BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00002776
         (1927 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40014.3| unnamed protein product [Vitis vinifera]              505   e-140
ref|XP_002273602.1| PREDICTED: RNA polymerase sigma factor rpoD-...   505   e-140
ref|XP_004303327.1| PREDICTED: RNA polymerase sigma factor sigB-...   490   e-136
ref|XP_006878613.1| hypothetical protein AMTR_s00011p00258380 [A...   489   e-135
ref|XP_006484754.1| PREDICTED: RNA polymerase sigma factor sigB-...   482   e-133
gb|EOY10370.1| RNApolymerase sigma subunit 2 [Theobroma cacao]        482   e-133
ref|XP_006437338.1| hypothetical protein CICLE_v10030998mg [Citr...   479   e-132
ref|XP_002523972.1| RNA polymerase sigma factor rpoD1, putative ...   477   e-132
ref|XP_004229543.1| PREDICTED: RNA polymerase sigma factor sigB-...   476   e-131
gb|EXB70625.1| RNA polymerase sigma factor rpoD [Morus notabilis]     476   e-131
ref|XP_004145011.1| PREDICTED: RNA polymerase sigma factor sigB-...   476   e-131
ref|XP_006484755.1| PREDICTED: RNA polymerase sigma factor sigB-...   475   e-131
ref|XP_006577887.1| PREDICTED: RNA polymerase sigma factor sigB-...   474   e-131
ref|XP_002319746.2| SIGMA FACTOR B family protein [Populus trich...   467   e-129
ref|XP_006359117.1| PREDICTED: RNA polymerase sigma factor sigB-...   466   e-128
gb|EMJ05079.1| hypothetical protein PRUPE_ppa006657mg [Prunus pe...   463   e-127
emb|CAD20831.2| sigma factor [Spinacia oleracea]                      457   e-126
ref|XP_006417677.1| hypothetical protein EUTSA_v10007187mg [Eutr...   457   e-126
ref|XP_006307126.1| hypothetical protein CARUB_v10008711mg [Caps...   456   e-125
ref|XP_002325455.2| hypothetical protein POPTR_0019s06100g [Popu...   453   e-124

>emb|CBI40014.3| unnamed protein product [Vitis vinifera]
          Length = 575

 Score =  505 bits (1301), Expect = e-140
 Identities = 284/550 (51%), Positives = 353/550 (64%), Gaps = 14/550 (2%)
 Frame = +1

Query: 205  KARDFVHLQIHCLLSPT--------TSVIDFGQIDKLEARSTSSPSCVIKPLAYVGAVGP 360
            K R+ ++ ++ C LS T        T+V+D  ++      S S+     +P  Y+G VGP
Sbjct: 26   KNREAIYFRVQCALSTTSPPLSTSTTAVLDIEKLRLPSLESHSNSVAAHRPWTYIGVVGP 85

Query: 361  PTKTGIQMTLASDKLLSDXXXXXXXXXXXXXXXXXXXXXXXXXXXKMMGMNPFVEVENLE 540
            PT+   + TLA + LL+                            +++G N   + E   
Sbjct: 86   PTEANFEATLARETLLTSEEAVIAAAAAEAVALAKAAVKVAKDAARLVGKNNSAKSETKP 145

Query: 541  SS--SDAEIKWLERMSLIGTE-LGGTNHFADAETEYPQANFSPDQFLHTDCFSFTYSESQ 711
            +S  S  +     R+    TE +G       AET     N   D    +D    T  E +
Sbjct: 146  ASFLSGDDTSQFRRIQFTETERIGILGDSVGAETGMVDYNSLQDVTEDSDDLEPTLEELE 205

Query: 712  M--TEHAESIAVGSXXXXXXXXXXXXXXXXXXXGVTSLKSGLSGRKKR-SMQEVDYSDPX 882
            +   E ++SI V S                   GV S++SG + R+KR S+QEVDYSDP 
Sbjct: 206  LLEAEFSKSIVVRSNRQVERKARRARAAEKASAGVVSVRSGSTSRRKRVSLQEVDYSDPL 265

Query: 883  XXXXXXXXXXXXXXAAEEIRLSEGIQDLLKLERLKETLAERHGCQPTFAQWAAAAGVDRK 1062
                          A EE+ LSEGIQDLLKLE+L+E L ER G +PTFAQWAAAAGVD+K
Sbjct: 266  RYLRGTTSTSRLLTATEELELSEGIQDLLKLEKLQEDLEERFGVKPTFAQWAAAAGVDQK 325

Query: 1063 SLRKRLTLGTFSKDKMIKSNIRLVISIAKNYLGTGLNIQDLVQEGCRGLVRGAEKFDASK 1242
            +LR+R   G   KDKMIKSNIRLVISIAKNY G G+NIQDLVQEGCRGLVRGAEKFDASK
Sbjct: 326  TLRRRTNYGIRCKDKMIKSNIRLVISIAKNYQGAGMNIQDLVQEGCRGLVRGAEKFDASK 385

Query: 1243 GFKFSTYAHWWIKQSVRKFLSEHSRTIRLPYHMVEASYRVREAEKRLHRENGRHPGTEEV 1422
            GFKFSTYAHWWIKQ+VRK LS+ SRTIRLP+HMVEA+YRV+EA K+L+ ENGRHP  EEV
Sbjct: 386  GFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPNNEEV 445

Query: 1423 AVATGLSMKKLEAVMLTPKAPISLDQKIGFNESLKPTDVIAHPDAETSEDMLIKQFMRQD 1602
            A ATGLSMK+L AV+LTPKAP SLDQKIG N++LKP++VIA PDAET+E++LIKQFMR+D
Sbjct: 446  AEATGLSMKRLNAVLLTPKAPRSLDQKIGINQNLKPSEVIADPDAETAEELLIKQFMRED 505

Query: 1603 LNKVLDTLNPKEKQVVRWRFGLEDGRMKTLQEIGELMGVSRERVRQIEXXXXXXXXXXXX 1782
            L KVL++LNP+EKQV+RWR+GLEDGR KTLQEIGELMGVSRER+RQIE            
Sbjct: 506  LEKVLNSLNPREKQVIRWRYGLEDGRTKTLQEIGELMGVSRERIRQIESCAFRKLKNKRR 565

Query: 1783 TNNLRQYIVT 1812
            T +L+QY+V+
Sbjct: 566  TKHLQQYLVS 575


>ref|XP_002273602.1| PREDICTED: RNA polymerase sigma factor rpoD-like [Vitis vinifera]
          Length = 578

 Score =  505 bits (1301), Expect = e-140
 Identities = 284/550 (51%), Positives = 353/550 (64%), Gaps = 14/550 (2%)
 Frame = +1

Query: 205  KARDFVHLQIHCLLSPT--------TSVIDFGQIDKLEARSTSSPSCVIKPLAYVGAVGP 360
            K R+ ++ ++ C LS T        T+V+D  ++      S S+     +P  Y+G VGP
Sbjct: 29   KNREAIYFRVQCALSTTSPPLSTSTTAVLDIEKLRLPSLESHSNSVAAHRPWTYIGVVGP 88

Query: 361  PTKTGIQMTLASDKLLSDXXXXXXXXXXXXXXXXXXXXXXXXXXXKMMGMNPFVEVENLE 540
            PT+   + TLA + LL+                            +++G N   + E   
Sbjct: 89   PTEANFEATLARETLLTSEEAVIAAAAAEAVALAKAAVKVAKDAARLVGKNNSAKSETKP 148

Query: 541  SS--SDAEIKWLERMSLIGTE-LGGTNHFADAETEYPQANFSPDQFLHTDCFSFTYSESQ 711
            +S  S  +     R+    TE +G       AET     N   D    +D    T  E +
Sbjct: 149  ASFLSGDDTSQFRRIQFTETERIGILGDSVGAETGMVDYNSLQDVTEDSDDLEPTLEELE 208

Query: 712  M--TEHAESIAVGSXXXXXXXXXXXXXXXXXXXGVTSLKSGLSGRKKR-SMQEVDYSDPX 882
            +   E ++SI V S                   GV S++SG + R+KR S+QEVDYSDP 
Sbjct: 209  LLEAEFSKSIVVRSNRQVERKARRARAAEKASAGVVSVRSGSTSRRKRVSLQEVDYSDPL 268

Query: 883  XXXXXXXXXXXXXXAAEEIRLSEGIQDLLKLERLKETLAERHGCQPTFAQWAAAAGVDRK 1062
                          A EE+ LSEGIQDLLKLE+L+E L ER G +PTFAQWAAAAGVD+K
Sbjct: 269  RYLRGTTSTSRLLTATEELELSEGIQDLLKLEKLQEDLEERFGVKPTFAQWAAAAGVDQK 328

Query: 1063 SLRKRLTLGTFSKDKMIKSNIRLVISIAKNYLGTGLNIQDLVQEGCRGLVRGAEKFDASK 1242
            +LR+R   G   KDKMIKSNIRLVISIAKNY G G+NIQDLVQEGCRGLVRGAEKFDASK
Sbjct: 329  TLRRRTNYGIRCKDKMIKSNIRLVISIAKNYQGAGMNIQDLVQEGCRGLVRGAEKFDASK 388

Query: 1243 GFKFSTYAHWWIKQSVRKFLSEHSRTIRLPYHMVEASYRVREAEKRLHRENGRHPGTEEV 1422
            GFKFSTYAHWWIKQ+VRK LS+ SRTIRLP+HMVEA+YRV+EA K+L+ ENGRHP  EEV
Sbjct: 389  GFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPNNEEV 448

Query: 1423 AVATGLSMKKLEAVMLTPKAPISLDQKIGFNESLKPTDVIAHPDAETSEDMLIKQFMRQD 1602
            A ATGLSMK+L AV+LTPKAP SLDQKIG N++LKP++VIA PDAET+E++LIKQFMR+D
Sbjct: 449  AEATGLSMKRLNAVLLTPKAPRSLDQKIGINQNLKPSEVIADPDAETAEELLIKQFMRED 508

Query: 1603 LNKVLDTLNPKEKQVVRWRFGLEDGRMKTLQEIGELMGVSRERVRQIEXXXXXXXXXXXX 1782
            L KVL++LNP+EKQV+RWR+GLEDGR KTLQEIGELMGVSRER+RQIE            
Sbjct: 509  LEKVLNSLNPREKQVIRWRYGLEDGRTKTLQEIGELMGVSRERIRQIESCAFRKLKNKRR 568

Query: 1783 TNNLRQYIVT 1812
            T +L+QY+V+
Sbjct: 569  TKHLQQYLVS 578


>ref|XP_004303327.1| PREDICTED: RNA polymerase sigma factor sigB-like [Fragaria vesca
            subsp. vesca]
          Length = 616

 Score =  490 bits (1262), Expect = e-136
 Identities = 271/534 (50%), Positives = 342/534 (64%), Gaps = 8/534 (1%)
 Frame = +1

Query: 235  HCLLSPTTSVIDFGQIDKLEARSTSSPSCVIKPLAYVGAVGPPTKTGIQMTLASDKLLSD 414
            H   +PT +++D  +         S    V +P  Y GA+GPPT+      LA++ LL+ 
Sbjct: 86   HSTSTPTATLLDMEEFSLPSLTVNSDSLIVNRPWTYTGAIGPPTEANYGAALATETLLTS 145

Query: 415  XXXXXXXXXXXXXXXXXXXXXXXXXXXKMMGMNPFVEVENLE----SSSDAEIKWLERMS 582
                                        ++  N + +VEN       +S   I W + + 
Sbjct: 146  EEAVIAAAAAEAVTLAKAALKVAKDVALLVSNNHYAKVENSSPVSCGTSAFHINWAQHLE 205

Query: 583  LIGTELGGTNHFADA---ETEYPQANFSPDQFLHTDCFSFTYSESQMTEHAESIAVGSXX 753
               T   G +  ++    E  + Q   +  + +      F   + Q++     IA  S  
Sbjct: 206  TEPTLRIGDSMASETALVEDHFLQIAINESENVEPANEEFELLQEQLSN---GIAARSSR 262

Query: 754  XXXXXXXXXXXXXXXXXGVTSLKSGLSGRKKR-SMQEVDYSDPXXXXXXXXXXXXXXXAA 930
                              + S+KSG + RKKR S+Q+VD+SDP               A 
Sbjct: 263  QTERKARRTRAAEKAAASIVSVKSGSTSRKKRASLQDVDHSDPLRYLRATTHTSRLLTAN 322

Query: 931  EEIRLSEGIQDLLKLERLKETLAERHGCQPTFAQWAAAAGVDRKSLRKRLTLGTFSKDKM 1110
            EEI LSEGIQ+LLKLE+L+E LA+R G QPTFAQWAAAAGVD+K+LRKR+  G   KDKM
Sbjct: 323  EEIELSEGIQELLKLEKLQEDLAQRCGTQPTFAQWAAAAGVDQKTLRKRVNYGIMCKDKM 382

Query: 1111 IKSNIRLVISIAKNYLGTGLNIQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQSV 1290
            IKSNIRLVISIAKNY G G+N+QDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQ+V
Sbjct: 383  IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAV 442

Query: 1291 RKFLSEHSRTIRLPYHMVEASYRVREAEKRLHRENGRHPGTEEVAVATGLSMKKLEAVML 1470
            RK LS+ SRTIRLP+HMVEA+YRVREA+K+L+  NGRHP  EEVA ATGLSMK+L AV+L
Sbjct: 443  RKSLSDQSRTIRLPFHMVEATYRVREAKKQLYSVNGRHPNDEEVAEATGLSMKRLAAVLL 502

Query: 1471 TPKAPISLDQKIGFNESLKPTDVIAHPDAETSEDMLIKQFMRQDLNKVLDTLNPKEKQVV 1650
            TPKAP SL+QKIG N++LKP+DVIA PDAET+ED+L+K+FM+QDL KVLD+LNP+EKQV+
Sbjct: 503  TPKAPRSLEQKIGINQNLKPSDVIADPDAETAEDLLMKKFMKQDLEKVLDSLNPREKQVI 562

Query: 1651 RWRFGLEDGRMKTLQEIGELMGVSRERVRQIEXXXXXXXXXXXXTNNLRQYIVT 1812
            RWRFG+EDGRMKTLQEIGELMGVSRER+RQIE            T +L+QY+++
Sbjct: 563  RWRFGMEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVLS 616


>ref|XP_006878613.1| hypothetical protein AMTR_s00011p00258380 [Amborella trichopoda]
            gi|548831956|gb|ERM94758.1| hypothetical protein
            AMTR_s00011p00258380 [Amborella trichopoda]
          Length = 570

 Score =  489 bits (1259), Expect = e-135
 Identities = 276/547 (50%), Positives = 347/547 (63%), Gaps = 11/547 (2%)
 Frame = +1

Query: 205  KARDFVHLQIHCLLSPTTSVIDFGQIDKLEARSTSSPSCVIK---PLAYVGAVGPPTKTG 375
            + R+    Q  C+ S  T V+D   +DK+   S    S  +    PL YVG +G   KT 
Sbjct: 27   RTREATCFQTQCVSSTATVVVD---VDKVRVPSLGGHSTSVSTHGPLTYVGTIGSQKKTD 83

Query: 376  IQMTLASDKLLSDXXXXXXXXXXXXXXXXXXXXXXXXXXXKMMGMNPFVEVENLES-SSD 552
             +  L ++ LL                              M+G  P    + ++   S+
Sbjct: 84   FEAALVTESLLKSEEAIIAAAAAEAIALAKAAAKLAKDAALMVGSVPPSRSDKVDDFPSE 143

Query: 553  AEIKWLER-----MSLIGTELGGTNHFADAETEYPQAN-FSPDQFLHTDCFSFTYSESQM 714
            A+I  L+R     M  IG+  G +        ++   N  SP++            E+  
Sbjct: 144  ADILRLQRARLTEMERIGSMDGSSIAGIGPRDKHKSVNQLSPNEMADKQSRE-NILEALQ 202

Query: 715  TEHAESIAVGSXXXXXXXXXXXXXXXXXXXGVTSLKSGLSGRKKRS-MQEVDYSDPXXXX 891
             +H++ +AV S                      ++K G + R+KR+ +QE+DYSDP    
Sbjct: 203  LQHSQRVAVRSRRQTERRARRAKGVEKAAANAITVKLGTTSRRKRAPLQEIDYSDPLRYL 262

Query: 892  XXXXXXXXXXXAAEEIRLSEGIQDLLKLERLKETLAERHGCQPTFAQWAAAAGVDRKSLR 1071
                       A EE+ LSEGIQDLLKLE+L + L ER G +PTF QWAAAAG+D+K+LR
Sbjct: 263  RGTTNSTKLLTATEELELSEGIQDLLKLEKLHKELTERFGGEPTFVQWAAAAGIDQKALR 322

Query: 1072 KRLTLGTFSKDKMIKSNIRLVISIAKNYLGTGLNIQDLVQEGCRGLVRGAEKFDASKGFK 1251
            +RL+ GT  KDKMIKSNIRLVISIAKNY G GL+IQDLVQEGCRGLVRGAEKFDASKGFK
Sbjct: 323  RRLSYGTHCKDKMIKSNIRLVISIAKNYQGVGLSIQDLVQEGCRGLVRGAEKFDASKGFK 382

Query: 1252 FSTYAHWWIKQSVRKFLSEHSRTIRLPYHMVEASYRVREAEKRLHRENGRHPGTEEVAVA 1431
            FSTYAHWWIKQ+VRK LS+ SRTIRLP+HMV+A+YRVREA K+L+ ENGRHP  EEVA A
Sbjct: 383  FSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVDATYRVREATKQLYSENGRHPNDEEVAEA 442

Query: 1432 TGLSMKKLEAVMLTPKAPISLDQKIGFNESLKPTDVIAHPDAETSEDMLIKQFMRQDLNK 1611
            TGLSMK+L  V+LTPKAP SLDQKIG N++LKP++VI+ P+AET+ED+L+KQFM+QDL K
Sbjct: 443  TGLSMKRLTTVLLTPKAPRSLDQKIGINQNLKPSEVISDPEAETAEDLLMKQFMKQDLEK 502

Query: 1612 VLDTLNPKEKQVVRWRFGLEDGRMKTLQEIGELMGVSRERVRQIEXXXXXXXXXXXXTNN 1791
            VL+TLNP+EKQVVRWRFGLEDGRMKTLQEIGELMGVSRER+RQIE            T N
Sbjct: 503  VLNTLNPREKQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESSAFRKLKNKKRTKN 562

Query: 1792 LRQYIVT 1812
            LRQY+++
Sbjct: 563  LRQYLLS 569


>ref|XP_006484754.1| PREDICTED: RNA polymerase sigma factor sigB-like isoform X1 [Citrus
            sinensis]
          Length = 605

 Score =  482 bits (1240), Expect = e-133
 Identities = 280/556 (50%), Positives = 353/556 (63%), Gaps = 20/556 (3%)
 Frame = +1

Query: 205  KARDFVHLQIHCLLSPT--------TSVIDFGQIDKLEARSTSSPSCVIKPLAYVGAVGP 360
            K+++ +  + HC+LS T        T+V+D  ++      + S+     +   Y GAVGP
Sbjct: 57   KSKEPICFRTHCVLSTTSPSTSTAMTTVLDVEKLRLPSLEAHSNAVAANRQWTYFGAVGP 116

Query: 361  PTKTGIQMTLASDKLLSDXXXXXXXXXXXXXXXXXXXXXXXXXXXKMMGMN-------PF 519
             T+  +  +LA++ L SD                            +   N       P 
Sbjct: 117  STEENLGTSLATETLTSDEAVIAAASAEAVALARAAVKVAKDAALMVNHHNSAKPKSKPA 176

Query: 520  VEVE-NLESSSDAEIKWLERMSLIGTELGGTNHFADAETEYPQANFSPDQFLHTDC-FSF 693
            + +  +  +S  A++   ER S+IG  +       +A    P+  +S  Q L+       
Sbjct: 177  ISLSADTNTSMWAQLTERERASIIGDSV-----IVEAA---PEEEYSEQQPLNKSADLEP 228

Query: 694  TYSESQMTEH--AESIAVGSXXXXXXXXXXXXXXXXXXXGVTSLKSGLSGRKKR-SMQEV 864
            T+ E ++ E   ++SIAV S                    V S+KSG + R+KR S+QEV
Sbjct: 229  THEELKLLEEQVSQSIAVRSRRQTERKARRTRAAEKAAANVMSVKSGSTSRRKRPSVQEV 288

Query: 865  DYSDPXXXXXXXXXXXXXXXAAEEIRLSEGIQDLLKLERLKETLAERHGCQPTFAQWAAA 1044
            DYSDP               A EE++LS GIQDLLKLE L+E L+ER G  PTFAQWAAA
Sbjct: 289  DYSDPLRYLRATTSSSRLLTANEEMQLSAGIQDLLKLEGLREVLSERCGGSPTFAQWAAA 348

Query: 1045 AGVDRKSLRKRLTLGTFSKDKMIKSNIRLVISIAKNYLGTGLNIQDLVQEGCRGLVRGAE 1224
            AGVD++ LR+RL  G   KDKMI SNIRLVISIAKNY G G+N+QDLVQEGCRGLVRGAE
Sbjct: 349  AGVDQRELRRRLNYGILCKDKMITSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAE 408

Query: 1225 KFDASKGFKFSTYAHWWIKQSVRKFLSEHSRTIRLPYHMVEASYRVREAEKRLHRENGRH 1404
            KFDASKGFKFSTYAHWWIKQ+VRK LS+ SRTIRLP+HMVEA+YRV+EA K+L+ ENGRH
Sbjct: 409  KFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRH 468

Query: 1405 PGTEEVAVATGLSMKKLEAVMLTPKAPISLDQKIGFNESLKPTDVIAHPDAETSEDMLIK 1584
            P  EEVA ATGLSMK+L AV+LTPKAP SLDQK G N++LKP++VIA P+AET+ED+LIK
Sbjct: 469  PNNEEVAEATGLSMKRLHAVLLTPKAPRSLDQKFGINQNLKPSEVIADPEAETAEDLLIK 528

Query: 1585 QFMRQDLNKVLDTLNPKEKQVVRWRFGLEDGRMKTLQEIGELMGVSRERVRQIEXXXXXX 1764
            +FM++DL KVLDTLNP+E+QVVRWRFGLEDGRMKTLQEIGELMGVSRER+RQIE      
Sbjct: 529  KFMKEDLEKVLDTLNPRERQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESSAFRK 588

Query: 1765 XXXXXXTNNLRQYIVT 1812
                  T +L QY +T
Sbjct: 589  LKNKKRTKHLMQYAIT 604


>gb|EOY10370.1| RNApolymerase sigma subunit 2 [Theobroma cacao]
          Length = 623

 Score =  482 bits (1240), Expect = e-133
 Identities = 280/558 (50%), Positives = 347/558 (62%), Gaps = 22/558 (3%)
 Frame = +1

Query: 205  KARDFVHLQIHCLLSPTTSVIDFGQIDKLEARSTSSPS--------CVIKPLAYVGAVGP 360
            K ++ +  +  C+LS T+S         L+      PS         V +P  Y+GA GP
Sbjct: 64   KHKEHICFRTQCVLSTTSSSTSTTATAVLDVEKLRLPSFEAHPNSVAVDRPWTYIGATGP 123

Query: 361  PTKTGIQMTLASDKLLSDXXXXXXXXXXXXXXXXXXXXXXXXXXXKMMGMNPFVEVENLE 540
            P++  +  TLA+D LL+                             M     + + E   
Sbjct: 124  PSEASLGATLATDNLLTSDEAVIAAAAAEAVALARAAVKVAKDAALMAENYNYAKTEMKS 183

Query: 541  SSSDAEIKWLERMSLIGTELGGTNHFADA---ETEYPQANFSPDQFLHTDCFSFTYSESQ 711
              S A   +  + +L  TE        D+   E+E  + +   +    +D    T  E +
Sbjct: 184  GVSFATDSFTSKWALF-TEAERAGIIGDSPTDESEMEEDDSEQNSTTESDELEPTNEELE 242

Query: 712  MTEH--AESIAVGSXXXXXXXXXXXXXXXXXXXGVTSLKSGLSGRKKR-SMQEVDYSDPX 882
              E   + SIAV S                    V S+KSG + RK+R ++Q+VDYSDP 
Sbjct: 243  HLEEQLSRSIAVRSRRQTERKAKRTRAAEKAAANVVSVKSGSTNRKRRGALQDVDYSDPL 302

Query: 883  XXXXXXXXXXXXXXAAEEIRLSEGIQDLLKLERLKETLAERHGCQPTFAQWAAAAGVDRK 1062
                          A EE+ LSEGIQDLLKLERL+E LAER G QPTFAQWAAAAGVD+K
Sbjct: 303  RYLRGTTSTSRLLTANEELELSEGIQDLLKLERLQEELAERCGGQPTFAQWAAAAGVDQK 362

Query: 1063 SLRKRLTLGTFSKDKMIKSNIRLVISIAKNYLGTGLNIQDLVQEGCRGLVRGAEKFDASK 1242
            +LR RL  G   KDKMIKSNIRLVISIAKNY G G+N+QDLVQEGCRGLVRGAEKFDASK
Sbjct: 363  TLRSRLNYGVHCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASK 422

Query: 1243 GFKFSTYAHWWIKQSVRKFLSEHSRTIRLPYHMVEASYRVREAEKRLHRENGRHPGTEEV 1422
            GFKFSTYAHWWIKQ+VRK LS+ SRTIRLP+HMVEA+YRV+EA K+L+ ENGRHP  EEV
Sbjct: 423  GFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDNEEV 482

Query: 1423 AVATGLSMKKLEAVMLTPKAPISLDQKIGFNESLKPT--------DVIAHPDAETSEDML 1578
            A ATGLSMK+L AV+LTPKAP SLDQKIG N++LKP+        +VIA P+AET+EDML
Sbjct: 483  AEATGLSMKRLTAVLLTPKAPRSLDQKIGINQNLKPSVCPVSSLAEVIADPEAETAEDML 542

Query: 1579 IKQFMRQDLNKVLDTLNPKEKQVVRWRFGLEDGRMKTLQEIGELMGVSRERVRQIEXXXX 1758
            IKQFMR+DL KVLD+L+ +E+QV+RWRFG+EDGRMKTLQEIGELMGVSRER+RQIE    
Sbjct: 543  IKQFMRKDLEKVLDSLSQRERQVIRWRFGMEDGRMKTLQEIGELMGVSRERIRQIESCAF 602

Query: 1759 XXXXXXXXTNNLRQYIVT 1812
                    T +L+QY+++
Sbjct: 603  RKLKNKKRTKHLQQYLLS 620


>ref|XP_006437338.1| hypothetical protein CICLE_v10030998mg [Citrus clementina]
            gi|557539534|gb|ESR50578.1| hypothetical protein
            CICLE_v10030998mg [Citrus clementina]
          Length = 605

 Score =  479 bits (1233), Expect = e-132
 Identities = 279/556 (50%), Positives = 352/556 (63%), Gaps = 20/556 (3%)
 Frame = +1

Query: 205  KARDFVHLQIHCLLSPT--------TSVIDFGQIDKLEARSTSSPSCVIKPLAYVGAVGP 360
            K+++ +  + HC+LS T        T+V+D  ++      + S+     +   Y GAVGP
Sbjct: 57   KSKEPICFRTHCVLSTTSPSTSTAMTTVLDVEKLRLPSLEAHSNAVAANRQWTYFGAVGP 116

Query: 361  PTKTGIQMTLASDKLLSDXXXXXXXXXXXXXXXXXXXXXXXXXXXKMMGMN-------PF 519
             T+  +  +LA++ L SD                            +   N       P 
Sbjct: 117  STEENLGTSLATETLTSDEAVIAAASAEAVALARAAVKVAKDAALMVNHHNSAKPKSKPA 176

Query: 520  VEVE-NLESSSDAEIKWLERMSLIGTELGGTNHFADAETEYPQANFSPDQFLHTDC-FSF 693
            + +  +  +S  A++   ER S+IG  +       +A    P+  +S  Q L+       
Sbjct: 177  ISLSADTSTSMWAQLTERERASIIGDSV-----IVEAA---PEEEYSEQQPLNKSADLEP 228

Query: 694  TYSESQMTEH--AESIAVGSXXXXXXXXXXXXXXXXXXXGVTSLKSGLSGRKKR-SMQEV 864
            T+ E ++ E   ++SIAV S                    V S+KSG + R+KR S+QEV
Sbjct: 229  THEELKLLEEQVSQSIAVRSRRQTERKARRTRAAEKAAANVMSVKSGSTTRRKRPSVQEV 288

Query: 865  DYSDPXXXXXXXXXXXXXXXAAEEIRLSEGIQDLLKLERLKETLAERHGCQPTFAQWAAA 1044
            DYSDP               A EE++LS GIQDLLKLE L+E L+ER G  PTFAQWAAA
Sbjct: 289  DYSDPLRYLRATTSSSRLLTANEEMQLSAGIQDLLKLEGLREVLSERCGGSPTFAQWAAA 348

Query: 1045 AGVDRKSLRKRLTLGTFSKDKMIKSNIRLVISIAKNYLGTGLNIQDLVQEGCRGLVRGAE 1224
            AGVD++ LR+RL  G   KDKMI SNIRLVISIAKNY G G+N+QDLVQEGCRGLVRGAE
Sbjct: 349  AGVDQRELRRRLNYGILCKDKMITSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAE 408

Query: 1225 KFDASKGFKFSTYAHWWIKQSVRKFLSEHSRTIRLPYHMVEASYRVREAEKRLHRENGRH 1404
            KFDASKGFKFSTYAHWWIKQ+VRK LS+ SRTIRLP+HMVEA+YRV+EA K+L+ ENGRH
Sbjct: 409  KFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRH 468

Query: 1405 PGTEEVAVATGLSMKKLEAVMLTPKAPISLDQKIGFNESLKPTDVIAHPDAETSEDMLIK 1584
            P  EEVA ATGLSMK+L AV+L PKAP SLDQK G N++LKP++VIA P+AET+ED+LIK
Sbjct: 469  PNNEEVAKATGLSMKRLHAVLLAPKAPRSLDQKFGINQNLKPSEVIADPEAETAEDLLIK 528

Query: 1585 QFMRQDLNKVLDTLNPKEKQVVRWRFGLEDGRMKTLQEIGELMGVSRERVRQIEXXXXXX 1764
            +FM++DL KVLDTLNP+E+QVVRWRFGLEDGRMKTLQEIGELMGVSRER+RQIE      
Sbjct: 529  KFMKEDLEKVLDTLNPRERQVVRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESSAFRK 588

Query: 1765 XXXXXXTNNLRQYIVT 1812
                  T +L QY +T
Sbjct: 589  LKNKKRTKHLMQYAIT 604


>ref|XP_002523972.1| RNA polymerase sigma factor rpoD1, putative [Ricinus communis]
            gi|223536699|gb|EEF38340.1| RNA polymerase sigma factor
            rpoD1, putative [Ricinus communis]
          Length = 569

 Score =  477 bits (1227), Expect = e-132
 Identities = 276/550 (50%), Positives = 347/550 (63%), Gaps = 15/550 (2%)
 Frame = +1

Query: 205  KARDFVHLQIHCLLSPT-----TSVIDFGQIDKLEARSTSSPSCVIKPLAYVGAVGPPTK 369
            K+R+ ++ +  C+LS T     T+V+D   ++KL   S  +PS  I P +      P T 
Sbjct: 35   KSREPIYYRAQCILSTTSPSTSTAVLD---LEKLRLPSFEAPSDSIAPNS------PWTY 85

Query: 370  TGIQMTLASDKLLSDXXXXXXXXXXXXXXXXXXXXXXXXXXXKMMGMNPFVEVEN----- 534
                 TLA++ L++                             ++   P  E E+     
Sbjct: 86   ATFGSTLATETLITSDEAVIAAAAAEAVALARAAVKVAKDAALLVKNFPSAETESKLTSP 145

Query: 535  --LESSSDAEIKWLERMSLIGTELGGTNHFADAETEYPQANFSPDQFLHTDCFSFTYSES 708
              +++S   +    ER  +IG  +         ET   + +        +D    T+ E 
Sbjct: 146  STIDASRWPQFTETERARIIGDSVA-------TETGPREESSMQSSIKESDYLELTHKEL 198

Query: 709  QMTEH--AESIAVGSXXXXXXXXXXXXXXXXXXXGVTSLKSGLSGRKKR-SMQEVDYSDP 879
            ++ +   +E IAV S                    V S+K G + +KKR S+QEVDYSDP
Sbjct: 199  ELLQKQLSEGIAVRSRRQTERKARRARAVEKAASSVVSVKPGSTSKKKRGSLQEVDYSDP 258

Query: 880  XXXXXXXXXXXXXXXAAEEIRLSEGIQDLLKLERLKETLAERHGCQPTFAQWAAAAGVDR 1059
                           A+EE+ LS  IQDLLKLERL+E LAER+G QPTFAQWAAAAGVD+
Sbjct: 259  LRYLRGTTSTSRLLTASEELELSAAIQDLLKLERLQEELAERYGGQPTFAQWAAAAGVDQ 318

Query: 1060 KSLRKRLTLGTFSKDKMIKSNIRLVISIAKNYLGTGLNIQDLVQEGCRGLVRGAEKFDAS 1239
            ++LRKR+  GT  KDKMIKSNIRLVISIAKNY G G+N+QDLVQEGCRGLVRGAEKFDAS
Sbjct: 319  RTLRKRINHGTICKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDAS 378

Query: 1240 KGFKFSTYAHWWIKQSVRKFLSEHSRTIRLPYHMVEASYRVREAEKRLHRENGRHPGTEE 1419
            KGFKFSTYAHWWIKQ+VRK LS+ SRTIRLP+HMVEA+YRV+EA K+L+ ENGRHP  EE
Sbjct: 379  KGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEE 438

Query: 1420 VAVATGLSMKKLEAVMLTPKAPISLDQKIGFNESLKPTDVIAHPDAETSEDMLIKQFMRQ 1599
            VA A GLSMK+L AV+LTPKAP SLDQKIG N  LKP++VIA P+AET+E++L+KQFM+Q
Sbjct: 439  VAEAAGLSMKRLSAVLLTPKAPRSLDQKIGMNMDLKPSEVIADPEAETAEELLMKQFMKQ 498

Query: 1600 DLNKVLDTLNPKEKQVVRWRFGLEDGRMKTLQEIGELMGVSRERVRQIEXXXXXXXXXXX 1779
            DL KVL+TLNP+E QVVRWRFGLEDGRMKTLQEIGE+MGVSRER+RQIE           
Sbjct: 499  DLEKVLNTLNPRETQVVRWRFGLEDGRMKTLQEIGEIMGVSRERIRQIESSAFRKLKNKK 558

Query: 1780 XTNNLRQYIV 1809
             T  L+QY++
Sbjct: 559  RTKQLKQYLL 568


>ref|XP_004229543.1| PREDICTED: RNA polymerase sigma factor sigB-like [Solanum
            lycopersicum]
          Length = 613

 Score =  476 bits (1226), Expect = e-131
 Identities = 288/585 (49%), Positives = 348/585 (59%), Gaps = 51/585 (8%)
 Frame = +1

Query: 205  KARDFVHLQIHCLLSPTTSVIDFGQ-----IDKLEA-------------RSTSSPSCVI- 327
            K+RD +HL+  C+LS T++V          I+KL+              RS  SPS    
Sbjct: 31   KSRDSIHLRTQCILSTTSAVTSTATSTVLGIEKLQLPSIEILSNSVAAERSWKSPSAATT 90

Query: 328  -----------------------KPLAYVGAVGPPTKTGIQMTLASDKLLSDXXXXXXXX 438
                                   +P  Y GAVGPP +     T   D L S+        
Sbjct: 91   TVPGIQKLKLPSFEANPDSVAPDRPWTYTGAVGPPAEAN---TKPEDSLASEEAIVAAAA 147

Query: 439  XXXXXXXXXXXXXXXXXXXKMMGMNPFVEVENLESSSDAEIKWLERMSLIGTELGGTN-- 612
                                ++G N   + +N+   + +E +     S+   + G T   
Sbjct: 148  AEAVALAKAALKGAQDAVM-LVGYNNLKDSDNVGRGTLSEARTAPFESVHLAQPGETRGV 206

Query: 613  ----HFADAETEYPQANFSPDQFLHTDCFSFTYSESQMTEHAES--IAVGSXXXXXXXXX 774
                    +E ++  ++   D    +D    ++ E ++ +   S  IAV S         
Sbjct: 207  GVCAELNGSEMKWTGSSLFRDTLTDSDDLEPSHEELEILQSQLSNVIAVKSNRQTERKAR 266

Query: 775  XXXXXXXXXXGVTSLKSGLSGRKKR-SMQEVDYSDPXXXXXXXXXXXXXXXAAEEIRLSE 951
                       V S+KSG + RKKR S+Q+VDYSDP               A+EE  LS 
Sbjct: 267  RAKAVERAAANVVSVKSGSTSRKKRASVQDVDYSDPLRYLRGTTCSSRLLTASEEQELSR 326

Query: 952  GIQDLLKLERLKETLAERHGCQPTFAQWAAAAGVDRKSLRKRLTLGTFSKDKMIKSNIRL 1131
            GIQDLLKLERL+  L ER G QPTF QWAAAAGVD+ +LRKRL  G   KDKMIKSN+RL
Sbjct: 327  GIQDLLKLERLQVELTERCGGQPTFTQWAAAAGVDQMTLRKRLNYGILCKDKMIKSNVRL 386

Query: 1132 VISIAKNYLGTGLNIQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQSVRKFLSEH 1311
            VISIAKNY G G+N+QDLVQEGCRGLVRGAEKFDA+KGFKFSTYAHWWIKQ+VRK LS+ 
Sbjct: 387  VISIAKNYQGVGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQ 446

Query: 1312 SRTIRLPYHMVEASYRVREAEKRLHRENGRHPGTEEVAVATGLSMKKLEAVMLTPKAPIS 1491
            SRTIRLP+HMVEA+YRV+EA K+L  ENGRHP   EVA ATGLSMK+L AVMLTPKAP S
Sbjct: 447  SRTIRLPFHMVEATYRVKEARKQLLTENGRHPNDAEVAEATGLSMKRLAAVMLTPKAPRS 506

Query: 1492 LDQKIGFNESLKPTDVIAHPDAETSEDMLIKQFMRQDLNKVLDTLNPKEKQVVRWRFGLE 1671
            LDQK+GFNESLKP++V+A PDAETSE++L KQFMRQDL KVLDTLNP+EKQVVRWRFGLE
Sbjct: 507  LDQKVGFNESLKPSEVLADPDAETSEEILTKQFMRQDLEKVLDTLNPREKQVVRWRFGLE 566

Query: 1672 DGRMKTLQEIGELMGVSRERVRQIEXXXXXXXXXXXXTNNLRQYI 1806
            DGRMKTLQEIGELMGVSRER+RQIE            T  L+QYI
Sbjct: 567  DGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKFLQQYI 611


>gb|EXB70625.1| RNA polymerase sigma factor rpoD [Morus notabilis]
          Length = 574

 Score =  476 bits (1224), Expect = e-131
 Identities = 275/545 (50%), Positives = 343/545 (62%), Gaps = 9/545 (1%)
 Frame = +1

Query: 205  KARDFVHLQIHCLLSPTTSVIDFG-----QIDKLEARSTSSPSCVI---KPLAYVGAVGP 360
            KARD   L   C+LS T+     G      ++KL   S  + S  +   +P  Y GA GP
Sbjct: 35   KARDINSLA-QCVLSTTSPSTSVGATYVLSVEKLRFPSLDANSESVTSNRPWTYTGATGP 93

Query: 361  PTKTGIQMTLASDKLLSDXXXXXXXXXXXXXXXXXXXXXXXXXXXKMMGMNPFVEVENLE 540
            P +   + TLA++ LL+                             ++  +   E  +L 
Sbjct: 94   PVEANFEATLATETLLTSEEAVIAAAAAEAVTLAKAAVKVAKDAALLVRPSTRAESISLV 153

Query: 541  SSSDAEIKWLERMSLIGTELGGTNHFADAETEYPQANFSPDQFLHTDCFSFTYSESQMTE 720
            SS    IK  +  S +   L      A  E   P+        L          + Q+++
Sbjct: 154  SSEARNIKTAQAASRVRDSLRA--EMALIEDHPPKDAAKESNDLQPTNEELRILQEQLSK 211

Query: 721  HAESIAVGSXXXXXXXXXXXXXXXXXXXGVTSLKSGLSGRKKR-SMQEVDYSDPXXXXXX 897
               SIAV S                    V ++KSG + RKKR S+Q+VD+SDP      
Sbjct: 212  ---SIAVRSRRQSERKAKRDRAAEKAAANVVAVKSGSNSRKKRASVQDVDHSDPLRYLRS 268

Query: 898  XXXXXXXXXAAEEIRLSEGIQDLLKLERLKETLAERHGCQPTFAQWAAAAGVDRKSLRKR 1077
                     A EEI LSEGIQDLLKLE+L+E LAER G  PTFAQWAAAAGVD+K+LR+R
Sbjct: 269  TTSTSRLLTATEEIELSEGIQDLLKLEKLQEELAERCGGPPTFAQWAAAAGVDQKTLRRR 328

Query: 1078 LTLGTFSKDKMIKSNIRLVISIAKNYLGTGLNIQDLVQEGCRGLVRGAEKFDASKGFKFS 1257
            +  G   KDKMIKSN+RLVISIAKNY G G+N+QDLVQEGCRGLVRGAEKFDASKGFKFS
Sbjct: 329  INYGILCKDKMIKSNVRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFS 388

Query: 1258 TYAHWWIKQSVRKFLSEHSRTIRLPYHMVEASYRVREAEKRLHRENGRHPGTEEVAVATG 1437
            TYAHWWIKQ+VRK LS+ SRTIRLP+HMVEA+YRV+EA K+L+ ENGR P  EEVA ATG
Sbjct: 389  TYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRQPNDEEVAEATG 448

Query: 1438 LSMKKLEAVMLTPKAPISLDQKIGFNESLKPTDVIAHPDAETSEDMLIKQFMRQDLNKVL 1617
            LSMK+L AV+LTPKAP SL+QKIG N++LKP+++IA PDAET ED+L +QFM+QDL+KVL
Sbjct: 449  LSMKRLAAVLLTPKAPRSLEQKIGINQNLKPSEIIADPDAETLEDVLTRQFMKQDLDKVL 508

Query: 1618 DTLNPKEKQVVRWRFGLEDGRMKTLQEIGELMGVSRERVRQIEXXXXXXXXXXXXTNNLR 1797
            D+LN +EKQV+RWRFG++DGRMKTLQEIGELMGVSRER+RQIE            T +L+
Sbjct: 509  DSLNQREKQVIRWRFGMDDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQ 568

Query: 1798 QYIVT 1812
            QY+++
Sbjct: 569  QYLIS 573


>ref|XP_004145011.1| PREDICTED: RNA polymerase sigma factor sigB-like [Cucumis sativus]
            gi|449473951|ref|XP_004154029.1| PREDICTED: RNA
            polymerase sigma factor sigB-like [Cucumis sativus]
          Length = 580

 Score =  476 bits (1224), Expect = e-131
 Identities = 252/415 (60%), Positives = 300/415 (72%), Gaps = 1/415 (0%)
 Frame = +1

Query: 571  ERMSLIGTELGGTNHFADAETEYPQANFSPDQFLHTDCFSFTYSESQMTEHAESIAVGSX 750
            ER  +IG  +G      + +   P    S D    ++       E    E +ESI V S 
Sbjct: 171  ERADIIGEPVGVNKRPMEGDALEPSTTESDDMEPTSEEL-----ELLQDELSESITVKSK 225

Query: 751  XXXXXXXXXXXXXXXXXXGVTSLKSGLSGRKKR-SMQEVDYSDPXXXXXXXXXXXXXXXA 927
                               V S KSG S RKKR S+QEVDYSDP               A
Sbjct: 226  RQTERKARRTRAAEKTVTSVLSFKSGSSSRKKRNSVQEVDYSDPLRYLRATTNTSRLLTA 285

Query: 928  AEEIRLSEGIQDLLKLERLKETLAERHGCQPTFAQWAAAAGVDRKSLRKRLTLGTFSKDK 1107
             EE+ LSEGIQDLLKLERL+E L ER+G +PTFAQWAAAAGV++++LRKRL  GT  KDK
Sbjct: 286  TEELELSEGIQDLLKLERLQEELGERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDK 345

Query: 1108 MIKSNIRLVISIAKNYLGTGLNIQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQS 1287
            MIKSNIRLVISIAKNY G G+N+QDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQ+
Sbjct: 346  MIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQA 405

Query: 1288 VRKFLSEHSRTIRLPYHMVEASYRVREAEKRLHRENGRHPGTEEVAVATGLSMKKLEAVM 1467
            VRKFLS+ SRTIRLP+HMVEA+YRV+EA K+L  ENGRHP  +E+A A GLSMK+L AV+
Sbjct: 406  VRKFLSDQSRTIRLPFHMVEATYRVKEARKQLLHENGRHPDDKEIAEAAGLSMKRLAAVL 465

Query: 1468 LTPKAPISLDQKIGFNESLKPTDVIAHPDAETSEDMLIKQFMRQDLNKVLDTLNPKEKQV 1647
            +TPKAP SL+QKIG N++LKP++VI+ P+AET EDMLIKQFM+QDL KVLD+LNP+EKQV
Sbjct: 466  MTPKAPRSLEQKIGINQNLKPSEVISDPEAETCEDMLIKQFMKQDLEKVLDSLNPREKQV 525

Query: 1648 VRWRFGLEDGRMKTLQEIGELMGVSRERVRQIEXXXXXXXXXXXXTNNLRQYIVT 1812
            +RWRFG+EDGRMKTLQEIGE+MGVSRER+RQIE            T +L+QY+++
Sbjct: 526  IRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVMS 580


>ref|XP_006484755.1| PREDICTED: RNA polymerase sigma factor sigB-like isoform X2 [Citrus
            sinensis]
          Length = 525

 Score =  475 bits (1223), Expect = e-131
 Identities = 274/531 (51%), Positives = 341/531 (64%), Gaps = 12/531 (2%)
 Frame = +1

Query: 256  TSVIDFGQIDKLEARSTSSPSCVIKPLAYVGAVGPPTKTGIQMTLASDKLLSDXXXXXXX 435
            T+V+D  ++      + S+     +   Y GAVGP T+  +  +LA++ L SD       
Sbjct: 2    TTVLDVEKLRLPSLEAHSNAVAANRQWTYFGAVGPSTEENLGTSLATETLTSDEAVIAAA 61

Query: 436  XXXXXXXXXXXXXXXXXXXXKMMGMN-------PFVEVE-NLESSSDAEIKWLERMSLIG 591
                                 +   N       P + +  +  +S  A++   ER S+IG
Sbjct: 62   SAEAVALARAAVKVAKDAALMVNHHNSAKPKSKPAISLSADTNTSMWAQLTERERASIIG 121

Query: 592  TELGGTNHFADAETEYPQANFSPDQFLHTDC-FSFTYSESQMTEH--AESIAVGSXXXXX 762
              +       +A    P+  +S  Q L+       T+ E ++ E   ++SIAV S     
Sbjct: 122  DSV-----IVEAA---PEEEYSEQQPLNKSADLEPTHEELKLLEEQVSQSIAVRSRRQTE 173

Query: 763  XXXXXXXXXXXXXXGVTSLKSGLSGRKKR-SMQEVDYSDPXXXXXXXXXXXXXXXAAEEI 939
                           V S+KSG + R+KR S+QEVDYSDP               A EE+
Sbjct: 174  RKARRTRAAEKAAANVMSVKSGSTSRRKRPSVQEVDYSDPLRYLRATTSSSRLLTANEEM 233

Query: 940  RLSEGIQDLLKLERLKETLAERHGCQPTFAQWAAAAGVDRKSLRKRLTLGTFSKDKMIKS 1119
            +LS GIQDLLKLE L+E L+ER G  PTFAQWAAAAGVD++ LR+RL  G   KDKMI S
Sbjct: 234  QLSAGIQDLLKLEGLREVLSERCGGSPTFAQWAAAAGVDQRELRRRLNYGILCKDKMITS 293

Query: 1120 NIRLVISIAKNYLGTGLNIQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQSVRKF 1299
            NIRLVISIAKNY G G+N+QDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQ+VRK 
Sbjct: 294  NIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKS 353

Query: 1300 LSEHSRTIRLPYHMVEASYRVREAEKRLHRENGRHPGTEEVAVATGLSMKKLEAVMLTPK 1479
            LS+ SRTIRLP+HMVEA+YRV+EA K+L+ ENGRHP  EEVA ATGLSMK+L AV+LTPK
Sbjct: 354  LSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRHPNNEEVAEATGLSMKRLHAVLLTPK 413

Query: 1480 APISLDQKIGFNESLKPTDVIAHPDAETSEDMLIKQFMRQDLNKVLDTLNPKEKQVVRWR 1659
            AP SLDQK G N++LKP++VIA P+AET+ED+LIK+FM++DL KVLDTLNP+E+QVVRWR
Sbjct: 414  APRSLDQKFGINQNLKPSEVIADPEAETAEDLLIKKFMKEDLEKVLDTLNPRERQVVRWR 473

Query: 1660 FGLEDGRMKTLQEIGELMGVSRERVRQIEXXXXXXXXXXXXTNNLRQYIVT 1812
            FGLEDGRMKTLQEIGELMGVSRER+RQIE            T +L QY +T
Sbjct: 474  FGLEDGRMKTLQEIGELMGVSRERIRQIESSAFRKLKNKKRTKHLMQYAIT 524


>ref|XP_006577887.1| PREDICTED: RNA polymerase sigma factor sigB-like [Glycine max]
          Length = 564

 Score =  474 bits (1219), Expect = e-131
 Identities = 268/541 (49%), Positives = 340/541 (62%), Gaps = 5/541 (0%)
 Frame = +1

Query: 205  KARDFVHLQIHCLLSPTTSVIDFGQIDKLEARSTSSPSCVIKPLAYVGAVGPPTKTGIQM 384
            K R  +  Q  C+LS T+         KL   + S P+       Y+ AV PP +   + 
Sbjct: 28   KTRPNLCFQPQCVLSATSPSTLLSLEKKLALDAPSDPNT---SWPYIAAVSPPLQANFKS 84

Query: 385  TLASDKLLSDXXXXXXXXXXXXXXXXXXXXXXXXXXXKMMGMNPFVEVENLE----SSSD 552
            TL+++ LL++                            ++   P  E E        S D
Sbjct: 85   TLSAESLLTNEEAVIVAAASEALALAKAAAKVAKDAALLVKKKPPAEAEYKSHVSSKSDD 144

Query: 553  AEIKWLERMSLIGTELGGTNHFADAETEYPQANFSPDQFLHTDCFSFTYSESQMTEHAES 732
              +KW ++M  +   +   +  A AE      + SP +       S    E    + ++S
Sbjct: 145  LLLKWFKQMEEVEDGVAEESMGAGAEI-MEGVDVSPSEEESDLEPSHEELERLQEQLSDS 203

Query: 733  IAVGSXXXXXXXXXXXXXXXXXXXGVTSLKSGLSGRKKR-SMQEVDYSDPXXXXXXXXXX 909
            IAV S                     TS K G S R+KR SMQEVDYSDP          
Sbjct: 204  IAVRSRRQTERKAKRVRATEKATTNFTSFKPGSSSRRKRVSMQEVDYSDPLRYLRTTTSA 263

Query: 910  XXXXXAAEEIRLSEGIQDLLKLERLKETLAERHGCQPTFAQWAAAAGVDRKSLRKRLTLG 1089
                   EEI+LS GIQDLLKLE+++E LAER G QPTFAQWAA AGVD+K+LRKRL  G
Sbjct: 264  SRLLTPTEEIKLSAGIQDLLKLEKIQEDLAERFGSQPTFAQWAAVAGVDQKTLRKRLNYG 323

Query: 1090 TFSKDKMIKSNIRLVISIAKNYLGTGLNIQDLVQEGCRGLVRGAEKFDASKGFKFSTYAH 1269
             F KDKMIKSNIRLVISIAKNY G+G+N+QDLVQEGCRGLV+GAEKFD +KGFKFSTYAH
Sbjct: 324  IFCKDKMIKSNIRLVISIAKNYQGSGMNLQDLVQEGCRGLVKGAEKFDGTKGFKFSTYAH 383

Query: 1270 WWIKQSVRKFLSEHSRTIRLPYHMVEASYRVREAEKRLHRENGRHPGTEEVAVATGLSMK 1449
            WWIKQ+VRK LS+ SRTIRLP+HMVEA+YRV+EA K+L+ ENGR P  EEVA ATGLSMK
Sbjct: 384  WWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRQPDDEEVAEATGLSMK 443

Query: 1450 KLEAVMLTPKAPISLDQKIGFNESLKPTDVIAHPDAETSEDMLIKQFMRQDLNKVLDTLN 1629
            +L AV++TPKAP SL+QKIG N++LKP++VI+ PDAET+E+ L+KQFM++DL + LD+LN
Sbjct: 444  RLNAVLMTPKAPRSLEQKIGINQNLKPSEVISDPDAETAEEQLLKQFMKKDLEEALDSLN 503

Query: 1630 PKEKQVVRWRFGLEDGRMKTLQEIGELMGVSRERVRQIEXXXXXXXXXXXXTNNLRQYIV 1809
            P+E+QVVRWRFG++DGR KTLQEIGE++GVSRER+RQIE            TN+L+QY+V
Sbjct: 504  PRERQVVRWRFGMDDGRTKTLQEIGEMLGVSRERIRQIESSAFKKLKNKKRTNHLQQYLV 563

Query: 1810 T 1812
            +
Sbjct: 564  S 564


>ref|XP_002319746.2| SIGMA FACTOR B family protein [Populus trichocarpa]
            gi|550325142|gb|EEE95669.2| SIGMA FACTOR B family protein
            [Populus trichocarpa]
          Length = 567

 Score =  467 bits (1201), Expect = e-129
 Identities = 269/546 (49%), Positives = 340/546 (62%), Gaps = 17/546 (3%)
 Frame = +1

Query: 223  HLQI-HCLLS---PTTSVIDFGQIDKLEARSTSSPSCVIKPLAYVGAVGPPTKTGIQMTL 390
            H Q+  C+LS   P+T+V+D  ++        S      +P  Y+G +GP  K     +L
Sbjct: 29   HTQLPQCVLSSASPSTAVLDLEKLRLPSLEPHSDSISANRPWTYIGGIGPQKKPPFGTSL 88

Query: 391  ASDKLLSDXXXXXXXXXXXXXXXXXXXXXXXXXXXKMMGMNPFVEVEN---LESSSDA-E 558
            A++ L+++                           +M     F++ E    + S++D+  
Sbjct: 89   AAETLIANDEAVIAAAAAEAVALARAAVKVAKDAAEMAKNYSFMKKETKIPIASTTDSFS 148

Query: 559  IKWL-----ERMSLIGTELGGTNHFADA-ETEYPQANFSPDQFLHTDCFSFTYSESQMTE 720
              W      ER  +IG  +       +    +YP   +        DC   T  E  + +
Sbjct: 149  SMWSLLTEKERADIIGDSVSAETRLREEYSVQYPTEEY--------DCLEPTQEELALLQ 200

Query: 721  H--AESIAVGSXXXXXXXXXXXXXXXXXXXGVTSLKSGLSGRKKR-SMQEVDYSDPXXXX 891
               +E IAV S                    V S+KSG + +KKR  +QEVD SDP    
Sbjct: 201  KQLSEGIAVRSKRQTERKARRARAAEKAAANVVSVKSGSTSKKKRVPLQEVDQSDPLRFF 260

Query: 892  XXXXXXXXXXXAAEEIRLSEGIQDLLKLERLKETLAERHGCQPTFAQWAAAAGVDRKSLR 1071
                       A EE+ LSEGIQDLLKLER++E L ER G +P+FAQWAAAAGVD+ +LR
Sbjct: 261  RGASSSSRLLSATEEVELSEGIQDLLKLERIEEELKERFGGEPSFAQWAAAAGVDQLTLR 320

Query: 1072 KRLTLGTFSKDKMIKSNIRLVISIAKNYLGTGLNIQDLVQEGCRGLVRGAEKFDASKGFK 1251
            KRL  G   KDKMIKSN+RLVISIAKNY GTG+N+QDLVQEGCRGLVRGAEKFDASKGFK
Sbjct: 321  KRLNYGILCKDKMIKSNVRLVISIAKNYQGTGMNLQDLVQEGCRGLVRGAEKFDASKGFK 380

Query: 1252 FSTYAHWWIKQSVRKFLSEHSRTIRLPYHMVEASYRVREAEKRLHRENGRHPGTEEVAVA 1431
            FSTYAHWWIKQ+VRK LS+ SRTIRLP+HMV+A+YRV+EA K+L+ ENGRHP  +EVA A
Sbjct: 381  FSTYAHWWIKQAVRKSLSDRSRTIRLPFHMVDATYRVKEARKQLYSENGRHPDDKEVAEA 440

Query: 1432 TGLSMKKLEAVMLTPKAPISLDQKIGFNESLKPTDVIAHPDAETSEDMLIKQFMRQDLNK 1611
             GLSMK+L AV+LTPKAP SLDQK+GFN  LK ++V A P+AET+ED+L+K+FM++DL K
Sbjct: 441  AGLSMKRLSAVLLTPKAPRSLDQKMGFNMDLKLSEVTADPEAETAEDLLMKEFMKKDLAK 500

Query: 1612 VLDTLNPKEKQVVRWRFGLEDGRMKTLQEIGELMGVSRERVRQIEXXXXXXXXXXXXTNN 1791
            VL +L+P+E QVVRWRFG+EDGRMKTLQEIGELMGVSRERVRQIE            T  
Sbjct: 501  VLGSLSPRENQVVRWRFGMEDGRMKTLQEIGELMGVSRERVRQIELSAFRKLKNKNRTKQ 560

Query: 1792 LRQYIV 1809
            LRQY+V
Sbjct: 561  LRQYMV 566


>ref|XP_006359117.1| PREDICTED: RNA polymerase sigma factor sigB-like [Solanum tuberosum]
          Length = 613

 Score =  466 bits (1200), Expect = e-128
 Identities = 284/587 (48%), Positives = 349/587 (59%), Gaps = 53/587 (9%)
 Frame = +1

Query: 205  KARDFVHLQIHCLLSPTTSVIDFGQ-----IDKLEA-------------RSTSSPSCVI- 327
            K+RD +HL+  C+LS T++V          I+KL+              RS  SPS    
Sbjct: 31   KSRDHIHLRTQCILSTTSAVTSTATSTVLGIEKLQLPSIEILSNSVAAERSWKSPSAATT 90

Query: 328  -----------------------KPLAYVGAVGPPTK--TGIQMTLASDKLLSDXXXXXX 432
                                   +P  Y GAVGPP +  T  + +LAS++ +        
Sbjct: 91   TVPDIQKLKLPSFEANPDSVAPDRPWTYTGAVGPPAEANTKPENSLASEEAI------VA 144

Query: 433  XXXXXXXXXXXXXXXXXXXXXKMMGMNPFVEVENLESSSDAEIKWLERMSLIGTELGGTN 612
                                  ++G N   + +N+   + +E +     S+   + G T 
Sbjct: 145  AAAAEAVALAKAALKGAQDAVMLVGYNNLNDSDNVGRGTLSEARTAPFESVHLAQPGETR 204

Query: 613  HFA------DAETEYPQANFSPDQFLHTDCFSFTYSESQMTEHAES--IAVGSXXXXXXX 768
                      +E ++  ++   +    +D    +  E ++ +   S  IAV S       
Sbjct: 205  RVGVCAELNGSEMKWTGSSLFRETLTDSDDLEPSPEELEILQSQLSNVIAVKSNRQTERK 264

Query: 769  XXXXXXXXXXXXGVTSLKSGLSGRKKR-SMQEVDYSDPXXXXXXXXXXXXXXXAAEEIRL 945
                         V ++KSG + RKKR S+Q+VDYSDP               A+EE  L
Sbjct: 265  AKRAKSVEKAAANVVTVKSGSTSRKKRASVQDVDYSDPLRYLRGTTCSSRLLTASEEQEL 324

Query: 946  SEGIQDLLKLERLKETLAERHGCQPTFAQWAAAAGVDRKSLRKRLTLGTFSKDKMIKSNI 1125
            S GIQDLLKLERL+  L ER G QPTF QWAAAAGVD+ +LRKRL  G   KDKMIKSN+
Sbjct: 325  SRGIQDLLKLERLQVELTERCGGQPTFTQWAAAAGVDQMTLRKRLNYGILCKDKMIKSNV 384

Query: 1126 RLVISIAKNYLGTGLNIQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQSVRKFLS 1305
            RLVISIAKNY G G+N+QDLVQEGCRGLVRGAEKFDA+KGFKFSTYAHWWIKQ+VRK LS
Sbjct: 385  RLVISIAKNYQGVGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLS 444

Query: 1306 EHSRTIRLPYHMVEASYRVREAEKRLHRENGRHPGTEEVAVATGLSMKKLEAVMLTPKAP 1485
            + SR IRLP+HMVEA+YRV+EA K+L  ENGRHP   EVA A GLSMK+L AVMLTPKAP
Sbjct: 445  DQSRMIRLPFHMVEATYRVKEARKQLLTENGRHPNDAEVAEAAGLSMKRLAAVMLTPKAP 504

Query: 1486 ISLDQKIGFNESLKPTDVIAHPDAETSEDMLIKQFMRQDLNKVLDTLNPKEKQVVRWRFG 1665
             SLDQKIGFNESLKP++V+A P+AETSE++L KQFMRQDL KVLDTLNP+EKQVVRWRFG
Sbjct: 505  RSLDQKIGFNESLKPSEVLADPEAETSEEILTKQFMRQDLEKVLDTLNPREKQVVRWRFG 564

Query: 1666 LEDGRMKTLQEIGELMGVSRERVRQIEXXXXXXXXXXXXTNNLRQYI 1806
            LEDGRMKTLQEIGELMGVSRER+RQIE            T  L+QYI
Sbjct: 565  LEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKFLQQYI 611


>gb|EMJ05079.1| hypothetical protein PRUPE_ppa006657mg [Prunus persica]
          Length = 401

 Score =  463 bits (1191), Expect = e-127
 Identities = 236/336 (70%), Positives = 277/336 (82%), Gaps = 1/336 (0%)
 Frame = +1

Query: 808  VTSLKSGLSGRKKR-SMQEVDYSDPXXXXXXXXXXXXXXXAAEEIRLSEGIQDLLKLERL 984
            V S+KSG + RKKR S+Q+VD+SDP               A EEI LSEGIQ+LLKLE+L
Sbjct: 66   VVSVKSGSTSRKKRASLQDVDHSDPLRYLRATTHTSRLLTANEEIELSEGIQELLKLEKL 125

Query: 985  KETLAERHGCQPTFAQWAAAAGVDRKSLRKRLTLGTFSKDKMIKSNIRLVISIAKNYLGT 1164
            +E L +R G QPT AQWAAAAGVD+K+LRKR+  G   KDKMIKSNIRLVISIAKNY G 
Sbjct: 126  QEELVQRCGGQPTIAQWAAAAGVDQKTLRKRINYGILCKDKMIKSNIRLVISIAKNYQGA 185

Query: 1165 GLNIQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQSVRKFLSEHSRTIRLPYHMV 1344
            G+N+QDLVQ+GCRGLVRGAEKFDASKGFKFSTYAHWWIKQ+VRK LS+ SRTIRLP+HMV
Sbjct: 186  GMNLQDLVQQGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMV 245

Query: 1345 EASYRVREAEKRLHRENGRHPGTEEVAVATGLSMKKLEAVMLTPKAPISLDQKIGFNESL 1524
            EA+YRVREA+K+L+  NGRHP  EEVA ATGLSMK+L AV+LTPKAP SL+QKIG N++L
Sbjct: 246  EATYRVREAKKQLYSVNGRHPNDEEVAEATGLSMKRLAAVLLTPKAPRSLEQKIGINQNL 305

Query: 1525 KPTDVIAHPDAETSEDMLIKQFMRQDLNKVLDTLNPKEKQVVRWRFGLEDGRMKTLQEIG 1704
            KP++VIA P+AET+EDML+K+FM+QDL KVLD+LN +EKQVVRWRFGLEDGRMKTLQEIG
Sbjct: 306  KPSEVIADPEAETAEDMLMKKFMKQDLEKVLDSLNAREKQVVRWRFGLEDGRMKTLQEIG 365

Query: 1705 ELMGVSRERVRQIEXXXXXXXXXXXXTNNLRQYIVT 1812
            ELMGVSRER+RQIE            T +L+QY+V+
Sbjct: 366  ELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVVS 401


>emb|CAD20831.2| sigma factor [Spinacia oleracea]
          Length = 575

 Score =  457 bits (1177), Expect = e-126
 Identities = 272/549 (49%), Positives = 333/549 (60%), Gaps = 17/549 (3%)
 Frame = +1

Query: 211  RDFVHLQIHCLLS----PT----TSVIDFGQIDKLEARSTSSPSCVIKPLAYVGAVGPPT 366
            RD V  +  C +S    PT    TS+ D  ++      S S+         ++  +G P 
Sbjct: 37   RDLVCFRPQCAVSTPPPPTAAAETSIFDVEKLRLPYVESNSNSLSAFAQSTFLSTLGSPA 96

Query: 367  KTGIQMTLASDKLLSDXXXXXXXXXXXXXXXXXXXXXXXXXXXKMMGMN--PFVEVENLE 540
            +      L + KLL +                            +M  N  P   V  LE
Sbjct: 97   EVKFDTALTA-KLLIENEEAVIAAAAAEAVALARAAAKLAKDAALMAFNSQPTKPVSKLE 155

Query: 541  SSS----DAEIKWLERMSLIGTELGGTNHFADAETEYPQANFSPDQFLHTDCFSFTYSES 708
              S     A++   E++  +    G  N   + +T    A+  P           T  E 
Sbjct: 156  GQSLHFSGAQLLENEQVGSMRNFEGSENSLREGDTVSEPADMEP-----------TIEEL 204

Query: 709  QMTEHA--ESIAVGSXXXXXXXXXXXXXXXXXXXGVTSLKSGLSGRKKR-SMQEVDYSDP 879
            Q+ E    ESI V S                    V S+K G + RKKR S+QEVDYSDP
Sbjct: 205  QLLEVELDESITVRSTRQGERKARRARAAEKVASNVVSVKVGSNSRKKRTSVQEVDYSDP 264

Query: 880  XXXXXXXXXXXXXXXAAEEIRLSEGIQDLLKLERLKETLAERHGCQPTFAQWAAAAGVDR 1059
                           ++EE  LS GIQDLLKLE+L + L  R G  P+F QWAAAAG+D+
Sbjct: 265  LRYLRGATNSSRLLTSSEETELSAGIQDLLKLEKLHDELKVRFGKSPSFVQWAAAAGIDQ 324

Query: 1060 KSLRKRLTLGTFSKDKMIKSNIRLVISIAKNYLGTGLNIQDLVQEGCRGLVRGAEKFDAS 1239
            ++LR+RL  GTF KDKMIKSN+RLVISIAKNY G+G+N+QDLVQEGCRGLVRGAEKFDAS
Sbjct: 325  RTLRRRLNHGTFCKDKMIKSNVRLVISIAKNYQGSGMNLQDLVQEGCRGLVRGAEKFDAS 384

Query: 1240 KGFKFSTYAHWWIKQSVRKFLSEHSRTIRLPYHMVEASYRVREAEKRLHRENGRHPGTEE 1419
            KGFKFSTYAHWWIKQ+VRK LS+ SRTIRLP+HMVEA+YRV+EA K+L  ENG+ P  EE
Sbjct: 385  KGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLLSENGKQPNNEE 444

Query: 1420 VAVATGLSMKKLEAVMLTPKAPISLDQKIGFNESLKPTDVIAHPDAETSEDMLIKQFMRQ 1599
            VA ATGLSMK+L AV++TPKAP SLDQKIGFN +LKP++VIA P+AET+ED+L KQFMRQ
Sbjct: 445  VAEATGLSMKRLTAVLMTPKAPRSLDQKIGFNMNLKPSEVIADPEAETAEDLLTKQFMRQ 504

Query: 1600 DLNKVLDTLNPKEKQVVRWRFGLEDGRMKTLQEIGELMGVSRERVRQIEXXXXXXXXXXX 1779
            DL KVLDTL+ +EKQV+RWRFGLEDGRMKTLQEIGELMGVSRER+RQIE           
Sbjct: 505  DLEKVLDTLSSREKQVIRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESSAFRKLQNKK 564

Query: 1780 XTNNLRQYI 1806
             T NL+QY+
Sbjct: 565  KTINLQQYM 573


>ref|XP_006417677.1| hypothetical protein EUTSA_v10007187mg [Eutrema salsugineum]
            gi|557095448|gb|ESQ36030.1| hypothetical protein
            EUTSA_v10007187mg [Eutrema salsugineum]
          Length = 579

 Score =  457 bits (1175), Expect = e-126
 Identities = 275/550 (50%), Positives = 342/550 (62%), Gaps = 20/550 (3%)
 Frame = +1

Query: 220  VHLQIHCLLSPT----TSVIDFGQIDKLEARSTSSPSCVI-KPLAYVGAVGPPTKTGIQM 384
            V  Q  C +S +    TS++D  ++ +L +  T S S +  +   Y G VGP T+     
Sbjct: 34   VFFQPQCAVSTSPPLLTSMLDVAKL-RLPSFDTDSDSRISDRQWTYTGTVGPSTEAKYLE 92

Query: 385  TLASDKLLSDXXXXXXXXXXXXXXXXXXXXXXXXXXXKMMGMNPFVEVENLESSSDAEIK 564
             LAS+ LL+                                 N +     + S++D   K
Sbjct: 93   ALASETLLTSDEAVVAAAAAEAVALARAAVKVAKDATSFR--NSYNTKVVVSSAADKRSK 150

Query: 565  W-----LERMSLIG----TELGGTNHFADAETEYPQANFSPDQFLHTDCFSFTYSESQMT 717
            W      ER  ++G    ++ G  +  + A    P    +PD   + +      SE Q  
Sbjct: 151  WDQFTEKERAGILGHLAVSDTGVVSDKSTAPAPAPAPAPAPD--CNNESSGDLKSEKQEV 208

Query: 718  EHAE-----SIAVGSXXXXXXXXXXXXXXXXXXXGVTSLKSGLSGRKKRS-MQEVDYSDP 879
            E  E     S AV S                    + S+K+G S RKKR+  QEVD++DP
Sbjct: 209  ELLEEQLSVSSAVRSTRQTERKARRAKGLEKTASSMQSVKTGSSSRKKRAPSQEVDHNDP 268

Query: 880  XXXXXXXXXXXXXXXAAEEIRLSEGIQDLLKLERLKETLAERHGCQPTFAQWAAAAGVDR 1059
                           A EE  LSEGIQDLLKLERL+  L ER G QPTFAQWA+AAGVD+
Sbjct: 269  LRYLRMTTSSSKLLTAREEQELSEGIQDLLKLERLQAELTERCGHQPTFAQWASAAGVDQ 328

Query: 1060 KSLRKRLTLGTFSKDKMIKSNIRLVISIAKNYLGTGLNIQDLVQEGCRGLVRGAEKFDAS 1239
            KSLRKR+  GT  KD+MIKSNIRLVISIAKNY G G+N+QDLVQEGCRGLVRGAEKFDA+
Sbjct: 329  KSLRKRINYGTQCKDRMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDAT 388

Query: 1240 KGFKFSTYAHWWIKQSVRKFLSEHSRTIRLPYHMVEASYRVREAEKRLHRENGRHPGTEE 1419
            KGFKFSTYAHWWIKQ+VRK LS+ SR IRLP+HMVEA+YRV+EA K+L+ E G+ P  EE
Sbjct: 389  KGFKFSTYAHWWIKQAVRKSLSDQSRMIRLPFHMVEATYRVKEARKQLYSETGKQPENEE 448

Query: 1420 VAVATGLSMKKLEAVMLTPKAPISLDQKIGFNESLKPTDVIAHPDAETSEDMLIKQFMRQ 1599
            VA ATGLSMK+L AV+L+PK P SLDQKIG N++LKP++VIA P+AETSED+LIKQFMRQ
Sbjct: 449  VAEATGLSMKRLMAVLLSPKPPRSLDQKIGINQNLKPSEVIADPEAETSEDILIKQFMRQ 508

Query: 1600 DLNKVLDTLNPKEKQVVRWRFGLEDGRMKTLQEIGELMGVSRERVRQIEXXXXXXXXXXX 1779
            DL+KVLD+L+ +EKQV+RWRFG+EDGRMKTLQEIGE MGVSRERVRQIE           
Sbjct: 509  DLDKVLDSLSTREKQVIRWRFGMEDGRMKTLQEIGETMGVSRERVRQIESSAFRKLKNKK 568

Query: 1780 XTNNLRQYIV 1809
             +N+L+QY+V
Sbjct: 569  RSNHLQQYLV 578


>ref|XP_006307126.1| hypothetical protein CARUB_v10008711mg [Capsella rubella]
            gi|482575837|gb|EOA40024.1| hypothetical protein
            CARUB_v10008711mg [Capsella rubella]
          Length = 571

 Score =  456 bits (1174), Expect = e-125
 Identities = 267/525 (50%), Positives = 329/525 (62%), Gaps = 7/525 (1%)
 Frame = +1

Query: 256  TSVIDFGQIDKLEARSTSSPSCVI-KPLAYVGAVGPPTKTGIQMTLASDKLLSDXXXXXX 432
            TS +D  ++ +L +  T S S +  +   Y G VGP T+      LAS+ LL+       
Sbjct: 50   TSTLDVAKL-RLPSFDTDSDSRISDRQWTYTGTVGPSTEAKYLEALASETLLTSDEAVVA 108

Query: 433  XXXXXXXXXXXXXXXXXXXXXKMMGMNPFVEVENLESSSDAEIKW-----LERMSLIGTE 597
                                      N    +  + S++D   KW      ER  ++G  
Sbjct: 109  AAAAEAVALARAAVKVAKDATLFKNSNNTNLL--ISSTADKRSKWDQFTEKERAGILGHL 166

Query: 598  LGGTNHFADAETEYPQANFSPDQFLHTDCFSFTYSESQMTEHAESIAVGSXXXXXXXXXX 777
                      ++  P +N      L ++       E Q    A S+AV S          
Sbjct: 167  AVSDTGIVSDKSTAPASNKESSADLISEIQEVELVEEQP---AASLAVRSTRQTERKARR 223

Query: 778  XXXXXXXXXGVTSLKSGLSGRKKRSM-QEVDYSDPXXXXXXXXXXXXXXXAAEEIRLSEG 954
                      + S+K+G S RKKR + QEVD++DP                 EE  LS G
Sbjct: 224  AKGLEKSASAIPSVKTGSSPRKKRVVAQEVDHNDPLRYLRVTTSSSKLLTVREEHELSAG 283

Query: 955  IQDLLKLERLKETLAERHGCQPTFAQWAAAAGVDRKSLRKRLTLGTFSKDKMIKSNIRLV 1134
            IQDLLKLERL+  L ER G QPTF+QWA+AAGVD+KSLRKR+  GT  KDKMIKSNIRLV
Sbjct: 284  IQDLLKLERLQAELTERCGRQPTFSQWASAAGVDQKSLRKRINYGTQCKDKMIKSNIRLV 343

Query: 1135 ISIAKNYLGTGLNIQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQSVRKFLSEHS 1314
            ISIAKNY G G+N+QDLVQEGCRGLVRGAEKFDA+KGFKFSTYAHWWIKQ+VRK LS+ S
Sbjct: 344  ISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQS 403

Query: 1315 RTIRLPYHMVEASYRVREAEKRLHRENGRHPGTEEVAVATGLSMKKLEAVMLTPKAPISL 1494
            R IRLP+HMVEA+YRV+EA K+L+ E GRHP  EEVA ATGLSMK+L AV+L+PK P SL
Sbjct: 404  RMIRLPFHMVEATYRVKEARKQLYTEKGRHPENEEVAEATGLSMKRLMAVLLSPKPPRSL 463

Query: 1495 DQKIGFNESLKPTDVIAHPDAETSEDMLIKQFMRQDLNKVLDTLNPKEKQVVRWRFGLED 1674
            DQKIG N++LKP++VIA P+AETSED+LIKQFMR+DL+KVLD+L  +EKQV+RWRFG+ED
Sbjct: 464  DQKIGMNQNLKPSEVIADPEAETSEDILIKQFMREDLDKVLDSLGTREKQVIRWRFGMED 523

Query: 1675 GRMKTLQEIGELMGVSRERVRQIEXXXXXXXXXXXXTNNLRQYIV 1809
            GRMKTLQEIGELMGVSRERVRQIE            +N+L+QY+V
Sbjct: 524  GRMKTLQEIGELMGVSRERVRQIESSAFRKLKNKKRSNHLQQYLV 568


>ref|XP_002325455.2| hypothetical protein POPTR_0019s06100g [Populus trichocarpa]
            gi|550316911|gb|EEE99836.2| hypothetical protein
            POPTR_0019s06100g [Populus trichocarpa]
          Length = 555

 Score =  453 bits (1166), Expect = e-124
 Identities = 256/535 (47%), Positives = 329/535 (61%), Gaps = 13/535 (2%)
 Frame = +1

Query: 247  SPTTSVIDFGQIDKLEARSTSSPSCVIKPLAYVGAVGPPTKTGIQMTLASDKLLSDXXXX 426
            S +T+V++  ++      S S      +P  Y+G +GPP +     +LA++ L+ +    
Sbjct: 29   STSTAVLNLEKLRLPSLESHSDSIAANRPWTYIGGIGPPKEPLFGTSLATETLIINDEAV 88

Query: 427  XXXXXXXXXXXXXXXXXXXXXXXKMM----GMNPFVEVENLESSSDAEIKWL-----ERM 579
                                   +M      +N   ++    ++      W      ER 
Sbjct: 89   IAAAAAEAVALARAAVKVAKDAAEMAKNYCSVNTETKIPIASTADSFSSMWCLLTGKERA 148

Query: 580  SLIGTELGG-TNHFADAETEYPQANFSPDQFLHTDCFSFTYSESQMTEH--AESIAVGSX 750
             +IG      T    +  T+YP           +DCF  T+ E  + E   +ESI V S 
Sbjct: 149  DIIGVSFSAETGLREECSTQYPTEE--------SDCFGPTHEELALLEKQLSESIVVRSK 200

Query: 751  XXXXXXXXXXXXXXXXXXGVTSLKSGLSGRKKR-SMQEVDYSDPXXXXXXXXXXXXXXXA 927
                                  +KSG + +KKR  +QEVD SDP               A
Sbjct: 201  RQTQRKAKRARAAEKAAANFVFMKSGSACKKKRVPVQEVDQSDPLRFFRGASTSSRLLSA 260

Query: 928  AEEIRLSEGIQDLLKLERLKETLAERHGCQPTFAQWAAAAGVDRKSLRKRLTLGTFSKDK 1107
             EE+ LSEGIQDLLKLER++E L ER G +PTFAQWAAAA VD+ +LRKRL      KDK
Sbjct: 261  TEEVELSEGIQDLLKLERIEEELKERFGGKPTFAQWAAAARVDQITLRKRLNYAILCKDK 320

Query: 1108 MIKSNIRLVISIAKNYLGTGLNIQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQS 1287
            MIKSNIRLVISIAKNY G G+N+QDLVQEGCRGLVRG EKFDASKGFKFSTYAHWWI+Q+
Sbjct: 321  MIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGVEKFDASKGFKFSTYAHWWIRQA 380

Query: 1288 VRKFLSEHSRTIRLPYHMVEASYRVREAEKRLHRENGRHPGTEEVAVATGLSMKKLEAVM 1467
            VR+ LS+ SRTIRLP+HMV+A+YRV+EA K+ + ENGRHP  +EVA ATGLSMK+L AV+
Sbjct: 381  VRRSLSDQSRTIRLPFHMVDATYRVKEARKQFYSENGRHPDDKEVAEATGLSMKRLSAVL 440

Query: 1468 LTPKAPISLDQKIGFNESLKPTDVIAHPDAETSEDMLIKQFMRQDLNKVLDTLNPKEKQV 1647
            LTPKAP SLDQK+GFN  LK ++V A P+AET+ED+L+K+FM++DL +VL++L+P+E QV
Sbjct: 441  LTPKAPRSLDQKMGFNMDLKLSEVTADPEAETAEDLLMKEFMKKDLERVLESLSPRENQV 500

Query: 1648 VRWRFGLEDGRMKTLQEIGELMGVSRERVRQIEXXXXXXXXXXXXTNNLRQYIVT 1812
            +RWRFG+EDGRMKTLQEIGELMGVSRER+RQIE            T  LRQY+V+
Sbjct: 501  IRWRFGMEDGRMKTLQEIGELMGVSRERIRQIELSAFRKLKNKNRTKQLRQYLVS 555