BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00001531
         (368 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004960699.1| PREDICTED: DNA polymerase alpha subunit B-li...   130   1e-28
gb|AFW56457.1| hypothetical protein ZEAMMB73_686460 [Zea mays]        129   3e-28
ref|NP_001130410.1| uncharacterized protein LOC100191506 [Zea ma...   129   3e-28
ref|XP_002438164.1| hypothetical protein SORBIDRAFT_10g009040 [S...   127   2e-27
dbj|BAK05466.1| predicted protein [Hordeum vulgare subsp. vulgare]    126   3e-27
ref|XP_003578733.1| PREDICTED: DNA polymerase alpha subunit B-li...   124   2e-26
ref|XP_006663930.1| PREDICTED: DNA polymerase alpha subunit B-li...   122   5e-26
gb|EEE53009.1| hypothetical protein OsJ_35699 [Oryza sativa Japo...   120   2e-25
gb|EEC69071.1| hypothetical protein OsI_37935 [Oryza sativa Indi...   120   2e-25
ref|NP_001066483.1| Os12g0242900 [Oryza sativa Japonica Group] g...   120   2e-25
gb|ABG21942.1| DNA polymerase alpha subunit B family protein, ex...   120   2e-25
gb|ABA97199.2| DNA polymerase alpha subunit B family protein, ex...   120   2e-25
gb|EMT19418.1| DNA polymerase alpha subunit B [Aegilops tauschii]     119   3e-25
gb|EMS52998.1| DNA polymerase alpha subunit B [Triticum urartu]       118   7e-25
ref|XP_004239184.1| PREDICTED: DNA polymerase alpha subunit B-li...   115   6e-24
ref|XP_006858888.1| hypothetical protein AMTR_s00066p00201540 [A...   115   8e-24
ref|XP_002265789.1| PREDICTED: DNA polymerase alpha subunit B [V...   114   1e-23
gb|EMJ25471.1| hypothetical protein PRUPE_ppa018609mg [Prunus pe...   113   2e-23
ref|XP_006341754.1| PREDICTED: DNA polymerase alpha subunit B-li...   113   3e-23
gb|ESW35722.1| hypothetical protein PHAVU_001G259300g [Phaseolus...   109   3e-22

>ref|XP_004960699.1| PREDICTED: DNA polymerase alpha subunit B-like [Setaria italica]
          Length = 627

 Score =  130 bits (328), Expect = 1e-28
 Identities = 66/96 (68%), Positives = 79/96 (82%), Gaps = 2/96 (2%)
 Frame = +1

Query: 1   RQQSFYPPHPPALGVPVDFSLAVEALEIPRNPDVLILPSDLAPFVKFSH--KGSDGEVEC 174
           +QQS+YP +PPA GVP+DFSLA EALEI   PDVL+L SDLAPFVK     +GSD + + 
Sbjct: 532 KQQSYYPLYPPAAGVPLDFSLAKEALEISSAPDVLLLTSDLAPFVKVLSLGEGSDVQKQF 591

Query: 175 LCINPGRLAKGIGGGTFVELHYNRESDGTKASIIRI 282
           +C+NPGRLAKGIGGGTFVEL+YN ++D TKASIIRI
Sbjct: 592 ICMNPGRLAKGIGGGTFVELYYNEDTDRTKASIIRI 627


>gb|AFW56457.1| hypothetical protein ZEAMMB73_686460 [Zea mays]
          Length = 551

 Score =  129 bits (325), Expect = 3e-28
 Identities = 66/96 (68%), Positives = 76/96 (79%), Gaps = 2/96 (2%)
 Frame = +1

Query: 1   RQQSFYPPHPPALGVPVDFSLAVEALEIPRNPDVLILPSDLAPFVKFSH--KGSDGEVEC 174
           +QQS+YP +PPA GVP+D SLA EALEIP  PDVL+LPSDLAPFVK     +GSD +   
Sbjct: 456 KQQSYYPLYPPAPGVPLDLSLAKEALEIPSAPDVLLLPSDLAPFVKVLSLGEGSDDDRRF 515

Query: 175 LCINPGRLAKGIGGGTFVELHYNRESDGTKASIIRI 282
           +C+NPGRLAKGIGGGTFVEL+YN   D T ASIIRI
Sbjct: 516 ICVNPGRLAKGIGGGTFVELYYNEGIDKTNASIIRI 551


>ref|NP_001130410.1| uncharacterized protein LOC100191506 [Zea mays]
           gi|194689050|gb|ACF78609.1| unknown [Zea mays]
           gi|413916526|gb|AFW56458.1| hypothetical protein
           ZEAMMB73_686460 [Zea mays]
          Length = 626

 Score =  129 bits (325), Expect = 3e-28
 Identities = 66/96 (68%), Positives = 76/96 (79%), Gaps = 2/96 (2%)
 Frame = +1

Query: 1   RQQSFYPPHPPALGVPVDFSLAVEALEIPRNPDVLILPSDLAPFVKFSH--KGSDGEVEC 174
           +QQS+YP +PPA GVP+D SLA EALEIP  PDVL+LPSDLAPFVK     +GSD +   
Sbjct: 531 KQQSYYPLYPPAPGVPLDLSLAKEALEIPSAPDVLLLPSDLAPFVKVLSLGEGSDDDRRF 590

Query: 175 LCINPGRLAKGIGGGTFVELHYNRESDGTKASIIRI 282
           +C+NPGRLAKGIGGGTFVEL+YN   D T ASIIRI
Sbjct: 591 ICVNPGRLAKGIGGGTFVELYYNEGIDKTNASIIRI 626


>ref|XP_002438164.1| hypothetical protein SORBIDRAFT_10g009040 [Sorghum bicolor]
           gi|241916387|gb|EER89531.1| hypothetical protein
           SORBIDRAFT_10g009040 [Sorghum bicolor]
          Length = 626

 Score =  127 bits (318), Expect = 2e-27
 Identities = 65/96 (67%), Positives = 75/96 (78%), Gaps = 2/96 (2%)
 Frame = +1

Query: 1   RQQSFYPPHPPALGVPVDFSLAVEALEIPRNPDVLILPSDLAPFVKFSH--KGSDGEVEC 174
           +QQS+YP +P A GVP+DFSLA EALEI   PDVL+LPSDLAPFVK     +GSD +   
Sbjct: 531 KQQSYYPLYPSAAGVPLDFSLAKEALEISSAPDVLLLPSDLAPFVKVLSLGEGSDDQKRF 590

Query: 175 LCINPGRLAKGIGGGTFVELHYNRESDGTKASIIRI 282
           +C+NPGRLAKGIGGGTFVEL+YN   D T ASIIRI
Sbjct: 591 ICVNPGRLAKGIGGGTFVELYYNEGIDKTNASIIRI 626


>dbj|BAK05466.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 625

 Score =  126 bits (316), Expect = 3e-27
 Identities = 63/96 (65%), Positives = 76/96 (79%), Gaps = 2/96 (2%)
 Frame = +1

Query: 1   RQQSFYPPHPPALGVPVDFSLAVEALEIPRNPDVLILPSDLAPFVKFSHKGSDGEVE--C 174
           +QQS+YP +PPA GVP+DFSLA EALEIP  PDVL+LPSDLAP VK      D E +   
Sbjct: 530 KQQSYYPLYPPAAGVPMDFSLAKEALEIPSAPDVLLLPSDLAPSVKVLSVNEDTEEQKRF 589

Query: 175 LCINPGRLAKGIGGGTFVELHYNRESDGTKASIIRI 282
           +C+NPGRLAKGIGGGTFVEL+YN +++ TKA I+RI
Sbjct: 590 ICVNPGRLAKGIGGGTFVELYYNEDTEKTKAFIMRI 625


>ref|XP_003578733.1| PREDICTED: DNA polymerase alpha subunit B-like [Brachypodium
           distachyon]
          Length = 625

 Score =  124 bits (310), Expect = 2e-26
 Identities = 61/96 (63%), Positives = 77/96 (80%), Gaps = 2/96 (2%)
 Frame = +1

Query: 1   RQQSFYPPHPPALGVPVDFSLAVEALEIPRNPDVLILPSDLAPFVKF--SHKGSDGEVEC 174
           +QQS+YP +PPA GVP+DFSLA EA EI   PDVL+LPSDLAPFVK    ++G++ +   
Sbjct: 530 KQQSYYPLYPPAAGVPMDFSLAKEAFEISSPPDVLLLPSDLAPFVKVLSLNEGAEEQKWF 589

Query: 175 LCINPGRLAKGIGGGTFVELHYNRESDGTKASIIRI 282
           +C+NPGRLAKGIGGGTFVEL+YN ++D T A I+RI
Sbjct: 590 VCVNPGRLAKGIGGGTFVELYYNEDTDKTNAFIMRI 625


>ref|XP_006663930.1| PREDICTED: DNA polymerase alpha subunit B-like [Oryza brachyantha]
          Length = 410

 Score =  122 bits (306), Expect = 5e-26
 Identities = 62/96 (64%), Positives = 74/96 (77%), Gaps = 2/96 (2%)
 Frame = +1

Query: 1   RQQSFYPPHPPALGVPVDFSLAVEALEIPRNPDVLILPSDLAPFVKF--SHKGSDGEVEC 174
           +QQS+YP +PP  GVP+DFSLA  ALEI   PDVL+LPSDLAPFVK     + S+     
Sbjct: 315 KQQSYYPLYPPPAGVPLDFSLASGALEISSAPDVLLLPSDLAPFVKVLSLDESSEEPKHF 374

Query: 175 LCINPGRLAKGIGGGTFVELHYNRESDGTKASIIRI 282
           +C+NPGRLAKGIGGGTFVEL+YN ++D T ASIIRI
Sbjct: 375 ICVNPGRLAKGIGGGTFVELNYNEDTDKTSASIIRI 410


>gb|EEE53009.1| hypothetical protein OsJ_35699 [Oryza sativa Japonica Group]
          Length = 625

 Score =  120 bits (301), Expect = 2e-25
 Identities = 61/96 (63%), Positives = 74/96 (77%), Gaps = 2/96 (2%)
 Frame = +1

Query: 1   RQQSFYPPHPPALGVPVDFSLAVEALEIPRNPDVLILPSDLAPFVKF--SHKGSDGEVEC 174
           +QQS+YP +PP  GVP+DFSLA  ALEI   PDVL+LPSDLAPFVK     + S+     
Sbjct: 530 KQQSYYPLYPPPAGVPLDFSLANGALEIASAPDVLLLPSDLAPFVKVLSLDESSEEPKRF 589

Query: 175 LCINPGRLAKGIGGGTFVELHYNRESDGTKASIIRI 282
           +C+NPGRLAKGIGGGTFVEL+YN ++D T AS+IRI
Sbjct: 590 ICMNPGRLAKGIGGGTFVELNYNEDTDKTSASLIRI 625


>gb|EEC69071.1| hypothetical protein OsI_37935 [Oryza sativa Indica Group]
          Length = 625

 Score =  120 bits (301), Expect = 2e-25
 Identities = 61/96 (63%), Positives = 74/96 (77%), Gaps = 2/96 (2%)
 Frame = +1

Query: 1   RQQSFYPPHPPALGVPVDFSLAVEALEIPRNPDVLILPSDLAPFVKF--SHKGSDGEVEC 174
           +QQS+YP +PP  GVP+DFSLA  ALEI   PDVL+LPSDLAPFVK     + S+     
Sbjct: 530 KQQSYYPLYPPPAGVPLDFSLANGALEIASAPDVLLLPSDLAPFVKVLSLDESSEEPKRF 589

Query: 175 LCINPGRLAKGIGGGTFVELHYNRESDGTKASIIRI 282
           +C+NPGRLAKGIGGGTFVEL+YN ++D T AS+IRI
Sbjct: 590 ICMNPGRLAKGIGGGTFVELNYNEDTDKTSASLIRI 625


>ref|NP_001066483.1| Os12g0242900 [Oryza sativa Japonica Group]
           gi|113648990|dbj|BAF29502.1| Os12g0242900, partial
           [Oryza sativa Japonica Group]
          Length = 400

 Score =  120 bits (301), Expect = 2e-25
 Identities = 61/96 (63%), Positives = 74/96 (77%), Gaps = 2/96 (2%)
 Frame = +1

Query: 1   RQQSFYPPHPPALGVPVDFSLAVEALEIPRNPDVLILPSDLAPFVKF--SHKGSDGEVEC 174
           +QQS+YP +PP  GVP+DFSLA  ALEI   PDVL+LPSDLAPFVK     + S+     
Sbjct: 305 KQQSYYPLYPPPAGVPLDFSLANGALEIASAPDVLLLPSDLAPFVKVLSLDESSEEPKRF 364

Query: 175 LCINPGRLAKGIGGGTFVELHYNRESDGTKASIIRI 282
           +C+NPGRLAKGIGGGTFVEL+YN ++D T AS+IRI
Sbjct: 365 ICMNPGRLAKGIGGGTFVELNYNEDTDKTSASLIRI 400


>gb|ABG21942.1| DNA polymerase alpha subunit B family protein, expressed [Oryza
           sativa Japonica Group]
          Length = 339

 Score =  120 bits (301), Expect = 2e-25
 Identities = 61/96 (63%), Positives = 74/96 (77%), Gaps = 2/96 (2%)
 Frame = +1

Query: 1   RQQSFYPPHPPALGVPVDFSLAVEALEIPRNPDVLILPSDLAPFVKF--SHKGSDGEVEC 174
           +QQS+YP +PP  GVP+DFSLA  ALEI   PDVL+LPSDLAPFVK     + S+     
Sbjct: 244 KQQSYYPLYPPPAGVPLDFSLANGALEIASAPDVLLLPSDLAPFVKVLSLDESSEEPKRF 303

Query: 175 LCINPGRLAKGIGGGTFVELHYNRESDGTKASIIRI 282
           +C+NPGRLAKGIGGGTFVEL+YN ++D T AS+IRI
Sbjct: 304 ICMNPGRLAKGIGGGTFVELNYNEDTDKTSASLIRI 339


>gb|ABA97199.2| DNA polymerase alpha subunit B family protein, expressed [Oryza
           sativa Japonica Group] gi|215693905|dbj|BAG89104.1|
           unnamed protein product [Oryza sativa Japonica Group]
          Length = 368

 Score =  120 bits (301), Expect = 2e-25
 Identities = 61/96 (63%), Positives = 74/96 (77%), Gaps = 2/96 (2%)
 Frame = +1

Query: 1   RQQSFYPPHPPALGVPVDFSLAVEALEIPRNPDVLILPSDLAPFVKF--SHKGSDGEVEC 174
           +QQS+YP +PP  GVP+DFSLA  ALEI   PDVL+LPSDLAPFVK     + S+     
Sbjct: 273 KQQSYYPLYPPPAGVPLDFSLANGALEIASAPDVLLLPSDLAPFVKVLSLDESSEEPKRF 332

Query: 175 LCINPGRLAKGIGGGTFVELHYNRESDGTKASIIRI 282
           +C+NPGRLAKGIGGGTFVEL+YN ++D T AS+IRI
Sbjct: 333 ICMNPGRLAKGIGGGTFVELNYNEDTDKTSASLIRI 368


>gb|EMT19418.1| DNA polymerase alpha subunit B [Aegilops tauschii]
          Length = 594

 Score =  119 bits (299), Expect = 3e-25
 Identities = 60/93 (64%), Positives = 72/93 (77%), Gaps = 2/93 (2%)
 Frame = +1

Query: 10  SFYPPHPPALGVPVDFSLAVEALEIPRNPDVLILPSDLAPFVKFSHKGSDGE--VECLCI 183
           S+YP +PPA GVP+DFSLA EALEIP  PDVL+LPSDLAP VK      D E     +C+
Sbjct: 502 SYYPLYPPAAGVPMDFSLAKEALEIPSAPDVLLLPSDLAPSVKVLSVNEDTEEHKRFICV 561

Query: 184 NPGRLAKGIGGGTFVELHYNRESDGTKASIIRI 282
           NPGRL+KGIGGGTFVEL+YN +++ TKA I+RI
Sbjct: 562 NPGRLSKGIGGGTFVELYYNEDTEKTKAFIMRI 594


>gb|EMS52998.1| DNA polymerase alpha subunit B [Triticum urartu]
          Length = 577

 Score =  118 bits (296), Expect = 7e-25
 Identities = 59/94 (62%), Positives = 72/94 (76%), Gaps = 2/94 (2%)
 Frame = +1

Query: 7   QSFYPPHPPALGVPVDFSLAVEALEIPRNPDVLILPSDLAPFVKFSHKGSDGE--VECLC 180
           + +YP +PPA GVP+DFSLA EALEIP  PDVL+LPSDLAP VK      D E     +C
Sbjct: 484 ERYYPLYPPAAGVPMDFSLAKEALEIPSAPDVLLLPSDLAPSVKVLSVNEDTEEHKRFIC 543

Query: 181 INPGRLAKGIGGGTFVELHYNRESDGTKASIIRI 282
           +NPGRL+KGIGGGTFVEL+YN +++ TKA I+RI
Sbjct: 544 VNPGRLSKGIGGGTFVELYYNEDTEKTKAFIMRI 577


>ref|XP_004239184.1| PREDICTED: DNA polymerase alpha subunit B-like [Solanum
           lycopersicum]
          Length = 617

 Score =  115 bits (288), Expect = 6e-24
 Identities = 57/96 (59%), Positives = 76/96 (79%), Gaps = 3/96 (3%)
 Frame = +1

Query: 4   QQSFYPPHPPALGVPVDFSLAVEALEIPRNPDVLILPSDLAPFVKFSHKG--SDG-EVEC 174
           Q+SFYP +PPA GVP+DFSLA EAL++  +PD+LILPSDLA FV+    G  S+G EV+C
Sbjct: 522 QRSFYPLYPPAEGVPIDFSLAPEALQMSTDPDILILPSDLAHFVRVVSLGERSEGEEVKC 581

Query: 175 LCINPGRLAKGIGGGTFVELHYNRESDGTKASIIRI 282
           +C+NPGRL++G GGG FVEL+Y+   D + AS++RI
Sbjct: 582 ICVNPGRLSRGEGGGFFVELNYHGSCDSSSASVLRI 617


>ref|XP_006858888.1| hypothetical protein AMTR_s00066p00201540 [Amborella trichopoda]
           gi|548862999|gb|ERN20355.1| hypothetical protein
           AMTR_s00066p00201540 [Amborella trichopoda]
          Length = 628

 Score =  115 bits (287), Expect = 8e-24
 Identities = 56/98 (57%), Positives = 71/98 (72%), Gaps = 4/98 (4%)
 Frame = +1

Query: 1   RQQSFYPPHPPALGVPVDFSLAVEALEIPRNPDVLILPSDLAPFVKFSHKGSDGEVE--- 171
           +Q+ FYP +PP++G+P+DFS+A EAL +   PD+L++PSDLAPF+K    G   + E   
Sbjct: 531 KQRCFYPVYPPSVGLPLDFSIAPEALHMASIPDLLLMPSDLAPFIKALPFGEGSDTEKYS 590

Query: 172 -CLCINPGRLAKGIGGGTFVELHYNRESDGTKASIIRI 282
            CLCINPGRLAKG+ GGTFVEL Y    D T ASIIRI
Sbjct: 591 RCLCINPGRLAKGVSGGTFVELSYLNNPDQTSASIIRI 628


>ref|XP_002265789.1| PREDICTED: DNA polymerase alpha subunit B [Vitis vinifera]
           gi|297738371|emb|CBI27572.3| unnamed protein product
           [Vitis vinifera]
          Length = 623

 Score =  114 bits (286), Expect = 1e-23
 Identities = 60/97 (61%), Positives = 70/97 (72%), Gaps = 4/97 (4%)
 Frame = +1

Query: 4   QQSFYPPHPPALGVPVDFSLAVEALEIPRNPDVLILPSDLAPFVKFSHKGSDGE----VE 171
           Q+SFYP +P A G+P+DFSLA EALE+   PDVLILPSDLA FVK    G   E    V+
Sbjct: 527 QRSFYPLYPLAEGIPLDFSLAPEALEVSTIPDVLILPSDLASFVKVLSLGGRNEGEELVK 586

Query: 172 CLCINPGRLAKGIGGGTFVELHYNRESDGTKASIIRI 282
           C+C+NPGRLAKG GGG FVEL+Y    D T AS+IRI
Sbjct: 587 CICVNPGRLAKGEGGGHFVELNYQGSPDKTSASVIRI 623


>gb|EMJ25471.1| hypothetical protein PRUPE_ppa018609mg [Prunus persica]
          Length = 612

 Score =  113 bits (283), Expect = 2e-23
 Identities = 58/94 (61%), Positives = 69/94 (73%), Gaps = 1/94 (1%)
 Frame = +1

Query: 4   QQSFYPPHPPALGVPVDFSLAVEALEIPRNPDVLILPSDLAPFVKFSHKGSDGE-VECLC 180
           Q+SFYP +PPA G+P+DFSLA EAL I   PD+LILPSD+  FVK    G + E V+C+C
Sbjct: 519 QRSFYPLYPPAEGIPLDFSLAPEALNISLIPDILILPSDMKHFVKVKWSGEEKEQVKCIC 578

Query: 181 INPGRLAKGIGGGTFVELHYNRESDGTKASIIRI 282
           +NPGRLAKG GGGTFVEL+Y    D   ASII I
Sbjct: 579 VNPGRLAKGEGGGTFVELNYYGNPDTCNASIIGI 612


>ref|XP_006341754.1| PREDICTED: DNA polymerase alpha subunit B-like [Solanum tuberosum]
          Length = 617

 Score =  113 bits (282), Expect = 3e-23
 Identities = 56/96 (58%), Positives = 75/96 (78%), Gaps = 3/96 (3%)
 Frame = +1

Query: 4   QQSFYPPHPPALGVPVDFSLAVEALEIPRNPDVLILPSDLAPFVKFSHKG--SDG-EVEC 174
           Q+SFYP +PPA GVP+DFSLA EAL++   PD+LILPSDLA FV+    G  S+G EV+C
Sbjct: 522 QRSFYPLYPPAEGVPIDFSLAPEALQMSTAPDILILPSDLAHFVRVISLGERSEGEEVKC 581

Query: 175 LCINPGRLAKGIGGGTFVELHYNRESDGTKASIIRI 282
           +C+NPGRL++G GGG F+EL+Y+   D + AS++RI
Sbjct: 582 ICVNPGRLSRGEGGGFFMELNYHGSCDSSSASVLRI 617


>gb|ESW35722.1| hypothetical protein PHAVU_001G259300g [Phaseolus vulgaris]
          Length = 625

 Score =  109 bits (273), Expect = 3e-22
 Identities = 57/97 (58%), Positives = 68/97 (70%), Gaps = 4/97 (4%)
 Frame = +1

Query: 4   QQSFYPPHPPALGVPVDFSLAVEALEIPRNPDVLILPSDLAPFVKFSHKGSDG----EVE 171
           QQSFYP +PPA  VP+DFSLA EAL++   PD+LILPSD+  FVK     S+G      +
Sbjct: 529 QQSFYPLYPPAESVPLDFSLAPEALQLSLVPDILILPSDIKYFVKMLSSESEGINNSNSK 588

Query: 172 CLCINPGRLAKGIGGGTFVELHYNRESDGTKASIIRI 282
           C+ +NPGRLAKG GGGTFVELHY   SD   ASI+ I
Sbjct: 589 CIAVNPGRLAKGEGGGTFVELHYGGGSDQINASIVGI 625