BLASTX nr result
ID: Zingiber24_contig00002177
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00002177
(2366 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002443890.1| hypothetical protein SORBIDRAFT_07g003870 [S... 256 3e-65
ref|NP_001147482.1| LHY protein [Zea mays] gi|195611664|gb|ACG27... 254 1e-64
gb|ADU60099.1| circadian clock associated protein 1 [Zea mays] 252 6e-64
gb|AFW61192.1| putative MYB DNA-binding domain superfamily prote... 251 1e-63
ref|NP_001131529.2| LHY protein [Zea mays] gi|195609712|gb|ACG26... 241 8e-61
ref|XP_004972798.1| PREDICTED: protein LHY-like isoform X1 [Seta... 240 2e-60
ref|NP_001061032.1| Os08g0157600 [Oryza sativa Japonica Group] g... 238 1e-59
ref|XP_006659144.1| PREDICTED: protein CCA1-like isoform X8 [Ory... 236 4e-59
gb|EEC82927.1| hypothetical protein OsI_27882 [Oryza sativa Indi... 235 8e-59
dbj|BAC99516.1| putative LHY protein [Oryza sativa Japonica Group] 231 1e-57
ref|XP_006659137.1| PREDICTED: protein CCA1-like isoform X1 [Ory... 230 2e-57
gb|ADW09013.1| LHY [Triticum aestivum] 219 4e-54
gb|AAR20887.1| circadian oscillator component [Oryza sativa Japo... 218 1e-53
dbj|BAJ92173.1| predicted protein [Hordeum vulgare subsp. vulgar... 214 1e-52
gb|AEW48245.1| circadian clock associated 1 [Hordeum vulgare sub... 213 3e-52
ref|XP_003573469.1| PREDICTED: protein LHY-like [Brachypodium di... 213 4e-52
gb|AAU20773.1| late elongated hypocotyl [Castanea sativa] 206 3e-50
ref|XP_004494878.1| PREDICTED: protein LHY-like isoform X1 [Cice... 201 2e-48
ref|XP_003528756.1| PREDICTED: protein LHY isoform X1 [Glycine m... 198 1e-47
emb|CAD12767.2| LHY protein [Phaseolus vulgaris] 196 4e-47
>ref|XP_002443890.1| hypothetical protein SORBIDRAFT_07g003870 [Sorghum bicolor]
gi|241940240|gb|EES13385.1| hypothetical protein
SORBIDRAFT_07g003870 [Sorghum bicolor]
Length = 747
Score = 256 bits (654), Expect = 3e-65
Identities = 221/724 (30%), Positives = 317/724 (43%), Gaps = 103/724 (14%)
Frame = +2
Query: 308 EQQSPREELVVKVRKPYTITKQREKWTEEEHNSFLEALKLYGRAWQRIEDHIGTKTAVQI 487
E S EE+VVKVRKPYTITKQRE+WTE EH FLEALKLYGRAWQRIE+H+GTKTAVQI
Sbjct: 29 EVNSSGEEMVVKVRKPYTITKQRERWTEAEHKRFLEALKLYGRAWQRIEEHVGTKTAVQI 88
Query: 488 RSHAQKFFTKLEKEALSKGASPGHVHDIDIXXXXXXXXXXXXXXXXTTTGSLSPSGEEAA 667
RSHAQKFFTKLEKEA++ G SPG DIDI + S +P+ +
Sbjct: 89 RSHAQKFFTKLEKEAMTNGTSPGQALDIDIPPPRPKRKPNNPYPRKSGLSSETPTKDFPN 148
Query: 668 AGSKPPNP------ICLKNDANKEKLKVKENTESGNSSVVLNIAQHGLSASIS--NKGST 823
S PN + + DA+ +K + KE +E G+ S VLN+ + SAS S NK S+
Sbjct: 149 DKSAKPNMPLSNGNVQMAGDASLQKFQRKELSEKGSCSEVLNLFRDAPSASFSSVNKSSS 208
Query: 824 S---PVLMEFLPT----VRSSKENAAVDNPVLPINTFNEATLVYQGNVLIQGSCMSSNNN 982
+ P +E T + + N+ N + ++ + ++ I C S+
Sbjct: 209 NHGAPRGVEASKTEIRDMTIMENNSLNPNMQEDVKEISDHEMERLNSIQISSKCEHSHEG 268
Query: 983 IVDVE--------GSISNYHVS--SIKQAHSVGINRSKEKNEQTLT-------SSDQPGP 1111
+D+ S+ +V + + +HS+ T T +SDQ G
Sbjct: 269 YLDLSMQQMKLKPKSVETTYVDKQTARASHSLAEKNGTASILVTATEGTHSDQTSDQVGI 328
Query: 1112 AAAVSPSMG--LKHSPXXXXXXXXXXXXXXX--FSPVVQYNNQRESCDAFLNMSSAFSNL 1279
+++P + L P F+P++Q N +++ +F+NMSS FS++
Sbjct: 329 NGSINPCIHPMLSSDPKFDSSATPQHFPHNYAAFAPMMQGNCNQDTYRSFVNMSSTFSSM 388
Query: 1280 IISTLQQIPSVHAAASLAASYCPSVEVDGHLYLNPEIQGGEPSARGMKSSPSTPSLVTAT 1459
++STL P++HAAA LAASY P+ E + + N E + R + S PS S+V AT
Sbjct: 389 LVSTLLSNPAIHAAARLAASYWPAAEGNTLIDPNQENPADDVQGRNIGSPPSMASIVAAT 448
Query: 1460 IXXXXXXXXXQGIMPWCTPHLSHVFXXXXXXXXXXXXXXMQVLPPLAVEMMQVPVAH--- 1630
+ QG++P+ TP ++ F +P + + PV +
Sbjct: 449 VAAASAWWATQGLLPFFTPPMAFPFVPAPSAAFPTVD-----VPRPSEKDRDFPVENAQK 503
Query: 1631 --QSEILKXXXXXXXXXXXXXNDASAKGENSEFSEL-----------------------N 1735
Q + +D S KGE S +EL N
Sbjct: 504 ECQEAQKQGQFEGLRVAASSVSDGSGKGEVSLHTELKISPVQNADATPTTGADTSDAFRN 563
Query: 1736 QAKANRLQC---IVASENTIPDELETDEDNKTKRF------------IGEARDRSNGVMG 1870
+ K +R C +S + D + EDN ++ R RS+G
Sbjct: 564 KKKQDRSSCGSNTPSSSDVDADNVPEKEDNANEKVKQASCSNSSAGDTNHRRFRSSGSTS 623
Query: 1871 QSWMPISEQNHTTFGASLERR-------PYDSALHTGVAQTKGGVPTKV----------- 1996
SW +SE+ F A R P + VA+ + T V
Sbjct: 624 DSWKEVSEEGRLAFDALFSREKLPQSFSPPQAEDSKEVAKEEENEVTTVAVDLNKNATSI 683
Query: 1997 -----XXXXXXXXXXXXFKHGNFKASQSVFKPYKRCSVEAKENKT-TREETGNKRICLPE 2158
H K+ ++ FKPYKRCSVEAKEN+ +E G KRI L
Sbjct: 684 DHDLDTMDEPRASFPNELSHLKLKSRRTGFKPYKRCSVEAKENRVPASDEVGTKRIRLES 743
Query: 2159 EA*T 2170
EA T
Sbjct: 744 EAST 747
>ref|NP_001147482.1| LHY protein [Zea mays] gi|195611664|gb|ACG27662.1| LHY protein [Zea
mays]
Length = 720
Score = 254 bits (649), Expect = 1e-64
Identities = 220/734 (29%), Positives = 310/734 (42%), Gaps = 113/734 (15%)
Frame = +2
Query: 308 EQQSPREELVVKVRKPYTITKQREKWTEEEHNSFLEALKLYGRAWQRIEDHIGTKTAVQI 487
E S EE VVKVRKPYTITKQRE+WTE EH FLEALKLYGRAWQRIE+H+GTKTAVQI
Sbjct: 2 EMNSSGEETVVKVRKPYTITKQRERWTEAEHKRFLEALKLYGRAWQRIEEHVGTKTAVQI 61
Query: 488 RSHAQKFFTKLEKEALSKGASPGHVHDIDIXXXXXXXXXXXXXXXXTTTGSLSPSGEEAA 667
RSHAQKFFTKLEKEA++ G SPG HDIDI + S + + E
Sbjct: 62 RSHAQKFFTKLEKEAMNNGTSPGQAHDIDIPPPRPKRKPNSPYPRKSCLSSETQTKELPN 121
Query: 668 AGSKPPN------PICLKNDANKEKLKVKENTESGNSSVVLNIAQHGLSASIS--NKGST 823
S PN + + DA+ + + KE +E G+ S VLN+ + SAS S NK S+
Sbjct: 122 DKSTKPNMPLSNGHVKMVGDASLQNFQRKELSEKGSRSEVLNLFRDAPSASFSSVNKSSS 181
Query: 824 SPVLMEFLPTVRSSKENAAVDNPVLPINTFNEAT-----------LVYQGNVLIQGSCMS 970
+ P + + + D ++ N+FN T + + I+ C
Sbjct: 182 N----HGAPRRTEASKTESRDMSIMENNSFNPNTQEDVKVISDQEMERLNGIQIRSKCEH 237
Query: 971 SNNNIVDVE--------GSISNYHV--SSIKQAHSVGINRSKEKNEQTL-------TSSD 1099
S+ +D+ S+ +V + + +H++ + T+ +SD
Sbjct: 238 SHEGYLDISTQQMKLMPKSVETTYVDEQTARASHTLAESNGTASVPVTVPEGTHPDQTSD 297
Query: 1100 QPG----------PAAAVSPSMGLKHSPXXXXXXXXXXXXXXXFSPVVQYNNQRESCDAF 1249
Q G P + P G +P F+P++Q N +++ +F
Sbjct: 298 QVGINGSMNPCIHPMVSADPKFGSSATP------QTFPHNYAAFAPMMQCNCNQDTYRSF 351
Query: 1250 LNMSSAFSNLIISTLQQIPSVHAAASLAASYCPSVEVDGHLYLNPEIQGGEPSARGMKSS 1429
NMSS FS++++STL P++HAAA LAASY P+ E + + N E R + S
Sbjct: 352 TNMSSTFSSMLVSTLLSNPAIHAAARLAASYWPAAEGNTPIDPNQENPADGVQGRNIGSP 411
Query: 1430 PSTPSLVTATIXXXXXXXXXQGIMPWCTPHLSHVFXXXXXXXXXXXXXXMQVLPPLAVEM 1609
PS S+V AT+ QG++P+ P ++ F +P + +
Sbjct: 412 PSMASIVAATVAAASAWWATQGLLPFFAPPVAFPFVPAPSAAFPTVD-----VPRPSEKD 466
Query: 1610 MQVPVAH-----QSEILKXXXXXXXXXXXXXNDASAKGENSEFSEL-------------- 1732
PV + Q + +D S KGE S +EL
Sbjct: 467 RDCPVENAQNECQEARKQVQFEGLRVAASSESDGSGKGEVSLHTELKLSPAQNADATPTT 526
Query: 1733 ---------NQAKANRLQC-------IVASENTIPDELETDE-------DNKTKRFIGEA 1843
N+ K +R C +P+E +E N +
Sbjct: 527 GAGTNDAFRNKKKQDRSSCGSNTPSSSDVDAGNVPEEDNANEKAKQASCSNSSAGDTNHR 586
Query: 1844 RDRSNGVMGQSWMPISEQNHTTFGASLERR-------PYDSALHTGVAQTKGGVPTKV-- 1996
R RSNG SW +SE+ F A R P + VA+ + T V
Sbjct: 587 RFRSNGSTSDSWKEVSEEGRLAFDALFSREKLPQSFSPPQAVDSKEVAKEEEDEVTTVAV 646
Query: 1997 ---------------XXXXXXXXXXXXFKHGNFKASQSVFKPYKRCSVEAKENKT-TREE 2128
H K+ ++ FKPYKRCSVEAKEN+ T +
Sbjct: 647 DLNKNATSIDHDDLDTMDEPRASFPNELSHLKLKSRRTGFKPYKRCSVEAKENRVPTSDM 706
Query: 2129 TGNKRICLPEEA*T 2170
G KRI L EA T
Sbjct: 707 VGTKRIRLDSEAST 720
>gb|ADU60099.1| circadian clock associated protein 1 [Zea mays]
Length = 720
Score = 252 bits (643), Expect = 6e-64
Identities = 219/734 (29%), Positives = 309/734 (42%), Gaps = 113/734 (15%)
Frame = +2
Query: 308 EQQSPREELVVKVRKPYTITKQREKWTEEEHNSFLEALKLYGRAWQRIEDHIGTKTAVQI 487
E S EE VVKVRKPYTITKQRE+WTE EH FL+ALKLYGRAWQRIE+H+GTKTAVQI
Sbjct: 2 EMNSSGEETVVKVRKPYTITKQRERWTEAEHKRFLDALKLYGRAWQRIEEHVGTKTAVQI 61
Query: 488 RSHAQKFFTKLEKEALSKGASPGHVHDIDIXXXXXXXXXXXXXXXXTTTGSLSPSGEEAA 667
RSHAQKFFTKLEKEA++ G SPG HDIDI + S + + E
Sbjct: 62 RSHAQKFFTKLEKEAMNNGTSPGQAHDIDIPPPRPKRKPNSPYPRKSCLSSETQTKELPN 121
Query: 668 AGSKPPN------PICLKNDANKEKLKVKENTESGNSSVVLNIAQHGLSASIS--NKGST 823
S PN + + DA+ + + KE +E G+ S VLN+ + SAS S NK S+
Sbjct: 122 DKSTKPNMPLSNGHVKMVGDASLQNFQRKELSEKGSRSEVLNLFRDAPSASFSSVNKSSS 181
Query: 824 SPVLMEFLPTVRSSKENAAVDNPVLPINTFNEAT-----------LVYQGNVLIQGSCMS 970
+ P + + + D ++ N+FN T + + I+ C
Sbjct: 182 N----HGAPRRTEASKTESRDMSIMENNSFNPNTQEDVKVISDQEMERLNGIQIRSKCEH 237
Query: 971 SNNNIVDVE--------GSISNYHV--SSIKQAHSVGINRSKEKNEQTL-------TSSD 1099
S+ +D+ S+ +V + + +H++ + T+ +SD
Sbjct: 238 SHEGYLDISTQQMKLMPKSVETTYVDEQTARASHTLAESNGTASVPVTVPEGTHPDQTSD 297
Query: 1100 QPG----------PAAAVSPSMGLKHSPXXXXXXXXXXXXXXXFSPVVQYNNQRESCDAF 1249
Q G P + P G +P F+P++Q N +++ +F
Sbjct: 298 QVGINGSMNPCIHPMVSADPKFGSSATP------QTFPHNYAAFAPMMQCNCNQDTYRSF 351
Query: 1250 LNMSSAFSNLIISTLQQIPSVHAAASLAASYCPSVEVDGHLYLNPEIQGGEPSARGMKSS 1429
NMSS FS++++STL P++HAAA LAASY P+ E + + N E R + S
Sbjct: 352 TNMSSTFSSMLVSTLLSNPAIHAAARLAASYWPAAEGNTPIDPNQENPADGVQGRNIGSP 411
Query: 1430 PSTPSLVTATIXXXXXXXXXQGIMPWCTPHLSHVFXXXXXXXXXXXXXXMQVLPPLAVEM 1609
PS S+V AT+ QG++P P ++ F +P + +
Sbjct: 412 PSMASIVAATVAAASAWWATQGLLPLFAPPVAFPFVPAPSAAFPTVD-----VPRPSEKD 466
Query: 1610 MQVPVAH-----QSEILKXXXXXXXXXXXXXNDASAKGENSEFSEL-------------- 1732
PV + Q + +D S KGE S +EL
Sbjct: 467 RDCPVENAQNECQEARKQVQFEGLRVAASSESDGSGKGEVSLHTELKLSPAQNADATPTT 526
Query: 1733 ---------NQAKANRLQC-------IVASENTIPDELETDE-------DNKTKRFIGEA 1843
N+ K +R C +P+E +E N +
Sbjct: 527 GAGTNDAFRNKKKQDRSSCGSNTPSSSDVDAGNVPEEDNANEKAKQASCSNSSAGDTNHR 586
Query: 1844 RDRSNGVMGQSWMPISEQNHTTFGASLERR-------PYDSALHTGVAQTKGGVPTKV-- 1996
R RSNG SW +SE+ F A R P + VA+ + T V
Sbjct: 587 RFRSNGSTSDSWKEVSEEGRLAFDALFSREKLPQSFSPPQAVDSKEVAKEEEDEVTTVAV 646
Query: 1997 ---------------XXXXXXXXXXXXFKHGNFKASQSVFKPYKRCSVEAKENKT-TREE 2128
H K+ ++ FKPYKRCSVEAKEN+ T +
Sbjct: 647 DLNKNATSIDHDDLDTMDEPRASFPNELSHLKLKSRRTGFKPYKRCSVEAKENRVPTSDM 706
Query: 2129 TGNKRICLPEEA*T 2170
G KRI L EA T
Sbjct: 707 VGTKRIRLDSEAST 720
>gb|AFW61192.1| putative MYB DNA-binding domain superfamily protein [Zea mays]
Length = 720
Score = 251 bits (641), Expect = 1e-63
Identities = 216/729 (29%), Positives = 303/729 (41%), Gaps = 108/729 (14%)
Frame = +2
Query: 308 EQQSPREELVVKVRKPYTITKQREKWTEEEHNSFLEALKLYGRAWQRIEDHIGTKTAVQI 487
E S EE VVKVRKPYTITKQRE+WTE EH FLEALKLYGRAWQRIE+H+GTKTAVQI
Sbjct: 2 EVNSSGEETVVKVRKPYTITKQRERWTEAEHKRFLEALKLYGRAWQRIEEHVGTKTAVQI 61
Query: 488 RSHAQKFFTKLEKEALSKGASPGHVHDIDIXXXXXXXXXXXXXXXXTTTGSLSPSGEEAA 667
RSHAQKFFTKLEKEA++ G SPG HDIDI + S + + E
Sbjct: 62 RSHAQKFFTKLEKEAMNNGTSPGQAHDIDIPPPRPKRKPNSPYPRKSCLSSETQTKELPN 121
Query: 668 AGSKPPN------PICLKNDANKEKLKVKENTESGNSSVVLNIAQHGLSASIS--NKGST 823
S PN + + DA+ + + KE +E G+ S VLN+ + SAS S NK S+
Sbjct: 122 DKSTKPNMPLSNGHVKMVGDASLQNFQRKELSEKGSRSEVLNLFRDAPSASFSSVNKSSS 181
Query: 824 SPVLMEFLPTVRSSKENAAVDNPVLPINTFNEAT-----------LVYQGNVLIQGSCMS 970
+ P + + + D ++ N+FN T + + I+ C
Sbjct: 182 N----HGAPRRTEASKTESRDMSIMENNSFNPNTQEDVKVISDQEMERLNGIQIRSKCEH 237
Query: 971 SNNNIVDVE--------GSISNYHV--SSIKQAHSVGINRSKEKNEQTL-------TSSD 1099
S+ +D+ S+ +V + + +H++ + T+ +SD
Sbjct: 238 SHEGYLDISTQQMKLMPKSVETTYVDEQTARASHTLAESDGTASIPVTVPEGTHPDQTSD 297
Query: 1100 QPG----------PAAAVSPSMGLKHSPXXXXXXXXXXXXXXXFSPVVQYNNQRESCDAF 1249
Q G P + P G +P F+P++Q N +++ +F
Sbjct: 298 QVGINGSMNPCIHPMVSADPKFGSSATP------QTFPHNYAAFAPMMQCNCNQDTYRSF 351
Query: 1250 LNMSSAFSNLIISTLQQIPSVHAAASLAASYCPSVEVDGHLYLNPEIQGGEPSARGMKSS 1429
NMSS FS++++STL P++HAAA LAASY P+ E + + N E R + S
Sbjct: 352 TNMSSTFSSMLVSTLLSNPAIHAAARLAASYWPAAEGNTPIDPNQENPADGVQGRNIGSP 411
Query: 1430 PSTPSLVTATIXXXXXXXXXQGIMPWCTPHLSHVFXXXXXXXXXXXXXXMQVLPPLAVEM 1609
PS S+V AT+ QG++P+ P ++ F
Sbjct: 412 PSMVSIVAATVAAASAWWATQGLLPFFAPPVAFPFVPAPSAAFPTVDVPRPSEKDRDCPA 471
Query: 1610 MQVPVAHQSEILKXXXXXXXXXXXXXNDASAKGENSEFSEL------------------- 1732
+ Q + +D S KGE S +EL
Sbjct: 472 ENAQIECQEARKQVQFEGLRIAASSESDGSGKGEVSLHTELKLSPAQNADATPTTGAGTN 531
Query: 1733 ----NQAKANRLQC-------IVASENTIPDELETDE-------DNKTKRFIGEARDRSN 1858
N+ K +R C +P+E +E N + R RSN
Sbjct: 532 DAFRNKKKQDRSSCGSNTPSSSDVDAGNVPEEDNANEKAKQASCSNSSAGDTNHRRFRSN 591
Query: 1859 GVMGQSWMPISEQNHTTFGASLERR-------PYDSALHTGVAQTKGGVPTKV------- 1996
G SW +SE+ F A R P + VA+ + T V
Sbjct: 592 GSTSDSWKEVSEEGRLAFDALFSREKLPQSFSPPQAVDSKEVAKEEEDEVTTVAVDLNKN 651
Query: 1997 ----------XXXXXXXXXXXXFKHGNFKASQSVFKPYKRCSVEAKENKTTREE-TGNKR 2143
H K+ ++ FKPYKRCSVEAKEN+ + G KR
Sbjct: 652 ATSIDHDDLDTMDEPRASFPNELSHLKLKSRRTGFKPYKRCSVEAKENRVPASDMVGTKR 711
Query: 2144 ICLPEEA*T 2170
I L EA T
Sbjct: 712 IRLDSEAST 720
>ref|NP_001131529.2| LHY protein [Zea mays] gi|195609712|gb|ACG26686.1| LHY protein [Zea
mays]
Length = 718
Score = 241 bits (616), Expect = 8e-61
Identities = 212/726 (29%), Positives = 302/726 (41%), Gaps = 105/726 (14%)
Frame = +2
Query: 308 EQQSPREELVVKVRKPYTITKQREKWTEEEHNSFLEALKLYGRAWQRIEDHIGTKTAVQI 487
E S EE V+KVRKPYTITKQRE+WTE EH FLEALKLYGRAWQRIE+H+GTKTAVQI
Sbjct: 2 EVNSSGEETVIKVRKPYTITKQRERWTEAEHKRFLEALKLYGRAWQRIEEHVGTKTAVQI 61
Query: 488 RSHAQKFFTKLEKEALSKGASPGHVHDIDIXXXXXXXXXXXXXXXXTTTGSLSPSGEEAA 667
RSHAQKFFTKLEKEA++ G SPG HDIDI + S +P+ E +
Sbjct: 62 RSHAQKFFTKLEKEAINNGTSPGQAHDIDIPPPRPKRKANSPYPRKSGLSSETPTKELPS 121
Query: 668 AGSKPPN------PICLKNDANKEKLKVKENTESGNSSVVLNIAQHGLSASIS--NKGST 823
S PN + + DA+ +K + K+ + + S VLN+ + S S S NK S+
Sbjct: 122 DKSTKPNMPLSNENVLMAGDASLQKFQRKKLSGKESCSEVLNLFRDAPSPSFSSVNKSSS 181
Query: 824 --------SPVLMEFLPTVRSSKENAAVDNPVLPINTFNEATLVYQGNVLIQGSCMSSNN 979
S + + + +S N + V I N+ + I C S+
Sbjct: 182 NHGAPIEASKTKIRDMTIMENSSLNPNMQEDVKEI---NDQEMERLNGTQISSKCEHSHE 238
Query: 980 NIVDV-------------------EGSISNYHVSSIKQAHSVGINRSKEKNEQTLTSSDQ 1102
+D+ + + +++ ++ I S+ + ++E + ++ +SDQ
Sbjct: 239 GYLDISMQQMKLKPESVETTDVDKQTARASHSLAEITGTTSIPVTATEETH--SVLTSDQ 296
Query: 1103 PGPAAAVSPSMGLKHSP----XXXXXXXXXXXXXXXFSPVVQYNNQRESCDAFLNMSSAF 1270
G +++PS+ F+P++Q N +++ + +NMSS F
Sbjct: 297 VGINGSMNPSIHPMFPADPKFDSSATPQPFPHNYAAFAPMMQCNCNQDTHRSLVNMSSTF 356
Query: 1271 SNLIISTLQQIPSVHAAASLAASYCPSVEVDGHLYLNPEIQGGEPSARGMKSSPSTPSLV 1450
S++++STL P++HAAA LAASY P+ E + + N E R + S PS S+V
Sbjct: 357 SSMLVSTLLSNPAIHAAARLAASYWPAAEGNTPIDPNQENLADGVQGRSIGSPPSMASIV 416
Query: 1451 TATIXXXXXXXXXQGIMPWCTPHLSHVFXXXXXXXXXXXXXXMQVLPPLAVEMMQVPVAH 1630
AT+ QG++P+ P ++ F
Sbjct: 417 AATVAAASAWWATQGLLPFFAPPMAFSFVPAPSAAFPTVDVPRPSEKDRDCPAENAQKEC 476
Query: 1631 QSEILKXXXXXXXXXXXXXNDASAKGENSEFSEL-----------------------NQA 1741
Q + D S KGE S +EL N+
Sbjct: 477 QEARKQGQLEGFRVTASSEYDGSGKGEVSVHTELKISPVQNADATSAAGADTTDAFMNKK 536
Query: 1742 KANRLQCIVASENTIPDELETDEDN----------KTKRF---------IGEARDRSNGV 1864
K +R C NT P + D DN K K+ R RS+G
Sbjct: 537 KQDRSSC---GSNT-PSSSDVDVDNVPEKEGNANEKAKQASCSNSSAGDTNHRRFRSSGS 592
Query: 1865 MGQSWMPISEQNHTTFGASLERRPYDSALHTGVAQTKGGVPTK-----VXXXXXXXXXXX 2029
SW +SE+ F A R + A+ V K
Sbjct: 593 TSDSWKEVSEEGRLVFHALFSREKLPQSFSPPQAEGSKEVGKKEEDEVTTVAVDLNKSTT 652
Query: 2030 XFKHG------------------NFKASQSVFKPYKRCSVEAKENKT-TREETGNKRICL 2152
H K+ Q+ FKPYKRCSVEAKEN+ +E G KRI L
Sbjct: 653 SIDHDLDTIGEPRASFPNELSPLKLKSRQTGFKPYKRCSVEAKENRVPASDEVGTKRIRL 712
Query: 2153 PEEA*T 2170
EA T
Sbjct: 713 DSEAST 718
>ref|XP_004972798.1| PREDICTED: protein LHY-like isoform X1 [Setaria italica]
gi|514793380|ref|XP_004972799.1| PREDICTED: protein
LHY-like isoform X2 [Setaria italica]
Length = 747
Score = 240 bits (612), Expect = 2e-60
Identities = 214/724 (29%), Positives = 300/724 (41%), Gaps = 106/724 (14%)
Frame = +2
Query: 308 EQQSPREELVVKVRKPYTITKQREKWTEEEHNSFLEALKLYGRAWQRIEDHIGTKTAVQI 487
E S EE VVKVRKPYTITKQRE+WTE EH FLEALKLYGRAWQRIE+H+GTKTAVQI
Sbjct: 29 EVNSSGEETVVKVRKPYTITKQRERWTEAEHKRFLEALKLYGRAWQRIEEHVGTKTAVQI 88
Query: 488 RSHAQKFFTKLEKEALSKGASPGHVHDIDIXXXXXXXXXXXXXXXXTTTGSLSPSGEEAA 667
RSHAQKFFTKLEKEA++ G SPG HDIDI S +P+ E
Sbjct: 89 RSHAQKFFTKLEKEAMNNGTSPGQAHDIDIPPPRPKRKPNSPYPRKNGLSSETPTKELPN 148
Query: 668 AGSKPPN------PICLKNDANKEKLKVKENTESGNSSVVLNIAQHGLSASIS--NKGST 823
S N + + D + +K + KE +E G+ S VLN+ + SAS S NK S+
Sbjct: 149 DKSSKSNITLSSGNVQMVGDMSLQKFQRKEVSEKGSCSEVLNLFRDAPSASFSSVNKSSS 208
Query: 824 S--------PVLMEF--LPTVRSSKENAAVDNPVLPINTFNEATLVYQGNVLIQGSCMSS 973
+ P E + T + N ++ V I+ + + + C S
Sbjct: 209 NNGVPRGVEPTKTEIRDMTTTEKNSINPTMEEDVKEIDV---PEIGRVNGIHVSSKCDYS 265
Query: 974 NNNIVDV---------EGSISNY-HVSSIKQAHSVGINRSKEKNEQTL--------TSSD 1099
N +D + S + Y + + +HS+ E+N T T D
Sbjct: 266 NEEYLDFSMQQMKLKPKSSETTYVDKQTARTSHSLA-----ERNGATSIPVTGTDGTRPD 320
Query: 1100 QPGPAAAVSPSMG------LKHSP--XXXXXXXXXXXXXXXFSPVVQYNNQRESCDAFLN 1255
Q G V+ SM L P F+P++Q N +++ +F+N
Sbjct: 321 QTGDQVGVNGSMNPCIHPMLSTDPKFDSSATPQPFPHNYAAFAPMMQCNCNQDTYRSFVN 380
Query: 1256 MSSAFSNLIISTLQQIPSVHAAASLAASYCPSVEVDGHLYLNPEIQGGEPSARGMKSSPS 1435
MSS FS++++STL P++HAAA LAASY P+ E + + E R + S PS
Sbjct: 381 MSSTFSSMLVSTLLSNPAIHAAARLAASYWPAAEGNTPVDPTQENPAEGVQGRNLGSPPS 440
Query: 1436 TPSLVTATIXXXXXXXXXQGIMPWCTPHLSHVFXXXXXXXXXXXXXXMQVLPPLAVEMMQ 1615
S+V AT+ QG++P+ TP ++ F + +
Sbjct: 441 MASIVAATVAAASAWWATQGLLPFFTPPMAFPFVPAPSAAFTTADVPRPLDKDRDSPVEN 500
Query: 1616 VPVAHQSEILKXXXXXXXXXXXXXNDASAKGENSEFSEL--------------------- 1732
Q + +D + KG+ S +EL
Sbjct: 501 AQKGCQEAQKQGQSEALRVAVSSESDGTRKGDMSLHTELKISPVQNTDAAPTTGADISDA 560
Query: 1733 --NQAKANRLQC-------IVASENTIPDELETDED--------NKTKRFIGEARDRSNG 1861
N+ K +R C +P++ + D N + + RS+G
Sbjct: 561 FRNKKKQDRSSCGSNTPSSSDVEAGNVPEKEDKANDKAKQASCSNSSAGDTNHRKFRSSG 620
Query: 1862 VMGQSWMPISEQNHTTFGASLERR-------PYDSALHTGVAQTKGGVPTKV-------- 1996
SW +SE+ F A R P + VA+ + T V
Sbjct: 621 STSDSWKEVSEEGRMAFDALFSREKLPQSFSPPQAEESKEVAKEEEDEVTTVTVDLNKNA 680
Query: 1997 --------XXXXXXXXXXXXFKHGNFKASQSVFKPYKRCSVEAKENKT-TREETGNKRIC 2149
H K+ ++ FKPYKRCSVEAKEN+ +E G KRI
Sbjct: 681 TTIDHDLDMMDEPRTSFPNELSHLKLKSRKTGFKPYKRCSVEAKENRVPASDEVGTKRIR 740
Query: 2150 LPEE 2161
L E
Sbjct: 741 LESE 744
>ref|NP_001061032.1| Os08g0157600 [Oryza sativa Japonica Group]
gi|113623001|dbj|BAF22946.1| Os08g0157600 [Oryza sativa
Japonica Group] gi|222639944|gb|EEE68076.1| hypothetical
protein OsJ_26106 [Oryza sativa Japonica Group]
Length = 719
Score = 238 bits (606), Expect = 1e-59
Identities = 223/732 (30%), Positives = 307/732 (41%), Gaps = 111/732 (15%)
Frame = +2
Query: 308 EQQSPREELVVKVRKPYTITKQREKWTEEEHNSFLEALKLYGRAWQRIEDHIGTKTAVQI 487
E S EE VVKVRKPYTITKQRE+WTE EHN FLEALKLYGRAWQRIE+H+GTKTAVQI
Sbjct: 2 EINSSGEEAVVKVRKPYTITKQRERWTEAEHNRFLEALKLYGRAWQRIEEHVGTKTAVQI 61
Query: 488 RSHAQKFFTKLEKEALSKGASPGHVHDIDIXXXXXXXXXXXXXXXXTTTGSLSPSGE--- 658
RSHAQKFFTKLEKEA++ G SPG HDIDI + S + + E
Sbjct: 62 RSHAQKFFTKLEKEAINNGTSPGQAHDIDIPPPRPKRKPNSPYPRKSCLSSETSTREVQN 121
Query: 659 -EAAAGSKPPNPIC-LKNDANKEKLKVKENTESGNSSVVLNIAQHGLSASIS--NKGSTS 826
+A + N + DA EKL+ KE +E G+ S VLN+ + SAS S NK S++
Sbjct: 122 DKATISNMTNNSTAQMAGDAALEKLQRKEISEKGSCSEVLNLFREVPSASFSSVNKSSSN 181
Query: 827 PVLMEFL-PTVRSSKENAAVDNPVLP------INTFNEATLVYQGNVLIQGSCMSSNNNI 985
L PT K+ ++ + N+ + + I S+ N
Sbjct: 182 HGASRGLEPTKTEVKDVVILERDSISNGAGKDAKDINDQEMERLNGIHISSKPDHSHENC 241
Query: 986 VDVEG--------SISNYHV--SSIKQAHS-------VGINRSKEKNEQTLTSSDQPGPA 1114
+D S+ +V S+ K +H G + + +SDQ G A
Sbjct: 242 LDTSSQQFKPKSNSVETTYVDWSAAKASHYQMDRNGVTGFQATGTEGSHPDQTSDQMGGA 301
Query: 1115 AA-----VSPSMGLKHSPXXXXXXXXXXXXXXXFSPVVQYNNQRESCDAFLNMSSAFSNL 1279
+ + P++ + F+P++Q + +++ +F NMSS FS++
Sbjct: 302 SGTMNQCIHPTLPVDPKFDGNAAAQPFPHNYAAFAPMMQCHCNQDAYRSFANMSSTFSSM 361
Query: 1280 IISTLQQIPSVHAAASLAASYCPSVEVDGHLYLNPEIQGGEPSARGMK--SSPSTPSLVT 1453
++STL P++HAAA LAASY P+ VDG+ +P + SA+G S P+ S+VT
Sbjct: 362 LVSTLLSNPAIHAAARLAASYWPT--VDGNT-PDPNQENLSESAQGSHAGSPPNMASIVT 418
Query: 1454 ATIXXXXXXXXXQGIMPWCTPHLSHVFXXXXXXXXXXXXXXMQVLPPLAVEMMQVPVAHQ 1633
AT+ QG++P P ++ F + M Q
Sbjct: 419 ATVAAASAWWATQGLLPLFPPPIAFPFVPAPSAPFSTADVQRAQEKDIDCPMDNAQKELQ 478
Query: 1634 SEILKXXXXXXXXXXXXXNDASAKGENSEFSEL-----------------------NQAK 1744
+ D S KGE S +EL N+ K
Sbjct: 479 ETRKQDNFEAMKVIVSSETDESGKGEVSLHTELKISPADKADTKPAAGAETSDVFGNKKK 538
Query: 1745 ANRLQCIVASENTIPDELETDE-----------------------DNKTKRFIGEARDRS 1855
+R C S ++E D DN +RF RS
Sbjct: 539 QDRSSC--GSNTPSSSDIEADNAPENQEKANDKAKQASCSNSSAGDNNHRRF------RS 590
Query: 1856 NGVMGQSWMPISEQNHTTFGA--SLERRPYDSA------------------------LHT 1957
+ SW +SE+ F A S ER P + L+
Sbjct: 591 SASTSDSWKEVSEEGRLAFDALFSRERLPQSFSPPQVEGSKEISKEEEDEVTTVTVDLNK 650
Query: 1958 GVAQTKGGVPTKVXXXXXXXXXXXXFKHGNFKASQSVFKPYKRCSVEAKENKT-TREETG 2134
A + T K K+ ++ FKPYKRCSVEAKEN+ +E G
Sbjct: 651 NAAIIDQELDTADEPRASFPNELSNLK---LKSRRTGFKPYKRCSVEAKENRVPASDEVG 707
Query: 2135 NKRICLPEEA*T 2170
KRI L EA T
Sbjct: 708 TKRIRLESEAST 719
>ref|XP_006659144.1| PREDICTED: protein CCA1-like isoform X8 [Oryza brachyantha]
gi|573953750|ref|XP_006659145.1| PREDICTED: protein
CCA1-like isoform X9 [Oryza brachyantha]
Length = 718
Score = 236 bits (601), Expect = 4e-59
Identities = 213/735 (28%), Positives = 305/735 (41%), Gaps = 114/735 (15%)
Frame = +2
Query: 308 EQQSPREELVVKVRKPYTITKQREKWTEEEHNSFLEALKLYGRAWQRIEDHIGTKTAVQI 487
E S EE VVKVRKPYTITKQRE+WTE EH FLEALKLYGRAWQRIE+H+GTKTAVQI
Sbjct: 2 EINSSGEEAVVKVRKPYTITKQRERWTEAEHKRFLEALKLYGRAWQRIEEHVGTKTAVQI 61
Query: 488 RSHAQKFFTKLEKEALSKGASPGHVHDIDIXXXXXXXXXXXXXXXXTTTGSLS-----PS 652
RSHAQKFFTKLEKEA++ G SPG HDIDI ++ + P+
Sbjct: 62 RSHAQKFFTKLEKEAINNGTSPGQAHDIDIPPPRPKRKPNSPYPRKSSLSCETSIREVPN 121
Query: 653 GEEAAAGSKPPNPICLKNDANKEKLKVKENTESGNSSVVLNIAQ-HGLSASISNKGSTS- 826
+ + + + + DA EKL+ KE +E G+ S V+N+ + S S NKGS++
Sbjct: 122 DKATKSNLRSNSTSQMAGDAALEKLQRKEISEKGSCSEVINLFEIPSASFSSVNKGSSNH 181
Query: 827 -------PVLMEFLPTV---RSSKENAAVDNPVLPINTFNEATLVYQGNVLIQGSCMSSN 976
P E V R S N V N N+ + + I S+
Sbjct: 182 DASRGMEPTKTEIKDVVILERDSIHNGVVKN----AKDINDQEMERLNEMHISSKSDHSH 237
Query: 977 NNIVDVEGSISNYHVSSIKQAHS-----------------VGINRSKEKNEQTLTSSDQP 1105
N +D S +S++ ++ GI + + +SDQ
Sbjct: 238 ENCLDASKQQSKPKPNSVEATYADWSARRDSHYQMDRNGVTGIPATGTEGSHPDQTSDQM 297
Query: 1106 GPAA-----AVSPSMGLKHSPXXXXXXXXXXXXXXXFSPVVQYNNQRESCDAFLNMSSAF 1270
G A+ + P++ + F+P++Q + +++ +F+NMSS F
Sbjct: 298 GGASGTMNQCIHPTLPVDPKFDRSDTAQPFPHNYTAFAPIMQCHCDQDAYRSFVNMSSTF 357
Query: 1271 SNLIISTLQQIPSVHAAASLAASYCPSVEVDGHLYLNPEIQGGEPSARGMK--SSPSTPS 1444
S++++STL P++HAAA LAASY P+++ + +P + SA+G S P+ S
Sbjct: 358 SSMLVSTLLSNPAIHAAARLAASYWPAIDSNSP---DPNQENISESAQGSHAGSPPNMAS 414
Query: 1445 LVTATIXXXXXXXXXQGIMPWCTPHLSHVFXXXXXXXXXXXXXXMQVLPPLAV------- 1603
+V ATI QG++P P ++ F +Q P +
Sbjct: 415 IVAATIAAASAWWATQGLLPLFPPPIA--FPFVPAPSAPFPTADVQRAPEKDIDCPIDNA 472
Query: 1604 --EMMQVPVAHQSEILKXXXXXXXXXXXXXNDASAKGENSEFSEL--------------- 1732
E+ + +SE +K +D S +GE +EL
Sbjct: 473 QKELQETRKQDKSEAMK-------VIVSSESDESGQGEVLLHTELKISPADKDDTKTATG 525
Query: 1733 --------NQAKANRLQCIVASENTIPDELETDE-----------------DNKTKRFIG 1837
N+ K +R C S ++E D N +
Sbjct: 526 ANTSEVFGNKKKQDRSSC--GSNTPSSSDIEADNAPEKQEKANDKAKQASCSNSSAGDTN 583
Query: 1838 EARDRSNGVMGQSWMPISEQNHTTFGASLERRPYDSALHTGVAQ-----TKGGVPTKVXX 2002
R RS+G SW +SE+ F A R + A+ TK
Sbjct: 584 HRRFRSSGSTSDSWKEVSEEGRLAFDALFSRERLPQSFSPPQAEGSKEVTKEDEDEVTTV 643
Query: 2003 XXXXXXXXXXFKHG------------------NFKASQSVFKPYKRCSVEAKENKT-TRE 2125
H K+ ++ FKPYKRCSVEAKEN+ +
Sbjct: 644 TVDLNKNVTIIDHELDTTDEPRASFPNELSNLKLKSRRTGFKPYKRCSVEAKENRVPASD 703
Query: 2126 ETGNKRICLPEEA*T 2170
E G KRI L E T
Sbjct: 704 EVGTKRIRLESETST 718
>gb|EEC82927.1| hypothetical protein OsI_27882 [Oryza sativa Indica Group]
Length = 719
Score = 235 bits (599), Expect = 8e-59
Identities = 221/729 (30%), Positives = 303/729 (41%), Gaps = 108/729 (14%)
Frame = +2
Query: 308 EQQSPREELVVKVRKPYTITKQREKWTEEEHNSFLEALKLYGRAWQRIEDHIGTKTAVQI 487
E S EE VVKVRKPYTITKQRE+WTE EHN FLEALKLYGRAWQRIE+H+GTKTAVQI
Sbjct: 2 EINSSGEEAVVKVRKPYTITKQRERWTEAEHNRFLEALKLYGRAWQRIEEHVGTKTAVQI 61
Query: 488 RSHAQKFFTKLEKEALSKGASPGHVHDIDIXXXXXXXXXXXXXXXXTTTGSLSPSGE--- 658
RSHAQKFFTKLEKEA++ G SPG HDIDI + S + + E
Sbjct: 62 RSHAQKFFTKLEKEAINNGTSPGQAHDIDIPPPRPKRKPNSPYPRKSCLSSETSTREVQN 121
Query: 659 -EAAAGSKPPNPIC-LKNDANKEKLKVKENTESGNSSVVLNIAQHGLSASIS--NKGSTS 826
+A + N + DA EKL+ KE +E G+ S VLN+ + SAS S NK S++
Sbjct: 122 DKATISNMTNNSTAQMAGDAALEKLQRKEISEKGSCSEVLNLFREVPSASFSSVNKSSSN 181
Query: 827 PVLMEFL-PTVRSSKENAAVDNPVLP------INTFNEATLVYQGNVLIQGSCMSSNNNI 985
L PT K+ ++ + N+ + + I S+ N
Sbjct: 182 HGASRGLEPTKTEVKDVVILERDSISNGAGKDAKDINDQEMERLNGIHISSKPDHSHENC 241
Query: 986 VDVEG--------SISNYHV--SSIKQAHS-------VGINRSKEKNEQTLTSSDQPGPA 1114
+D S+ +V S+ K +H G + + +SDQ G A
Sbjct: 242 LDTSSQQFKPKSNSVETTYVDWSAAKASHYQMDRNGVTGFQATGTEGSHPDQTSDQMGGA 301
Query: 1115 AA-----VSPSMGLKHSPXXXXXXXXXXXXXXXFSPVVQYNNQRESCDAFLNMSSAFSNL 1279
+ + P++ + F+P++Q + +++ +F NMSS FS++
Sbjct: 302 SGTMNQCIHPTLPVDPKFDGNAAAQPFPHNYAAFAPMMQCHCNQDAYRSFANMSSTFSSM 361
Query: 1280 IISTLQQIPSVHAAASLAASYCPSVEVDGHLYLNPEIQGGEPSARGMK--SSPSTPSLVT 1453
++STL P++HAAA LAASY P+ VDG+ +P + SA+G S P+ S+V
Sbjct: 362 LVSTLLSNPAIHAAARLAASYWPT--VDGNT-PDPNQENLSESAQGSHAGSPPNMASIVA 418
Query: 1454 ATIXXXXXXXXXQGIMPWCTPHLSHVFXXXXXXXXXXXXXXMQVLPPLAVEMMQVPVAHQ 1633
AT+ QG++P P ++ F + M Q
Sbjct: 419 ATVAAASAWWATQGLLPLFPPPIAFPFVPAPSAPFSTADVQRAQEKDIDCPMDNAQKELQ 478
Query: 1634 SEILKXXXXXXXXXXXXXNDASAKGENSEFSEL-----------------------NQAK 1744
+ D S KGE S +EL N+ K
Sbjct: 479 ETRKQDNSEAMKVIVSSETDESGKGEVSLHTELKISPADKADTKPAAGAETSDVFGNKKK 538
Query: 1745 ANRLQCIVASENTIPDELETDE-----------------------DNKTKRFIGEARDRS 1855
+R C S ++E D DN +RF RS
Sbjct: 539 QDRSSC--GSNTPSSSDIEADNAPENQEKANDKAKQASCSNSSAGDNNHRRF------RS 590
Query: 1856 NGVMGQSWMPISEQNHTTFGA--SLERRPY------------------DSALHTGVAQTK 1975
+ SW +SE+ F A S ER P D V K
Sbjct: 591 SASTSDSWKEVSEEGRLAFDALFSRERLPQSFSPPQVEGSKEISKEEEDEVTTVTVDLNK 650
Query: 1976 GGV---PTKVXXXXXXXXXXXXFKHGNFKASQSVFKPYKRCSVEAKENKT-TREETGNKR 2143
+ K+ ++ FKPYKRCSVEAKEN+ +E G KR
Sbjct: 651 NATIIDQELDTADEPRASFPNELSNLKLKSRRTGFKPYKRCSVEAKENRVPASDEVGTKR 710
Query: 2144 ICLPEEA*T 2170
I L EA T
Sbjct: 711 IRLESEAST 719
>dbj|BAC99516.1| putative LHY protein [Oryza sativa Japonica Group]
Length = 725
Score = 231 bits (589), Expect = 1e-57
Identities = 222/738 (30%), Positives = 306/738 (41%), Gaps = 117/738 (15%)
Frame = +2
Query: 308 EQQSPREELVVKVRKPYTITKQREKWTEEEHNSFLEALKLYGRAWQRIEDHIGTKTAVQI 487
E S EE VVKVRKPYTITKQRE+WTE EHN FLEALKLYGRAWQRIE+H+GTKTAVQI
Sbjct: 2 EINSSGEEAVVKVRKPYTITKQRERWTEAEHNRFLEALKLYGRAWQRIEEHVGTKTAVQI 61
Query: 488 RSHAQKFFTKLEKEALSKGASPGHVHDIDI----XXXXXXXXXXXXXXXXTTTGSLSPSG 655
RSHAQKFFTKLEKEA++ G SPG HDIDI + T +
Sbjct: 62 RSHAQKFFTKLEKEAINNGTSPGQAHDIDIPPPRPKRKPNSPYPRKSCLSSETSTREVQN 121
Query: 656 EEAAAGSKPPNPIC-LKNDANKE------KLKVKENTESGNSSVVLNIAQHGLSASIS-- 808
++A + N + DA E KL+ KE +E G+ S VLN+ + SAS S
Sbjct: 122 DKATISNMTNNSTAQMAGDAALEKLTYIQKLQRKEISEKGSCSEVLNLFREVPSASFSSV 181
Query: 809 NKGSTSPVLMEFL-PTVRSSKENAAVDNPVL------PINTFNEATLVYQGNVLIQGSCM 967
NK S++ L PT K+ ++ + N+ + + I
Sbjct: 182 NKSSSNHGASRGLEPTKTEVKDVVILERDSISNGAGKDAKDINDQEMERLNGIHISSKPD 241
Query: 968 SSNNNIVDV--------EGSISNYHV--SSIKQAH-------SVGINRSKEKNEQTLTSS 1096
S+ N +D S+ +V S+ K +H G + + +S
Sbjct: 242 HSHENCLDTSSQQFKPKSNSVETTYVDWSAAKASHYQMDRNGVTGFQATGTEGSHPDQTS 301
Query: 1097 DQPGPAA-----AVSPSMGLKHSPXXXXXXXXXXXXXXXFSPVVQYNNQRESCDAFLNMS 1261
DQ G A+ + P++ + F+P++Q + +++ +F NMS
Sbjct: 302 DQMGGASGTMNQCIHPTLPVDPKFDGNAAAQPFPHNYAAFAPMMQCHCNQDAYRSFANMS 361
Query: 1262 SAFSNLIISTLQQIPSVHAAASLAASYCPSVEVDGHLYLNPEIQGGEPSARGMK--SSPS 1435
S FS++++STL P++HAAA LAASY P+ VDG+ +P + SA+G S P+
Sbjct: 362 STFSSMLVSTLLSNPAIHAAARLAASYWPT--VDGNT-PDPNQENLSESAQGSHAGSPPN 418
Query: 1436 TPSLVTATIXXXXXXXXXQGIMPWCTPHLSHVFXXXXXXXXXXXXXXMQVLPPLAVEMMQ 1615
S+VTAT+ QG++P P ++ F + M
Sbjct: 419 MASIVTATVAAASAWWATQGLLPLFPPPIAFPFVPAPSAPFSTADVQRAQEKDIDCPMDN 478
Query: 1616 VPVAHQSEILKXXXXXXXXXXXXXNDASAKGENSEFSEL--------------------- 1732
Q + D S KGE S +EL
Sbjct: 479 AQKELQETRKQDNFEAMKVIVSSETDESGKGEVSLHTELKISPADKADTKPAAGAETSDV 538
Query: 1733 --NQAKANRLQCIVASENTIPDELETDE-----------------------DNKTKRFIG 1837
N+ K +R C S ++E D DN +RF
Sbjct: 539 FGNKKKQDRSSC--GSNTPSSSDIEADNAPENQEKANDKAKQASCSNSSAGDNNHRRF-- 594
Query: 1838 EARDRSNGVMGQSWMPISEQNHTTFGA--SLERRPYDSA--------------------- 1948
RS+ SW +SE+ F A S ER P +
Sbjct: 595 ----RSSASTSDSWKEVSEEGRLAFDALFSRERLPQSFSPPQVEGSKEISKEEEDEVTTV 650
Query: 1949 ---LHTGVAQTKGGVPTKVXXXXXXXXXXXXFKHGNFKASQSVFKPYKRCSVEAKENKT- 2116
L+ A + T K K+ ++ FKPYKRCSVEAKEN+
Sbjct: 651 TVDLNKNAAIIDQELDTADEPRASFPNELSNLK---LKSRRTGFKPYKRCSVEAKENRVP 707
Query: 2117 TREETGNKRICLPEEA*T 2170
+E G KRI L EA T
Sbjct: 708 ASDEVGTKRIRLESEAST 725
>ref|XP_006659137.1| PREDICTED: protein CCA1-like isoform X1 [Oryza brachyantha]
gi|573953736|ref|XP_006659138.1| PREDICTED: protein
CCA1-like isoform X2 [Oryza brachyantha]
gi|573953738|ref|XP_006659139.1| PREDICTED: protein
CCA1-like isoform X3 [Oryza brachyantha]
gi|573953740|ref|XP_006659140.1| PREDICTED: protein
CCA1-like isoform X4 [Oryza brachyantha]
gi|573953742|ref|XP_006659141.1| PREDICTED: protein
CCA1-like isoform X5 [Oryza brachyantha]
gi|573953744|ref|XP_006659142.1| PREDICTED: protein
CCA1-like isoform X6 [Oryza brachyantha]
gi|573953746|ref|XP_006659143.1| PREDICTED: protein
CCA1-like isoform X7 [Oryza brachyantha]
Length = 724
Score = 230 bits (586), Expect = 2e-57
Identities = 213/741 (28%), Positives = 304/741 (41%), Gaps = 120/741 (16%)
Frame = +2
Query: 308 EQQSPREELVVKVRKPYTITKQREKWTEEEHNSFLEALKLYGRAWQRIEDHIGTKTAVQI 487
E S EE VVKVRKPYTITKQRE+WTE EH FLEALKLYGRAWQRIE+H+GTKTAVQI
Sbjct: 2 EINSSGEEAVVKVRKPYTITKQRERWTEAEHKRFLEALKLYGRAWQRIEEHVGTKTAVQI 61
Query: 488 RSHAQKFFTKLEKEALSKGASPGHVHDIDIXXXXXXXXXXXXXXXXTT-----------T 634
RSHAQKFFTKLEKEA++ G SPG HDIDI ++
Sbjct: 62 RSHAQKFFTKLEKEAINNGTSPGQAHDIDIPPPRPKRKPNSPYPRKSSLSCETSIREVPN 121
Query: 635 GSLSPSGEEAAAGSKPPNPICLKNDANKEKLKVKENTESGNSSVVLNIAQ-HGLSASISN 811
+ S + + S+ L+ A +KL+ KE +E G+ S V+N+ + S S N
Sbjct: 122 DKATKSNLRSNSTSQMAGDAALEKLACIQKLQRKEISEKGSCSEVINLFEIPSASFSSVN 181
Query: 812 KGSTS--------PVLMEFLPTV---RSSKENAAVDNPVLPINTFNEATLVYQGNVLIQG 958
KGS++ P E V R S N V N N+ + + I
Sbjct: 182 KGSSNHDASRGMEPTKTEIKDVVILERDSIHNGVVKN----AKDINDQEMERLNEMHISS 237
Query: 959 SCMSSNNNIVDVEGSISNYHVSSIKQAHS-----------------VGINRSKEKNEQTL 1087
S+ N +D S +S++ ++ GI + +
Sbjct: 238 KSDHSHENCLDASKQQSKPKPNSVEATYADWSARRDSHYQMDRNGVTGIPATGTEGSHPD 297
Query: 1088 TSSDQPGPAA-----AVSPSMGLKHSPXXXXXXXXXXXXXXXFSPVVQYNNQRESCDAFL 1252
+SDQ G A+ + P++ + F+P++Q + +++ +F+
Sbjct: 298 QTSDQMGGASGTMNQCIHPTLPVDPKFDRSDTAQPFPHNYTAFAPIMQCHCDQDAYRSFV 357
Query: 1253 NMSSAFSNLIISTLQQIPSVHAAASLAASYCPSVEVDGHLYLNPEIQGGEPSARGMK--S 1426
NMSS FS++++STL P++HAAA LAASY P+++ + +P + SA+G S
Sbjct: 358 NMSSTFSSMLVSTLLSNPAIHAAARLAASYWPAIDSNSP---DPNQENISESAQGSHAGS 414
Query: 1427 SPSTPSLVTATIXXXXXXXXXQGIMPWCTPHLSHVFXXXXXXXXXXXXXXMQVLPPLAV- 1603
P+ S+V ATI QG++P P ++ F +Q P +
Sbjct: 415 PPNMASIVAATIAAASAWWATQGLLPLFPPPIA--FPFVPAPSAPFPTADVQRAPEKDID 472
Query: 1604 --------EMMQVPVAHQSEILKXXXXXXXXXXXXXNDASAKGENSEFSEL--------- 1732
E+ + +SE +K +D S +GE +EL
Sbjct: 473 CPIDNAQKELQETRKQDKSEAMK-------VIVSSESDESGQGEVLLHTELKISPADKDD 525
Query: 1733 --------------NQAKANRLQCIVASENTIPDELETDE-----------------DNK 1819
N+ K +R C S ++E D N
Sbjct: 526 TKTATGANTSEVFGNKKKQDRSSC--GSNTPSSSDIEADNAPEKQEKANDKAKQASCSNS 583
Query: 1820 TKRFIGEARDRSNGVMGQSWMPISEQNHTTFGASLERRPYDSALHTGVAQ-----TKGGV 1984
+ R RS+G SW +SE+ F A R + A+ TK
Sbjct: 584 SAGDTNHRRFRSSGSTSDSWKEVSEEGRLAFDALFSRERLPQSFSPPQAEGSKEVTKEDE 643
Query: 1985 PTKVXXXXXXXXXXXXFKHG------------------NFKASQSVFKPYKRCSVEAKEN 2110
H K+ ++ FKPYKRCSVEAKEN
Sbjct: 644 DEVTTVTVDLNKNVTIIDHELDTTDEPRASFPNELSNLKLKSRRTGFKPYKRCSVEAKEN 703
Query: 2111 KT-TREETGNKRICLPEEA*T 2170
+ +E G KRI L E T
Sbjct: 704 RVPASDEVGTKRIRLESETST 724
>gb|ADW09013.1| LHY [Triticum aestivum]
Length = 648
Score = 219 bits (558), Expect = 4e-54
Identities = 155/451 (34%), Positives = 223/451 (49%), Gaps = 42/451 (9%)
Frame = +2
Query: 308 EQQSPREELVVKVRKPYTITKQREKWTEEEHNSFLEALKLYGRAWQRIEDHIGTKTAVQI 487
E S EE V+KVRKPYTITKQRE+WTE EH FLEALKLYGRAWQRIE+H+GTKTAVQI
Sbjct: 2 EINSSGEETVIKVRKPYTITKQRERWTEAEHKRFLEALKLYGRAWQRIEEHVGTKTAVQI 61
Query: 488 RSHAQKFFTKLEKEALSKGASPGHVHDIDIXXXXXXXXXXXXXXXXTTTGSLSPSGEEAA 667
RSHAQKFFTKLEKEA++ G SPG HDIDI S +P+ E
Sbjct: 62 RSHAQKFFTKLEKEAINNGTSPGQAHDIDIPPPRPKRKPNCPYPRKGCLSSETPTRE--- 118
Query: 668 AGSKPPNPICLKNDANK------------EKLKVKENTESGNSSVVLNIAQHGLSASISN 811
P + + L N + +KL+ KE +E+G+ S V+NI + SAS S+
Sbjct: 119 ---VPKSSVSLSNSNAEMGSNGTLQLTCIQKLQRKELSENGSCSEVINIFREAPSASFSS 175
Query: 812 KGSTSP---VLMEFLPTVRSSKENAAVDNPVLPINT------FNEATLVYQGNVLIQGSC 964
+S V PT +K+ A ++ I+ N+ + V I +
Sbjct: 176 SNKSSSNHGVSGGIEPTKTENKDIATMERKSTSIDVGKDVKDINDQEMERNNRVHISSNY 235
Query: 965 MSSNNNIVD------------VEGSISNYHVSS--IKQAHSVGINRSKE---KNEQTLTS 1093
S+ + +D E + + H +S + Q + G + + + +
Sbjct: 236 DRSHEDCLDNSMKHMQLKPNTAETTYTGQHAASAPLYQMNKTGATGAPDPGTEGSHPDQT 295
Query: 1094 SDQPGPA----AAVSPSMGLKHSPXXXXXXXXXXXXXXXFSPVVQYNNQRESCDAFLNMS 1261
SD+ G A + P++ + F+P +Q + +++ + LNMS
Sbjct: 296 SDRVGGANGSMDCIHPTLPVDPKIGSSSTAQSFPHNYAGFAPTMQCHCNQDAYRSSLNMS 355
Query: 1262 SAFSNLIISTLQQIPSVHAAASLAASYCPSVEVDGHLYLNPEIQGGEPSARGMKSSPSTP 1441
S FSN+++STL P+VHAAA LAASY P+ + + + N E+ R + S PS
Sbjct: 356 STFSNMLVSTLLSNPTVHAAARLAASYWPAADSNIPVGPNQEVFAENAQGRHIGSPPSMA 415
Query: 1442 SLVTATIXXXXXXXXXQGIMPWCTPHLSHVF 1534
S+V AT+ QG++P P ++ F
Sbjct: 416 SVVAATVAAASAWWATQGLLPLFAPPMAFPF 446
>gb|AAR20887.1| circadian oscillator component [Oryza sativa Japonica Group]
Length = 603
Score = 218 bits (555), Expect = 1e-53
Identities = 161/447 (36%), Positives = 227/447 (50%), Gaps = 38/447 (8%)
Frame = +2
Query: 308 EQQSPREELVVKVRKPYTITKQREKWTEEEHNSFLEALKLYGRAWQRIEDHIGTKTAVQI 487
E S EE VVKVRKPYTITKQRE+WTE EHN FLEALKLYGRAWQRI++H+GTKTAVQI
Sbjct: 2 EINSSGEEAVVKVRKPYTITKQRERWTEAEHNRFLEALKLYGRAWQRIKEHVGTKTAVQI 61
Query: 488 RSHAQKFFTKLEKEALSKGASPGHVHDIDIXXXXXXXXXXXXXXXXTTTGSLSPSGE--- 658
RSHAQKFFTKLEKEA++ G SPG HDIDI + S + + E
Sbjct: 62 RSHAQKFFTKLEKEAINNGTSPGQAHDIDIPPPRPKRKPNSPYPRKSCLSSETSTREVQN 121
Query: 659 -EAAAGSKPPNPIC-LKNDANKEKLKVKENTESGNSSVVLNIAQHGLSASIS--NKGSTS 826
+A + N + DA EKL+ KE +E G+ S VLN+ + SAS S NK S++
Sbjct: 122 DKATISNMTNNSTAQMAGDAALEKLQRKEISEKGSCSEVLNLFREVPSASFSSVNKSSSN 181
Query: 827 PVLMEFL-PTVRSSKENAAVDNPVLP------INTFNEATLVYQGNVLIQGSCMSSNNNI 985
L PT K+ ++ + N+ + + I S+ N
Sbjct: 182 HGASRGLEPTKTEVKDVVILERDSISNGAGKDAKDINDQEMERLNGIHISSKPDHSHENC 241
Query: 986 VDVEG--------SISNYHV--SSIKQAHS-------VGINRSKEKNEQTLTSSDQPGPA 1114
+D S+ +V S+ K +H G + + +SDQ G A
Sbjct: 242 LDTSSQQFKPKSNSVETTYVDWSAAKASHYQMDRNGVTGFQATGTEGSHPDQTSDQMGGA 301
Query: 1115 AA-----VSPSMGLKHSPXXXXXXXXXXXXXXXFSPVVQYNNQRESCDAFLNMSSAFSNL 1279
+ + P++ + F+P++Q + +++ +F NMSS FS++
Sbjct: 302 SGTMNQCIHPTLPVDPKFDGNAAAQPFPHNYAAFAPMMQCHCNQDAYRSFANMSSTFSSM 361
Query: 1280 IISTLQQIPSVHAAASLAASYCPSVEVDGHLYLNPEIQGGEPSARGMK--SSPSTPSLVT 1453
++STL P++HAAA LAASY P+ VDG+ +P + SA+G S P+ S+VT
Sbjct: 362 LVSTLLSNPAIHAAARLAASYWPT--VDGNT-PDPNQENLSESAQGSHAGSPPNMASIVT 418
Query: 1454 ATIXXXXXXXXXQGIMPWCTPHLSHVF 1534
AT+ QG++P P ++ F
Sbjct: 419 ATVAAASAWWATQGLLPLFPPPIAFPF 445
>dbj|BAJ92173.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|364285653|gb|AEW48244.1| circadian clock associated 1
[Hordeum vulgare subsp. vulgare]
gi|364285657|gb|AEW48246.1| circadian clock associated 1
[Hordeum vulgare subsp. vulgare]
gi|397911976|gb|AFO69281.1| circadian clock associated 1
[Hordeum vulgare]
Length = 717
Score = 214 bits (546), Expect = 1e-52
Identities = 154/451 (34%), Positives = 221/451 (49%), Gaps = 42/451 (9%)
Frame = +2
Query: 308 EQQSPREELVVKVRKPYTITKQREKWTEEEHNSFLEALKLYGRAWQRIEDHIGTKTAVQI 487
E S EE V+KVRKPYTITKQRE+WTE EH FLEALKLYGRAWQRIE+H+GTKTAVQI
Sbjct: 2 EINSSGEETVIKVRKPYTITKQRERWTEAEHKRFLEALKLYGRAWQRIEEHVGTKTAVQI 61
Query: 488 RSHAQKFFTKLEKEALSKGASPGHVHDIDIXXXXXXXXXXXXXXXXTTTGSLSPSGEEAA 667
RSHAQKFFTKLEKEA++ G SPG HDIDI S +P+ E
Sbjct: 62 RSHAQKFFTKLEKEAINNGTSPGQAHDIDIPPPRPKRKPNCPYPRKGCLSSETPTRE--- 118
Query: 668 AGSKPPNPICLKND------------ANKEKLKVKENTESGNSSVVLNIAQHGLSASISN 811
P + + L N + +KL+ KE + +G+ S V+NI + SAS S+
Sbjct: 119 ---VPKSSVSLSNSNSQMESNGTLQVTSTQKLQRKELSGNGSCSEVINIFREAPSASFSS 175
Query: 812 KGSTSP---VLMEFLPTVRSSKENAAVDNPVLPINT------FNEATLVYQGNVLIQGSC 964
+S V PT K+ AA++ ++ N+ + V I
Sbjct: 176 SNKSSSNHGVSGGIEPTKTEIKDMAAMERKSTSVDVAKDVKDINDQEMERNNRVHISSKY 235
Query: 965 MSSNNNIVD------------VEGSISNYHVSS--IKQAHSVGINRSKE---KNEQTLTS 1093
S+ + +D VE + + HV+S + Q + G + + + +
Sbjct: 236 DRSHEDCLDSSMKHMQLKPNTVETTYTGQHVASAPLYQMNKTGATGTPDPGTEGSHPDQT 295
Query: 1094 SDQPGPA----AAVSPSMGLKHSPXXXXXXXXXXXXXXXFSPVVQYNNQRESCDAFLNMS 1261
+DQ G A + P++ + F+P +Q +++ + ++MS
Sbjct: 296 NDQVGGANGSMDCIHPTLPVDLKFGSSSTAQPFPHNYSGFAPTMQCQCNQDAYRSSVDMS 355
Query: 1262 SAFSNLIISTLQQIPSVHAAASLAASYCPSVEVDGHLYLNPEIQGGEPSARGMKSSPSTP 1441
S FSN+++STL P+VHAAA LAASY P+ + + + N I R + S PS
Sbjct: 356 STFSNMLVSTLLSNPTVHAAARLAASYWPAADSNIPVDPNQGIFAQNAQGRHIVSPPSMA 415
Query: 1442 SLVTATIXXXXXXXXXQGIMPWCTPHLSHVF 1534
S+V AT+ QG++P P ++ F
Sbjct: 416 SVVAATVAAASAWWATQGLLPLFAPPMAFPF 446
>gb|AEW48245.1| circadian clock associated 1 [Hordeum vulgare subsp. vulgare]
Length = 717
Score = 213 bits (542), Expect = 3e-52
Identities = 153/451 (33%), Positives = 220/451 (48%), Gaps = 42/451 (9%)
Frame = +2
Query: 308 EQQSPREELVVKVRKPYTITKQREKWTEEEHNSFLEALKLYGRAWQRIEDHIGTKTAVQI 487
E S EE V+KVRKPYTITKQRE+WTE EH FLEALKLYGRAWQRIE+H+GTKTAVQI
Sbjct: 2 EINSSGEETVIKVRKPYTITKQRERWTEAEHKRFLEALKLYGRAWQRIEEHVGTKTAVQI 61
Query: 488 RSHAQKFFTKLEKEALSKGASPGHVHDIDIXXXXXXXXXXXXXXXXTTTGSLSPSGEEAA 667
RSHAQKFFTKLEKEA++ G SPG HDIDI S +P+ E
Sbjct: 62 RSHAQKFFTKLEKEAINNGTSPGQAHDIDIPPPRPKRKPNCPYPRKGCLSSETPTRE--- 118
Query: 668 AGSKPPNPICLKND------------ANKEKLKVKENTESGNSSVVLNIAQHGLSASISN 811
P + + L N + +KL+ KE + +G+ S V+NI + SAS S+
Sbjct: 119 ---VPKSSVSLSNSNSQMESNGTLQVTSTQKLQRKELSGNGSCSEVINIFREAPSASFSS 175
Query: 812 KGSTSP---VLMEFLPTVRSSKENAAVDNPVLPINT------FNEATLVYQGNVLIQGSC 964
+S V PT K+ AA++ ++ N+ + V I
Sbjct: 176 SNKSSSNHGVSGGIEPTKTEIKDMAAMERKSTSVDVAKDVKDINDQEMERNNRVHISSKY 235
Query: 965 MSSNNNIVD------------VEGSISNYHVSS--IKQAHSVGINRSKE---KNEQTLTS 1093
S+ + +D VE + + HV+ + Q + G + + + +
Sbjct: 236 DRSHEDCLDSSMKHMQLKPNTVETTYTGQHVAGAPLYQMNKTGATGTPDPGTEGSHPDQT 295
Query: 1094 SDQPGPA----AAVSPSMGLKHSPXXXXXXXXXXXXXXXFSPVVQYNNQRESCDAFLNMS 1261
+DQ G A + P++ + F+P +Q +++ + ++MS
Sbjct: 296 NDQVGGANGSMDCIHPTLPVDLKFGSSSTAQPFPHNYSGFAPTMQCQCNQDAYRSSVDMS 355
Query: 1262 SAFSNLIISTLQQIPSVHAAASLAASYCPSVEVDGHLYLNPEIQGGEPSARGMKSSPSTP 1441
S FSN+++STL P+VHAAA LAASY P+ + + + N I R + S PS
Sbjct: 356 STFSNMLVSTLLSNPTVHAAARLAASYWPAADSNIPVDPNQGIFAQNAQGRHIVSPPSMA 415
Query: 1442 SLVTATIXXXXXXXXXQGIMPWCTPHLSHVF 1534
S+V AT+ QG++P P ++ F
Sbjct: 416 SVVAATVAAASAWWATQGLLPLFAPPMAFPF 446
>ref|XP_003573469.1| PREDICTED: protein LHY-like [Brachypodium distachyon]
Length = 716
Score = 213 bits (541), Expect = 4e-52
Identities = 155/445 (34%), Positives = 215/445 (48%), Gaps = 36/445 (8%)
Frame = +2
Query: 308 EQQSPREELVVKVRKPYTITKQREKWTEEEHNSFLEALKLYGRAWQRIEDHIGTKTAVQI 487
E S EE V+KVRKPYTITKQRE+WTE EH FLEALKLYGRAWQRIE+H+GTKTAVQI
Sbjct: 2 EMNSSGEETVIKVRKPYTITKQRERWTEAEHKRFLEALKLYGRAWQRIEEHVGTKTAVQI 61
Query: 488 RSHAQKFFTKLEKEALSKGASPGHVHDIDIXXXXXXXXXXXXXXXXTTTGSLSPSGEEAA 667
RSHAQKFFTKLEKEA++ G SPG HDIDI S +P+ E
Sbjct: 62 RSHAQKFFTKLEKEAINNGTSPGEAHDIDIPPPRPKRKPNCPYPRKGCLSSDAPTREAPN 121
Query: 668 AGSKPPNPICLKND---ANKEKLKVKENTESGNSSVVLNIAQHGLSASIS--NKGSTS-P 829
S N ++ A L+ + ES + S VLN+ + SAS S NK S++
Sbjct: 122 DKSTKSNISLTSSNAQTAGNATLQKLQGKESSSCSEVLNLFRDAQSASFSSVNKSSSNHG 181
Query: 830 VLMEFLPTVRSSKENAAVDNPVLPIN------TFNEATLVYQGNVLIQG-------SCMS 970
ME T K+ +D + I+ N+ + + I C+
Sbjct: 182 ASMEIEATKTEIKDMTTMDRTSVSIDMEKDVKDINDQEMERPNRIHISAKYDHLHDDCLD 241
Query: 971 SNNNIVDVEGS-------------ISNYHVSSIKQAHSVGINRSKEKNEQTLTSSDQPGP 1111
++ V ++ S+Y + + I K +QT +DQ G
Sbjct: 242 NSRQHVKLKPKSVEITHTDQHPTRASHYQMDRTGASGIPVIGTEKSPADQT---NDQVGV 298
Query: 1112 AA----AVSPSMGLKHSPXXXXXXXXXXXXXXXFSPVVQYNNQRESCDAFLNMSSAFSNL 1279
A + P++ + F+P++Q + +++ + +NMSSAFS++
Sbjct: 299 AKGNMNCLHPTLSVDPKFDNSSTAQPITHNYAAFAPMMQCHCNQDAYKSSVNMSSAFSSM 358
Query: 1280 IISTLQQIPSVHAAASLAASYCPSVEVDGHLYLNPEIQGGEPSARGMKSSPSTPSLVTAT 1459
++STL P+VHAAA LAASY PS D + N E R + S PS S+V AT
Sbjct: 359 LVSTLLSNPAVHAAARLAASYWPS--ADSPVDPNQESPSDNAQGRHIGSPPSMASIVAAT 416
Query: 1460 IXXXXXXXXXQGIMPWCTPHLSHVF 1534
+ QG++P P ++ F
Sbjct: 417 VAAASAWWATQGLLPLFAPPMAFPF 441
>gb|AAU20773.1| late elongated hypocotyl [Castanea sativa]
Length = 768
Score = 206 bits (525), Expect = 3e-50
Identities = 219/789 (27%), Positives = 309/789 (39%), Gaps = 173/789 (21%)
Frame = +2
Query: 317 SPREELVVKVRKPYTITKQREKWTEEEHNSFLEALKLYGRAWQRIEDHIGTKTAVQIRSH 496
S EELV+K RKPYTITKQRE+WTE+EHN FLEALKLYGRAWQRIE+HIGTKTAVQIRSH
Sbjct: 5 SSGEELVIKARKPYTITKQRERWTEDEHNRFLEALKLYGRAWQRIEEHIGTKTAVQIRSH 64
Query: 497 AQKFFTKLEKEALSKGASPGHVHDIDIXXXXXXXXXXXXXXXXTTTG------------- 637
AQKFF+KLEKEAL KG G DIDI T+ G
Sbjct: 65 AQKFFSKLEKEALVKGVPIGQALDIDIPPPRPKRKPSNPYPRKTSIGVPTSQVGTKDGKL 124
Query: 638 -SLSPSGEEAAAGSKPPNPICLKNDANKEKLKVKENTESGNSSV-VLNIAQHGLSASISN 811
+ + S + A P+ K + +++ K+N + S V L+ H S S +N
Sbjct: 125 FTSASSSDCKQALDLEKEPLPEKPNGDEKPENAKDNQDDNCSEVFTLHQEVHCSSVSSAN 184
Query: 812 KGST-SPV-------LMEFLPTVRSS---------------------------------- 865
+ S +PV L EF+P+++ S
Sbjct: 185 RSSVPTPVALRNLNTLREFVPSMKRSITQDETNESYVTIELKGNQKLEKADAKQTIQDTG 244
Query: 866 --------KENAAVDNPV-----------LPINTFNEATLVYQGNVLIQ------GSCMS 970
N + P+ LP++ +AT Y +V +Q G+C
Sbjct: 245 TSNGSKLGNHNVLHEKPIQGDKTQDLNCALPMDEM-QATQNYPRHVPVQVVDGSLGTCTQ 303
Query: 971 SNNNIVDVEGSISNYHVSSIKQAHSVGINRSKEKNEQTLTSSDQPGPAAAVSPSMGLKHS 1150
+ ++ + + SI + + + + H+ N + + T+ Q +V+ S H
Sbjct: 304 TPSSDMSFQDSIF-HPMGEVHRHHNPFTNPA-----ASATTEHQNNVPRSVNQSFPAFHP 357
Query: 1151 PXXXXXXXXXXXXXXXFSPVVQYNNQRESCDAFLNMSSAFSNLIISTLQQIPSVHAAASL 1330
P F+P+ + ++ +FL+MSS FS+LI+STL Q P+ HAAAS
Sbjct: 358 P---------------FTPI---RHNQDDYQSFLHMSSTFSSLIVSTLMQNPAAHAAASF 399
Query: 1331 AASYCPSVEVDGHLYLNPEIQGGEPSARGMKSSPSTPSLVTATIXXXXXXXXXQGIMPWC 1510
AA+ P V+ QG P R M S+PS ++ AT+ G++P C
Sbjct: 400 AATVWPYANVEASADSPASTQGVFP-PRQMGSTPSMAAIAAATVAAATAWWAAHGLVPLC 458
Query: 1511 TPHLSHVFXXXXXXXXXXXXXXMQVLPPLAVE----MMQVPVAHQ-----SEILKXXXXX 1663
P L F P E +Q P Q SE ++
Sbjct: 459 AP-LPTAFTCNPASTAAVPPTDSGQAPAAKTEGEVNTLQTPPLQQLDPEYSEAVQAQHSD 517
Query: 1664 XXXXXXXXNDASAKG-------------EN----SEFSELNQAK----ANRLQC---IVA 1771
+D+ G EN +E + N+ K +R C +
Sbjct: 518 SKLPIPSSSDSEESGGAKLNSGPKATDHENAVTATELHDSNKTKGRKQVDRSSCGSNTAS 577
Query: 1772 SENTIPDELETDEDNK---------------TKRFIGEARDRSNGVMGQSWMPISEQNHT 1906
S + D LE E K + R + RS M SW +SE+
Sbjct: 578 SSDRETDALEKQEMGKEEPKEPDANHSAADTSNRRCCSSSSRSFSYMNDSWKSVSEEGRL 637
Query: 1907 TFGASLERR--------PYD------------------------------SALHTGVAQT 1972
F A R P+D ++ +G
Sbjct: 638 AFQALFSREVLPQSFSPPHDLKNMGNQKDNTTDDKQNANENDGNASLLDLNSQKSGSCSV 697
Query: 1973 KGGVPTKVXXXXXXXXXXXXFKHGNFKASQSVFKPYKRCSVEAKENKTTR-----EETGN 2137
+ G+ +G KA ++ FKPYKRCSVEAKEN+ EE G
Sbjct: 698 QQGILNFEPNNNGEGLLTIGLAYGKLKARRTGFKPYKRCSVEAKENRVANASGQGEEKGP 757
Query: 2138 KRICLPEEA 2164
KRI L EA
Sbjct: 758 KRIRLEGEA 766
>ref|XP_004494878.1| PREDICTED: protein LHY-like isoform X1 [Cicer arietinum]
gi|502114154|ref|XP_004494879.1| PREDICTED: protein
LHY-like isoform X2 [Cicer arietinum]
gi|502114158|ref|XP_004494880.1| PREDICTED: protein
LHY-like isoform X3 [Cicer arietinum]
Length = 756
Score = 201 bits (510), Expect = 2e-48
Identities = 160/460 (34%), Positives = 206/460 (44%), Gaps = 55/460 (11%)
Frame = +2
Query: 302 MEEQQSPREELVVKVRKPYTITKQREKWTEEEHNSFLEALKLYGRAWQRIEDHIGTKTAV 481
M E S EE+VVK RKPYTITKQRE+WTE+EHN FLEALKLYGRAWQRIE+HIGTKTAV
Sbjct: 1 MMEAYSSGEEVVVKTRKPYTITKQRERWTEDEHNRFLEALKLYGRAWQRIEEHIGTKTAV 60
Query: 482 QIRSHAQKFFTKLEKEALSKGASPGHVHDIDIXXXXXXXXXXXXXXXXTTTGSLSPSGEE 661
QIRSHAQKFF+KLEKEAL KGA+ G +IDI T G +P+
Sbjct: 61 QIRSHAQKFFSKLEKEALVKGAAIGQSLNIDIPPPRPKRKPSNPYPRKTNVG--APTLHS 118
Query: 662 AAAGSKPPNPICLKN-----DANKEKL-----------KVKENTESGNSSVVLNIAQHG- 790
A KP + D KE L VKEN + N S V I Q
Sbjct: 119 GAKYGKPLTAFASLHGKEAMDFEKESLPEMHTDDERPTTVKENNDE-NCSKVCTILQEAP 177
Query: 791 -LSASISNKGSTSP--------VLMEFLPTVRSSKENAAVDNPVLPINTFNEATLVYQGN 943
LS S +NK S S EF+P V+ + T N+ + G
Sbjct: 178 CLSVSSANKSSISMSVPQTKSFTFREFIPLVKEVIPQDKTNESFPATETENQMLEIGDGK 237
Query: 944 VL--IQGSCMSSNNNIVDVEGSISNYHVSSIKQAHSVGINRSKEKNEQTL---------- 1087
G+C +S S+ + A +V + + + +
Sbjct: 238 QTQKTDGTCKTSKLENTCSPKSVQTEKTDGLTYASTVDEMQGNQNYPRHITVHVVDGNLG 297
Query: 1088 TSSDQPGPAAAVSPSM-----GLKHSP-----------XXXXXXXXXXXXXXXFSPVVQY 1219
TS+ P + S+ G+ P F P +
Sbjct: 298 TSTQTPSQDMLIQDSIFQPIGGINGQPNLFTNSAASNTSESQNNTARSSIHQSFPPCPLF 357
Query: 1220 -NNQRESCDAFLNMSSAFSNLIISTLQQIPSVHAAASLAASYCPSVEVDGHLYLNPEIQG 1396
+ + +FLNM S FS+LI+STL Q P+ HAAAS AA++ P VD + QG
Sbjct: 358 AQHNEDDYQSFLNMPSTFSSLIVSTLLQHPAAHAAASFAATFWPYANVDTSANSHACSQG 417
Query: 1397 GEPSARGMKSSPSTPSLVTATIXXXXXXXXXQGIMPWCTP 1516
G PS R + S PS ++ AT+ G++P CTP
Sbjct: 418 GFPS-RQIGSPPSVTAIAAATVAAATAWWAAHGLLPLCTP 456
>ref|XP_003528756.1| PREDICTED: protein LHY isoform X1 [Glycine max]
gi|571464896|ref|XP_006583195.1| PREDICTED: protein LHY
isoform X2 [Glycine max] gi|571464898|ref|XP_006583196.1|
PREDICTED: protein LHY isoform X3 [Glycine max]
gi|571464900|ref|XP_006583197.1| PREDICTED: protein LHY
isoform X4 [Glycine max] gi|571464902|ref|XP_006583198.1|
PREDICTED: protein LHY isoform X5 [Glycine max]
gi|571464905|ref|XP_006583199.1| PREDICTED: protein LHY
isoform X6 [Glycine max] gi|571464907|ref|XP_006583200.1|
PREDICTED: protein LHY isoform X7 [Glycine max]
gi|571464909|ref|XP_006583201.1| PREDICTED: protein LHY
isoform X8 [Glycine max] gi|571464911|ref|XP_006583202.1|
PREDICTED: protein LHY isoform X9 [Glycine max]
Length = 750
Score = 198 bits (503), Expect = 1e-47
Identities = 153/460 (33%), Positives = 205/460 (44%), Gaps = 60/460 (13%)
Frame = +2
Query: 317 SPREELVVKVRKPYTITKQREKWTEEEHNSFLEALKLYGRAWQRIEDHIGTKTAVQIRSH 496
S EE+VVK RKPYTITKQRE+WTEEEHN FLEALKL+GRAWQRIE+HIGTKTAVQIRSH
Sbjct: 5 SSGEEVVVKTRKPYTITKQRERWTEEEHNRFLEALKLHGRAWQRIEEHIGTKTAVQIRSH 64
Query: 497 AQKFFTKLEKEALSKGASPGHVHDIDIXXXXXXXXXXXXXXXXTTTGSLS---------- 646
AQKFFTKLEKEAL KG G DIDI T GS S
Sbjct: 65 AQKFFTKLEKEALVKGVPIGKALDIDIPPPRPKRKPNNPYPRKTRIGSASLHSGAKDGKL 124
Query: 647 ---PSGEEAAAGSKPPNPICLKNDANKEKLKVKENTESGNSSVVLNIAQHGLSASISNKG 817
S A + P+ K+D ++ VKEN + N V + Q +S+S+
Sbjct: 125 NLVESSHVNQALNLEKEPLPEKHDLDEGITTVKENKDE-NRGAVFTLLQEVPCSSVSSAN 183
Query: 818 STS-----------------PVLMEFLPTVRSSKENAAV--DNPVLPIN-------TFNE 919
+S P + E +P ++ + +N L IN T +
Sbjct: 184 KSSITMSVPLGNPCAFKEITPSVKEVIPRDEKTESFVTIELENGTLEINDRKQTNGTSKD 243
Query: 920 ATLVYQGNV---LIQGSCMSSNNNIVDVEGSISNYHVSSIKQAHSVGIN---RSKEKNEQ 1081
+TL + L+Q + + ++G N + H V N ++ ++
Sbjct: 244 STLENSDALHMKLVQNEKTDGLDCALTIDGMQGNQNYPRHVTVHVVDGNLGTNTQNPSQD 303
Query: 1082 TLTSSDQPGPAAAVSPSMGL--------KHSPXXXXXXXXXXXXXXXFSPVVQYNNQRES 1237
L P V+ + + P Q+N ++
Sbjct: 304 MLFRDSMFQPIGGVNGQQNVFTNSAPSNTSESQNNTVRSSVHQSFLPYPPFTQHN--QDD 361
Query: 1238 CDAFLNMSSAFSNLIISTLQQIPSVHAAASLAASYCPSVEVDGHLYLNPEIQGGEP---- 1405
C +F +MSS FSNLIISTL Q P+ HAAAS AA++ P Y NPE P
Sbjct: 362 CQSFFHMSSTFSNLIISTLMQNPAAHAAASFAATFWP--------YANPETSANSPRCSQ 413
Query: 1406 ---SARGMKSSPSTPSLVTATIXXXXXXXXXQGIMPWCTP 1516
+ R + S PS ++ AT+ G++P C P
Sbjct: 414 GGFTNRQIGSPPSVAAIAAATVAAATAWWAAHGLLPLCAP 453
>emb|CAD12767.2| LHY protein [Phaseolus vulgaris]
Length = 723
Score = 196 bits (498), Expect = 4e-47
Identities = 158/458 (34%), Positives = 209/458 (45%), Gaps = 58/458 (12%)
Frame = +2
Query: 317 SPREELVVKVRKPYTITKQREKWTEEEHNSFLEALKLYGRAWQRIEDHIGTKTAVQIRSH 496
S EE+VVK RKPYTITKQRE+WTEEEHN FLEALKL+GRAWQRIE+HIGTKTAVQIRSH
Sbjct: 5 SSGEEVVVKTRKPYTITKQRERWTEEEHNRFLEALKLHGRAWQRIEEHIGTKTAVQIRSH 64
Query: 497 AQKFFTKLEKEALSKGASPGHVHDIDIXXXXXXXXXXXXXXXXTT-----------TGSL 643
AQKFFTKLEKEAL KG G DIDI TT G+L
Sbjct: 65 AQKFFTKLEKEALVKGVPIGQALDIDIPPPRPKRKPSNPYPRKTTIGTATLHSGAKDGNL 124
Query: 644 SPSGEEAAAGSKPPNPICLKNDANKEKLKVKENTESGNSSVVLNIAQHGLSASIS--NKG 817
S A P+ K D ++ VKEN + N S V + Q +SIS N+
Sbjct: 125 VESSHNNQALDLEKEPLPEKYDLDEGLTTVKENKDE-NCSKVFKVIQEVPCSSISSANRS 183
Query: 818 S--------TSPVLMEFLPTVR---SSKEN------AAVDNPVLPINTFNEATLVYQGNV 946
S S VL E +V+ + EN + N L IN +A + +
Sbjct: 184 SISMSVPLGNSCVLKEITSSVKEVITRDENTESFLTVELGNRNLEINDGKQANGTSKNST 243
Query: 947 ----------LIQGSCMSSNNNIVDVEGSISNYHVSSIKQAHSVG--INRSKEKNEQTLT 1090
L+Q ++ + ++G N + H V + S + Q +
Sbjct: 244 LENSDALQTKLVQNEKTDGLDSALTIDGMQGNQNYPRHVTVHVVDGKLGTSTQNPSQDML 303
Query: 1091 SSD---QPGPAAAVSPSMGLKHSP------XXXXXXXXXXXXXXXFSPVVQYNNQRESCD 1243
D QP P++ +P + P Q+N ++
Sbjct: 304 FRDSMFQPIGGDNGQPNLFTNSAPTNTSESQNNTARSSVHQSFLPYPPFTQHN--QDDYQ 361
Query: 1244 AFLNMSSAFSNLIISTLQQIPSVHAAASLAASYCPSVEVDGHLYLNPEIQGGEP------ 1405
+FL+MSS FSNL++STL Q P+ H AAS AA++ P Y NPE P
Sbjct: 362 SFLHMSSTFSNLVVSTLLQNPAAHVAASFAATFWP--------YANPETSADSPRCSQGG 413
Query: 1406 -SARGMKSSPSTPSLVTATIXXXXXXXXXQGIMPWCTP 1516
++R + S PS ++ AT+ G++P C P
Sbjct: 414 FTSRQIGSPPSVAAIAAATVAAATAWWAAHGLLPLCLP 451