225.1| unknown
            [Zea mays] gi|414887363|tpg|DAA63377.1| TPA: hypothetical
            protein ZEAMMB73_763916 [Zea mays]
          Length = 592

 Score =  508 bits (1309), Expect = e-141
 Identities = 291/533 (54%), Positives = 338/533 (63%), Gaps = 56/533 (10%)
 Frame = +2

Query: 293  YYLEQPNYSFPHQDPY--SHRDQECGTDHRDLYMDEDFXXXXXXKHLGH------RPPAT 448
            YY +Q  +   HQ  Y   ++ +ECG  H  LYMDEDF      +   H      +PP +
Sbjct: 61   YYGQQHPHQHQHQQYYLEPYQQEECGNTHH-LYMDEDFSSSSSSRQHFHSHGAVVQPPTS 119

Query: 449  STP---------------------VFDPXXXXX--DLNLDIFXXXXXXXXXXXXXX---- 547
            ST                      +F+        DLNLD                    
Sbjct: 120  STATPTAPTPSLSTSSTAAGAAHALFEAADLSFPPDLNLDFSSPASSSGGGAASSAAVGG 179

Query: 548  DGGGRWASKLLLECARAVAARDTQRAQHLTWMLNELASPYGDAEQKVAAYFLQGLFARLT 727
             GGGRWAS+LLLECARAVA RD+QR Q L WMLNELASPYGD EQK+A+YFLQGLFARLT
Sbjct: 180  GGGGRWASQLLLECARAVAGRDSQRVQQLMWMLNELASPYGDVEQKLASYFLQGLFARLT 239

Query: 728  SSGPRTLRTLTGASDRNCSFESARRTALRFQEVSPWSSFGHVAANGAILEAFLEET---- 895
            +SGPRTLRTL  ASDRN SF+S RRTALRFQE+SPWSSFGHVAANGAILE+FLE      
Sbjct: 240  ASGPRTLRTLAAASDRNTSFDSTRRTALRFQELSPWSSFGHVAANGAILESFLEAAAASP 299

Query: 896  -PQRLHILDLSTTFCTQWPTLLEALATRSADDTPHLTITTV-----AAASSSMQRVMKEI 1057
             PQRLHILDLS TFCTQWPTLLEALATRSADDTPHL+ITTV     +A ++++QRVM+EI
Sbjct: 300  EPQRLHILDLSNTFCTQWPTLLEALATRSADDTPHLSITTVVSSAPSAPTAAVQRVMREI 359

Query: 1058 GQRMEKFARLMGVPFRFNVVHHPXXXXXXXXXXXXXXXXXXXXXXAVNCVNALHAISPSG 1237
            GQRMEKFARLMGVPF F  VHH                       A+NCVN+L  + P G
Sbjct: 360  GQRMEKFARLMGVPFSFRAVHHAGDLAGLDLDALDLRDGGATTALAINCVNSLRGVVPGG 419

Query: 1238 -RRRDGFLAAIRRLRPRIVTVVEEEADLASSE--APEEG----EAFVKVFEESLRFFTAY 1396
             RRRD F A++RRL PR+VTVVEEEADL + +  APEE      AF+KVF E LRFF+AY
Sbjct: 420  ARRRDAFAASLRRLDPRVVTVVEEEADLVAFDPGAPEESGDTEAAFLKVFGEGLRFFSAY 479

Query: 1397 LESLEESFPRASNXXXXXXXXXXXXVVDLVSCXXXXXXXXXXXXXXXXXXMRTAGFAPAA 1576
            ++SLEESFP+ SN            +VDLVSC                  MR++GF+P A
Sbjct: 480  MDSLEESFPKTSNERLALERGAGRAIVDLVSCPASESMERRETAASWARRMRSSGFSPVA 539

Query: 1577 FSEDVTDDVRALLRRYREGWSMRAPAADE----AGVFLEWREQAVVWASAWKP 1723
            FSEDV DDVR+LLRRYREGWSMR    D+    AGVFL W+EQ +VWASAW+P
Sbjct: 540  FSEDVADDVRSLLRRYREGWSMRDAGLDDSAAGAGVFLAWKEQPLVWASAWRP 592


>gb|ACN33432.1| unknown [Zea mays]
          Length = 592

 Score =  507 bits (1305), Expect = e-141
 Identities = 290/533 (54%), Positives = 338/533 (63%), Gaps = 56/533 (10%)
 Frame = +2

Query: 293  YYLEQPNYSFPHQDPY--SHRDQECGTDHRDLYMDEDFXXXXXXKHLGH------RPPAT 448
            YY +Q  +   HQ  Y   ++ +ECG  H  LYMDEDF      +   H      +PP +
Sbjct: 61   YYGQQHPHQHQHQQYYLEPYQQEECGNTHH-LYMDEDFSSSSSSRQHFHSHGAVVQPPTS 119

Query: 449  STP---------------------VFDPXXXXX--DLNLDIFXXXXXXXXXXXXXX---- 547
            ST                      +F+        DLNLD                    
Sbjct: 120  STATPTAPTPSLSTSSTAAGAAHALFEAADLSFPPDLNLDFSSPASSSGGGAASSAAVGG 179

Query: 548  DGGGRWASKLLLECARAVAARDTQRAQHLTWMLNELASPYGDAEQKVAAYFLQGLFARLT 727
             GGGRWAS+LLL+CARAVA RD+QR Q L WMLNELASPYGD EQK+A+YFLQGLFARLT
Sbjct: 180  GGGGRWASQLLLKCARAVAGRDSQRVQQLMWMLNELASPYGDVEQKLASYFLQGLFARLT 239

Query: 728  SSGPRTLRTLTGASDRNCSFESARRTALRFQEVSPWSSFGHVAANGAILEAFLEET---- 895
            +SGPRTLRTL  ASDRN SF+S RRTALRFQE+SPWSSFGHVAANGAILE+FLE      
Sbjct: 240  ASGPRTLRTLAAASDRNTSFDSTRRTALRFQELSPWSSFGHVAANGAILESFLEAAAASP 299

Query: 896  -PQRLHILDLSTTFCTQWPTLLEALATRSADDTPHLTITTV-----AAASSSMQRVMKEI 1057
             PQRLHILDLS TFCTQWPTLLEALATRSADDTPHL+ITTV     +A ++++QRVM+EI
Sbjct: 300  EPQRLHILDLSNTFCTQWPTLLEALATRSADDTPHLSITTVVSSAPSAPTAAVQRVMREI 359

Query: 1058 GQRMEKFARLMGVPFRFNVVHHPXXXXXXXXXXXXXXXXXXXXXXAVNCVNALHAISPSG 1237
            GQRMEKFARLMGVPF F  VHH                       A+NCVN+L  + P G
Sbjct: 360  GQRMEKFARLMGVPFSFRAVHHAGDLAGLDLDALDLRDGGATTALAINCVNSLRGVVPGG 419

Query: 1238 -RRRDGFLAAIRRLRPRIVTVVEEEADLASSE--APEEG----EAFVKVFEESLRFFTAY 1396
             RRRD F A++RRL PR+VTVVEEEADL + +  APEE      AF+KVF E LRFF+AY
Sbjct: 420  ARRRDAFAASLRRLDPRVVTVVEEEADLVAFDPGAPEESGDTEAAFLKVFGEGLRFFSAY 479

Query: 1397 LESLEESFPRASNXXXXXXXXXXXXVVDLVSCXXXXXXXXXXXXXXXXXXMRTAGFAPAA 1576
            ++SLEESFP+ SN            +VDLVSC                  MR++GF+P A
Sbjct: 480  MDSLEESFPKTSNERLALERGAGRAIVDLVSCPASESMERRETAASWARRMRSSGFSPVA 539

Query: 1577 FSEDVTDDVRALLRRYREGWSMRAPAADE----AGVFLEWREQAVVWASAWKP 1723
            FSEDV DDVR+LLRRYREGWSMR    D+    AGVFL W+EQ +VWASAW+P
Sbjct: 540  FSEDVADDVRSLLRRYREGWSMRDAGLDDSAAGAGVFLAWKEQPLVWASAWRP 592


>sp|A2YN56.1|SHR1_ORYSI RecName: Full=Protein SHORT-ROOT 1; AltName: Full=OsSHR1
            gi|125558981|gb|EAZ04517.1| hypothetical protein
            OsI_26668 [Oryza sativa Indica Group]
          Length = 602

 Score =  506 bits (1304), Expect = e-140
 Identities = 291/534 (54%), Positives = 336/534 (62%), Gaps = 60/534 (11%)
 Frame = +2

Query: 302  EQPNYSFPHQDPYSHRDQECGT-DHRDLYMDEDFXXXXXXKHLGH-------RPPATSTP 457
            + P   + + +PY    +ECG   H  LYMDEDF      +H  H       +PPA+STP
Sbjct: 72   QPPPSQYYYLEPYQ---EECGNAPHHQLYMDEDFSSSSSSRHFHHGAPVQQQQPPASSTP 128

Query: 458  ---------------------VFDPXXXXX--DLNLDIFXXXXXXXXXXXXXX----DGG 556
                                 +F+        DLNLD                     GG
Sbjct: 129  TGTAPTPPLSTSSTAAGAGHGLFEAADLSFPPDLNLDFSSPASSSGGGTASSGAVGGGGG 188

Query: 557  GRWASKLLLECARAVAARDTQRAQHLTWMLNELASPYGDAEQKVAAYFLQGLFARLTSSG 736
            GRWAS+LLLECAR+VAARD+QR Q L WMLNELASPYGD EQK+A+YFLQGLFARLT+SG
Sbjct: 189  GRWASQLLLECARSVAARDSQRVQQLMWMLNELASPYGDVEQKLASYFLQGLFARLTASG 248

Query: 737  PRTLRTLTGASDRNCSFESARRTALRFQEVSPWSSFGHVAANGAILEAFLE------ETP 898
             RTLRTL  ASDRN SF+S RRTALRFQE+SPWSSFGHVAANGAILE+FLE         
Sbjct: 249  QRTLRTLAAASDRNTSFDSTRRTALRFQELSPWSSFGHVAANGAILESFLEVAAAASSET 308

Query: 899  QRLHILDLSTTFCTQWPTLLEALATRSADDTPHLTITTVAAASSS-----MQRVMKEIGQ 1063
            QR HILDLS TFCTQWPTLLEALATRSAD+TPHL+ITTV +A+ S     +QRVM+EIGQ
Sbjct: 309  QRFHILDLSNTFCTQWPTLLEALATRSADETPHLSITTVVSAAPSAPTAAVQRVMREIGQ 368

Query: 1064 RMEKFARLMGVPFRFNVVHHPXXXXXXXXXXXXXXXXXXXXXXAVNCVNALHAISPS-GR 1240
            RMEKFARLMGVPFRF  VHH                       AVNCVN+L  + P   R
Sbjct: 369  RMEKFARLMGVPFRFRAVHHSGDLAELDLDALDLREGGATTALAVNCVNSLRGVVPGRAR 428

Query: 1241 RRDGFLAAIRRLRPRIVTVVEEEADLASSE-----APEEG----EAFVKVFEESLRFFTA 1393
            RRD F A++RRL PR+VTVVEEEADL +S+     A EEG     AF+KVF E LRFF+A
Sbjct: 429  RRDAFAASLRRLDPRVVTVVEEEADLVASDPDASSATEEGGDTEAAFLKVFGEGLRFFSA 488

Query: 1394 YLESLEESFPRASNXXXXXXXXXXXXVVDLVSCXXXXXXXXXXXXXXXXXXMRTAGFAPA 1573
            Y++SLEESFP+ SN            +VDLVSC                  MR+AGF+P 
Sbjct: 489  YMDSLEESFPKTSNERLALERGAGRAIVDLVSCPASESMERRETAASWARRMRSAGFSPV 548

Query: 1574 AFSEDVTDDVRALLRRYREGWSMRAPAADE----AGVFLEWREQAVVWASAWKP 1723
            AFSEDV DDVR+LLRRYREGWSMR    D+    AGVFL W+EQ +VWASAW+P
Sbjct: 549  AFSEDVADDVRSLLRRYREGWSMREAGTDDSAAGAGVFLAWKEQPLVWASAWRP 602


>ref|XP_004958171.1| PREDICTED: protein SHORT-ROOT 1-like [Setaria italica]
          Length = 594

 Score =  504 bits (1299), Expect = e-140
 Identities = 291/530 (54%), Positives = 335/530 (63%), Gaps = 53/530 (10%)
 Frame = +2

Query: 293  YYLEQPNYSFPHQDPYSHRDQECGTDHRDLYMDEDFXXXXXXKHLGH------RPPATS- 451
            YY +Q  +   + +PY  + +ECG  H  LYMDEDF      +   H      +PP +S 
Sbjct: 68   YYGQQHQHQQYYLEPY--QQEECGNAHH-LYMDEDFSSSSSSRQHFHSHGAAVQPPTSSV 124

Query: 452  ----TPVFDPXXXXX----------------DLNLDIFXXXXXXXXXXXXXX----DGGG 559
                TP                         DLNLD                     G G
Sbjct: 125  TTAPTPPLSTSSTAAGAAHALFEAADLSFPPDLNLDFSSPASSSGGGAASSAAVGGGGSG 184

Query: 560  RWASKLLLECARAVAARDTQRAQHLTWMLNELASPYGDAEQKVAAYFLQGLFARLTSSGP 739
            RWAS+LLLECARAVAARD+QR Q L WMLNELASPYG+ EQK+A+YFLQGLFARLT+SGP
Sbjct: 185  RWASQLLLECARAVAARDSQRVQQLMWMLNELASPYGEVEQKLASYFLQGLFARLTASGP 244

Query: 740  RTLRTLTGASDRNCSFESARRTALRFQEVSPWSSFGHVAANGAILEAFLEET-----PQR 904
            RTLRTL  ASDRN SF+S RRTALRFQE+SPWSSFGHVAANGAILE+FLE       PQR
Sbjct: 245  RTLRTLAAASDRNTSFDSTRRTALRFQELSPWSSFGHVAANGAILESFLEAAAASPEPQR 304

Query: 905  LHILDLSTTFCTQWPTLLEALATRSADDTPHLTITTVAAASSS-----MQRVMKEIGQRM 1069
             HILDLS TFCTQWPTLLEALATRSADDTPHL+ITTV +A+ S     +QRVM+EIGQRM
Sbjct: 305  FHILDLSNTFCTQWPTLLEALATRSADDTPHLSITTVVSAAPSAPTAAVQRVMREIGQRM 364

Query: 1070 EKFARLMGVPFRFNVVHHPXXXXXXXXXXXXXXXXXXXXXXAVNCVNALHAISPSG-RRR 1246
            EKFARLMGVPF F  VHH                       AVNCVN+L  + P G RRR
Sbjct: 365  EKFARLMGVPFSFRAVHHAGDLAELDLDALDLRDGGASTALAVNCVNSLRGVVPGGARRR 424

Query: 1247 DGFLAAIRRLRPRIVTVVEEEADLASSE---APEEG----EAFVKVFEESLRFFTAYLES 1405
            D F +++RRL PR+VTVVEEEADL +S+   + EEG     AF+KVF E LRFF+AY++S
Sbjct: 425  DAFTSSLRRLDPRVVTVVEEEADLVASDPDTSSEEGGDSEAAFLKVFGEGLRFFSAYMDS 484

Query: 1406 LEESFPRASNXXXXXXXXXXXXVVDLVSCXXXXXXXXXXXXXXXXXXMRTAGFAPAAFSE 1585
            LEESFP+ SN            +VDLVSC                  MR+AGF+P AFSE
Sbjct: 485  LEESFPKTSNERLALERGAGRAIVDLVSCPASESMERRETAASWARRMRSAGFSPVAFSE 544

Query: 1586 DVTDDVRALLRRYREGWSMRAPAADE----AGVFLEWREQAVVWASAWKP 1723
            DV DDVR+LLRRYREGWSMR    D+    AGVFL W+EQ +VWASAWKP
Sbjct: 545  DVADDVRSLLRRYREGWSMRDAGLDDSAAGAGVFLAWKEQPLVWASAWKP 594


>tpg|DAA41268.1| TPA: hypothetical protein ZEAMMB73_913831 [Zea mays]
          Length = 586

 Score =  504 bits (1299), Expect = e-140
 Identities = 290/535 (54%), Positives = 334/535 (62%), Gaps = 58/535 (10%)
 Frame = +2

Query: 293  YYLEQPNYSFPHQDPYSHRDQECGTDHRDLYMDEDFXXXXXXKHLGHR-----PPATSTP 457
            YY  Q N  + +Q+PY  + +ECG  HR LYMDEDF      +   H       PATS+ 
Sbjct: 61   YYYGQQNQQY-YQEPY--QQEECGNAHR-LYMDEDFSSSSSSRQHFHSHGAAVQPATSSA 116

Query: 458  V-----------------------------FDPXXXXXDLNLDIFXXXXXXXXXXXXXXD 550
            V                             F P     DLNLD                 
Sbjct: 117  VTATAPTPPLSTSSTAAGAAHALFEAADLSFPP-----DLNLDFSSPASSSGGCVASSAA 171

Query: 551  GGGRWASKLLLECARAVAARDTQRAQHLTWMLNELASPYGDAEQKVAAYFLQGLFARLTS 730
             GGRWAS+LLLECARAVAARD+QR Q L WMLNELASPYGD EQK+A+YFLQGLFARLT+
Sbjct: 172  VGGRWASQLLLECARAVAARDSQRVQQLMWMLNELASPYGDVEQKLASYFLQGLFARLTA 231

Query: 731  SGPRTLRTLTGASDRNCSFESARRTALRFQEVSPWSSFGHVAANGAILEAFLE-----ET 895
            SGP+TLRTL  ASDRN SF+S RRTALRFQE+SPWSSFGHVAANGAILE+FLE       
Sbjct: 232  SGPQTLRTLAAASDRNTSFDSTRRTALRFQELSPWSSFGHVAANGAILESFLEAAAASSE 291

Query: 896  PQRLHILDLSTTFCTQWPTLLEALATRSADDTPHLTITTVAAASSS--------MQRVMK 1051
            PQR HILDLS TFCTQWPTLLEALATRS DDTPHL+ITTV +A+ S         QRVM+
Sbjct: 292  PQRFHILDLSNTFCTQWPTLLEALATRSTDDTPHLSITTVVSAAPSAPTVAVQRRQRVMR 351

Query: 1052 EIGQRMEKFARLMGVPFRFNVVHHPXXXXXXXXXXXXXXXXXXXXXXAVNCVNALHAISP 1231
            EIGQR+EKFARLMGVPF F  VHH                       A+NC+N+L  + P
Sbjct: 352  EIGQRIEKFARLMGVPFSFRAVHHAGDLAELDLDALDLRDGGATTALAINCLNSLRGVVP 411

Query: 1232 SG-RRRDGFLAAIRRLRPRIVTVVEEEADL------ASSEAPEEGEAFVKVFEESLRFFT 1390
             G RRRD F A++RRL PR+VTVVEEEADL      AS E+ +   AF+KVF E LRFF+
Sbjct: 412  GGVRRRDAFGASLRRLDPRVVTVVEEEADLVAFDPDASEESGDTEAAFLKVFGEGLRFFS 471

Query: 1391 AYLESLEESFPRASNXXXXXXXXXXXXVVDLVSCXXXXXXXXXXXXXXXXXXMRTAGFAP 1570
            AY++SLEESFP+ SN            +VDLVSC                  MR+AGF+P
Sbjct: 472  AYMDSLEESFPKTSNERLALERGAGRAIVDLVSCPPSKSMERRETAVSWARRMRSAGFSP 531

Query: 1571 AAFSEDVTDDVRALLRRYREGWSMRAPAADE----AGVFLEWREQAVVWASAWKP 1723
             AFSEDV DDVR+LLRRYREGWSMR    D+    AG+FL W+EQ +VWASAW+P
Sbjct: 532  VAFSEDVADDVRSLLRRYREGWSMRDTGLDDSAAGAGIFLAWKEQPLVWASAWRP 586


>ref|XP_002460941.1| hypothetical protein SORBIDRAFT_02g037890 [Sorghum bicolor]
            gi|241924318|gb|EER97462.1| hypothetical protein
            SORBIDRAFT_02g037890 [Sorghum bicolor]
          Length = 598

 Score =  501 bits (1291), Expect = e-139
 Identities = 291/535 (54%), Positives = 333/535 (62%), Gaps = 58/535 (10%)
 Frame = +2

Query: 293  YYLEQPNYSFPHQDPY--SHRDQECGTDHRDLYMDEDFXXXXXXKHLGH------RPPAT 448
            YY +Q  +   HQ  Y   ++ +ECG  H  LYMDEDF      +   H      +PP +
Sbjct: 67   YYGQQHQHQ--HQQYYLEPYQQEECGNAHH-LYMDEDFSSSSSSRQHFHSHGAAVQPPTS 123

Query: 449  S-------TPVFDPXXXXX----------------DLNLDIFXXXXXXXXXXXXXX---- 547
            S       TP                         DLNLD                    
Sbjct: 124  SAATPTAPTPPLSTSSTAAGAAHALFEAADLSFPPDLNLDFSSPASSSGGGAASSAAVGV 183

Query: 548  --DGGGRWASKLLLECARAVAARDTQRAQHLTWMLNELASPYGDAEQKVAAYFLQGLFAR 721
               GGGRWAS+LLLECARAVAARD+QR Q L WMLNELASPYGD EQK+A+YFLQGLFAR
Sbjct: 184  GGGGGGRWASQLLLECARAVAARDSQRVQQLMWMLNELASPYGDVEQKLASYFLQGLFAR 243

Query: 722  LTSSGPRTLRTLTGASDRNCSFESARRTALRFQEVSPWSSFGHVAANGAILEAFLE---- 889
            LT+SGPRTLRTL  ASDRN SF+S RRTALRFQE+SPWSSFGHVAANGAILE+FLE    
Sbjct: 244  LTASGPRTLRTLAAASDRNTSFDSTRRTALRFQELSPWSSFGHVAANGAILESFLEAAAA 303

Query: 890  -ETPQRLHILDLSTTFCTQWPTLLEALATRSADDTPHLTITTVAAASSS-----MQRVMK 1051
               PQR HILDLS TFCTQWPTLLEALATRSADDTPHL+ITTV +A+ S     +QRVM+
Sbjct: 304  SSEPQRFHILDLSNTFCTQWPTLLEALATRSADDTPHLSITTVVSAAPSAPTAAVQRVMR 363

Query: 1052 EIGQRMEKFARLMGVPFRFNVVHHPXXXXXXXXXXXXXXXXXXXXXXAVNCVNALHAISP 1231
            EIGQRMEKFARLMGVPF F  VHH                       AVNCVN+L  + P
Sbjct: 364  EIGQRMEKFARLMGVPFSFRAVHHAGDLAELDLDALDLRDGGATTALAVNCVNSLRGVVP 423

Query: 1232 -SGRRRDGFLAAIRRLRPRIVTVVEEEADL------ASSEAPEEGEAFVKVFEESLRFFT 1390
             + RRRD F A++RRL PR+VTVVEEEADL       S E+ +   AF+KVF E LRFF+
Sbjct: 424  GAARRRDAFAASLRRLDPRVVTVVEEEADLVAFDPDTSEESGDTEAAFLKVFGEGLRFFS 483

Query: 1391 AYLESLEESFPRASNXXXXXXXXXXXXVVDLVSCXXXXXXXXXXXXXXXXXXMRTAGFAP 1570
            AY++SLEESFP+ SN            +VDLVSC                  MR+AGF+P
Sbjct: 484  AYMDSLEESFPKTSNERLALERGAGRAIVDLVSCPASESMERRETAVSWARRMRSAGFSP 543

Query: 1571 AAFSEDVTDDVRALLRRYREGWSMRAPAADE----AGVFLEWREQAVVWASAWKP 1723
             AFSEDV DDVR+LLRRYREGWSMR    D+    AGVFL W+EQ +VWASAW+P
Sbjct: 544  VAFSEDVADDVRSLLRRYREGWSMRDAGLDDSAAGAGVFLAWKEQPLVWASAWRP 598


>ref|XP_004983931.1| PREDICTED: protein SHORT-ROOT 2-like [Setaria italica]
          Length = 635

 Score =  495 bits (1275), Expect = e-137
 Identities = 283/545 (51%), Positives = 331/545 (60%), Gaps = 68/545 (12%)
 Frame = +2

Query: 293  YYLEQPNYSFPHQDPYSHRDQECGTDHRDLYMDEDFXXXXXXKHLGHR------------ 436
            YY  QP    P+Q+       ECG DH   YMDEDF      +H  H+            
Sbjct: 101  YYDHQPAAPAPYQE-------ECGNDH-GFYMDEDFSSSSSSRHYHHQSSRAPPAAPSSS 152

Query: 437  PPATSTPVFDPXXXXX-------------------DLNLDIFXXXXXXXXXXXXXX---- 547
            PPA + P   P                        D++LD                    
Sbjct: 153  PPAPAPPTQPPSTSSGAGGHGGGLFEAADFSFPQVDIDLDFSSPATSSGAGGGGGTAASS 212

Query: 548  ---DGGGRWASKLLLECARAVAARDTQRAQHLTWMLNELASPYGDAEQKVAAYFLQGLFA 718
                G GRWA++LLL+CARAVAARD+QR Q L WMLNELASPYGD +QK+A+YFLQGLFA
Sbjct: 213  SGGGGAGRWAAQLLLQCARAVAARDSQRVQQLMWMLNELASPYGDVDQKLASYFLQGLFA 272

Query: 719  RLTSSGPRTLRTLTGASDRNCSFESARRTALRFQEVSPWSSFGHVAANGAILEAFLE--- 889
            RLT+SGPRTLRTL  ASDRN SFES RRTALRFQE+SPW+SFGHVAANGAILEAFLE   
Sbjct: 273  RLTTSGPRTLRTLAAASDRNTSFESTRRTALRFQELSPWASFGHVAANGAILEAFLEAAA 332

Query: 890  -----------ETPQRLHILDLSTTFCTQWPTLLEALATRSADDTPHLTITTV----AAA 1024
                         P RLHILDLS TFCTQWPTLLEALATRS+DDTPHL+ITTV    A +
Sbjct: 333  AAASSSSSSSSSQPPRLHILDLSNTFCTQWPTLLEALATRSSDDTPHLSITTVVPAAAPS 392

Query: 1025 SSSMQRVMKEIGQRMEKFARLMGVPFRFNVVHHPXXXXXXXXXXXXXXXXXXXXXXAVNC 1204
            S++ QRVM+EI QR+EKFARLMGVPF F  VHH                       A+NC
Sbjct: 393  SAAAQRVMREIAQRLEKFARLMGVPFSFRAVHH--AGDLAELDLDGLGLREGGAALAINC 450

Query: 1205 VNALHAISPSG-RRRDGFLAAIRRLRPRIVTVVEEEADL--------ASSEAPEEGEAFV 1357
            VNAL  ++P G R+RD FLA++RRL PR+VTVVEE+ADL        +S EA     AF+
Sbjct: 451  VNALRGVAPGGARQRDAFLASLRRLEPRVVTVVEEDADLVEPDPDASSSEEAASTEAAFI 510

Query: 1358 KVFEESLRFFTAYLESLEESFPRASNXXXXXXXXXXXXVVDLVSCXXXXXXXXXXXXXXX 1537
            KVF E LRFF+AY++SLEESFP+ SN            +VDLVSC               
Sbjct: 511  KVFTEGLRFFSAYMDSLEESFPKTSNERLVLERAAGRAIVDLVSCPASESAERRETGASW 570

Query: 1538 XXXMRTAGFAPAAFSEDVTDDVRALLRRYREGWSMRAPAADE---AGVFLEWREQAVVWA 1708
               MR+AGF+P AFS+DV DD+R+LLRRYREGWS+R P  D+   AGVFL W+EQ VVW 
Sbjct: 571  ARRMRSAGFSPVAFSDDVADDMRSLLRRYREGWSLREPGTDDGAAAGVFLAWKEQPVVWT 630

Query: 1709 SAWKP 1723
            SAW+P
Sbjct: 631  SAWRP 635


>dbj|BAK02177.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 597

 Score =  495 bits (1275), Expect = e-137
 Identities = 285/534 (53%), Positives = 331/534 (61%), Gaps = 57/534 (10%)
 Frame = +2

Query: 293  YYLEQPNYSFPHQDPYSHRDQECGTD--HRDLYMDEDFXXXXXXKHLGH-------RPPA 445
            Y  +QP  S+ + +PY    +ECG +     LYMDEDF      +   H       +PP 
Sbjct: 68   YSQQQPQQSY-YLEPYQ---EECGGNAHQHHLYMDEDFSSSSSSRQHFHSHGGAAGQPPT 123

Query: 446  TSTPVFDPXXXXX----------------------DLNLDIFXXXXXXXXXXXXXXD--- 550
            +S     P                           DLNLD                    
Sbjct: 124  SSATPTAPTPPLSTSSTAGGAGHALFEAADLSFPPDLNLDFSSPASSSGAGGTASSGAVG 183

Query: 551  --GGGRWASKLLLECARAVAARDTQRAQHLTWMLNELASPYGDAEQKVAAYFLQGLFARL 724
              GGGRWAS+LL+ECARAVA R++QR Q L WMLNELASPYGD EQK+A+YFLQGLFARL
Sbjct: 184  GGGGGRWASQLLMECARAVATRESQRVQQLMWMLNELASPYGDVEQKLASYFLQGLFARL 243

Query: 725  TSSGPRTLRTLTGASDRNCSFESARRTALRFQEVSPWSSFGHVAANGAILEAFLE----- 889
            T+SGPRTLRTL  A+DRN SF+S RRTALRFQE+SPWSSFGHVAANGAILE+FLE     
Sbjct: 244  TASGPRTLRTLAAATDRNTSFDSTRRTALRFQELSPWSSFGHVAANGAILESFLEAAAAS 303

Query: 890  ETPQRLHILDLSTTFCTQWPTLLEALATRSADDTPHLTITTVAAA-----SSSMQRVMKE 1054
              PQR HILDLS TFCTQWPTLLEALATRS DDTPHL+ITTV +A     +S++QRVM+E
Sbjct: 304  SEPQRFHILDLSNTFCTQWPTLLEALATRSPDDTPHLSITTVVSAAPSAPTSAVQRVMRE 363

Query: 1055 IGQRMEKFARLMGVPFRFNVVHHPXXXXXXXXXXXXXXXXXXXXXXAVNCVNALHAISPS 1234
            IGQRMEKFARLMGVPFRF  VHH                       AVNC+N+L  + P 
Sbjct: 364  IGQRMEKFARLMGVPFRFRAVHHSGDLAELDLDSLDLREGGANTGIAVNCMNSLRGVVPG 423

Query: 1235 GRRRDG-FLAAIRRLRPRIVTVVEEEADL------ASSEAPEEGEAFVKVFEESLRFFTA 1393
            G RR G F A++RRL PRIVTVVEEEADL      AS E  +   AF+KVF E LRFF+A
Sbjct: 424  GARRRGVFAASLRRLEPRIVTVVEEEADLVATDPDASDEGCDTEAAFLKVFGEGLRFFSA 483

Query: 1394 YLESLEESFPRASNXXXXXXXXXXXXVVDLVSCXXXXXXXXXXXXXXXXXXMRTAGFAPA 1573
            Y++SLEESFP+ SN            +VDLVSC                  +R+AGF+P 
Sbjct: 484  YMDSLEESFPKTSNERLALERGAGRAIVDLVSCPASESMERRETAAAWARRLRSAGFSPV 543

Query: 1574 AFSEDVTDDVRALLRRYREGWSMRAPAADE----AGVFLEWREQAVVWASAWKP 1723
             FSEDV DDVR+LLRRYREGWSMR  + DE    AGVFL W+EQ +VWASAW+P
Sbjct: 544  PFSEDVADDVRSLLRRYREGWSMREASTDESAAGAGVFLAWKEQPLVWASAWRP 597


>ref|XP_002467655.1| hypothetical protein SORBIDRAFT_01g031720 [Sorghum bicolor]
            gi|241921509|gb|EER94653.1| hypothetical protein
            SORBIDRAFT_01g031720 [Sorghum bicolor]
          Length = 664

 Score =  493 bits (1270), Expect = e-137
 Identities = 288/557 (51%), Positives = 338/557 (60%), Gaps = 80/557 (14%)
 Frame = +2

Query: 293  YYLEQPNYSFPHQDPYSHRDQECGTDHRDLYMDEDFXXXXXXKHLGHR------PPATST 454
            YY    ++  P   PY    +ECG DHR  YMDEDF      +H   R      PP +S+
Sbjct: 112  YYDHHHHHHQPAAAPYQ---EECGNDHR-FYMDEDFSSSSSSRHFQPRGAPPAQPPPSSS 167

Query: 455  PVFDPXXXXX--------------------------DLNLDIFXXXXXXXXXXXXXXD-- 550
            P   P                               D++LD                   
Sbjct: 168  PAPTPPHQQPASTSSGAAAGGGGHLFEAADFSFPQVDIDLDFSSPASSSGAGAAAASSSS 227

Query: 551  --GG--GRWASKLLLECARAVAARDTQRAQHLTWMLNELASPYGDAEQKVAAYFLQGLFA 718
              GG  GRWA++LLLECARAVAARD+QR Q L WMLNELASPYGD +QK+A+YFLQGLFA
Sbjct: 228  GGGGAAGRWAAQLLLECARAVAARDSQRVQQLMWMLNELASPYGDVDQKLASYFLQGLFA 287

Query: 719  RLTSSGPRTLRTLTGASDRNCSFESARRTALRFQEVSPWSSFGHVAANGAILEAFLE--- 889
            RLT+SGPRTLRTL  ASDRN SFES RRTALRFQE+SPW+SFGHVAANGAILEAFLE   
Sbjct: 288  RLTTSGPRTLRTLAAASDRNTSFESTRRTALRFQELSPWASFGHVAANGAILEAFLEASA 347

Query: 890  -----------------ETPQRLHILDLSTTFCTQWPTLLEALATRSADDTPHLTITTV- 1015
                             + P RLHILDLS TFCTQWPTLLEALATRS+DDTPHL+ITTV 
Sbjct: 348  AGAAAASSSTSSSSSQQQQPPRLHILDLSNTFCTQWPTLLEALATRSSDDTPHLSITTVV 407

Query: 1016 ---AAASSSMQRVMKEIGQRMEKFARLMGVPFRFNVVHHP---XXXXXXXXXXXXXXXXX 1177
               A  S++ QRVM+EI QR+EKFARLMGVPF F  VHH                     
Sbjct: 408  PTAAPGSAAAQRVMREIAQRLEKFARLMGVPFTFRAVHHAGDLAELDLDGLDLRREGEGG 467

Query: 1178 XXXXXAVNCVNALHAISPSG-RRRDGFLAAIRRLRPRIVTVVEEEADL----------AS 1324
                 A+NCVNAL  ++P G RRRD F+A++RRL PR+VTVVEE+ADL          +S
Sbjct: 468  ATTALAINCVNALRGVAPGGARRRDAFVASLRRLEPRVVTVVEEDADLVAASDESSSSSS 527

Query: 1325 SEAPEEGE-AFVKVFEESLRFFTAYLESLEESFPRASNXXXXXXXXXXXXVVDLVSCXXX 1501
            + A EE E AF+KVF E LRFF+AY++SLEESFP+ASN            +VDLVSC   
Sbjct: 528  AAAAEEAEAAFMKVFTEGLRFFSAYMDSLEESFPKASNERLALERAAGRAIVDLVSCPAS 587

Query: 1502 XXXXXXXXXXXXXXXMRTAGFAPAAFSEDVTDDVRALLRRYREGWSMRAPAADE---AGV 1672
                           MR+AGF+P AFS+DV DD+R+LLRRYREGW++R P AD+   AGV
Sbjct: 588  ESVERRETGASWARRMRSAGFSPVAFSDDVADDMRSLLRRYREGWTLREPGADDGVAAGV 647

Query: 1673 FLEWREQAVVWASAWKP 1723
            FL W+EQ VVW SAW+P
Sbjct: 648  FLAWKEQPVVWTSAWRP 664


>tpg|DAA45910.1| TPA: hypothetical protein ZEAMMB73_781034 [Zea mays]
          Length = 630

 Score =  488 bits (1257), Expect = e-135
 Identities = 278/542 (51%), Positives = 333/542 (61%), Gaps = 62/542 (11%)
 Frame = +2

Query: 284  SSNYYLEQPNYSFPHQDPYSHRDQECGTDHRDLYMDEDFXXXXXXK-------------- 421
            S+ YY    ++  P   PY    +ECG DH   YMDEDF      +              
Sbjct: 94   SAGYYYYD-HHQPPPPPPYQ---EECGNDH-GFYMDEDFSSSSSSRSRHFQSSSRAPPSS 148

Query: 422  -----HLGHRPPATST----------PVFDPXXXXXDLNLDIFXXXXXXXXXXXXXXDGG 556
                 H   +PP  ST             D      D++LD                 GG
Sbjct: 149  SPTPPHAQPQPPPASTSSGAGAGALFEAADFSFPQVDIDLDFSSPASSSGAAASSSGGGG 208

Query: 557  -GRWASKLLLECARAVAARDTQRAQHLTWMLNELASPYGDAEQKVAAYFLQGLFARLTSS 733
             GRWA++LLLECARAVAARD+QR Q L WMLNELASPYGD +QK+A+YFLQGLFARLT+S
Sbjct: 209  AGRWAAQLLLECARAVAARDSQRVQQLMWMLNELASPYGDVDQKLASYFLQGLFARLTTS 268

Query: 734  GPRTLRTLTGASDRNCSFESARRTALRFQEVSPWSSFGHVAANGAILEAFLE-------- 889
            GPRTLRTL  ASDRN SF+S RRTALRFQE+SPW+SFGHVAANGAILE+FL+        
Sbjct: 269  GPRTLRTLAAASDRNTSFDSTRRTALRFQELSPWASFGHVAANGAILESFLDAAAAAAAS 328

Query: 890  -----ETPQRLHILDLSTTFCTQWPTLLEALATRSADDTPHLTITTV-----AAASSSMQ 1039
                 + P RLHILDLS TFCTQWPTLLEALATRS+DDTPHL+ITTV       +S++ Q
Sbjct: 329  SSSSSQHPPRLHILDLSNTFCTQWPTLLEALATRSSDDTPHLSITTVVPTAGVPSSAAAQ 388

Query: 1040 RVMKEIGQRMEKFARLMGVPFRFNVVHH--PXXXXXXXXXXXXXXXXXXXXXXAVNCVNA 1213
            RVM+EI QR+EKFARLMGVPF F  VHH                         A+NCVNA
Sbjct: 389  RVMREIAQRLEKFARLMGVPFSFRAVHHAGDLAGLDLDGLGLGLREGGAATALAINCVNA 448

Query: 1214 LHAISPSG-RRRDGFLAAIRRLRPRIVTVVEEEADLASSEAPEEGE--------AFVKVF 1366
            L  ++P G RRRD F+A++RRL PR+VTVVEE+ADL ++  P            AF+KVF
Sbjct: 449  LRGVAPGGARRRDAFVASLRRLEPRVVTVVEEDADLVAASEPSSSSAGEADAEAAFMKVF 508

Query: 1367 EESLRFFTAYLESLEESFPRASNXXXXXXXXXXXXVVDLVSCXXXXXXXXXXXXXXXXXX 1546
             E LRFF+AY++SLEESFP+ASN            +VDLV+C                  
Sbjct: 509  TEGLRFFSAYMDSLEESFPKASNERLALERAAGRAIVDLVACPASESVERRETGASWARR 568

Query: 1547 MRTAGFAPAAFSEDVTDDVRALLRRYREGWSMRAPAADE---AGVFLEWREQAVVWASAW 1717
            MR+AGF+P AFS+DV DD+R+LLRRYREGW++R P AD+   AGVFL W+EQ VVW SAW
Sbjct: 569  MRSAGFSPVAFSDDVADDMRSLLRRYREGWTLREPGADDGAAAGVFLAWKEQPVVWTSAW 628

Query: 1718 KP 1723
            +P
Sbjct: 629  RP 630


>ref|XP_003562791.1| PREDICTED: protein SHORT-ROOT 1-like [Brachypodium distachyon]
          Length = 610

 Score =  487 bits (1253), Expect = e-135
 Identities = 282/554 (50%), Positives = 329/554 (59%), Gaps = 72/554 (12%)
 Frame = +2

Query: 278  QISSNYYLEQPNYSF-------------PHQDPYSHRDQECGTDHRDLYMDEDFXXXXXX 418
            Q    YY  QP  S+              HQD + H  Q      + LYMDEDF      
Sbjct: 60   QPQQQYYYSQPQQSYYLEPYHEECGGGNAHQDHHQHHQQH-QHQQQQLYMDEDFSSSSSS 118

Query: 419  KHLGHR--------------PPATSTP-------VFDPXXXXX--DLNLDIFXXXXXXXX 529
            +H G                PP ++T        +F+P       DLNLD          
Sbjct: 119  RHFGGHHGSHGGQQQQPSSTPPLSTTSSTAAGHALFEPAELSFPPDLNLDFSSPASSSGG 178

Query: 530  XXXXXXD---------GGGRWASKLLLECARAVAARDTQRAQHLTWMLNELASPYGDAEQ 682
                            GGGRWAS+LL+ECARAVA+RD+ R Q L WMLNELASPYGD EQ
Sbjct: 179  GIAAASASSPAVIGGAGGGRWASQLLMECARAVASRDSTRVQQLMWMLNELASPYGDVEQ 238

Query: 683  KVAAYFLQGLFARLTSSGPRTLRTLTGASDRNCSFESARRTALRFQEVSPWSSFGHVAAN 862
            K+A+YFLQ LFARLT+SGPRTLRTL  A+DRN SF+S RR AL+FQE+SPWSSFGHVAAN
Sbjct: 239  KLASYFLQALFARLTASGPRTLRTLAAATDRNTSFDSTRRVALKFQELSPWSSFGHVAAN 298

Query: 863  GAILEAFLE-------ETPQRLHILDLSTTFCTQWPTLLEALATRSADDTPHLTITTV-- 1015
            GAILE+FLE         PQR HILDLS TFCTQWPTLLEALATRS DDTPHL+ITTV  
Sbjct: 299  GAILESFLEAAAAAPSSEPQRFHILDLSNTFCTQWPTLLEALATRSPDDTPHLSITTVHV 358

Query: 1016 ----AAASSSMQRVMKEIGQRMEKFARLMGVPFRFNVVHHPXXXXXXXXXXXXXXXXXXX 1183
                AA+S ++QRVM+EIGQRMEKFARLMGVPFRF  VHH                    
Sbjct: 359  SSSSAASSPAVQRVMREIGQRMEKFARLMGVPFRFRAVHHSGDLAELDLDALDVREGGAT 418

Query: 1184 XXXAVNCVNALHAISPSGRRRDGFLAAIRRLRPRIVTVVEEEADL---------ASSEAP 1336
               AVNCVN+L  +    RRR  F A +RRL PR+VTVVEEEAD          A  +A 
Sbjct: 419  TGIAVNCVNSLRGV--GARRRGEFAALLRRLGPRVVTVVEEEADFVADSDHHRSADQDAE 476

Query: 1337 EEGEAFVKVFEESLRFFTAYLESLEESFPRASNXXXXXXXXXXXXVVDLVSCXXXXXXXX 1516
             +  AF+KVF E LRFF+AY++SLEESFP+ SN            +VDLVSC        
Sbjct: 477  TDQAAFLKVFGEGLRFFSAYMDSLEESFPKTSNERLALERGAGRAIVDLVSCPASESMER 536

Query: 1517 XXXXXXXXXXMRTAGFAPAAFSEDVTDDVRALLRRYREGWSMRAPAADE-----AGVFLE 1681
                      +R AGF+P AFS+DV DDVR+LLRRYREGWSMR   A++     AGVFL+
Sbjct: 537  RETAAAWARRLRCAGFSPVAFSDDVADDVRSLLRRYREGWSMRDAGAEDSAAAGAGVFLQ 596

Query: 1682 WREQAVVWASAWKP 1723
            W+EQ +VWASAW+P
Sbjct: 597  WKEQPLVWASAWRP 610


>sp|A2XIA8.1|SHR2_ORYSI RecName: Full=Protein SHORT-ROOT 2; AltName: Full=OsSHR2
            gi|125544429|gb|EAY90568.1| hypothetical protein
            OsI_12169 [Oryza sativa Indica Group]
          Length = 603

 Score =  483 bits (1242), Expect = e-133
 Identities = 284/545 (52%), Positives = 331/545 (60%), Gaps = 65/545 (11%)
 Frame = +2

Query: 284  SSNYYLEQPN------YSFPHQDPYSHRDQECGTDHRDLYMDEDFXXXXXXK--HLGHRP 439
            ++NYY +         Y    Q P ++ + ECG  H+  YMDEDF      +  H G   
Sbjct: 65   NTNYYYQGGGGGGGGYYYAEEQQPAAYLE-ECGNGHQ-FYMDEDFSSSSSSRQFHSGTGA 122

Query: 440  PATSTPVFDPXXXXX-------------------DLNLDIFXXXXXXXXXXXXXXDGG-- 556
            P+ S PV  P                        D++LD                 G   
Sbjct: 123  PS-SAPVPPPPSATTSSAGGHGLFEAADFSFPQVDISLDFGGSPAVPSSSGAGAGAGAAP 181

Query: 557  ---GRWASKLLLECARAVAARDTQRAQHLTWMLNELASPYGDAEQKVAAYFLQGLFARLT 727
               GRWA++LL+ECARAVA RD+QR Q L WMLNELASPYGD +QK+A+YFLQGLFARLT
Sbjct: 182  SSSGRWAAQLLMECARAVAGRDSQRVQQLMWMLNELASPYGDVDQKLASYFLQGLFARLT 241

Query: 728  SSGPRTLRTLTGASDRNCSFESARRTALRFQEVSPWSSFGHVAANGAILEAFLEET---- 895
            +SGPRTLRTL  ASDRN SF+S RRTAL+FQE+SPW+ FGHVAANGAILE+FLE      
Sbjct: 242  TSGPRTLRTLATASDRNASFDSTRRTALKFQELSPWTPFGHVAANGAILESFLEAAAAGA 301

Query: 896  -------------PQRLHILDLSTTFCTQWPTLLEALATRSADDTPHLTITTV---AAAS 1027
                         P RLHILDLS TFCTQWPTLLEALATRS+DDTPHL+ITTV   AA S
Sbjct: 302  AAASSSSSSSSTPPTRLHILDLSNTFCTQWPTLLEALATRSSDDTPHLSITTVVPTAAPS 361

Query: 1028 SSMQRVMKEIGQRMEKFARLMGVPFRFNVVHHPXXXXXXXXXXXXXXXXXXXXXXAVNCV 1207
            ++ QRVM+EIGQR+EKFARLMGVPF F  VHH                       AVNCV
Sbjct: 362  AAAQRVMREIGQRLEKFARLMGVPFSFRAVHHAGDLADLDLAALDLREGGATAALAVNCV 421

Query: 1208 NALHAISPSGRRRDGFLAAIRRLRPRIVTVVEEEADLASSEAPEEGE-----AFVKVFEE 1372
            NAL  ++   R RD F+A++RRL PR+VTVVEEEADLA+ EA    E     AFVKVF E
Sbjct: 422  NALRGVA---RGRDAFVASLRRLEPRVVTVVEEEADLAAPEADASSEADTDAAFVKVFGE 478

Query: 1373 SLRFFTAYLESLEESFPRASNXXXXXXXXXXXXVVDLVSCXXXXXXXXXXXXXXXXXXMR 1552
             LRFF+AY++SLEESFP+ SN            +VDLVSC                  MR
Sbjct: 479  GLRFFSAYMDSLEESFPKTSNERLSLERAVGRAIVDLVSCPASQSAERRETAASWARRMR 538

Query: 1553 TAGFAPAAFSEDVTDDVRALLRRYREGWSMR--------APAADEAGVFLEWREQAVVWA 1708
            +AGF+PAAFSEDV DDVR+LLRRY+EGWSMR        A  A  AG FL W+EQ VVWA
Sbjct: 539  SAGFSPAAFSEDVADDVRSLLRRYKEGWSMRDAGGATDDAAGAAAAGAFLAWKEQPVVWA 598

Query: 1709 SAWKP 1723
            SAWKP
Sbjct: 599  SAWKP 603


>ref|NP_001173487.1| Os03g0433200 [Oryza sativa Japonica Group]
            gi|75137668|sp|Q75I13.1|SHR2_ORYSJ RecName: Full=Protein
            SHORT-ROOT 2; AltName: Full=OsSHR2
            gi|41469537|gb|AAS07303.1| putative GRAS family
            transcription factor [Oryza sativa Japonica Group]
            gi|108708985|gb|ABF96780.1| GRAS family transcription
            factor containing protein, expressed [Oryza sativa
            Japonica Group] gi|255674615|dbj|BAH92215.1| Os03g0433200
            [Oryza sativa Japonica Group]
          Length = 603

 Score =  483 bits (1242), Expect = e-133
 Identities = 284/545 (52%), Positives = 331/545 (60%), Gaps = 65/545 (11%)
 Frame = +2

Query: 284  SSNYYLEQPN------YSFPHQDPYSHRDQECGTDHRDLYMDEDFXXXXXXK--HLGHRP 439
            ++NYY +         Y    Q P ++ + ECG  H+  YMDEDF      +  H G   
Sbjct: 65   NTNYYYQGGGGGGGGYYYAEEQQPAAYLE-ECGNGHQ-FYMDEDFSSSSSSRQFHSGTGA 122

Query: 440  PATSTPVFDPXXXXX-------------------DLNLDIFXXXXXXXXXXXXXXDGG-- 556
            P+ S PV  P                        D++LD                 G   
Sbjct: 123  PS-SAPVPPPPSATTSSAGGHGLFEAADFSFPQVDISLDFGGSPAVPSSSGAGAGAGAAP 181

Query: 557  ---GRWASKLLLECARAVAARDTQRAQHLTWMLNELASPYGDAEQKVAAYFLQGLFARLT 727
               GRWA++LL+ECARAVA RD+QR Q L WMLNELASPYGD +QK+A+YFLQGLFARLT
Sbjct: 182  SSSGRWAAQLLMECARAVAGRDSQRVQQLMWMLNELASPYGDVDQKLASYFLQGLFARLT 241

Query: 728  SSGPRTLRTLTGASDRNCSFESARRTALRFQEVSPWSSFGHVAANGAILEAFLEET---- 895
            +SGPRTLRTL  ASDRN SF+S RRTAL+FQE+SPW+ FGHVAANGAILE+FLE      
Sbjct: 242  TSGPRTLRTLATASDRNASFDSTRRTALKFQELSPWTPFGHVAANGAILESFLEAAAAGA 301

Query: 896  -------------PQRLHILDLSTTFCTQWPTLLEALATRSADDTPHLTITTV---AAAS 1027
                         P RLHILDLS TFCTQWPTLLEALATRS+DDTPHL+ITTV   AA S
Sbjct: 302  AASSSSSSSSSTPPTRLHILDLSNTFCTQWPTLLEALATRSSDDTPHLSITTVVPTAAPS 361

Query: 1028 SSMQRVMKEIGQRMEKFARLMGVPFRFNVVHHPXXXXXXXXXXXXXXXXXXXXXXAVNCV 1207
            ++ QRVM+EIGQR+EKFARLMGVPF F  VHH                       AVNCV
Sbjct: 362  AAAQRVMREIGQRLEKFARLMGVPFSFRAVHHSGDLADLDLAALDLREGGATAALAVNCV 421

Query: 1208 NALHAISPSGRRRDGFLAAIRRLRPRIVTVVEEEADLASSEAPEEGE-----AFVKVFEE 1372
            NAL  ++   R RD F+A++RRL PR+VTVVEEEADLA+ EA    E     AFVKVF E
Sbjct: 422  NALRGVA---RGRDAFVASLRRLEPRVVTVVEEEADLAAPEADASSEADTDAAFVKVFGE 478

Query: 1373 SLRFFTAYLESLEESFPRASNXXXXXXXXXXXXVVDLVSCXXXXXXXXXXXXXXXXXXMR 1552
             LRFF+AY++SLEESFP+ SN            +VDLVSC                  MR
Sbjct: 479  GLRFFSAYMDSLEESFPKTSNERLSLERAVGRAIVDLVSCPASQSAERRETAASWARRMR 538

Query: 1553 TAGFAPAAFSEDVTDDVRALLRRYREGWSMR--------APAADEAGVFLEWREQAVVWA 1708
            +AGF+PAAFSEDV DDVR+LLRRY+EGWSMR        A  A  AG FL W+EQ VVWA
Sbjct: 539  SAGFSPAAFSEDVADDVRSLLRRYKEGWSMRDAGGATDDAAGAAAAGAFLAWKEQPVVWA 598

Query: 1709 SAWKP 1723
            SAWKP
Sbjct: 599  SAWKP 603


>gb|EEE67495.1| hypothetical protein OsJ_24926 [Oryza sativa Japonica Group]
          Length = 584

 Score =  466 bits (1199), Expect = e-128
 Identities = 272/524 (51%), Positives = 316/524 (60%), Gaps = 50/524 (9%)
 Frame = +2

Query: 302  EQPNYSFPHQDPYSHRDQECGT-DHRDLYMDEDFXXXXXXKHLGH-------RPPATSTP 457
            + P   + + +PY    +ECG   H  LYMDEDF      +H  H       +PPA+STP
Sbjct: 72   QPPPSQYYYLEPYQ---EECGNAPHHQLYMDEDFSSSSSSRHFHHGARVQQQQPPASSTP 128

Query: 458  ---------------------VFDPXXXXX--DLNLDIFXXXXXXXXXXXXXX----DGG 556
                                 +F+        DLNLD                     GG
Sbjct: 129  TGTAPTPPLSTSSTAAGAGHGLFEAADLSFPPDLNLDFSSPASSSGGGTASSGAVGGGGG 188

Query: 557  GRWASKLLLECARAVAARDTQRAQHLTWMLNELASPYGDAEQKVAAYFLQGLFARLTSSG 736
            GRWAS+LLLECAR+VAARD+QR Q L WMLNELASPYGD EQK+A+YFLQGLFARLT+SG
Sbjct: 189  GRWASQLLLECARSVAARDSQRVQQLMWMLNELASPYGDVEQKLASYFLQGLFARLTASG 248

Query: 737  PRTLRTLTGASDRNCSFESARRTALRFQEVSPWSSFGHVAANGAILEAFLE------ETP 898
            PRTLRTL  ASDRN SF+S RRTALRFQE+SPWSSFGHVAANGAILE+FLE         
Sbjct: 249  PRTLRTLAAASDRNTSFDSTRRTALRFQELSPWSSFGHVAANGAILESFLEVAAAASSET 308

Query: 899  QRLHILDLSTTFCTQWPTLLEALATRSADDTPHLTITTVAAASSS-----MQRVMKEIGQ 1063
            QR HILDLS TFCTQWPTLLEALATRSAD+TPHL+ITTV +A+ S     +QRVM+EIGQ
Sbjct: 309  QRFHILDLSNTFCTQWPTLLEALATRSADETPHLSITTVVSAAPSAPTAAVQRVMREIGQ 368

Query: 1064 RMEKFARLMGVPFRFNVVHHPXXXXXXXXXXXXXXXXXXXXXXAVNCVNALHAISPSGRR 1243
            RMEKFARLMGVPFRF  VHH                       AVNCVN     SP+   
Sbjct: 369  RMEKFARLMGVPFRFRAVHHSGDLAELDLDALDLREGGATTALAVNCVN-----SPA--- 420

Query: 1244 RDGFLAAIRRLRPRIVTVVEEEADLASSEAPEEGEAFVKVFEESLRFFTAYLESLEESFP 1423
            R G        R   +   + +A  A+ E  +   AF+KVF E LRFF+AY++SLEESFP
Sbjct: 421  RRGSRQGPPARREADLVASDPDASSATEEGGDTEAAFLKVFGEGLRFFSAYMDSLEESFP 480

Query: 1424 RASNXXXXXXXXXXXXVVDLVSCXXXXXXXXXXXXXXXXXXMRTAGFAPAAFSEDVTDDV 1603
            + SN            +VDLVSC                  MR+AGF+P AFSEDV DDV
Sbjct: 481  KTSNERLALERGAGRAIVDLVSCPASESMERRETAASWARRMRSAGFSPVAFSEDVADDV 540

Query: 1604 RALLRRYREGWSMRAPAADE----AGVFLEWREQAVVWASAWKP 1723
            R+LLRRYREGWSMR    D+    AGVFL W+EQ +VWASAW+P
Sbjct: 541  RSLLRRYREGWSMREAGTDDSAAGAGVFLAWKEQPLVWASAWRP 584


>gb|EEE59318.1| hypothetical protein OsJ_11379 [Oryza sativa Japonica Group]
          Length = 584

 Score =  451 bits (1159), Expect = e-124
 Identities = 273/545 (50%), Positives = 321/545 (58%), Gaps = 65/545 (11%)
 Frame = +2

Query: 284  SSNYYLEQPN------YSFPHQDPYSHRDQECGTDHRDLYMDEDFXXXXXXK--HLGHRP 439
            ++NYY +         Y    Q P ++ + ECG  H+  YMDEDF      +  H G   
Sbjct: 65   NTNYYYQGGGGGGGGYYYAEEQQPAAYLE-ECGNGHQ-FYMDEDFSSSSSSRQFHSGTGA 122

Query: 440  PATSTPVFDPXXXXX-------------------DLNLDIFXXXXXXXXXXXXXXDGG-- 556
            P+ S PV  P                        D++LD                 G   
Sbjct: 123  PS-SAPVPPPPSATTSSAGGHGLFEAADFSFPQVDISLDFGGSPAVPSSSGAGAGAGAAP 181

Query: 557  ---GRWASKLLLECARAVAARDTQRAQHLTWMLNELASPYGDAEQKVAAYFLQGLFARLT 727
               GRWA++LL+ECARAVA RD+QR Q L WMLNELASPYG+ +QK+A+YFLQGLFARLT
Sbjct: 182  SSSGRWAAQLLMECARAVAGRDSQRVQQLMWMLNELASPYGNVDQKLASYFLQGLFARLT 241

Query: 728  SSGPRTLRTLTGASDRNCSFESARRTALRFQEVSPWSSFGHVAANGAILEAFLEET---- 895
            +S P        ASDRN SF+S RRTAL+FQE+SPW+ FGHVAANGAILE+FLE      
Sbjct: 242  TSRPAHAADARTASDRNASFDSTRRTALKFQELSPWTPFGHVAANGAILESFLEAAAAGA 301

Query: 896  -------------PQRLHILDLSTTFCTQWPTLLEALATRSADDTPHLTITTV---AAAS 1027
                         P RLHILDLS TFCTQWPTLLEALATRS+DDTPHL+ITTV   AA S
Sbjct: 302  AASSSSSSSSSTPPTRLHILDLSNTFCTQWPTLLEALATRSSDDTPHLSITTVVPTAAPS 361

Query: 1028 SSMQRVMKEIGQRMEKFARLMGVPFRFNVVHHPXXXXXXXXXXXXXXXXXXXXXXAVNCV 1207
            ++ QRVM+EIGQR+EKFARLMGVPF F                            AVNCV
Sbjct: 362  AAAQRVMREIGQRLEKFARLMGVPFSFRA-------------------GGATAALAVNCV 402

Query: 1208 NALHAISPSGRRRDGFLAAIRRLRPRIVTVVEEEADLASSEAPEEGE-----AFVKVFEE 1372
            NAL  ++   R RD F+A++RRL PR+VTVVEEEADLA+ EA    E     AFVKVF E
Sbjct: 403  NALRGVA---RGRDAFVASLRRLEPRVVTVVEEEADLAAPEADASSEADTDAAFVKVFGE 459

Query: 1373 SLRFFTAYLESLEESFPRASNXXXXXXXXXXXXVVDLVSCXXXXXXXXXXXXXXXXXXMR 1552
             LRFF+AY++SLEESFP+ SN            +VDLVSC                  MR
Sbjct: 460  GLRFFSAYMDSLEESFPKTSNERLSLERAVGRAIVDLVSCPASQSAERRETAASWARRMR 519

Query: 1553 TAGFAPAAFSEDVTDDVRALLRRYREGWSMR--------APAADEAGVFLEWREQAVVWA 1708
            +AGF+PAAFSEDV DDVR+LLRRY+EGWSMR        A  A  AG FL W+EQ VVWA
Sbjct: 520  SAGFSPAAFSEDVADDVRSLLRRYKEGWSMRDAGGATDDAAGAAAAGAFLAWKEQPVVWA 579

Query: 1709 SAWKP 1723
            SAWKP
Sbjct: 580  SAWKP 584


>ref|XP_004231927.1| PREDICTED: protein SHORT-ROOT-like [Solanum lycopersicum]
          Length = 507

 Score =  424 bits (1089), Expect = e-116
 Identities = 233/507 (45%), Positives = 307/507 (60%), Gaps = 27/507 (5%)
 Frame = +2

Query: 284  SSNYYLEQPNYSFPHQDPYSHRDQECGTDHRDLYMDEDFXXXXXXKHLGHRPP------- 442
            SS+    + N ++ +   ++H+D+EC     + +MDED       KH  + PP       
Sbjct: 30   SSSRSSNKQNSTYNYHPHHNHQDEECF----NFFMDEDDFSSSSSKHNNYPPPHYNQYQQ 85

Query: 443  ------ATSTPV----------FDPXXXXXDLNLDIFXXXXXXXXXXXXXXDGGGRWASK 574
                   +STP           F P     DLNL+                   G+WA+ 
Sbjct: 86   ISTPTTTSSTPTHQSQSQYDHQFSPAR---DLNLEFASSF-------------SGKWATD 129

Query: 575  LLLECARAVAARDTQRAQHLTWMLNELASPYGDAEQKVAAYFLQGLFARLTSSGPRTLRT 754
            +LLE +RA+A +++ R Q L WMLNEL+SPYGD EQK+A+YFLQ LF+R+T SG R  RT
Sbjct: 130  ILLETSRAIADKNSTRVQQLMWMLNELSSPYGDTEQKLASYFLQALFSRMTDSGERCYRT 189

Query: 755  LTGASDRNCSFESARRTALRFQEVSPWSSFGHVAANGAILEAFLEETPQRLHILDLSTTF 934
            L  ASD+ CSFES R+  L+FQEVSPW++FGHVA+NGAI+EA   E   +LHI+D+S T+
Sbjct: 190  LLSASDKTCSFESTRKLVLKFQEVSPWTTFGHVASNGAIMEAL--EGESKLHIIDISNTY 247

Query: 935  CTQWPTLLEALATRSADDTPHLTITTVAAASS----SMQRVMKEIGQRMEKFARLMGVPF 1102
            CTQWPTLLEALATR+ D+TPHL +TTV AA+S    S+Q+VMKEIG RMEKFARLMGVPF
Sbjct: 248  CTQWPTLLEALATRT-DETPHLRLTTVVAAASGGAASVQKVMKEIGSRMEKFARLMGVPF 306

Query: 1103 RFNVVHHPXXXXXXXXXXXXXXXXXXXXXXAVNCVNALHAISPSGRRRDGFLAAIRRLRP 1282
            +FNV+HH                       A+NC+ ALH+++P+G RRD  ++  RRL+P
Sbjct: 307  KFNVIHH---VGNLSELDMGALDIKEEEALAINCIGALHSVTPAGNRRDYLISLFRRLQP 363

Query: 1283 RIVTVVEEEADLASSEAPEEGEAFVKVFEESLRFFTAYLESLEESFPRASNXXXXXXXXX 1462
            RIVT+VEEEADL   +   +G  FV  F+E L++   Y ESL+ESF + SN         
Sbjct: 364  RIVTIVEEEADL---DVGVDGFDFVNGFQECLKWIRVYFESLDESFSKTSNERLMLERQA 420

Query: 1463 XXXVVDLVSCXXXXXXXXXXXXXXXXXXMRTAGFAPAAFSEDVTDDVRALLRRYREGWSM 1642
               +VDL++C                  M   GF+P  +S++V DDVRALLRRY++GWSM
Sbjct: 421  GRSIVDLLACPPSESMERRETGAKWSHRMHAGGFSPVLYSDEVCDDVRALLRRYKDGWSM 480

Query: 1643 RAPAADEAGVFLEWREQAVVWASAWKP 1723
                 D AG+FL W+EQ VVWASAWKP
Sbjct: 481  GQCGGDSAGIFLSWKEQPVVWASAWKP 507


>ref|XP_003517347.1| PREDICTED: protein SHORT-ROOT-like [Glycine max]
          Length = 476

 Score =  417 bits (1072), Expect = e-114
 Identities = 236/484 (48%), Positives = 296/484 (61%), Gaps = 5/484 (1%)
 Frame = +2

Query: 284  SSNYYLEQPNYSFPHQDPYSHRDQECGTDHRDLYMDEDFXXXXXXKHL---GHRPPATST 454
            SS    +Q NY      PY   D+EC     + +MDE+       KH       PP+T+T
Sbjct: 32   SSRSSRQQQNY------PYPQEDEECF----NFFMDEEDLSSSSSKHYCPYQPHPPSTTT 81

Query: 455  --PVFDPXXXXXDLNLDIFXXXXXXXXXXXXXXDGGGRWASKLLLECARAVAARDTQRAQ 628
                F P     + +                     G+WA  +LLE ARAVA ++T R Q
Sbjct: 82   IHHSFSPTPCDFEFS---------------------GKWAQDILLETARAVADKNTTRLQ 120

Query: 629  HLTWMLNELASPYGDAEQKVAAYFLQGLFARLTSSGPRTLRTLTGASDRNCSFESARRTA 808
             L WMLNEL+SPYGD +QK+A+YFLQ  F+R++ +G RT RTL  AS++ CSFES R+T 
Sbjct: 121  QLMWMLNELSSPYGDTDQKLASYFLQAFFSRISQAGDRTYRTLASASEKTCSFESTRKTV 180

Query: 809  LRFQEVSPWSSFGHVAANGAILEAFLEETPQRLHILDLSTTFCTQWPTLLEALATRSADD 988
            L+FQEVSPW++FGHVA+NGAILEA LE  P +LHI+D+S T+CTQWPTL EALATR+ DD
Sbjct: 181  LKFQEVSPWTTFGHVASNGAILEA-LEGEP-KLHIIDISNTYCTQWPTLFEALATRN-DD 237

Query: 989  TPHLTITTVAAASSSMQRVMKEIGQRMEKFARLMGVPFRFNVVHHPXXXXXXXXXXXXXX 1168
            TPHL +T+V  A ++ Q++MKEIG RMEKFARLMGVPF+FNVVHH               
Sbjct: 238  TPHLRLTSVVTADATAQKLMKEIGARMEKFARLMGVPFKFNVVHH---VGQLSDLDFSML 294

Query: 1169 XXXXXXXXAVNCVNALHAISPSGRRRDGFLAAIRRLRPRIVTVVEEEADLASSEAPEEGE 1348
                    A+NCVN LH+I+  G  RD  ++++RRL+PRIVT+VEEEADL   +   EG 
Sbjct: 295  DIKEDEALAINCVNTLHSIAAVGNHRDAVISSLRRLKPRIVTLVEEEADL---DVGLEGF 351

Query: 1349 AFVKVFEESLRFFTAYLESLEESFPRASNXXXXXXXXXXXXVVDLVSCXXXXXXXXXXXX 1528
             FVK FEE LR+F  Y E+L+ESFPR SN            VVDLV+C            
Sbjct: 352  EFVKGFEECLRWFRVYFEALDESFPRTSNERLLLERAAGRAVVDLVACSAAESVERRETA 411

Query: 1529 XXXXXXMRTAGFAPAAFSEDVTDDVRALLRRYREGWSMRAPAADEAGVFLEWREQAVVWA 1708
                  M   G    AFSE+V DDVRALLRRYREGW+M      +AG+FL W+EQ VVWA
Sbjct: 412  ARWARRMHGGGLNTVAFSEEVCDDVRALLRRYREGWAM--TQCSDAGIFLTWKEQPVVWA 469

Query: 1709 SAWK 1720
            SAW+
Sbjct: 470  SAWR 473


>ref|XP_003611578.1| GRAS family transcription factor [Medicago truncatula]
            gi|355512913|gb|AES94536.1| GRAS family transcription
            factor [Medicago truncatula]
          Length = 491

 Score =  416 bits (1070), Expect = e-113
 Identities = 219/395 (55%), Positives = 266/395 (67%), Gaps = 6/395 (1%)
 Frame = +2

Query: 557  GRWASKLLLECARAVAARDTQRAQHLTWMLNELASPYGDAEQKVAAYFLQGLFARLTSSG 736
            GRWA+ +LLE ARA+A +++ R Q L WMLNEL+SPYGD EQK+AAYFLQ LF+R+T +G
Sbjct: 108  GRWANNILLETARAIAEKNSTRLQQLMWMLNELSSPYGDIEQKLAAYFLQALFSRMTEAG 167

Query: 737  PRTLRTLTGASDRNCSFESARRTALRFQEVSPWSSFGHVAANGAILEAFLEETPQRLHIL 916
             RT RTL  AS++ CSFES R+T L+FQEVSPW++FGHVA NGAILEAF  E   +LHI+
Sbjct: 168  TRTFRTLASASEKTCSFESTRKTVLKFQEVSPWTTFGHVACNGAILEAF--EGDSKLHII 225

Query: 917  DLSTTFCTQWPTLLEALATRSADDTPHLTITTVAAASSSMQRVMKEIGQRMEKFARLMGV 1096
            D+S T+CTQWPTL EALATR ADDTPHL +TT+  A  S+Q+VMKEIG RMEKFARLMGV
Sbjct: 226  DISNTYCTQWPTLFEALATR-ADDTPHLRLTTIVTAGGSVQKVMKEIGARMEKFARLMGV 284

Query: 1097 PFRFNVVHHPXXXXXXXXXXXXXXXXXXXXXXAVNCVNALHAIS------PSGRRRDGFL 1258
            PF+FNV+HH                       AVNCVNALH+++          RRD  +
Sbjct: 285  PFKFNVIHH---SGDLSDLNFLDLDIKEDEALAVNCVNALHSVTVGNGNGNGNNRRDSLI 341

Query: 1259 AAIRRLRPRIVTVVEEEADLASSEAPEEGEAFVKVFEESLRFFTAYLESLEESFPRASNX 1438
            A++  LRPRIVT+VEEEADL       EG  FV  FEE LR+F  Y E+LEESFP+ SN 
Sbjct: 342  ASLIALRPRIVTMVEEEADL---NFGNEGYEFVNGFEECLRWFRVYFEALEESFPKTSNE 398

Query: 1439 XXXXXXXXXXXVVDLVSCXXXXXXXXXXXXXXXXXXMRTAGFAPAAFSEDVTDDVRALLR 1618
                       +VDLV+C                  +   GF   AFSE+V DDVRALLR
Sbjct: 399  RLMLEREAGRGIVDLVACAPAESIERRETAVRWSRRLHGRGFNTVAFSEEVCDDVRALLR 458

Query: 1619 RYREGWSMRAPAADEAGVFLEWREQAVVWASAWKP 1723
            RY+EGWSM     ++AG+FL W+EQ VVWASAW+P
Sbjct: 459  RYKEGWSM--IRCNDAGIFLTWKEQPVVWASAWRP 491