BLASTX nr result

ID: Zingiber24_contig00001796 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00001796
         (218 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEC75730.1| hypothetical protein OsI_12602 [Oryza sativa Indi...    69   5e-10
gb|ABF97599.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/...    69   5e-10
gb|ABF97598.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/...    69   5e-10
ref|XP_006651600.1| PREDICTED: uncharacterized protein LOC102714...    66   4e-09
ref|XP_002464232.1| hypothetical protein SORBIDRAFT_01g014640 [S...    64   2e-08
ref|XP_003562280.1| PREDICTED: 50S ribosomal protein L25-like [B...    64   3e-08
gb|AFW68220.1| 5S rRNA binding protein [Zea mays]                      62   6e-08
gb|AFW68219.1| hypothetical protein ZEAMMB73_040273, partial [Ze...    62   6e-08
ref|NP_001150286.1| LOC100283916 [Zea mays] gi|195638102|gb|ACG3...    62   6e-08
ref|XP_004982431.1| PREDICTED: uncharacterized protein LOC101756...    61   1e-07

>gb|EEC75730.1| hypothetical protein OsI_12602 [Oryza sativa Indica Group]
          Length = 239

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 32/52 (61%), Positives = 43/52 (82%)
 Frame = +3

Query: 54  LTADTKQIGEFLERSPYFCSTPVKLQILAGPSSVAVLQSGTVLPLQVKKNKT 209
           LTAD KQ+GE L++SPYF STPV+LQ+ AG  S AV+ SGTVLP++V +++T
Sbjct: 82  LTADRKQLGEILKQSPYFLSTPVRLQVRAGERSTAVVHSGTVLPIKVHRDET 133


>gb|ABF97599.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 containing
           protein, expressed [Oryza sativa Japonica Group]
          Length = 239

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 32/52 (61%), Positives = 43/52 (82%)
 Frame = +3

Query: 54  LTADTKQIGEFLERSPYFCSTPVKLQILAGPSSVAVLQSGTVLPLQVKKNKT 209
           LTAD KQ+GE L++SPYF STPV+LQ+ AG  S AV+ SGTVLP++V +++T
Sbjct: 82  LTADRKQLGEILKQSPYFLSTPVRLQVRAGERSTAVVHSGTVLPIKVHRDET 133


>gb|ABF97598.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 containing
           protein, expressed [Oryza sativa Japonica Group]
          Length = 182

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 32/52 (61%), Positives = 43/52 (82%)
 Frame = +3

Query: 54  LTADTKQIGEFLERSPYFCSTPVKLQILAGPSSVAVLQSGTVLPLQVKKNKT 209
           LTAD KQ+GE L++SPYF STPV+LQ+ AG  S AV+ SGTVLP++V +++T
Sbjct: 82  LTADRKQLGEILKQSPYFLSTPVRLQVRAGERSTAVVHSGTVLPIKVHRDET 133


>ref|XP_006651600.1| PREDICTED: uncharacterized protein LOC102714722, partial [Oryza
           brachyantha]
          Length = 184

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 31/52 (59%), Positives = 42/52 (80%)
 Frame = +3

Query: 54  LTADTKQIGEFLERSPYFCSTPVKLQILAGPSSVAVLQSGTVLPLQVKKNKT 209
           LTAD KQ+ E L++SPYF STPV+LQ+ AG  S AV+ SGTVLP++V +++T
Sbjct: 27  LTADRKQLREMLKQSPYFLSTPVRLQVRAGERSTAVVHSGTVLPIKVHRDET 78


>ref|XP_002464232.1| hypothetical protein SORBIDRAFT_01g014640 [Sorghum bicolor]
           gi|241918086|gb|EER91230.1| hypothetical protein
           SORBIDRAFT_01g014640 [Sorghum bicolor]
          Length = 240

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 29/54 (53%), Positives = 43/54 (79%)
 Frame = +3

Query: 48  QRLTADTKQIGEFLERSPYFCSTPVKLQILAGPSSVAVLQSGTVLPLQVKKNKT 209
           Q LTAD +Q+ E L++SPYF STPV+LQ+ AG  S A++ +GTVLP++V +++T
Sbjct: 78  QLLTADRRQLAEMLKQSPYFLSTPVRLQVRAGERSNAIVHAGTVLPIKVHRDET 131


>ref|XP_003562280.1| PREDICTED: 50S ribosomal protein L25-like [Brachypodium distachyon]
          Length = 237

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 32/56 (57%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
 Frame = +3

Query: 54  LTADTKQIGEFLERSPYFCSTPVKLQILAGPSSVAVLQSGTVLPLQVKKNK-TGQI 218
           LT D KQ+ E L++SPYF STPV+LQ+ AG  S AV+ SGTVLP++V  ++ TG I
Sbjct: 80  LTTDRKQLSEMLKQSPYFLSTPVRLQVRAGERSTAVVHSGTVLPIKVHTDESTGNI 135


>gb|AFW68220.1| 5S rRNA binding protein [Zea mays]
          Length = 239

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 28/51 (54%), Positives = 41/51 (80%)
 Frame = +3

Query: 54  LTADTKQIGEFLERSPYFCSTPVKLQILAGPSSVAVLQSGTVLPLQVKKNK 206
           LTAD +Q+ E L++SPYF STPV+LQ+ AG  S A+L +GTVLP++V +++
Sbjct: 82  LTADRRQLAEMLKQSPYFLSTPVRLQVRAGERSNAILHAGTVLPIKVHRDE 132


>gb|AFW68219.1| hypothetical protein ZEAMMB73_040273, partial [Zea mays]
          Length = 201

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 28/51 (54%), Positives = 41/51 (80%)
 Frame = +3

Query: 54  LTADTKQIGEFLERSPYFCSTPVKLQILAGPSSVAVLQSGTVLPLQVKKNK 206
           LTAD +Q+ E L++SPYF STPV+LQ+ AG  S A+L +GTVLP++V +++
Sbjct: 82  LTADRRQLAEMLKQSPYFLSTPVRLQVRAGERSNAILHAGTVLPIKVHRDE 132


>ref|NP_001150286.1| LOC100283916 [Zea mays] gi|195638102|gb|ACG38519.1| 5S rRNA binding
           protein [Zea mays]
          Length = 240

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 28/51 (54%), Positives = 41/51 (80%)
 Frame = +3

Query: 54  LTADTKQIGEFLERSPYFCSTPVKLQILAGPSSVAVLQSGTVLPLQVKKNK 206
           LTAD +Q+ E L++SPYF STPV+LQ+ AG  S A+L +GTVLP++V +++
Sbjct: 83  LTADRRQLAEMLKQSPYFLSTPVRLQVRAGERSNAILHAGTVLPIKVHRDE 133


>ref|XP_004982431.1| PREDICTED: uncharacterized protein LOC101756068 [Setaria italica]
          Length = 243

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 31/56 (55%), Positives = 44/56 (78%), Gaps = 1/56 (1%)
 Frame = +3

Query: 54  LTADTKQIGEFLERSPYFCSTPVKLQILAGPSSVAVLQSGTVLPLQVKKNK-TGQI 218
           LTA+ KQ+ E +++SPYF STPV+LQ+ AG  S AV+ SGTVLP++V +++ TG I
Sbjct: 77  LTAERKQLVEMVKQSPYFLSTPVRLQVRAGERSNAVVHSGTVLPIKVHRDESTGHI 132


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