BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00002001
         (576 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ESW11898.1| hypothetical protein PHAVU_008G068400g [Phaseolus...   160   2e-37
ref|XP_004505465.1| PREDICTED: U6 snRNA-associated Sm-like prote...   160   2e-37
gb|AFK41314.1| unknown [Lotus japonicus]                              160   2e-37
ref|XP_003552377.1| PREDICTED: U6 snRNA-associated Sm-like prote...   160   2e-37
ref|XP_003607617.1| U6 snRNA-associated Sm-like protein LSm6 [Me...   160   2e-37
ref|NP_001237723.1| uncharacterized protein LOC100306112 [Glycin...   160   2e-37
ref|XP_002278412.1| PREDICTED: U6 snRNA-associated Sm-like prote...   160   2e-37
ref|XP_002311269.2| hypothetical protein POPTR_0008s07780g, part...   159   5e-37
gb|EOY04603.1| Small nuclear ribonucleoprotein family protein is...   159   5e-37
ref|XP_004140401.1| PREDICTED: U6 snRNA-associated Sm-like prote...   159   5e-37
ref|XP_006442140.1| hypothetical protein CICLE_v10023071mg [Citr...   159   5e-37
ref|XP_002316168.1| hypothetical protein POPTR_0010s18590g [Popu...   159   5e-37
ref|XP_006362264.1| PREDICTED: U6 snRNA-associated Sm-like prote...   159   6e-37
ref|XP_004249138.1| PREDICTED: U6 snRNA-associated Sm-like prote...   159   6e-37
gb|ABK26542.1| unknown [Picea sitchensis]                             159   6e-37
ref|NP_001131392.1| Small nuclear ribonucleoprotein F [Zea mays]...   158   8e-37
dbj|BAD23667.1| putative Sm protein F [Oryza sativa Japonica Gro...   158   1e-36
ref|XP_002447708.1| hypothetical protein SORBIDRAFT_06g013920 [S...   158   1e-36
ref|XP_002534408.1| small nuclear ribonucleoprotein f, putative ...   158   1e-36
gb|EEC73251.1| hypothetical protein OsI_07364 [Oryza sativa Indi...   158   1e-36

>gb|ESW11898.1| hypothetical protein PHAVU_008G068400g [Phaseolus vulgaris]
          Length = 91

 Score =  160 bits (405), Expect = 2e-37
 Identities = 79/79 (100%), Positives = 79/79 (100%)
 Frame = +3

Query: 102 KTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI 281
           KTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI
Sbjct: 13  KTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI 72

Query: 282 RGNNVLYISTSKRTLAEGA 338
           RGNNVLYISTSKRTLAEGA
Sbjct: 73  RGNNVLYISTSKRTLAEGA 91


>ref|XP_004505465.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm6-like isoform X1
           [Cicer arietinum] gi|502143790|ref|XP_004505466.1|
           PREDICTED: U6 snRNA-associated Sm-like protein LSm6-like
           isoform X2 [Cicer arietinum]
          Length = 90

 Score =  160 bits (405), Expect = 2e-37
 Identities = 79/79 (100%), Positives = 79/79 (100%)
 Frame = +3

Query: 102 KTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI 281
           KTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI
Sbjct: 12  KTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI 71

Query: 282 RGNNVLYISTSKRTLAEGA 338
           RGNNVLYISTSKRTLAEGA
Sbjct: 72  RGNNVLYISTSKRTLAEGA 90


>gb|AFK41314.1| unknown [Lotus japonicus]
          Length = 90

 Score =  160 bits (405), Expect = 2e-37
 Identities = 79/79 (100%), Positives = 79/79 (100%)
 Frame = +3

Query: 102 KTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI 281
           KTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI
Sbjct: 12  KTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI 71

Query: 282 RGNNVLYISTSKRTLAEGA 338
           RGNNVLYISTSKRTLAEGA
Sbjct: 72  RGNNVLYISTSKRTLAEGA 90


>ref|XP_003552377.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm6-like [Glycine
           max]
          Length = 91

 Score =  160 bits (405), Expect = 2e-37
 Identities = 79/79 (100%), Positives = 79/79 (100%)
 Frame = +3

Query: 102 KTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI 281
           KTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI
Sbjct: 13  KTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI 72

Query: 282 RGNNVLYISTSKRTLAEGA 338
           RGNNVLYISTSKRTLAEGA
Sbjct: 73  RGNNVLYISTSKRTLAEGA 91


>ref|XP_003607617.1| U6 snRNA-associated Sm-like protein LSm6 [Medicago truncatula]
           gi|355508672|gb|AES89814.1| U6 snRNA-associated Sm-like
           protein LSm6 [Medicago truncatula]
           gi|388502230|gb|AFK39181.1| unknown [Medicago
           truncatula]
          Length = 91

 Score =  160 bits (405), Expect = 2e-37
 Identities = 79/79 (100%), Positives = 79/79 (100%)
 Frame = +3

Query: 102 KTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI 281
           KTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI
Sbjct: 13  KTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI 72

Query: 282 RGNNVLYISTSKRTLAEGA 338
           RGNNVLYISTSKRTLAEGA
Sbjct: 73  RGNNVLYISTSKRTLAEGA 91


>ref|NP_001237723.1| uncharacterized protein LOC100306112 [Glycine max]
           gi|255627589|gb|ACU14139.1| unknown [Glycine max]
          Length = 91

 Score =  160 bits (405), Expect = 2e-37
 Identities = 79/79 (100%), Positives = 79/79 (100%)
 Frame = +3

Query: 102 KTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI 281
           KTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI
Sbjct: 13  KTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI 72

Query: 282 RGNNVLYISTSKRTLAEGA 338
           RGNNVLYISTSKRTLAEGA
Sbjct: 73  RGNNVLYISTSKRTLAEGA 91


>ref|XP_002278412.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm6 [Vitis
           vinifera] gi|296084324|emb|CBI24712.3| unnamed protein
           product [Vitis vinifera]
          Length = 91

 Score =  160 bits (405), Expect = 2e-37
 Identities = 79/79 (100%), Positives = 79/79 (100%)
 Frame = +3

Query: 102 KTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI 281
           KTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI
Sbjct: 13  KTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI 72

Query: 282 RGNNVLYISTSKRTLAEGA 338
           RGNNVLYISTSKRTLAEGA
Sbjct: 73  RGNNVLYISTSKRTLAEGA 91


>ref|XP_002311269.2| hypothetical protein POPTR_0008s07780g, partial [Populus
           trichocarpa] gi|550332631|gb|EEE88636.2| hypothetical
           protein POPTR_0008s07780g, partial [Populus trichocarpa]
          Length = 134

 Score =  159 bits (402), Expect = 5e-37
 Identities = 78/79 (98%), Positives = 79/79 (100%)
 Frame = +3

Query: 102 KTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI 281
           KTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI
Sbjct: 56  KTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI 115

Query: 282 RGNNVLYISTSKRTLAEGA 338
           RGNNVLYISTSKRTLA+GA
Sbjct: 116 RGNNVLYISTSKRTLADGA 134


>gb|EOY04603.1| Small nuclear ribonucleoprotein family protein isoform 1 [Theobroma
           cacao] gi|508712707|gb|EOY04604.1| Small nuclear
           ribonucleoprotein family protein isoform 1 [Theobroma
           cacao] gi|508712708|gb|EOY04605.1| Small nuclear
           ribonucleoprotein family protein isoform 1 [Theobroma
           cacao]
          Length = 91

 Score =  159 bits (402), Expect = 5e-37
 Identities = 78/79 (98%), Positives = 79/79 (100%)
 Frame = +3

Query: 102 KTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI 281
           KTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI
Sbjct: 13  KTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI 72

Query: 282 RGNNVLYISTSKRTLAEGA 338
           RGNNVLYISTSKRTLA+GA
Sbjct: 73  RGNNVLYISTSKRTLADGA 91


>ref|XP_004140401.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm6-like [Cucumis
           sativus] gi|449498381|ref|XP_004160523.1| PREDICTED: U6
           snRNA-associated Sm-like protein LSm6-like [Cucumis
           sativus]
          Length = 92

 Score =  159 bits (402), Expect = 5e-37
 Identities = 78/79 (98%), Positives = 79/79 (100%)
 Frame = +3

Query: 102 KTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI 281
           KTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI
Sbjct: 13  KTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI 72

Query: 282 RGNNVLYISTSKRTLAEGA 338
           RGNNVLYISTSKRTLAEG+
Sbjct: 73  RGNNVLYISTSKRTLAEGS 91


>ref|XP_006442140.1| hypothetical protein CICLE_v10023071mg [Citrus clementina]
           gi|568879626|ref|XP_006492754.1| PREDICTED: U6
           snRNA-associated Sm-like protein LSm6-like [Citrus
           sinensis] gi|118483023|gb|ABK93423.1| unknown [Populus
           trichocarpa] gi|557544402|gb|ESR55380.1| hypothetical
           protein CICLE_v10023071mg [Citrus clementina]
          Length = 91

 Score =  159 bits (402), Expect = 5e-37
 Identities = 78/79 (98%), Positives = 79/79 (100%)
 Frame = +3

Query: 102 KTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI 281
           KTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI
Sbjct: 13  KTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI 72

Query: 282 RGNNVLYISTSKRTLAEGA 338
           RGNNVLYISTSKRTLA+GA
Sbjct: 73  RGNNVLYISTSKRTLADGA 91


>ref|XP_002316168.1| hypothetical protein POPTR_0010s18590g [Populus trichocarpa]
           gi|118482915|gb|ABK93371.1| unknown [Populus
           trichocarpa] gi|222865208|gb|EEF02339.1| hypothetical
           protein POPTR_0010s18590g [Populus trichocarpa]
          Length = 91

 Score =  159 bits (402), Expect = 5e-37
 Identities = 78/79 (98%), Positives = 79/79 (100%)
 Frame = +3

Query: 102 KTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI 281
           KTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI
Sbjct: 13  KTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI 72

Query: 282 RGNNVLYISTSKRTLAEGA 338
           RGNNVLYISTSKRTLA+GA
Sbjct: 73  RGNNVLYISTSKRTLADGA 91


>ref|XP_006362264.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm6-like [Solanum
           tuberosum]
          Length = 91

 Score =  159 bits (401), Expect = 6e-37
 Identities = 78/79 (98%), Positives = 78/79 (98%)
 Frame = +3

Query: 102 KTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI 281
           KTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI
Sbjct: 13  KTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI 72

Query: 282 RGNNVLYISTSKRTLAEGA 338
           RGNNVLYISTSKRTL EGA
Sbjct: 73  RGNNVLYISTSKRTLGEGA 91


>ref|XP_004249138.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm6-like isoform 1
           [Solanum lycopersicum] gi|460407397|ref|XP_004249139.1|
           PREDICTED: U6 snRNA-associated Sm-like protein LSm6-like
           isoform 2 [Solanum lycopersicum]
          Length = 90

 Score =  159 bits (401), Expect = 6e-37
 Identities = 78/79 (98%), Positives = 78/79 (98%)
 Frame = +3

Query: 102 KTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI 281
           KTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI
Sbjct: 12  KTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI 71

Query: 282 RGNNVLYISTSKRTLAEGA 338
           RGNNVLYISTSKRTL EGA
Sbjct: 72  RGNNVLYISTSKRTLGEGA 90


>gb|ABK26542.1| unknown [Picea sitchensis]
          Length = 91

 Score =  159 bits (401), Expect = 6e-37
 Identities = 78/79 (98%), Positives = 78/79 (98%)
 Frame = +3

Query: 102 KTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI 281
           KTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI
Sbjct: 13  KTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI 72

Query: 282 RGNNVLYISTSKRTLAEGA 338
           RGNNVLYISTSKRTL EGA
Sbjct: 73  RGNNVLYISTSKRTLGEGA 91


>ref|NP_001131392.1| Small nuclear ribonucleoprotein F [Zea mays]
           gi|194691404|gb|ACF79786.1| unknown [Zea mays]
           gi|195605878|gb|ACG24769.1| small nuclear
           ribonucleoprotein F [Zea mays]
           gi|413918138|gb|AFW58070.1| Small nuclear
           ribonucleoprotein F [Zea mays]
          Length = 95

 Score =  158 bits (400), Expect = 8e-37
 Identities = 77/80 (96%), Positives = 80/80 (100%)
 Frame = +3

Query: 99  VKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAF 278
           VKTP+DFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAF
Sbjct: 16  VKTPSDFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAF 75

Query: 279 IRGNNVLYISTSKRTLAEGA 338
           IRGNNVLYIST+KRTLA+GA
Sbjct: 76  IRGNNVLYISTTKRTLADGA 95


>dbj|BAD23667.1| putative Sm protein F [Oryza sativa Japonica Group]
           gi|215765012|dbj|BAG86709.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|222622927|gb|EEE57059.1| hypothetical protein
           OsJ_06869 [Oryza sativa Japonica Group]
          Length = 101

 Score =  158 bits (399), Expect = 1e-36
 Identities = 77/80 (96%), Positives = 79/80 (98%)
 Frame = +3

Query: 99  VKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAF 278
           VKTP+DFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAF
Sbjct: 22  VKTPSDFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAF 81

Query: 279 IRGNNVLYISTSKRTLAEGA 338
           IRGNNVLYISTSKRTL +GA
Sbjct: 82  IRGNNVLYISTSKRTLTDGA 101


>ref|XP_002447708.1| hypothetical protein SORBIDRAFT_06g013920 [Sorghum bicolor]
           gi|241938891|gb|EES12036.1| hypothetical protein
           SORBIDRAFT_06g013920 [Sorghum bicolor]
          Length = 97

 Score =  158 bits (399), Expect = 1e-36
 Identities = 77/80 (96%), Positives = 79/80 (98%)
 Frame = +3

Query: 99  VKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAF 278
           VKTP+DFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAF
Sbjct: 18  VKTPSDFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAF 77

Query: 279 IRGNNVLYISTSKRTLAEGA 338
           IRGNNVLYISTSKRTL +GA
Sbjct: 78  IRGNNVLYISTSKRTLTDGA 97


>ref|XP_002534408.1| small nuclear ribonucleoprotein f, putative [Ricinus communis]
           gi|223525355|gb|EEF27977.1| small nuclear
           ribonucleoprotein f, putative [Ricinus communis]
          Length = 91

 Score =  158 bits (399), Expect = 1e-36
 Identities = 77/79 (97%), Positives = 79/79 (100%)
 Frame = +3

Query: 102 KTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI 281
           KTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI
Sbjct: 13  KTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI 72

Query: 282 RGNNVLYISTSKRTLAEGA 338
           RGNNVLYIST+KRTLA+GA
Sbjct: 73  RGNNVLYISTTKRTLADGA 91


>gb|EEC73251.1| hypothetical protein OsI_07364 [Oryza sativa Indica Group]
          Length = 97

 Score =  158 bits (399), Expect = 1e-36
 Identities = 77/80 (96%), Positives = 79/80 (98%)
 Frame = +3

Query: 99  VKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAF 278
           VKTP+DFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAF
Sbjct: 18  VKTPSDFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAF 77

Query: 279 IRGNNVLYISTSKRTLAEGA 338
           IRGNNVLYISTSKRTL +GA
Sbjct: 78  IRGNNVLYISTSKRTLTDGA 97