BLASTX nr result
ID: Zingiber24_contig00002121
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00002121
(240 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI35182.3| unnamed protein product [Vitis vinifera] 112 4e-23
ref|XP_002269249.1| PREDICTED: poly(rC)-binding protein 3-like [... 112 4e-23
ref|XP_002521945.1| Poly(rC)-binding protein, putative [Ricinus ... 110 2e-22
gb|EMJ06189.1| hypothetical protein PRUPE_ppa003484mg [Prunus pe... 109 3e-22
ref|XP_004139248.1| PREDICTED: poly(rC)-binding protein 3-like [... 109 3e-22
ref|XP_004494715.1| PREDICTED: poly(rC)-binding protein 3-like [... 109 4e-22
ref|XP_006487775.1| PREDICTED: poly(rC)-binding protein 3-like i... 108 6e-22
ref|XP_006487774.1| PREDICTED: poly(rC)-binding protein 3-like i... 108 6e-22
ref|XP_006423978.1| hypothetical protein CICLE_v10028209mg [Citr... 108 6e-22
ref|XP_003554712.1| PREDICTED: poly(rC)-binding protein 3-like [... 107 2e-21
ref|XP_003521747.1| PREDICTED: poly(rC)-binding protein 3 [Glyci... 107 2e-21
gb|ACU23108.1| unknown [Glycine max] 107 2e-21
gb|EOY11034.1| RNA-binding KH domain-containing protein [Theobro... 106 3e-21
ref|XP_004302066.1| PREDICTED: poly(rC)-binding protein 1-like [... 105 5e-21
gb|ESW16700.1| hypothetical protein PHAVU_007G178400g [Phaseolus... 104 1e-20
ref|XP_006588662.1| PREDICTED: poly(rC)-binding protein 1-like [... 103 2e-20
emb|CAN67081.1| hypothetical protein VITISV_007074 [Vitis vinifera] 103 2e-20
gb|ABK24418.1| unknown [Picea sitchensis] gi|224286491|gb|ACN409... 103 3e-20
gb|ESW34503.1| hypothetical protein PHAVU_001G157800g [Phaseolus... 102 4e-20
gb|ESW34502.1| hypothetical protein PHAVU_001G157800g [Phaseolus... 102 4e-20
>emb|CBI35182.3| unnamed protein product [Vitis vinifera]
Length = 511
Score = 112 bits (281), Expect = 4e-23
Identities = 61/82 (74%), Positives = 65/82 (79%), Gaps = 6/82 (7%)
Frame = -3
Query: 238 ISYIRRASGATITIQETRGVPGEMTVEISGTATQVQTAQQLIQNFMAAAPTPA------S 77
ISYIRRASGAT+TIQETRGVPGEMTVEI+GTA+QVQ AQQLIQNFMA A PA S
Sbjct: 411 ISYIRRASGATVTIQETRGVPGEMTVEINGTASQVQAAQQLIQNFMAEAAAPAQAQAGGS 470
Query: 76 MDQGYGSYQTHGGPMYGSPASH 11
DQGY SY HG MY SPAS+
Sbjct: 471 ADQGYNSYAAHGS-MYASPASN 491
>ref|XP_002269249.1| PREDICTED: poly(rC)-binding protein 3-like [Vitis vinifera]
Length = 442
Score = 112 bits (281), Expect = 4e-23
Identities = 61/82 (74%), Positives = 65/82 (79%), Gaps = 6/82 (7%)
Frame = -3
Query: 238 ISYIRRASGATITIQETRGVPGEMTVEISGTATQVQTAQQLIQNFMAAAPTPA------S 77
ISYIRRASGAT+TIQETRGVPGEMTVEI+GTA+QVQ AQQLIQNFMA A PA S
Sbjct: 342 ISYIRRASGATVTIQETRGVPGEMTVEINGTASQVQAAQQLIQNFMAEAAAPAQAQAGGS 401
Query: 76 MDQGYGSYQTHGGPMYGSPASH 11
DQGY SY HG MY SPAS+
Sbjct: 402 ADQGYNSYAAHGS-MYASPASN 422
>ref|XP_002521945.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223538749|gb|EEF40349.1| Poly(rC)-binding protein,
putative [Ricinus communis]
Length = 548
Score = 110 bits (275), Expect = 2e-22
Identities = 60/84 (71%), Positives = 64/84 (76%), Gaps = 6/84 (7%)
Frame = -3
Query: 238 ISYIRRASGATITIQETRGVPGEMTVEISGTATQVQTAQQLIQNFMAAAPTP------AS 77
ISYIRRASGAT+TIQETRGVPGEMTVEISGTA+QVQTAQQLIQNFMA A P S
Sbjct: 448 ISYIRRASGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMAEAGAPTQAQTGGS 507
Query: 76 MDQGYGSYQTHGGPMYGSPASHSG 5
DQGY Y HG +Y SP S+ G
Sbjct: 508 TDQGYNPYAAHGS-VYASPPSNPG 530
>gb|EMJ06189.1| hypothetical protein PRUPE_ppa003484mg [Prunus persica]
Length = 571
Score = 109 bits (273), Expect = 3e-22
Identities = 59/84 (70%), Positives = 65/84 (77%), Gaps = 6/84 (7%)
Frame = -3
Query: 238 ISYIRRASGATITIQETRGVPGEMTVEISGTATQVQTAQQLIQNFMAAAPTP------AS 77
ISYIRRASGAT+TIQETRGVPGEMTVEISG+A+QVQ AQQLIQNFMA A P S
Sbjct: 471 ISYIRRASGATVTIQETRGVPGEMTVEISGSASQVQAAQQLIQNFMADAGAPQPTQTAGS 530
Query: 76 MDQGYGSYQTHGGPMYGSPASHSG 5
+DQGY SY HG +Y SP S+ G
Sbjct: 531 VDQGYNSYAAHGS-VYSSPPSNQG 553
>ref|XP_004139248.1| PREDICTED: poly(rC)-binding protein 3-like [Cucumis sativus]
Length = 483
Score = 109 bits (273), Expect = 3e-22
Identities = 61/88 (69%), Positives = 67/88 (76%), Gaps = 10/88 (11%)
Frame = -3
Query: 238 ISYIRRASGATITIQETRGVPGEMTVEISGTATQVQTAQQLIQNFMAAAPTPA------S 77
ISYIRRASGAT+TIQETRGVPGEMTVE+SGTA+QVQ AQQLIQNFMA A PA S
Sbjct: 385 ISYIRRASGATVTIQETRGVPGEMTVEMSGTASQVQAAQQLIQNFMAGAGAPAQPQAGVS 444
Query: 76 MDQGYGSYQTHGGPMYGS----PASHSG 5
DQGY SY HG +Y S PA+H+G
Sbjct: 445 TDQGYNSYAAHGS-VYASPPANPAAHAG 471
>ref|XP_004494715.1| PREDICTED: poly(rC)-binding protein 3-like [Cicer arietinum]
Length = 453
Score = 109 bits (272), Expect = 4e-22
Identities = 59/85 (69%), Positives = 65/85 (76%), Gaps = 7/85 (8%)
Frame = -3
Query: 238 ISYIRRASGATITIQETRGVPGEMTVEISGTATQVQTAQQLIQNFMAAAPTPA------- 80
ISYIRRASGAT+TIQETRGVPGEMTVEISGTA+QVQTAQQLIQNFMA A PA
Sbjct: 355 ISYIRRASGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMAEAAAPAQPQTGGP 414
Query: 79 SMDQGYGSYQTHGGPMYGSPASHSG 5
+ DQGY SY H +Y SP ++ G
Sbjct: 415 TADQGYNSYPAHSS-VYASPPANPG 438
>ref|XP_006487775.1| PREDICTED: poly(rC)-binding protein 3-like isoform X2 [Citrus
sinensis]
Length = 520
Score = 108 bits (271), Expect = 6e-22
Identities = 60/84 (71%), Positives = 65/84 (77%), Gaps = 6/84 (7%)
Frame = -3
Query: 238 ISYIRRASGATITIQETRGVPGEMTVEISGTATQVQTAQQLIQNFMAAAPTP------AS 77
ISYIRR+SGAT+TIQETRGVPGEMTVEISGTA+QVQTAQQLIQNFMA A P AS
Sbjct: 423 ISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMAEAAAPSQAQMGAS 482
Query: 76 MDQGYGSYQTHGGPMYGSPASHSG 5
DQGY Y + MYGSP S+ G
Sbjct: 483 ADQGYNPYAS----MYGSPPSNPG 502
>ref|XP_006487774.1| PREDICTED: poly(rC)-binding protein 3-like isoform X1 [Citrus
sinensis]
Length = 521
Score = 108 bits (271), Expect = 6e-22
Identities = 60/84 (71%), Positives = 65/84 (77%), Gaps = 6/84 (7%)
Frame = -3
Query: 238 ISYIRRASGATITIQETRGVPGEMTVEISGTATQVQTAQQLIQNFMAAAPTP------AS 77
ISYIRR+SGAT+TIQETRGVPGEMTVEISGTA+QVQTAQQLIQNFMA A P AS
Sbjct: 424 ISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMAEAAAPSQAQMGAS 483
Query: 76 MDQGYGSYQTHGGPMYGSPASHSG 5
DQGY Y + MYGSP S+ G
Sbjct: 484 ADQGYNPYAS----MYGSPPSNPG 503
>ref|XP_006423978.1| hypothetical protein CICLE_v10028209mg [Citrus clementina]
gi|557525912|gb|ESR37218.1| hypothetical protein
CICLE_v10028209mg [Citrus clementina]
Length = 521
Score = 108 bits (271), Expect = 6e-22
Identities = 60/84 (71%), Positives = 65/84 (77%), Gaps = 6/84 (7%)
Frame = -3
Query: 238 ISYIRRASGATITIQETRGVPGEMTVEISGTATQVQTAQQLIQNFMAAAPTP------AS 77
ISYIRR+SGAT+TIQETRGVPGEMTVEISGTA+QVQTAQQLIQNFMA A P AS
Sbjct: 424 ISYIRRSSGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMAEAAAPSQAQMGAS 483
Query: 76 MDQGYGSYQTHGGPMYGSPASHSG 5
DQGY Y + MYGSP S+ G
Sbjct: 484 ADQGYNPYAS----MYGSPPSNPG 503
>ref|XP_003554712.1| PREDICTED: poly(rC)-binding protein 3-like [Glycine max]
Length = 446
Score = 107 bits (267), Expect = 2e-21
Identities = 61/89 (68%), Positives = 66/89 (74%), Gaps = 11/89 (12%)
Frame = -3
Query: 238 ISYIRRASGATITIQETRGVPGEMTVEISGTATQVQTAQQLIQNFM----AAAPTPA--- 80
ISYIRRASGAT+TIQE RGVPGEMTVEISGTA+QVQTAQQLIQNFM AAA PA
Sbjct: 344 ISYIRRASGATVTIQEARGVPGEMTVEISGTASQVQTAQQLIQNFMAEAAAAAAAPAQPQ 403
Query: 79 ----SMDQGYGSYQTHGGPMYGSPASHSG 5
+ DQGY SY HG +Y SP S+ G
Sbjct: 404 TTVPAADQGYNSYPAHGS-LYASPPSNPG 431
>ref|XP_003521747.1| PREDICTED: poly(rC)-binding protein 3 [Glycine max]
Length = 443
Score = 107 bits (266), Expect = 2e-21
Identities = 61/89 (68%), Positives = 66/89 (74%), Gaps = 11/89 (12%)
Frame = -3
Query: 238 ISYIRRASGATITIQETRGVPGEMTVEISGTATQVQTAQQLIQNFM----AAAPTPA--- 80
ISYIRRASGAT+TIQE RGVPGEMTVEISGTA+QVQTAQQLIQNFM AAA PA
Sbjct: 341 ISYIRRASGATVTIQEARGVPGEMTVEISGTASQVQTAQQLIQNFMAEAAAAAAAPAQPQ 400
Query: 79 ----SMDQGYGSYQTHGGPMYGSPASHSG 5
+ DQGY SY HG +Y SP S+ G
Sbjct: 401 TTVPAADQGYNSYPAHGS-VYASPPSNPG 428
>gb|ACU23108.1| unknown [Glycine max]
Length = 208
Score = 107 bits (266), Expect = 2e-21
Identities = 61/89 (68%), Positives = 66/89 (74%), Gaps = 11/89 (12%)
Frame = -3
Query: 238 ISYIRRASGATITIQETRGVPGEMTVEISGTATQVQTAQQLIQNFM----AAAPTPA--- 80
ISYIRRASGAT+TIQE RGVPGEMTVEISGTA+QVQTAQQLIQNFM AAA PA
Sbjct: 106 ISYIRRASGATVTIQEARGVPGEMTVEISGTASQVQTAQQLIQNFMAEAAAAAAAPAQPQ 165
Query: 79 ----SMDQGYGSYQTHGGPMYGSPASHSG 5
+ DQGY SY HG +Y SP S+ G
Sbjct: 166 TTVPAADQGYNSYPAHGS-VYASPPSNPG 193
>gb|EOY11034.1| RNA-binding KH domain-containing protein [Theobroma cacao]
Length = 499
Score = 106 bits (265), Expect = 3e-21
Identities = 58/84 (69%), Positives = 63/84 (75%), Gaps = 6/84 (7%)
Frame = -3
Query: 238 ISYIRRASGATITIQETRGVPGEMTVEISGTATQVQTAQQLIQNFMAAAPTPA------S 77
ISYIRRASGAT+TIQETRGVPGEMTVEISGTA+QVQTAQQLIQNFMA A PA +
Sbjct: 399 ISYIRRASGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNFMAEAAAPAQGQTGGA 458
Query: 76 MDQGYGSYQTHGGPMYGSPASHSG 5
DQ Y Y H +Y SP S+ G
Sbjct: 459 TDQAYNPYAAHSS-VYASPPSNPG 481
>ref|XP_004302066.1| PREDICTED: poly(rC)-binding protein 1-like [Fragaria vesca subsp.
vesca]
Length = 545
Score = 105 bits (263), Expect = 5e-21
Identities = 56/84 (66%), Positives = 63/84 (75%), Gaps = 6/84 (7%)
Frame = -3
Query: 238 ISYIRRASGATITIQETRGVPGEMTVEISGTATQVQTAQQLIQNFMAAAPTPAS------ 77
ISYIRRASGAT+TIQETRGVPGEMTVEISG+A+QVQ A+QLIQNFM A P
Sbjct: 442 ISYIRRASGATVTIQETRGVPGEMTVEISGSASQVQAAEQLIQNFMVEAGAPQQPQAAPP 501
Query: 76 MDQGYGSYQTHGGPMYGSPASHSG 5
+DQGY SY HG +Y SP S+ G
Sbjct: 502 VDQGYNSYSAHGS-VYASPPSNQG 524
>gb|ESW16700.1| hypothetical protein PHAVU_007G178400g [Phaseolus vulgaris]
Length = 587
Score = 104 bits (259), Expect = 1e-20
Identities = 58/88 (65%), Positives = 67/88 (76%), Gaps = 10/88 (11%)
Frame = -3
Query: 238 ISYIRRASGATITIQETRGVPGEMTVEISGTATQVQTAQQLIQNFMAAAPTP------AS 77
ISYIRRASGA+ITIQETRGVPGEMTVEISGTA+Q+Q AQQL+QNFMA A + S
Sbjct: 484 ISYIRRASGASITIQETRGVPGEMTVEISGTASQIQAAQQLVQNFMAEAASATQDHMGGS 543
Query: 76 MDQGYGSYQTHGGPMYGSP----ASHSG 5
M+QGY SY T+ P+Y SP A H+G
Sbjct: 544 MNQGYNSYPTN-APVYASPPSGAAGHAG 570
>ref|XP_006588662.1| PREDICTED: poly(rC)-binding protein 1-like [Glycine max]
Length = 565
Score = 103 bits (258), Expect = 2e-20
Identities = 58/88 (65%), Positives = 68/88 (77%), Gaps = 10/88 (11%)
Frame = -3
Query: 238 ISYIRRASGATITIQETRGVPGEMTVEISGTATQVQTAQQLIQNFMAAAPTPA------S 77
ISYIRRASGA+ITIQETRGVPGEMTVEISGTA+Q+Q AQQL+QNFMA A + A S
Sbjct: 463 ISYIRRASGASITIQETRGVPGEMTVEISGTASQIQAAQQLVQNFMAEAASAAQDHMGGS 522
Query: 76 MDQGYGSYQTHGGPMYGSP----ASHSG 5
++QGY SY T+ P+Y SP A H+G
Sbjct: 523 INQGYNSYPTN--PVYASPPSSAAGHAG 548
>emb|CAN67081.1| hypothetical protein VITISV_007074 [Vitis vinifera]
Length = 534
Score = 103 bits (258), Expect = 2e-20
Identities = 61/94 (64%), Positives = 65/94 (69%), Gaps = 18/94 (19%)
Frame = -3
Query: 238 ISYIRRASGATITIQETRGVPGEMTVEISGTATQVQTAQQLIQ------------NFMAA 95
ISYIRRASGAT+TIQETRGVPGEMTVEI+GTA+QVQ AQQLIQ NFMA
Sbjct: 422 ISYIRRASGATVTIQETRGVPGEMTVEINGTASQVQAAQQLIQALFLPVFDTKLLNFMAE 481
Query: 94 APTPA------SMDQGYGSYQTHGGPMYGSPASH 11
A PA S DQGY SY HG MY SPAS+
Sbjct: 482 AAAPAQAQAGGSADQGYNSYAAHGS-MYASPASN 514
>gb|ABK24418.1| unknown [Picea sitchensis] gi|224286491|gb|ACN40952.1| unknown
[Picea sitchensis]
Length = 481
Score = 103 bits (256), Expect = 3e-20
Identities = 56/83 (67%), Positives = 62/83 (74%), Gaps = 5/83 (6%)
Frame = -3
Query: 238 ISYIRRASGATITIQETRGVPGEMTVEISGTATQVQTAQQLIQNFMAAAPTP-----ASM 74
ISY+RR SGATI +QETRGVPGEMTVEI GTATQVQTAQQLIQNFMA A P +S+
Sbjct: 381 ISYMRRNSGATIAVQETRGVPGEMTVEIRGTATQVQTAQQLIQNFMAGASGPPANTYSSV 440
Query: 73 DQGYGSYQTHGGPMYGSPASHSG 5
D GY SY T MY SP ++G
Sbjct: 441 DSGYNSYPTQNS-MYSSPQPNTG 462
>gb|ESW34503.1| hypothetical protein PHAVU_001G157800g [Phaseolus vulgaris]
Length = 354
Score = 102 bits (255), Expect = 4e-20
Identities = 54/84 (64%), Positives = 65/84 (77%), Gaps = 6/84 (7%)
Frame = -3
Query: 238 ISYIRRASGATITIQETRGVPGEMTVEISGTATQVQTAQQLIQNFMAAA------PTPAS 77
ISYIRRASGA+ITIQETRGVPGEMTVE+SGT++Q+Q AQQL+QNFMA A P S
Sbjct: 251 ISYIRRASGASITIQETRGVPGEMTVEMSGTSSQIQAAQQLVQNFMAEAANATQDPMGGS 310
Query: 76 MDQGYGSYQTHGGPMYGSPASHSG 5
+ QGY +Y T+ P+Y SP S +G
Sbjct: 311 VSQGYSAYPTN-APVYSSPPSSTG 333
>gb|ESW34502.1| hypothetical protein PHAVU_001G157800g [Phaseolus vulgaris]
Length = 528
Score = 102 bits (255), Expect = 4e-20
Identities = 54/84 (64%), Positives = 65/84 (77%), Gaps = 6/84 (7%)
Frame = -3
Query: 238 ISYIRRASGATITIQETRGVPGEMTVEISGTATQVQTAQQLIQNFMAAA------PTPAS 77
ISYIRRASGA+ITIQETRGVPGEMTVE+SGT++Q+Q AQQL+QNFMA A P S
Sbjct: 425 ISYIRRASGASITIQETRGVPGEMTVEMSGTSSQIQAAQQLVQNFMAEAANATQDPMGGS 484
Query: 76 MDQGYGSYQTHGGPMYGSPASHSG 5
+ QGY +Y T+ P+Y SP S +G
Sbjct: 485 VSQGYSAYPTN-APVYSSPPSSTG 507