BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00002118
         (1383 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAR02191.1| phytochrome A [Cyrtosia septentrionalis]               618   e-174
gb|EXB57569.1| Phytochrome type A [Morus notabilis]                   603   e-170
ref|XP_002512596.1| phytochrome A, putative [Ricinus communis] g...   593   e-167
gb|AAR08427.1| phytochrome A [Monotropastrum globosum]                592   e-166
ref|XP_006339917.1| PREDICTED: type A phytochrome [Solanum tuber...   591   e-166
sp|O49934.1|PHYA_POPTM RecName: Full=Phytochrome A gi|2664190|em...   590   e-166
gb|AGT50253.1| phytochrome A1 [Ipomoea batatas]                       590   e-166
gb|AEK26583.1| phytochrome A [Populus tremula]                        590   e-166
gb|AEA50880.1| phyA [Populus tremula]                                 590   e-166
ref|XP_002278610.1| PREDICTED: phytochrome A1 [Vitis vinifera] g...   590   e-166
gb|AGT50255.1| phytochrome A3 [Ipomoea batatas]                       590   e-166
gb|AGT50254.1| phytochrome A2 [Ipomoea batatas]                       590   e-166
emb|CDG41614.1| Phytochrome A [Rhazya stricta]                        590   e-166
ref|XP_002318913.1| phytochrome A family protein [Populus tricho...   589   e-166
gb|ACC60969.1| phytochrome A [Vitis riparia]                          589   e-165
gb|EOY11803.1| Phytochrome A [Theobroma cacao]                        588   e-165
ref|XP_004302312.1| PREDICTED: phytochrome A-like [Fragaria vesc...   588   e-165
gb|AAP06787.1| phytochrome A1 apoprotein [Zea mays] gi|414872502...   587   e-165
ref|NP_001234490.1| alternative transcript type 3 [Solanum lycop...   586   e-165
sp|P33530.1|PHYA1_TOBAC RecName: Full=Phytochrome A1 gi|297478|e...   585   e-164

>gb|AAR02191.1| phytochrome A [Cyrtosia septentrionalis]
          Length = 1118

 Score =  618 bits (1594), Expect = e-174
 Identities = 304/364 (83%), Positives = 332/364 (91%), Gaps = 2/364 (0%)
 Frame = +2

Query: 296  SARIVAQTTVDAKLDAEFEEYGGSFDYSQSVSALRETPGEERRSEKVTAYLQHIQKGKLI 475
            SARI+AQTTVDAKLDAEF+  G  FDYSQS+ A    P +E+RSEKVTAYLQHIQ+GKLI
Sbjct: 19   SARIIAQTTVDAKLDAEFDAMGTCFDYSQSIRA----PPDEQRSEKVTAYLQHIQRGKLI 74

Query: 476  QPFGCVLALDEKAFKVIAYSENAPEMLTMVSHTVPSVGDHPTLGIGTDVRSLFTSPSTAA 655
            QPFGC+LALDEK FKV+A+SENAPEMLTMVS TVPSVGDHPT+ IGTDVR+LFTSPSTAA
Sbjct: 75   QPFGCLLALDEKTFKVLAFSENAPEMLTMVSFTVPSVGDHPTIVIGTDVRNLFTSPSTAA 134

Query: 656  LQKALGFVEVSLLNPILVHCKTSGKPFYAIVHRVTGCLIIDFEPVKPSEVPMTAAGALQS 835
            LQKALGF EVSLLNPILVHCK+SG+PFYAIVHRVTGCLI+DFEPVKP++VPMTAAGALQS
Sbjct: 135  LQKALGFAEVSLLNPILVHCKSSGRPFYAIVHRVTGCLIVDFEPVKPNDVPMTAAGALQS 194

Query: 836  YKLAAKAIAKLQSLPGGNMQRLCNTVIEEVFDLTGYDRVMVYKFHDDDHGEVFAEITKPG 1015
            YKLAAKAI+KLQSLP G+M++LCNTVIEEVF+LTGYDRVMVYKFH+DDHGEVFAEITKPG
Sbjct: 195  YKLAAKAISKLQSLPSGSMEKLCNTVIEEVFELTGYDRVMVYKFHEDDHGEVFAEITKPG 254

Query: 1016 LEPYLGLHYPATDIPQAARFLFMKNKVRIICDCRAKPVKIYQDDKLPFDITFCGSTLRAP 1195
            LE Y GLHYPATDIPQAARFLFMKNKVR+ICDC AK VK+YQD KLPFDI+FCGSTLRAP
Sbjct: 255  LESYFGLHYPATDIPQAARFLFMKNKVRMICDCHAKHVKVYQDKKLPFDISFCGSTLRAP 314

Query: 1196 HSCHLQYMENMNSIASLVMAVAVNESGEN--EDAETEQQQQKRKRLWGLVVCHNESPRFV 1369
            HSCHLQYMENMNSIASLVMAV VNE  E+   +AE      +RKRLWGLVVCHNESPRFV
Sbjct: 315  HSCHLQYMENMNSIASLVMAVVVNEGEEDGGNEAEENSPPHRRKRLWGLVVCHNESPRFV 374

Query: 1370 PFPL 1381
            PFPL
Sbjct: 375  PFPL 378


>gb|EXB57569.1| Phytochrome type A [Morus notabilis]
          Length = 1130

 Score =  603 bits (1555), Expect = e-170
 Identities = 295/365 (80%), Positives = 326/365 (89%), Gaps = 2/365 (0%)
 Frame = +2

Query: 293  HSARIVAQTTVDAKLDAEFEEYGGSFDYSQSVSALRETPGEER-RSEKVT-AYLQHIQKG 466
            HSARIVAQTTVDAKL AEFEE G SFDYS S+     T  +++ RS+KVT AYL HIQKG
Sbjct: 18   HSARIVAQTTVDAKLHAEFEETGSSFDYSSSIRVSNSTSADQQPRSDKVTTAYLHHIQKG 77

Query: 467  KLIQPFGCVLALDEKAFKVIAYSENAPEMLTMVSHTVPSVGDHPTLGIGTDVRSLFTSPS 646
            KLIQPFGC+LALDEK  KVIAYSENAPEMLTMVSH VPSVGDHP LGIGTDVR++FT+PS
Sbjct: 78   KLIQPFGCLLALDEKTLKVIAYSENAPEMLTMVSHAVPSVGDHPVLGIGTDVRTIFTAPS 137

Query: 647  TAALQKALGFVEVSLLNPILVHCKTSGKPFYAIVHRVTGCLIIDFEPVKPSEVPMTAAGA 826
             +ALQKALGF +VSLLNPILVHCKTSGKPFYAIVHRVTG LIIDFEPVKP EVPMTAAGA
Sbjct: 138  ASALQKALGFGDVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGA 197

Query: 827  LQSYKLAAKAIAKLQSLPGGNMQRLCNTVIEEVFDLTGYDRVMVYKFHDDDHGEVFAEIT 1006
            LQSYKLAAKAI +LQSLP G+M+RLC+T+++EVF+LTGYDRVM YKFH+DDHGEV +EIT
Sbjct: 198  LQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAYKFHEDDHGEVVSEIT 257

Query: 1007 KPGLEPYLGLHYPATDIPQAARFLFMKNKVRIICDCRAKPVKIYQDDKLPFDITFCGSTL 1186
            KPGLEPYLGLHYPATDIPQAARFLFMKNKVR+I DC AK VK++QD+KLPFD+T CGSTL
Sbjct: 258  KPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVKVFQDEKLPFDLTLCGSTL 317

Query: 1187 RAPHSCHLQYMENMNSIASLVMAVAVNESGENEDAETEQQQQKRKRLWGLVVCHNESPRF 1366
            RAPHSCHLQYM+NMNSIASLVMAV VNE  +++D+    Q QKRKRLWGLVVCHN SPRF
Sbjct: 318  RAPHSCHLQYMDNMNSIASLVMAVVVNEGDDDDDSPNSSQPQKRKRLWGLVVCHNTSPRF 377

Query: 1367 VPFPL 1381
            VPFPL
Sbjct: 378  VPFPL 382


>ref|XP_002512596.1| phytochrome A, putative [Ricinus communis]
            gi|223548557|gb|EEF50048.1| phytochrome A, putative
            [Ricinus communis]
          Length = 1124

 Score =  593 bits (1529), Expect = e-167
 Identities = 289/365 (79%), Positives = 324/365 (88%), Gaps = 2/365 (0%)
 Frame = +2

Query: 293  HSARIVAQTTVDAKLDAEFEEYGGSFDYSQSVSALRETPGEER-RSEKVT-AYLQHIQKG 466
            HSARI++QT VDAKL A+FEE G SFDYS SV     T  +   RS+KVT AYL HIQKG
Sbjct: 18   HSARIISQTAVDAKLHADFEESGSSFDYSNSVHVTSSTGLDHAPRSDKVTTAYLHHIQKG 77

Query: 467  KLIQPFGCVLALDEKAFKVIAYSENAPEMLTMVSHTVPSVGDHPTLGIGTDVRSLFTSPS 646
            KLIQPFGC+LALDEK +KVIAYSENAPEMLTMVSH VPSVGDHP LGIGTD+R++FT+PS
Sbjct: 78   KLIQPFGCLLALDEKTYKVIAYSENAPEMLTMVSHAVPSVGDHPVLGIGTDIRTIFTAPS 137

Query: 647  TAALQKALGFVEVSLLNPILVHCKTSGKPFYAIVHRVTGCLIIDFEPVKPSEVPMTAAGA 826
             +ALQKALGF +VSLLNPILVHCKTSGKPFYAIVHRVTG  IIDFEPVKP EVPMTAAGA
Sbjct: 138  ASALQKALGFGDVSLLNPILVHCKTSGKPFYAIVHRVTGSFIIDFEPVKPYEVPMTAAGA 197

Query: 827  LQSYKLAAKAIAKLQSLPGGNMQRLCNTVIEEVFDLTGYDRVMVYKFHDDDHGEVFAEIT 1006
            LQSYKLAAKAI++LQSLP G+M+RLC+T+++EVF+LTGYDRVM YKFHDDDHGEV +E+T
Sbjct: 198  LQSYKLAAKAISRLQSLPSGSMERLCDTMVQEVFELTGYDRVMTYKFHDDDHGEVISEVT 257

Query: 1007 KPGLEPYLGLHYPATDIPQAARFLFMKNKVRIICDCRAKPVKIYQDDKLPFDITFCGSTL 1186
            KPGLEPYLGLHYPATDIPQAARFLFMKNKVR+I DCRAK VK+ QD+KLP ++T CGSTL
Sbjct: 258  KPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRAKHVKVLQDEKLPLELTLCGSTL 317

Query: 1187 RAPHSCHLQYMENMNSIASLVMAVAVNESGENEDAETEQQQQKRKRLWGLVVCHNESPRF 1366
            RAPHSCHLQYMENM+S+ASLVMAV VNE  E++D+ T  Q QKRKRLWGLVVCHN +PRF
Sbjct: 318  RAPHSCHLQYMENMDSVASLVMAVVVNEGDEDDDSPTSVQPQKRKRLWGLVVCHNTTPRF 377

Query: 1367 VPFPL 1381
            VPFPL
Sbjct: 378  VPFPL 382


>gb|AAR08427.1| phytochrome A [Monotropastrum globosum]
          Length = 1130

 Score =  592 bits (1525), Expect = e-166
 Identities = 293/369 (79%), Positives = 324/369 (87%), Gaps = 6/369 (1%)
 Frame = +2

Query: 293  HSARIVAQTTVDAKLDAEFEEYGGSFDYSQSVSALRETPGE-ERRSEKVT-AYLQHIQKG 466
            HSARI+AQTTVDAKL A+FEE GGSFDYS SV       G+ + RS+KVT AYL  IQ+G
Sbjct: 18   HSARIIAQTTVDAKLHADFEESGGSFDYSTSVRFTGTVGGDIQPRSDKVTTAYLHQIQRG 77

Query: 467  KLIQPFGCVLALDEKAFKVIAYSENAPEMLTMVSHTVPSVGDHPTLGIGTDVRSLFTSPS 646
            KLIQPFGC+LA+DEK FKVIAYSENAPEMLTMVSH VPSVGDHP LGIGTDVR++FT+PS
Sbjct: 78   KLIQPFGCLLAVDEKTFKVIAYSENAPEMLTMVSHAVPSVGDHPLLGIGTDVRTIFTNPS 137

Query: 647  TAALQKALGFVEVSLLNPILVHCKTSGKPFYAIVHRVTGCLIIDFEPVKPSEVPMTAAGA 826
             AALQKA+G+ EVSLLNPILVHCKTSGKPFYAIVHRVTG LIIDFEPVKP EVPMTAAGA
Sbjct: 138  AAALQKAMGYGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGA 197

Query: 827  LQSYKLAAKAIAKLQSLPGGNMQRLCNTVIEEVFDLTGYDRVMVYKFHDDDHGEVFAEIT 1006
            LQSYKLAAKAI +LQSLP GNM+ LC+ +++EVF+LTGYDRVMVYKFHDDDHGEVF+E+T
Sbjct: 198  LQSYKLAAKAITRLQSLPSGNMRILCDAMVQEVFELTGYDRVMVYKFHDDDHGEVFSELT 257

Query: 1007 KPGLEPYLGLHYPATDIPQAARFLFMKNKVRIICDCRAKPVKIYQDDKLPFDITFCGSTL 1186
            KPGLEPYLGLHYPATDIPQAARFLFMKNK+R+ICDC AK VK+ QDDKLP D+T CGSTL
Sbjct: 258  KPGLEPYLGLHYPATDIPQAARFLFMKNKIRMICDCHAKQVKVIQDDKLPIDLTLCGSTL 317

Query: 1187 RAPHSCHLQYMENMNSIASLVMAVAVNESGENED----AETEQQQQKRKRLWGLVVCHNE 1354
            RAPHSCHLQYMENMNSIASLVM+V VNE  E  D    + +  QQQK KRLWGL+VCHN 
Sbjct: 318  RAPHSCHLQYMENMNSIASLVMSVVVNEGDEEGDGGGSSVSSNQQQKIKRLWGLLVCHNT 377

Query: 1355 SPRFVPFPL 1381
            +PRFVPFPL
Sbjct: 378  TPRFVPFPL 386


>ref|XP_006339917.1| PREDICTED: type A phytochrome [Solanum tuberosum]
          Length = 1123

 Score =  591 bits (1524), Expect = e-166
 Identities = 289/365 (79%), Positives = 320/365 (87%), Gaps = 2/365 (0%)
 Frame = +2

Query: 293  HSARIVAQTTVDAKLDAEFEEYGGSFDYSQSVSALRETPGEER-RSEKVT-AYLQHIQKG 466
            HSARI+AQT++DAKL A+FEE G SFDYS SV       GE+R +S+KVT AYL  IQKG
Sbjct: 18   HSARIIAQTSIDAKLHADFEESGDSFDYSSSVRVTNVAEGEQRPKSDKVTTAYLHQIQKG 77

Query: 467  KLIQPFGCVLALDEKAFKVIAYSENAPEMLTMVSHTVPSVGDHPTLGIGTDVRSLFTSPS 646
            K IQPFGC+LALDEK  KVIA+SENAPEMLTMVSH VPSVG+HP LGIGTD+R++FT PS
Sbjct: 78   KFIQPFGCLLALDEKTLKVIAFSENAPEMLTMVSHAVPSVGEHPVLGIGTDIRTIFTGPS 137

Query: 647  TAALQKALGFVEVSLLNPILVHCKTSGKPFYAIVHRVTGCLIIDFEPVKPSEVPMTAAGA 826
             AALQKALGF EVSLLNP+LVHCK SGKPFYAIVHRVTG LIIDFEPVKP EVPMTAAGA
Sbjct: 138  GAALQKALGFGEVSLLNPVLVHCKNSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGA 197

Query: 827  LQSYKLAAKAIAKLQSLPGGNMQRLCNTVIEEVFDLTGYDRVMVYKFHDDDHGEVFAEIT 1006
            LQSYKLAAKAI +LQSLP G+M+RLC+T+++EVF+LTGYDRVM YKFHDDDHGEV +EIT
Sbjct: 198  LQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMGYKFHDDDHGEVVSEIT 257

Query: 1007 KPGLEPYLGLHYPATDIPQAARFLFMKNKVRIICDCRAKPVKIYQDDKLPFDITFCGSTL 1186
            KPGLEPYLGLHYPATDIPQAARFLFMKNKVR+ICDCRAK VK+ QD+KLPFD+T CGSTL
Sbjct: 258  KPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVKVVQDEKLPFDLTLCGSTL 317

Query: 1187 RAPHSCHLQYMENMNSIASLVMAVAVNESGENEDAETEQQQQKRKRLWGLVVCHNESPRF 1366
            RAPH CHLQYMENMNSIASLVMAV VN+  E  ++    Q QKRKRLWGLVVCHN +PRF
Sbjct: 318  RAPHYCHLQYMENMNSIASLVMAVVVNDGDEEGESSDSSQSQKRKRLWGLVVCHNTTPRF 377

Query: 1367 VPFPL 1381
            VPFPL
Sbjct: 378  VPFPL 382


>sp|O49934.1|PHYA_POPTM RecName: Full=Phytochrome A gi|2664190|emb|CAA04679.1| phytochrome A
            [Populus tremula x Populus tremuloides]
          Length = 1125

 Score =  590 bits (1521), Expect = e-166
 Identities = 286/365 (78%), Positives = 321/365 (87%), Gaps = 2/365 (0%)
 Frame = +2

Query: 293  HSARIVAQTTVDAKLDAEFEEYGGSFDYSQSVSALRETPGEER-RSEKVT-AYLQHIQKG 466
            HSARI+AQTTVDAKL A+FEE G SFDYS SV       G++  RS+KVT AYL HIQKG
Sbjct: 18   HSARIIAQTTVDAKLHADFEESGSSFDYSSSVRVTDSVGGDQPPRSDKVTTAYLHHIQKG 77

Query: 467  KLIQPFGCVLALDEKAFKVIAYSENAPEMLTMVSHTVPSVGDHPTLGIGTDVRSLFTSPS 646
            KLIQPFGC+LALDEK F+V+AYSENAPE+LTMVSH VPSVG+HP LGIGTD+R++FT+PS
Sbjct: 78   KLIQPFGCLLALDEKTFRVVAYSENAPELLTMVSHAVPSVGEHPVLGIGTDIRTIFTAPS 137

Query: 647  TAALQKALGFVEVSLLNPILVHCKTSGKPFYAIVHRVTGCLIIDFEPVKPSEVPMTAAGA 826
             +ALQKA+GF +VSLLNPILVHCKTSGKPFYAIVHRVTG LIIDFEPVKP EVPMTAAGA
Sbjct: 138  ASALQKAMGFGDVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGA 197

Query: 827  LQSYKLAAKAIAKLQSLPGGNMQRLCNTVIEEVFDLTGYDRVMVYKFHDDDHGEVFAEIT 1006
            LQSYKLAAKAI +LQSLP G+M+RLC+T+++EVF+LTGYDR M YKFHDDDHGEV +E+T
Sbjct: 198  LQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRAMAYKFHDDDHGEVVSEVT 257

Query: 1007 KPGLEPYLGLHYPATDIPQAARFLFMKNKVRIICDCRAKPVKIYQDDKLPFDITFCGSTL 1186
            KPG+EPYLGLHYPATDIPQA+RFLFMKNKVR+I DC AK VK+ QD+KLPFD+T CGSTL
Sbjct: 258  KPGMEPYLGLHYPATDIPQASRFLFMKNKVRMIVDCHAKHVKVLQDEKLPFDLTLCGSTL 317

Query: 1187 RAPHSCHLQYMENMNSIASLVMAVAVNESGENEDAETEQQQQKRKRLWGLVVCHNESPRF 1366
            RAPHSCHLQYMENMNSIASLVMAV VN+  E+ D       QKRKRLWGLVVCHN SPRF
Sbjct: 318  RAPHSCHLQYMENMNSIASLVMAVVVNDGDEDGDTPDSANPQKRKRLWGLVVCHNTSPRF 377

Query: 1367 VPFPL 1381
            VPFPL
Sbjct: 378  VPFPL 382


>gb|AGT50253.1| phytochrome A1 [Ipomoea batatas]
          Length = 1127

 Score =  590 bits (1521), Expect = e-166
 Identities = 289/365 (79%), Positives = 322/365 (88%), Gaps = 2/365 (0%)
 Frame = +2

Query: 293  HSARIVAQTTVDAKLDAEFEEYGGSFDYSQSVSALRETPGEER-RSEKVT-AYLQHIQKG 466
            HSARI+AQT++DAKL AEFEE G SFDYS SV       G ++ RS+KVT AYL  IQK 
Sbjct: 18   HSARIIAQTSIDAKLHAEFEESGDSFDYSSSVRVTSVDAGVQKPRSDKVTTAYLHQIQKA 77

Query: 467  KLIQPFGCVLALDEKAFKVIAYSENAPEMLTMVSHTVPSVGDHPTLGIGTDVRSLFTSPS 646
            K IQPFGC+LALDEK FKVIA+SENAPEMLTMVSH VPSVGDHP LGIGTD+R++FTSPS
Sbjct: 78   KYIQPFGCLLALDEKTFKVIAFSENAPEMLTMVSHAVPSVGDHPVLGIGTDIRTIFTSPS 137

Query: 647  TAALQKALGFVEVSLLNPILVHCKTSGKPFYAIVHRVTGCLIIDFEPVKPSEVPMTAAGA 826
             AALQKALGF EVSLLNPILVHCKTSGKPFYAI+HRVTG LI+DFEPVKP EVPMTAAGA
Sbjct: 138  AAALQKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLIVDFEPVKPYEVPMTAAGA 197

Query: 827  LQSYKLAAKAIAKLQSLPGGNMQRLCNTVIEEVFDLTGYDRVMVYKFHDDDHGEVFAEIT 1006
            LQSYKLAAKAIA+LQSLP G+M+RLC+T+++EVF+LTGYDRVM+YKFHDDDHGEV +EIT
Sbjct: 198  LQSYKLAAKAIARLQSLPSGSMERLCDTMVQEVFELTGYDRVMIYKFHDDDHGEVVSEIT 257

Query: 1007 KPGLEPYLGLHYPATDIPQAARFLFMKNKVRIICDCRAKPVKIYQDDKLPFDITFCGSTL 1186
            KPGLEPYLGLHYPATDIPQAARFLFMKNKVR+ICDCRAK V++ QD+KL  D+T CGSTL
Sbjct: 258  KPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVRVVQDEKLSIDLTLCGSTL 317

Query: 1187 RAPHSCHLQYMENMNSIASLVMAVAVNESGENEDAETEQQQQKRKRLWGLVVCHNESPRF 1366
            RAPHSCHLQYMENMNSIASLVMAV VN+  +  +A    + QKRKRLWGLVVCHN +PRF
Sbjct: 318  RAPHSCHLQYMENMNSIASLVMAVVVNDGDDEGEASESGRIQKRKRLWGLVVCHNTTPRF 377

Query: 1367 VPFPL 1381
            VPFPL
Sbjct: 378  VPFPL 382


>gb|AEK26583.1| phytochrome A [Populus tremula]
          Length = 1109

 Score =  590 bits (1521), Expect = e-166
 Identities = 286/365 (78%), Positives = 321/365 (87%), Gaps = 2/365 (0%)
 Frame = +2

Query: 293  HSARIVAQTTVDAKLDAEFEEYGGSFDYSQSVSALRETPGEER-RSEKVT-AYLQHIQKG 466
            HSARI+AQTTVDAKL A+FEE G SFDYS SV       G++  RS+KVT AYL HIQKG
Sbjct: 18   HSARIIAQTTVDAKLHADFEESGSSFDYSSSVRVTDSVGGDQPPRSDKVTTAYLHHIQKG 77

Query: 467  KLIQPFGCVLALDEKAFKVIAYSENAPEMLTMVSHTVPSVGDHPTLGIGTDVRSLFTSPS 646
            KLIQPFGC+LALDEK F+V+AYSENAPE+LTMVSH VPSVG+HP LGIGTD+R++FT+PS
Sbjct: 78   KLIQPFGCLLALDEKTFRVVAYSENAPELLTMVSHAVPSVGEHPVLGIGTDIRTIFTAPS 137

Query: 647  TAALQKALGFVEVSLLNPILVHCKTSGKPFYAIVHRVTGCLIIDFEPVKPSEVPMTAAGA 826
             +ALQKA+GF +VSLLNPILVHCKTSGKPFYAIVHRVTG LIIDFEPVKP EVPMTAAGA
Sbjct: 138  ASALQKAMGFGDVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGA 197

Query: 827  LQSYKLAAKAIAKLQSLPGGNMQRLCNTVIEEVFDLTGYDRVMVYKFHDDDHGEVFAEIT 1006
            LQSYKLAAKAI +LQSLP G+M+RLC+T+++EVF+LTGYDR M YKFHDDDHGEV +E+T
Sbjct: 198  LQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRAMAYKFHDDDHGEVVSEVT 257

Query: 1007 KPGLEPYLGLHYPATDIPQAARFLFMKNKVRIICDCRAKPVKIYQDDKLPFDITFCGSTL 1186
            KPG+EPYLGLHYPATDIPQA+RFLFMKNKVR+I DC AK VK+ QD+KLPFD+T CGSTL
Sbjct: 258  KPGMEPYLGLHYPATDIPQASRFLFMKNKVRMIVDCHAKHVKVLQDEKLPFDLTLCGSTL 317

Query: 1187 RAPHSCHLQYMENMNSIASLVMAVAVNESGENEDAETEQQQQKRKRLWGLVVCHNESPRF 1366
            RAPHSCHLQYMENMNSIASLVMAV VN+  E+ D       QKRKRLWGLVVCHN SPRF
Sbjct: 318  RAPHSCHLQYMENMNSIASLVMAVVVNDGDEDGDTPDSANPQKRKRLWGLVVCHNTSPRF 377

Query: 1367 VPFPL 1381
            VPFPL
Sbjct: 378  VPFPL 382


>gb|AEA50880.1| phyA [Populus tremula]
          Length = 958

 Score =  590 bits (1521), Expect = e-166
 Identities = 286/365 (78%), Positives = 321/365 (87%), Gaps = 2/365 (0%)
 Frame = +2

Query: 293  HSARIVAQTTVDAKLDAEFEEYGGSFDYSQSVSALRETPGEER-RSEKVT-AYLQHIQKG 466
            HSARI+AQTTVDAKL A+FEE G SFDYS SV       G++  RS+KVT AYL HIQKG
Sbjct: 18   HSARIIAQTTVDAKLHADFEESGSSFDYSSSVRVTDSVGGDQPPRSDKVTTAYLHHIQKG 77

Query: 467  KLIQPFGCVLALDEKAFKVIAYSENAPEMLTMVSHTVPSVGDHPTLGIGTDVRSLFTSPS 646
            KLIQPFGC+LALDEK F+V+AYSENAPE+LTMVSH VPSVG+HP LGIGTD+R++FT+PS
Sbjct: 78   KLIQPFGCLLALDEKTFRVVAYSENAPELLTMVSHAVPSVGEHPVLGIGTDIRTIFTAPS 137

Query: 647  TAALQKALGFVEVSLLNPILVHCKTSGKPFYAIVHRVTGCLIIDFEPVKPSEVPMTAAGA 826
             +ALQKA+GF +VSLLNPILVHCKTSGKPFYAIVHRVTG LIIDFEPVKP EVPMTAAGA
Sbjct: 138  ASALQKAMGFGDVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGA 197

Query: 827  LQSYKLAAKAIAKLQSLPGGNMQRLCNTVIEEVFDLTGYDRVMVYKFHDDDHGEVFAEIT 1006
            LQSYKLAAKAI +LQSLP G+M+RLC+T+++EVF+LTGYDR M YKFHDDDHGEV +E+T
Sbjct: 198  LQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRAMAYKFHDDDHGEVVSEVT 257

Query: 1007 KPGLEPYLGLHYPATDIPQAARFLFMKNKVRIICDCRAKPVKIYQDDKLPFDITFCGSTL 1186
            KPG+EPYLGLHYPATDIPQA+RFLFMKNKVR+I DC AK VK+ QD+KLPFD+T CGSTL
Sbjct: 258  KPGMEPYLGLHYPATDIPQASRFLFMKNKVRMIVDCHAKHVKVLQDEKLPFDLTLCGSTL 317

Query: 1187 RAPHSCHLQYMENMNSIASLVMAVAVNESGENEDAETEQQQQKRKRLWGLVVCHNESPRF 1366
            RAPHSCHLQYMENMNSIASLVMAV VN+  E+ D       QKRKRLWGLVVCHN SPRF
Sbjct: 318  RAPHSCHLQYMENMNSIASLVMAVVVNDGDEDGDTPDSANPQKRKRLWGLVVCHNTSPRF 377

Query: 1367 VPFPL 1381
            VPFPL
Sbjct: 378  VPFPL 382


>ref|XP_002278610.1| PREDICTED: phytochrome A1 [Vitis vinifera]
            gi|147838424|emb|CAN76586.1| hypothetical protein
            VITISV_020287 [Vitis vinifera]
            gi|183239014|gb|ACC60965.1| phytochrome A [Vitis
            vinifera] gi|296089871|emb|CBI39690.3| unnamed protein
            product [Vitis vinifera]
          Length = 1124

 Score =  590 bits (1521), Expect = e-166
 Identities = 287/364 (78%), Positives = 321/364 (88%), Gaps = 1/364 (0%)
 Frame = +2

Query: 293  HSARIVAQTTVDAKLDAEFEEYGGSFDYSQSVSALRETPGEERRSEKVT-AYLQHIQKGK 469
            HSARI+AQTTVDAKL A+FEE G SFDYS SV        ++ RS+KVT AYL HIQKGK
Sbjct: 18   HSARIIAQTTVDAKLHADFEESGSSFDYSSSVRFTPAGGDQQPRSDKVTTAYLHHIQKGK 77

Query: 470  LIQPFGCVLALDEKAFKVIAYSENAPEMLTMVSHTVPSVGDHPTLGIGTDVRSLFTSPST 649
            LIQPFG +LALDEK FKVIAYSENAPEMLTMVSH VPSVG+HP LGIGTDVR++F+ PS 
Sbjct: 78   LIQPFGSLLALDEKTFKVIAYSENAPEMLTMVSHAVPSVGEHPVLGIGTDVRTIFSGPSA 137

Query: 650  AALQKALGFVEVSLLNPILVHCKTSGKPFYAIVHRVTGCLIIDFEPVKPSEVPMTAAGAL 829
            +AL KALGF EVSLLNPILVHCKTSGKPFYAI+HRVTG LIIDFEPVKP EVPMTAAGAL
Sbjct: 138  SALHKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLIIDFEPVKPYEVPMTAAGAL 197

Query: 830  QSYKLAAKAIAKLQSLPGGNMQRLCNTVIEEVFDLTGYDRVMVYKFHDDDHGEVFAEITK 1009
            QSYKLAAKAI +LQSLP G+++RLC+T+++EVF+LTGYDRVM YKFHDDDHGEV +EITK
Sbjct: 198  QSYKLAAKAITRLQSLPSGSLERLCDTMVQEVFELTGYDRVMAYKFHDDDHGEVVSEITK 257

Query: 1010 PGLEPYLGLHYPATDIPQAARFLFMKNKVRIICDCRAKPVKIYQDDKLPFDITFCGSTLR 1189
            PGLEPYLGLHYPATDIPQAARFLFMKNKVR+ICDCRAK +++ QD+KLPFD+T CGSTLR
Sbjct: 258  PGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHIQVLQDEKLPFDLTLCGSTLR 317

Query: 1190 APHSCHLQYMENMNSIASLVMAVAVNESGENEDAETEQQQQKRKRLWGLVVCHNESPRFV 1369
            APHSCH+QYMENMNSIASLVMAV VN+  E  ++    Q QKRKRLWGLVVCH+ +PRFV
Sbjct: 318  APHSCHVQYMENMNSIASLVMAVVVNDGDEEGESSNSGQPQKRKRLWGLVVCHHTTPRFV 377

Query: 1370 PFPL 1381
            PFPL
Sbjct: 378  PFPL 381


>gb|AGT50255.1| phytochrome A3 [Ipomoea batatas]
          Length = 1127

 Score =  590 bits (1520), Expect = e-166
 Identities = 288/365 (78%), Positives = 322/365 (88%), Gaps = 2/365 (0%)
 Frame = +2

Query: 293  HSARIVAQTTVDAKLDAEFEEYGGSFDYSQSVSALRETPGEER-RSEKVT-AYLQHIQKG 466
            HSARI+AQT++DAKL AEFEE G SFDYS SV       G ++ RS+KVT AYL  IQK 
Sbjct: 18   HSARIIAQTSIDAKLHAEFEESGDSFDYSSSVRVTSVDAGVQKPRSDKVTTAYLHQIQKA 77

Query: 467  KLIQPFGCVLALDEKAFKVIAYSENAPEMLTMVSHTVPSVGDHPTLGIGTDVRSLFTSPS 646
            K IQPFGC+LALDEK FKVIA+SENAPEMLTMVSH VPSVGDHP LGIGTD+R++FTSPS
Sbjct: 78   KYIQPFGCLLALDEKTFKVIAFSENAPEMLTMVSHAVPSVGDHPVLGIGTDIRTIFTSPS 137

Query: 647  TAALQKALGFVEVSLLNPILVHCKTSGKPFYAIVHRVTGCLIIDFEPVKPSEVPMTAAGA 826
             AALQKALGF EVSLLNPILVHCKTSGKPFYAI+HRVTG LI+DFEPVKP EVPMTAAGA
Sbjct: 138  AAALQKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLIVDFEPVKPYEVPMTAAGA 197

Query: 827  LQSYKLAAKAIAKLQSLPGGNMQRLCNTVIEEVFDLTGYDRVMVYKFHDDDHGEVFAEIT 1006
            LQSYKLAAKAIA+LQSLP G+M+RLC+T+++EVF+LTGYDRVM+YKFHDDDHGEV +EIT
Sbjct: 198  LQSYKLAAKAIARLQSLPSGSMERLCDTMVQEVFELTGYDRVMIYKFHDDDHGEVVSEIT 257

Query: 1007 KPGLEPYLGLHYPATDIPQAARFLFMKNKVRIICDCRAKPVKIYQDDKLPFDITFCGSTL 1186
            KPGLEPYLGLHYPATDIPQAARFLFMKNKVR+ICDCRAK V++ QD+KL  D+T CGSTL
Sbjct: 258  KPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVRVVQDEKLSIDLTLCGSTL 317

Query: 1187 RAPHSCHLQYMENMNSIASLVMAVAVNESGENEDAETEQQQQKRKRLWGLVVCHNESPRF 1366
            RAPHSCHLQYMENMNSIASLVMAV VN+  +  +A    + QKRKRLWGL+VCHN +PRF
Sbjct: 318  RAPHSCHLQYMENMNSIASLVMAVVVNDGDDEGEASESGRIQKRKRLWGLIVCHNTTPRF 377

Query: 1367 VPFPL 1381
            VPFPL
Sbjct: 378  VPFPL 382


>gb|AGT50254.1| phytochrome A2 [Ipomoea batatas]
          Length = 1127

 Score =  590 bits (1520), Expect = e-166
 Identities = 288/365 (78%), Positives = 322/365 (88%), Gaps = 2/365 (0%)
 Frame = +2

Query: 293  HSARIVAQTTVDAKLDAEFEEYGGSFDYSQSVSALRETPGEER-RSEKVT-AYLQHIQKG 466
            HSARI+AQT++DAKL AEFEE G SFDYS SV       G ++ RS+KVT AYL  IQK 
Sbjct: 18   HSARIIAQTSIDAKLHAEFEESGDSFDYSSSVRVTSVDAGVQKPRSDKVTTAYLHQIQKA 77

Query: 467  KLIQPFGCVLALDEKAFKVIAYSENAPEMLTMVSHTVPSVGDHPTLGIGTDVRSLFTSPS 646
            K IQPFGC+LALDEK FKVIA+SENAPEMLTMVSH VPSVGDHP LGIGTD+R++FTSPS
Sbjct: 78   KYIQPFGCLLALDEKTFKVIAFSENAPEMLTMVSHAVPSVGDHPVLGIGTDIRTIFTSPS 137

Query: 647  TAALQKALGFVEVSLLNPILVHCKTSGKPFYAIVHRVTGCLIIDFEPVKPSEVPMTAAGA 826
             AALQKALGF EVSLLNPILVHCKTSGKPFYAI+HRVTG LI+DFEPVKP EVPMTAAGA
Sbjct: 138  AAALQKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLIVDFEPVKPYEVPMTAAGA 197

Query: 827  LQSYKLAAKAIAKLQSLPGGNMQRLCNTVIEEVFDLTGYDRVMVYKFHDDDHGEVFAEIT 1006
            LQSYKLAAKAIA+LQSLP G+M+RLC+T+++EVF+LTGYDRVM+YKFHDDDHGEV +EIT
Sbjct: 198  LQSYKLAAKAIARLQSLPSGSMERLCDTMVQEVFELTGYDRVMIYKFHDDDHGEVVSEIT 257

Query: 1007 KPGLEPYLGLHYPATDIPQAARFLFMKNKVRIICDCRAKPVKIYQDDKLPFDITFCGSTL 1186
            KPGLEPYLGLHYPATDIPQAARFLFMKNKVR+ICDCRAK V++ QD+KL  D+T CGSTL
Sbjct: 258  KPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVRVVQDEKLSIDLTLCGSTL 317

Query: 1187 RAPHSCHLQYMENMNSIASLVMAVAVNESGENEDAETEQQQQKRKRLWGLVVCHNESPRF 1366
            RAPHSCHLQYMENMNSIASLVMAV VN+  +  +A    + QKRKRLWGL+VCHN +PRF
Sbjct: 318  RAPHSCHLQYMENMNSIASLVMAVVVNDGDDEGEASESGRIQKRKRLWGLIVCHNTTPRF 377

Query: 1367 VPFPL 1381
            VPFPL
Sbjct: 378  VPFPL 382


>emb|CDG41614.1| Phytochrome A [Rhazya stricta]
          Length = 960

 Score =  590 bits (1520), Expect = e-166
 Identities = 285/365 (78%), Positives = 323/365 (88%), Gaps = 2/365 (0%)
 Frame = +2

Query: 293  HSARIVAQTTVDAKLDAEFEEYGGSFDYSQSVSALRETPGEER-RSEKVTA-YLQHIQKG 466
            HSAR++AQT++DAKL+A+FEE G SFDYS SV   R T GE++ RS++VT  YL  IQKG
Sbjct: 18   HSARVIAQTSIDAKLNADFEESGSSFDYSSSV---RVTIGEQKPRSDRVTTTYLHQIQKG 74

Query: 467  KLIQPFGCVLALDEKAFKVIAYSENAPEMLTMVSHTVPSVGDHPTLGIGTDVRSLFTSPS 646
            K IQPFGC+LALDEK F+VIAYSENAPEMLTMVSH VPSVGD+P LGIGTD+R++FT PS
Sbjct: 75   KFIQPFGCLLALDEKTFRVIAYSENAPEMLTMVSHAVPSVGDYPALGIGTDIRTIFTGPS 134

Query: 647  TAALQKALGFVEVSLLNPILVHCKTSGKPFYAIVHRVTGCLIIDFEPVKPSEVPMTAAGA 826
             AAL KA+GF EVSLLNPILVHCKTSGKPFYAIVHRVTG LI+DFEPVKP EVPMTAAGA
Sbjct: 135  AAALHKAMGFGEVSLLNPILVHCKTSGKPFYAIVHRVTGSLIVDFEPVKPYEVPMTAAGA 194

Query: 827  LQSYKLAAKAIAKLQSLPGGNMQRLCNTVIEEVFDLTGYDRVMVYKFHDDDHGEVFAEIT 1006
            LQSYKLAAKAI +LQSLP G+++RLC+T+++EVF+LTGYDRVM YKFHDDDHGEV +EIT
Sbjct: 195  LQSYKLAAKAITRLQSLPSGSLERLCDTMVQEVFELTGYDRVMTYKFHDDDHGEVISEIT 254

Query: 1007 KPGLEPYLGLHYPATDIPQAARFLFMKNKVRIICDCRAKPVKIYQDDKLPFDITFCGSTL 1186
            KPGLEPYLGLHYPATDIPQAARFLFMKNKVR+ICDCRAK V++ QD+KLPFD+T CGSTL
Sbjct: 255  KPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVRVVQDEKLPFDLTLCGSTL 314

Query: 1187 RAPHSCHLQYMENMNSIASLVMAVAVNESGENEDAETEQQQQKRKRLWGLVVCHNESPRF 1366
            RAPHSCHLQYMENMNSIASLVMA+ +N+  +  D     Q QKRKRLWGLVVCHN +PRF
Sbjct: 315  RAPHSCHLQYMENMNSIASLVMAIVINDGDDEGDTSDSAQPQKRKRLWGLVVCHNTTPRF 374

Query: 1367 VPFPL 1381
            VPFPL
Sbjct: 375  VPFPL 379


>ref|XP_002318913.1| phytochrome A family protein [Populus trichocarpa]
            gi|222857289|gb|EEE94836.1| phytochrome A family protein
            [Populus trichocarpa]
          Length = 1126

 Score =  589 bits (1519), Expect = e-166
 Identities = 286/365 (78%), Positives = 320/365 (87%), Gaps = 2/365 (0%)
 Frame = +2

Query: 293  HSARIVAQTTVDAKLDAEFEEYGGSFDYSQSVSALRETPGEER-RSEKVTA-YLQHIQKG 466
            HSARI+AQTTVDAKL A+FEE G SFDYS SV       G++  RS+KVT  YL HIQKG
Sbjct: 18   HSARIIAQTTVDAKLHADFEESGSSFDYSSSVRVTDSVGGDQPPRSDKVTTTYLHHIQKG 77

Query: 467  KLIQPFGCVLALDEKAFKVIAYSENAPEMLTMVSHTVPSVGDHPTLGIGTDVRSLFTSPS 646
            KLIQPFGC+LALDEK FKV+AYSENAPE+LTMVSH VPSVG+HP LGIGTD+R++FT+PS
Sbjct: 78   KLIQPFGCLLALDEKTFKVVAYSENAPELLTMVSHAVPSVGEHPVLGIGTDIRTIFTAPS 137

Query: 647  TAALQKALGFVEVSLLNPILVHCKTSGKPFYAIVHRVTGCLIIDFEPVKPSEVPMTAAGA 826
             +ALQKA+GF +VSLLNPILVHCKTSGKPFYAIVHRVTG LIIDFEPVKP EVPMTAAGA
Sbjct: 138  ASALQKAMGFGDVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGA 197

Query: 827  LQSYKLAAKAIAKLQSLPGGNMQRLCNTVIEEVFDLTGYDRVMVYKFHDDDHGEVFAEIT 1006
            LQSYKLAAKAI +LQSLP G+M+RLC+T+++EVF+LTGYDR M YKFHDDDHGEV +E+T
Sbjct: 198  LQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRAMAYKFHDDDHGEVVSEVT 257

Query: 1007 KPGLEPYLGLHYPATDIPQAARFLFMKNKVRIICDCRAKPVKIYQDDKLPFDITFCGSTL 1186
            KPG+EPYLGLHYPATDIPQA+RFLFMKNKVR+I DC AK VK+ QD+KLPFD+T CGSTL
Sbjct: 258  KPGMEPYLGLHYPATDIPQASRFLFMKNKVRMIVDCHAKHVKVLQDEKLPFDLTLCGSTL 317

Query: 1187 RAPHSCHLQYMENMNSIASLVMAVAVNESGENEDAETEQQQQKRKRLWGLVVCHNESPRF 1366
            RAPHSCHLQYMENMNSIASLVMAV VN+  E+ D       QKRKRLWGLVVCHN SPRF
Sbjct: 318  RAPHSCHLQYMENMNSIASLVMAVVVNDGDEDGDTPDSVNPQKRKRLWGLVVCHNTSPRF 377

Query: 1367 VPFPL 1381
            VPFPL
Sbjct: 378  VPFPL 382


>gb|ACC60969.1| phytochrome A [Vitis riparia]
          Length = 1124

 Score =  589 bits (1518), Expect = e-165
 Identities = 286/364 (78%), Positives = 321/364 (88%), Gaps = 1/364 (0%)
 Frame = +2

Query: 293  HSARIVAQTTVDAKLDAEFEEYGGSFDYSQSVSALRETPGEERRSEKVT-AYLQHIQKGK 469
            HSARI+AQTTVDAKL A+FEE G SFDYS SV        ++ RS+KVT AYL HIQKGK
Sbjct: 18   HSARIIAQTTVDAKLHADFEESGSSFDYSSSVRFTPAGGDQQPRSDKVTTAYLHHIQKGK 77

Query: 470  LIQPFGCVLALDEKAFKVIAYSENAPEMLTMVSHTVPSVGDHPTLGIGTDVRSLFTSPST 649
            LIQPFG +LALD+K FKVIAYSENAPEMLTMVSH VPSVG+HP LGIGTDVR++F+ PS 
Sbjct: 78   LIQPFGSLLALDDKTFKVIAYSENAPEMLTMVSHAVPSVGEHPVLGIGTDVRTIFSGPSA 137

Query: 650  AALQKALGFVEVSLLNPILVHCKTSGKPFYAIVHRVTGCLIIDFEPVKPSEVPMTAAGAL 829
            +AL KALGF EVSLLNPILVHCKTSGKPFYAI+HRVTG LIIDFEPVKP EVPMTAAGAL
Sbjct: 138  SALHKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLIIDFEPVKPYEVPMTAAGAL 197

Query: 830  QSYKLAAKAIAKLQSLPGGNMQRLCNTVIEEVFDLTGYDRVMVYKFHDDDHGEVFAEITK 1009
            QSYKLAAKAI +LQSLP G+++RLC+T+++EVF+LTGYDRVM YKFHDDDHGEV +EITK
Sbjct: 198  QSYKLAAKAITRLQSLPSGSLERLCDTMVQEVFELTGYDRVMAYKFHDDDHGEVVSEITK 257

Query: 1010 PGLEPYLGLHYPATDIPQAARFLFMKNKVRIICDCRAKPVKIYQDDKLPFDITFCGSTLR 1189
            PGLEPYLGLHYPATDIPQAARFLFMKNKVR+ICDCRAK +++ QD+KLPFD+T CGSTLR
Sbjct: 258  PGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHIQVLQDEKLPFDLTLCGSTLR 317

Query: 1190 APHSCHLQYMENMNSIASLVMAVAVNESGENEDAETEQQQQKRKRLWGLVVCHNESPRFV 1369
            APHSCH+QYMENMNSIASLVMAV VN+  E  ++    Q QKRKRLWGLVVCH+ +PRFV
Sbjct: 318  APHSCHVQYMENMNSIASLVMAVVVNDGDEEGESSNSGQPQKRKRLWGLVVCHHTTPRFV 377

Query: 1370 PFPL 1381
            PFPL
Sbjct: 378  PFPL 381


>gb|EOY11803.1| Phytochrome A [Theobroma cacao]
          Length = 1121

 Score =  588 bits (1516), Expect = e-165
 Identities = 290/365 (79%), Positives = 323/365 (88%), Gaps = 2/365 (0%)
 Frame = +2

Query: 293  HSARIVAQTTVDAKLDAEFEEYGGSFDYSQSVSALRETPGEERRSEKVT-AYLQHIQKGK 469
            HSARI+AQTTVDAKL A FEE G SFDYS SV   R +  ++ RS++VT AYL  IQKGK
Sbjct: 18   HSARIIAQTTVDAKLHANFEESGSSFDYSSSV---RVSGDQQPRSDRVTTAYLHQIQKGK 74

Query: 470  LIQPFGCVLALDEKAFKVIAYSENAPEMLTMVSHTVPSVGDHPTLGIGTDVRSLFTSPST 649
             IQPFGC+LALDEK +KVIAYSENAPEMLTMVSH VPSVGDHP LGIGTD++++FT+PS+
Sbjct: 75   FIQPFGCLLALDEKTYKVIAYSENAPEMLTMVSHAVPSVGDHPVLGIGTDIKTIFTAPSS 134

Query: 650  AALQKALGFVEVSLLNPILVHCKTSGKPFYAIVHRVTGCLIIDFEPVKPSEVPMTAAGAL 829
            +AL KALG  EVSLLNPILVHCKTSGKPFYAI+HRVTG LIIDFEPVKP EVPMTAAGAL
Sbjct: 135  SALLKALGIGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLIIDFEPVKPYEVPMTAAGAL 194

Query: 830  QSYKLAAKAIAKLQSLPGGNMQRLCNTVIEEVFDLTGYDRVMVYKFHDDDHGEVFAEITK 1009
            QSYKLAAKAI +LQSLP G+M+RLC+T+++EVF+LTGYDRVM YKFHDDDHGEV +EITK
Sbjct: 195  QSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAYKFHDDDHGEVVSEITK 254

Query: 1010 PGLEPYLGLHYPATDIPQAARFLFMKNKVRIICDCRAKPVKIYQDDKLPFDITFCGSTLR 1189
            PGLEPYLGLHYPATDIPQAARFLFMKNKVR+I DC AK VK++QDDKLPFD+T CGSTLR
Sbjct: 255  PGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCHAKHVKVFQDDKLPFDLTLCGSTLR 314

Query: 1190 APHSCHLQYMENMNSIASLVMAVAVNESGENEDA-ETEQQQQKRKRLWGLVVCHNESPRF 1366
            APHSCHLQYMENMNSIASLVMAV VN+  E  D  ++ Q QQKRKRLWGLVVCHN +PRF
Sbjct: 315  APHSCHLQYMENMNSIASLVMAVIVNDGDEEGDGPDSAQPQQKRKRLWGLVVCHNTTPRF 374

Query: 1367 VPFPL 1381
            VPFPL
Sbjct: 375  VPFPL 379


>ref|XP_004302312.1| PREDICTED: phytochrome A-like [Fragaria vesca subsp. vesca]
          Length = 1124

 Score =  588 bits (1516), Expect = e-165
 Identities = 287/365 (78%), Positives = 320/365 (87%), Gaps = 2/365 (0%)
 Frame = +2

Query: 293  HSARIVAQTTVDAKLDAEFEEYGGSFDYSQSVSALRETPGEER-RSEKVT-AYLQHIQKG 466
            HSAR++AQTTVDAKL A FEE G SFDYS SV    E  G+++ RS+KVT AYL HIQKG
Sbjct: 18   HSARVIAQTTVDAKLHANFEESGSSFDYSNSVRVSSEVTGDQQPRSDKVTTAYLHHIQKG 77

Query: 467  KLIQPFGCVLALDEKAFKVIAYSENAPEMLTMVSHTVPSVGDHPTLGIGTDVRSLFTSPS 646
            KLIQPFGC+LALD+K F+VIAYSENAPEMLTMVSH VPSVGDHP LGIGTDVR++FT PS
Sbjct: 78   KLIQPFGCLLALDDKTFRVIAYSENAPEMLTMVSHAVPSVGDHPVLGIGTDVRTIFTGPS 137

Query: 647  TAALQKALGFVEVSLLNPILVHCKTSGKPFYAIVHRVTGCLIIDFEPVKPSEVPMTAAGA 826
             +AL KALGF EVSLLNPILVHCK+SGKPFYAIVHRVTG L+IDFEPVKP EVPMTAAGA
Sbjct: 138  ASALHKALGFGEVSLLNPILVHCKSSGKPFYAIVHRVTGSLVIDFEPVKPYEVPMTAAGA 197

Query: 827  LQSYKLAAKAIAKLQSLPGGNMQRLCNTVIEEVFDLTGYDRVMVYKFHDDDHGEVFAEIT 1006
            LQSYKLAAKAIA+LQSLP G+++RLC+T+++EVF+LTGYDRVM YKFHDDDHGEV AE+T
Sbjct: 198  LQSYKLAAKAIARLQSLPSGSLERLCDTMVQEVFELTGYDRVMAYKFHDDDHGEVVAELT 257

Query: 1007 KPGLEPYLGLHYPATDIPQAARFLFMKNKVRIICDCRAKPVKIYQDDKLPFDITFCGSTL 1186
            KPGLEPYLGLHYP+TDIPQA+RFLFMKNKVR+I DC AK VK+ QD+KLP D+T CGSTL
Sbjct: 258  KPGLEPYLGLHYPSTDIPQASRFLFMKNKVRMIVDCCAKNVKVLQDEKLPLDLTLCGSTL 317

Query: 1187 RAPHSCHLQYMENMNSIASLVMAVAVNESGENEDAETEQQQQKRKRLWGLVVCHNESPRF 1366
            RAPHSCHLQYMENMNSIASLVMAV +NE  +        Q QKRKRLWGLVVCHN +PRF
Sbjct: 318  RAPHSCHLQYMENMNSIASLVMAVVINEGDDEVAGPDSAQTQKRKRLWGLVVCHNTTPRF 377

Query: 1367 VPFPL 1381
            VPFPL
Sbjct: 378  VPFPL 382


>gb|AAP06787.1| phytochrome A1 apoprotein [Zea mays] gi|414872502|tpg|DAA51059.1|
            TPA: phytochromeA1 [Zea mays]
          Length = 1131

 Score =  587 bits (1514), Expect = e-165
 Identities = 285/364 (78%), Positives = 327/364 (89%), Gaps = 3/364 (0%)
 Frame = +2

Query: 299  ARIVAQTTVDAKLDAEFEEYGGSFDYSQSVSALRETPGEER-RSEKVTAYLQHIQKGKLI 475
            ARI+AQTT+DA+L+AE+EE G SFDYS+ V A R TP E++ RS KV AYLQHIQ+GKLI
Sbjct: 22   ARILAQTTLDAELNAEYEESGDSFDYSKLVEAQRSTPPEQQGRSGKVIAYLQHIQRGKLI 81

Query: 476  QPFGCVLALDEKAFKVIAYSENAPEMLTMVSHTVPSVGDHPTLGIGTDVRSLFTSPSTAA 655
            QPFGC+LALDEK+F+VIA+SENAPEMLT VSH VP+V D P LGIGT+VRSLFT P   A
Sbjct: 82   QPFGCLLALDEKSFRVIAFSENAPEMLTTVSHAVPNVDDPPKLGIGTNVRSLFTDPGATA 141

Query: 656  LQKALGFVEVSLLNPILVHCKTSGKPFYAIVHRVTGCLIIDFEPVKPSEVPMTAAGALQS 835
            LQKALGF +VSLLNPILV CKTSGKPFYAIVHR TGCL++DFEPVKP+E P TAAGALQS
Sbjct: 142  LQKALGFADVSLLNPILVQCKTSGKPFYAIVHRATGCLVVDFEPVKPTEFPATAAGALQS 201

Query: 836  YKLAAKAIAKLQSLPGGNMQRLCNTVIEEVFDLTGYDRVMVYKFHDDDHGEVFAEITKPG 1015
            YKLAAKAI+K+QSLPGG+MQ LCNTV++EVFDLTGYDRVM YKFH+D+HGEVFAEITKPG
Sbjct: 202  YKLAAKAISKIQSLPGGSMQALCNTVVKEVFDLTGYDRVMAYKFHEDEHGEVFAEITKPG 261

Query: 1016 LEPYLGLHYPATDIPQAARFLFMKNKVRIICDCRAKPVKIYQDDKLPFDITFCGSTLRAP 1195
            +EPYLGLHYPATDIPQAARFLFMKNKVR+ICDCRA+ VKI +D+ L  DI+ CGSTLRAP
Sbjct: 262  IEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRARSVKIIEDEALSIDISLCGSTLRAP 321

Query: 1196 HSCHLQYMENMNSIASLVMAVAVNESGENEDAETEQ--QQQKRKRLWGLVVCHNESPRFV 1369
            HSCHLQYMENMNSIASLVMAV VNE+ ++++ E+EQ  QQQKRK+LWGL+VCH+ESPR+V
Sbjct: 322  HSCHLQYMENMNSIASLVMAVVVNENEDDDEPESEQPPQQQKRKKLWGLIVCHHESPRYV 381

Query: 1370 PFPL 1381
            PFPL
Sbjct: 382  PFPL 385


>ref|NP_001234490.1| alternative transcript type 3 [Solanum lycopersicum]
            gi|3492795|emb|CAA05086.1| phyA [Solanum lycopersicum]
            gi|3492797|emb|CAA05087.1| phyA [Solanum lycopersicum]
            gi|3492799|emb|CAA05088.1| phyA [Solanum lycopersicum]
            gi|3492801|emb|CAA05089.1| phyA [Solanum lycopersicum]
          Length = 1123

 Score =  586 bits (1510), Expect = e-165
 Identities = 287/365 (78%), Positives = 319/365 (87%), Gaps = 2/365 (0%)
 Frame = +2

Query: 293  HSARIVAQTTVDAKLDAEFEEYGGSFDYSQSVSALRETPGEER-RSEKVT-AYLQHIQKG 466
            HSARIVAQT++DAKL A+FEE G SFDYS SV        EE+ +S+KVT AYL  IQKG
Sbjct: 18   HSARIVAQTSIDAKLHADFEESGDSFDYSSSVRVTSVAGDEEKPKSDKVTTAYLHQIQKG 77

Query: 467  KLIQPFGCVLALDEKAFKVIAYSENAPEMLTMVSHTVPSVGDHPTLGIGTDVRSLFTSPS 646
            K IQPFGC+LALDEK  KVIA+SENAPEMLTMVSH VPSVG+HP LGIGTD+R++FT PS
Sbjct: 78   KFIQPFGCLLALDEKTLKVIAFSENAPEMLTMVSHAVPSVGEHPVLGIGTDIRTIFTGPS 137

Query: 647  TAALQKALGFVEVSLLNPILVHCKTSGKPFYAIVHRVTGCLIIDFEPVKPSEVPMTAAGA 826
             AALQKALGF EVSLLNP+LVHCK SGKPFYAIVHRVTG LI+DFEPVKP EVPMTAAGA
Sbjct: 138  GAALQKALGFGEVSLLNPVLVHCKNSGKPFYAIVHRVTGSLILDFEPVKPYEVPMTAAGA 197

Query: 827  LQSYKLAAKAIAKLQSLPGGNMQRLCNTVIEEVFDLTGYDRVMVYKFHDDDHGEVFAEIT 1006
            LQSYKLAAKAI +LQSLP G+M+RLC+T+++EVF+LTGYDRVM YKFH+DDHGEV +EIT
Sbjct: 198  LQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMGYKFHEDDHGEVVSEIT 257

Query: 1007 KPGLEPYLGLHYPATDIPQAARFLFMKNKVRIICDCRAKPVKIYQDDKLPFDITFCGSTL 1186
            KPGLEPYLGLHYPATDIPQAARFLFMKNKVR+ICDCRAK VK+ QD+KLPFD+T CGSTL
Sbjct: 258  KPGLEPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVKVVQDEKLPFDLTLCGSTL 317

Query: 1187 RAPHSCHLQYMENMNSIASLVMAVAVNESGENEDAETEQQQQKRKRLWGLVVCHNESPRF 1366
            RAPH CHLQYMENMNSIASLVMAV VN+  E  ++    Q QKRKRLWGLVVCHN +PRF
Sbjct: 318  RAPHYCHLQYMENMNSIASLVMAVVVNDGDEEGESSDSSQSQKRKRLWGLVVCHNTTPRF 377

Query: 1367 VPFPL 1381
            VPFPL
Sbjct: 378  VPFPL 382


>sp|P33530.1|PHYA1_TOBAC RecName: Full=Phytochrome A1 gi|297478|emb|CAA47284.1| type-A
            phytochrome [Nicotiana tabacum]
          Length = 1124

 Score =  585 bits (1508), Expect = e-164
 Identities = 287/366 (78%), Positives = 322/366 (87%), Gaps = 3/366 (0%)
 Frame = +2

Query: 293  HSARIVAQTTVDAKLDAEFEEYGGSFDYSQSVSALRETPGEERR--SEKVT-AYLQHIQK 463
            HSARI+AQTT+DAKL A+FEE G SFDYS SV  +    G+ER+  S++VT AYL  IQK
Sbjct: 18   HSARIIAQTTIDAKLHADFEESGDSFDYSSSVR-VTSVAGDERKPKSDRVTTAYLNQIQK 76

Query: 464  GKLIQPFGCVLALDEKAFKVIAYSENAPEMLTMVSHTVPSVGDHPTLGIGTDVRSLFTSP 643
            GK IQPFGC+LALDEK FKVIA+SENAPEMLTMVSH VPSVG+ P LGIGTD+R++FT P
Sbjct: 77   GKFIQPFGCLLALDEKTFKVIAFSENAPEMLTMVSHAVPSVGELPALGIGTDIRTIFTGP 136

Query: 644  STAALQKALGFVEVSLLNPILVHCKTSGKPFYAIVHRVTGCLIIDFEPVKPSEVPMTAAG 823
            S AALQKALGF EVSLLNP+LVHCKTSGKP+YAIVHRVTG LIIDFEPVKP EVPMTAAG
Sbjct: 137  SAAALQKALGFGEVSLLNPVLVHCKTSGKPYYAIVHRVTGSLIIDFEPVKPYEVPMTAAG 196

Query: 824  ALQSYKLAAKAIAKLQSLPGGNMQRLCNTVIEEVFDLTGYDRVMVYKFHDDDHGEVFAEI 1003
            ALQSYKLAAKAI +LQ+LP G+M+RLC+T+++EVF+LTGYDRVM YKFHDDDHGEV AEI
Sbjct: 197  ALQSYKLAAKAITRLQALPSGSMERLCDTMVQEVFELTGYDRVMTYKFHDDDHGEVVAEI 256

Query: 1004 TKPGLEPYLGLHYPATDIPQAARFLFMKNKVRIICDCRAKPVKIYQDDKLPFDITFCGST 1183
            TKPGL+PYLGLHYPATDIPQAARFLFMKNKVR+ICDCRAK VK+ QD+KLPFD+T CGST
Sbjct: 257  TKPGLDPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVKVVQDEKLPFDLTLCGST 316

Query: 1184 LRAPHSCHLQYMENMNSIASLVMAVAVNESGENEDAETEQQQQKRKRLWGLVVCHNESPR 1363
            LRAPH CHLQYMENM+SIASLVMAV VN+  E  ++    Q QKRKRLWGLVVCHN +PR
Sbjct: 317  LRAPHYCHLQYMENMSSIASLVMAVVVNDGDEEGESSDSTQSQKRKRLWGLVVCHNTTPR 376

Query: 1364 FVPFPL 1381
            FVPFPL
Sbjct: 377  FVPFPL 382