BLASTX nr result
ID: Zingiber24_contig00002083
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00002083
(226 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAD27882.2|AF139470_1 chlorophyll a/b-binding protein CP24 pr... 80 3e-13
ref|XP_003531552.1| PREDICTED: chlorophyll a-b binding protein C... 79 5e-13
gb|ACU15016.1| unknown [Glycine max] 79 5e-13
ref|NP_001236415.1| uncharacterized protein LOC100527463 [Glycin... 79 8e-13
gb|AGV54678.1| chlorophyll A/B binding protein CP24 10A chloropl... 78 1e-12
ref|XP_004485563.1| PREDICTED: chlorophyll a-b binding protein C... 74 3e-11
ref|XP_004140973.1| PREDICTED: chlorophyll a-b binding protein C... 73 5e-11
dbj|BAI52949.1| light-harvesting complex II protein [Citrullus l... 68 1e-09
ref|XP_006351799.1| PREDICTED: chlorophyll a-b binding protein C... 67 2e-09
emb|CBI20065.3| unnamed protein product [Vitis vinifera] 67 2e-09
ref|XP_002263201.1| PREDICTED: chlorophyll a-b binding protein C... 67 2e-09
gb|EOX98842.1| Light harvesting complex photosystem II subunit 6... 66 4e-09
gb|AFK41475.1| unknown [Lotus japonicus] 65 1e-08
gb|ABG73416.1| chloroplast pigment-binding protein CP24 [Nicotia... 64 2e-08
ref|XP_003531041.1| PREDICTED: chlorophyll a-b binding protein C... 63 5e-08
gb|ACU23773.1| unknown [Glycine max] 63 5e-08
sp|P36494.1|CB4_SPIOL RecName: Full=Chlorophyll a-b binding prot... 62 8e-08
ref|XP_003593177.1| Chloroplast chlorophyll a/b-binding protein ... 62 1e-07
gb|EXB97263.1| Chlorophyll a-b binding protein CP24 10A [Morus n... 61 2e-07
ref|XP_006494019.1| PREDICTED: chlorophyll a-b binding protein C... 60 3e-07
>gb|AAD27882.2|AF139470_1 chlorophyll a/b-binding protein CP24 precursor [Vigna radiata]
Length = 258
Score = 80.1 bits (196), Expect = 3e-13
Identities = 44/62 (70%), Positives = 50/62 (80%), Gaps = 4/62 (6%)
Frame = +2
Query: 53 VLQGLSTPFVSG---SRTLLNATIGGRSS-AVSSRRLIVVAAAAPKKSWLPGVRGGGNLV 220
VL GL + F+SG S+TLL +IGG+ AVS RRLIVVAAAAPKKSW+PGVRGGGNLV
Sbjct: 9 VLNGLGSSFLSGGSRSQTLLATSIGGKVGVAVSPRRLIVVAAAAPKKSWIPGVRGGGNLV 68
Query: 221 DP 226
DP
Sbjct: 69 DP 70
>ref|XP_003531552.1| PREDICTED: chlorophyll a-b binding protein CP24 10A, chloroplastic
[Glycine max]
Length = 261
Score = 79.3 bits (194), Expect = 5e-13
Identities = 45/65 (69%), Positives = 49/65 (75%), Gaps = 7/65 (10%)
Frame = +2
Query: 53 VLQGLSTPFVSG---SRTLLNATIGGRSSA----VSSRRLIVVAAAAPKKSWLPGVRGGG 211
VL GL + F+SG S+TLL IGG+ A VS RRLIVVAAAAPKKSWLPGVRGGG
Sbjct: 9 VLNGLGSSFLSGGNRSQTLLATAIGGKVGAAAVTVSPRRLIVVAAAAPKKSWLPGVRGGG 68
Query: 212 NLVDP 226
NLVDP
Sbjct: 69 NLVDP 73
>gb|ACU15016.1| unknown [Glycine max]
Length = 247
Score = 79.3 bits (194), Expect = 5e-13
Identities = 45/65 (69%), Positives = 49/65 (75%), Gaps = 7/65 (10%)
Frame = +2
Query: 53 VLQGLSTPFVSG---SRTLLNATIGGRSSA----VSSRRLIVVAAAAPKKSWLPGVRGGG 211
VL GL + F+SG S+TLL IGG+ A VS RRLIVVAAAAPKKSWLPGVRGGG
Sbjct: 9 VLNGLGSSFLSGGNRSQTLLATAIGGKVGAAAVTVSPRRLIVVAAAAPKKSWLPGVRGGG 68
Query: 212 NLVDP 226
NLVDP
Sbjct: 69 NLVDP 73
>ref|NP_001236415.1| uncharacterized protein LOC100527463 [Glycine max]
gi|255632410|gb|ACU16555.1| unknown [Glycine max]
Length = 259
Score = 78.6 bits (192), Expect = 8e-13
Identities = 44/64 (68%), Positives = 49/64 (76%), Gaps = 6/64 (9%)
Frame = +2
Query: 53 VLQGLSTPFVSG---SRTLLNATIGGRSSA---VSSRRLIVVAAAAPKKSWLPGVRGGGN 214
VL GL + F+SG S+TLL IGG+ A V+ RRLIVVAAAAPKKSWLPGVRGGGN
Sbjct: 9 VLNGLGSSFLSGGNRSQTLLATAIGGKVGAAVTVNPRRLIVVAAAAPKKSWLPGVRGGGN 68
Query: 215 LVDP 226
LVDP
Sbjct: 69 LVDP 72
>gb|AGV54678.1| chlorophyll A/B binding protein CP24 10A chloroplastic [Phaseolus
vulgaris] gi|561021646|gb|ESW20417.1| hypothetical
protein PHAVU_006G207300g [Phaseolus vulgaris]
Length = 258
Score = 78.2 bits (191), Expect = 1e-12
Identities = 44/62 (70%), Positives = 48/62 (77%), Gaps = 4/62 (6%)
Frame = +2
Query: 53 VLQGLSTPFVSG---SRTLLNATIGGRSS-AVSSRRLIVVAAAAPKKSWLPGVRGGGNLV 220
VL GL + F+SG S+TLL IGG+ AVS RRLIVVAAAAPKKSWLPGVR GGNLV
Sbjct: 9 VLNGLGSSFLSGGSRSQTLLATAIGGKLGVAVSPRRLIVVAAAAPKKSWLPGVRAGGNLV 68
Query: 221 DP 226
DP
Sbjct: 69 DP 70
>ref|XP_004485563.1| PREDICTED: chlorophyll a-b binding protein CP24 10A,
chloroplastic-like [Cicer arietinum]
Length = 260
Score = 73.6 bits (179), Expect = 3e-11
Identities = 41/64 (64%), Positives = 50/64 (78%), Gaps = 6/64 (9%)
Frame = +2
Query: 53 VLQGLSTPFVSG---SRTLLNAT-IGGR--SSAVSSRRLIVVAAAAPKKSWLPGVRGGGN 214
VL GL + F+ G S+TLL AT IGG+ ++AVS RRL+V AAAAPKKSW+PGVRGGGN
Sbjct: 9 VLNGLGSSFLCGGKRSQTLLLATAIGGKVGAAAVSPRRLVVAAAAAPKKSWIPGVRGGGN 68
Query: 215 LVDP 226
+DP
Sbjct: 69 FIDP 72
>ref|XP_004140973.1| PREDICTED: chlorophyll a-b binding protein CP24 10A,
chloroplastic-like [Cucumis sativus]
gi|449497079|ref|XP_004160305.1| PREDICTED: chlorophyll
a-b binding protein CP24 10A, chloroplastic-like
[Cucumis sativus]
Length = 255
Score = 72.8 bits (177), Expect = 5e-11
Identities = 40/61 (65%), Positives = 46/61 (75%), Gaps = 3/61 (4%)
Frame = +2
Query: 53 VLQGLSTPFVSGS---RTLLNATIGGRSSAVSSRRLIVVAAAAPKKSWLPGVRGGGNLVD 223
VL GL +PF+ GS RTLL A G + VSS +L++VAAA PKKSWLPGVRGGGNLVD
Sbjct: 8 VLTGLGSPFLRGSSRTRTLL-AGARGSVNVVSSSKLVIVAAAQPKKSWLPGVRGGGNLVD 66
Query: 224 P 226
P
Sbjct: 67 P 67
>dbj|BAI52949.1| light-harvesting complex II protein [Citrullus lanatus subsp.
vulgaris]
Length = 255
Score = 68.2 bits (165), Expect = 1e-09
Identities = 35/61 (57%), Positives = 45/61 (73%), Gaps = 3/61 (4%)
Frame = +2
Query: 53 VLQGLSTPFVSG---SRTLLNATIGGRSSAVSSRRLIVVAAAAPKKSWLPGVRGGGNLVD 223
VL GL +PF+ G ++TLL GG + V SR+L+VVAAA PKKSW+P V+GGGNL+D
Sbjct: 8 VLNGLGSPFLRGGSRTQTLLAGARGG-VNVVGSRKLVVVAAAQPKKSWIPAVKGGGNLID 66
Query: 224 P 226
P
Sbjct: 67 P 67
>ref|XP_006351799.1| PREDICTED: chlorophyll a-b binding protein CP24 10A,
chloroplastic-like [Solanum tuberosum]
Length = 256
Score = 67.4 bits (163), Expect = 2e-09
Identities = 34/61 (55%), Positives = 43/61 (70%), Gaps = 3/61 (4%)
Frame = +2
Query: 53 VLQGLSTPFVSG---SRTLLNATIGGRSSAVSSRRLIVVAAAAPKKSWLPGVRGGGNLVD 223
VL GLS+ F++G S+ LL A + R ++ + +V AAAPKKSWLPGVRGGGNLVD
Sbjct: 8 VLNGLSSSFLTGGKKSQALLAAPLAARVGGAATPKRFIVVAAAPKKSWLPGVRGGGNLVD 67
Query: 224 P 226
P
Sbjct: 68 P 68
>emb|CBI20065.3| unnamed protein product [Vitis vinifera]
Length = 198
Score = 67.0 bits (162), Expect = 2e-09
Identities = 34/62 (54%), Positives = 48/62 (77%), Gaps = 4/62 (6%)
Frame = +2
Query: 53 VLQGLSTPFVSG---SRTLLNATIGGRS-SAVSSRRLIVVAAAAPKKSWLPGVRGGGNLV 220
VL GL +PF++G S++LL+A + ++ +AV + R ++V AAAPKKSWLPGV+ GGNLV
Sbjct: 8 VLNGLGSPFLTGGKRSQSLLSAGVAAKAGAAVPAPRRLIVVAAAPKKSWLPGVKAGGNLV 67
Query: 221 DP 226
DP
Sbjct: 68 DP 69
>ref|XP_002263201.1| PREDICTED: chlorophyll a-b binding protein CP24 10A, chloroplastic
[Vitis vinifera] gi|147804704|emb|CAN71620.1|
hypothetical protein VITISV_015544 [Vitis vinifera]
Length = 257
Score = 67.0 bits (162), Expect = 2e-09
Identities = 34/62 (54%), Positives = 48/62 (77%), Gaps = 4/62 (6%)
Frame = +2
Query: 53 VLQGLSTPFVSG---SRTLLNATIGGRS-SAVSSRRLIVVAAAAPKKSWLPGVRGGGNLV 220
VL GL +PF++G S++LL+A + ++ +AV + R ++V AAAPKKSWLPGV+ GGNLV
Sbjct: 8 VLNGLGSPFLTGGKRSQSLLSAGVAAKAGAAVPAPRRLIVVAAAPKKSWLPGVKAGGNLV 67
Query: 221 DP 226
DP
Sbjct: 68 DP 69
>gb|EOX98842.1| Light harvesting complex photosystem II subunit 6 [Theobroma cacao]
Length = 254
Score = 66.2 bits (160), Expect = 4e-09
Identities = 33/61 (54%), Positives = 45/61 (73%), Gaps = 3/61 (4%)
Frame = +2
Query: 53 VLQGLSTPFVSG---SRTLLNATIGGRSSAVSSRRLIVVAAAAPKKSWLPGVRGGGNLVD 223
V+ GL +PF+ G S+ LL A + + A +R+L+VVAAAAPKKSW+PGVRGGGN ++
Sbjct: 8 VINGLGSPFLCGGKRSQALLGARVA--TPASGTRKLVVVAAAAPKKSWIPGVRGGGNFIN 65
Query: 224 P 226
P
Sbjct: 66 P 66
>gb|AFK41475.1| unknown [Lotus japonicus]
Length = 260
Score = 64.7 bits (156), Expect = 1e-08
Identities = 37/63 (58%), Positives = 47/63 (74%), Gaps = 5/63 (7%)
Frame = +2
Query: 53 VLQGLSTPFVSG---SRTLLNATIGGRS-SAVSSRRLIVVAAAA-PKKSWLPGVRGGGNL 217
VL GL + F+ G S+TLL + G ++ +AVS +RLIV AAAA PKKSW+P V+GGGNL
Sbjct: 10 VLNGLGSSFLCGGNRSQTLLASAAGAKAGAAVSPKRLIVAAAAAAPKKSWIPAVKGGGNL 69
Query: 218 VDP 226
VDP
Sbjct: 70 VDP 72
>gb|ABG73416.1| chloroplast pigment-binding protein CP24 [Nicotiana tabacum]
Length = 257
Score = 63.9 bits (154), Expect = 2e-08
Identities = 33/62 (53%), Positives = 45/62 (72%), Gaps = 4/62 (6%)
Frame = +2
Query: 53 VLQGLSTPFVSG---SRTLLNATIGGRSSAVSS-RRLIVVAAAAPKKSWLPGVRGGGNLV 220
VL GLS+ F++G S+ LL A + R +++ +R IV AAAAPKKSW+P V+GGGNL+
Sbjct: 8 VLNGLSSSFLTGGKNSQALLGAPVAARIGGLATPKRCIVAAAAAPKKSWIPAVKGGGNLL 67
Query: 221 DP 226
DP
Sbjct: 68 DP 69
>ref|XP_003531041.1| PREDICTED: chlorophyll a-b binding protein CP24 10A,
chloroplastic-like isoform 1 [Glycine max]
Length = 258
Score = 62.8 bits (151), Expect = 5e-08
Identities = 33/62 (53%), Positives = 43/62 (69%), Gaps = 4/62 (6%)
Frame = +2
Query: 53 VLQGLSTPFVSG---SRTLLNATIGGRSSA-VSSRRLIVVAAAAPKKSWLPGVRGGGNLV 220
VL G + F+ G S LL A+IGG+ A VS +R+IV AAAPKKSW+P V+GGG+ +
Sbjct: 9 VLNGFGSHFLCGGKRSHALLAASIGGKVGASVSPKRVIVAVAAAPKKSWIPAVKGGGSFI 68
Query: 221 DP 226
DP
Sbjct: 69 DP 70
>gb|ACU23773.1| unknown [Glycine max]
Length = 258
Score = 62.8 bits (151), Expect = 5e-08
Identities = 33/62 (53%), Positives = 43/62 (69%), Gaps = 4/62 (6%)
Frame = +2
Query: 53 VLQGLSTPFVSG---SRTLLNATIGGRSSA-VSSRRLIVVAAAAPKKSWLPGVRGGGNLV 220
VL G + F+ G S LL A+IGG+ A VS +R+IV AAAPKKSW+P V+GGG+ +
Sbjct: 9 VLNGFGSHFLCGGKRSHALLAASIGGKVGASVSPKRVIVAVAAAPKKSWIPAVKGGGSFI 68
Query: 221 DP 226
DP
Sbjct: 69 DP 70
>sp|P36494.1|CB4_SPIOL RecName: Full=Chlorophyll a-b binding protein CP24, chloroplastic;
Flags: Precursor gi|437991|emb|CAA81105.1| 20 kDa
protein of CP24 precursor protein [Spinacia oleracea]
Length = 261
Score = 62.0 bits (149), Expect = 8e-08
Identities = 30/64 (46%), Positives = 45/64 (70%), Gaps = 6/64 (9%)
Frame = +2
Query: 53 VLQGLSTPFVSG----SRTLL--NATIGGRSSAVSSRRLIVVAAAAPKKSWLPGVRGGGN 214
++ G ++PF+SG S++LL N+ +G S S + ++V AAAAPKKSW+P V+GGGN
Sbjct: 10 IVNGFTSPFLSGGKKSSQSLLFVNSKVGAGVSTTSRKLVVVAAAAAPKKSWIPAVKGGGN 69
Query: 215 LVDP 226
+DP
Sbjct: 70 FLDP 73
>ref|XP_003593177.1| Chloroplast chlorophyll a/b-binding protein CP24 [Medicago
truncatula] gi|355482225|gb|AES63428.1| Chloroplast
chlorophyll a/b-binding protein CP24 [Medicago
truncatula]
Length = 261
Score = 61.6 bits (148), Expect = 1e-07
Identities = 39/65 (60%), Positives = 44/65 (67%), Gaps = 7/65 (10%)
Frame = +2
Query: 53 VLQGLSTPFVSG---SRTLLNATIGGRSSAV---SSRRLIVVAAA-APKKSWLPGVRGGG 211
VL GL + F+SG S+TLL T G V S +RLIV AAA APKKSW+PGVR GG
Sbjct: 9 VLNGLGSSFLSGGKRSQTLLATTAIGAKVGVAAGSPKRLIVAAAASAPKKSWIPGVRFGG 68
Query: 212 NLVDP 226
NLVDP
Sbjct: 69 NLVDP 73
>gb|EXB97263.1| Chlorophyll a-b binding protein CP24 10A [Morus notabilis]
Length = 257
Score = 60.8 bits (146), Expect = 2e-07
Identities = 34/62 (54%), Positives = 39/62 (62%), Gaps = 4/62 (6%)
Frame = +2
Query: 53 VLQGLSTPFVSGS----RTLLNATIGGRSSAVSSRRLIVVAAAAPKKSWLPGVRGGGNLV 220
VL GL + F+ GS R L +A S S + +VAAAAPKKSWLPGVR GGNLV
Sbjct: 8 VLNGLGSSFLRGSKRSSRALFSAAAKTTSGNNVSPKRFIVAAAAPKKSWLPGVRAGGNLV 67
Query: 221 DP 226
DP
Sbjct: 68 DP 69
>ref|XP_006494019.1| PREDICTED: chlorophyll a-b binding protein CP24 10B,
chloroplastic-like [Citrus sinensis]
Length = 253
Score = 60.1 bits (144), Expect = 3e-07
Identities = 27/58 (46%), Positives = 40/58 (68%)
Frame = +2
Query: 53 VLQGLSTPFVSGSRTLLNATIGGRSSAVSSRRLIVVAAAAPKKSWLPGVRGGGNLVDP 226
VL GL + F++G + A + G + SS++ +VVAA PKKSW+P V+GGGNL++P
Sbjct: 9 VLNGLGSSFINGGKKS-QALLAGTNRVTSSKKSVVVAALPPKKSWIPAVKGGGNLINP 65