BLASTX nr result
ID: Zingiber24_contig00001506
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00001506
(510 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006838860.1| hypothetical protein AMTR_s00002p00266120 [A... 94 2e-17
gb|AEI83508.1| chloroplast photosystem II reaction center W-like... 91 1e-16
gb|ADB85767.1| chloroplast photosystem II reaction center W-like... 91 1e-16
gb|AEJ88280.1| putative chloroplast photosystem II reaction cent... 89 8e-16
ref|XP_002307627.1| hypothetical protein POPTR_0005s24030g [Popu... 88 1e-15
dbj|BAJ92812.1| predicted protein [Hordeum vulgare subsp. vulgar... 87 2e-15
ref|XP_006417879.1| hypothetical protein EUTSA_v10009104mg [Eutr... 85 1e-14
ref|XP_006443912.1| hypothetical protein CICLE_v10024455mg [Citr... 84 1e-14
gb|ACG31447.1| photosystem II reaction center W protein [Zea mays] 84 1e-14
ref|XP_002300801.2| hypothetical protein POPTR_0002s04520g [Popu... 84 1e-14
ref|XP_002458578.1| hypothetical protein SORBIDRAFT_03g036090 [S... 84 2e-14
ref|XP_004961567.1| PREDICTED: photosystem II reaction center W ... 83 4e-14
ref|NP_001235636.1| uncharacterized protein LOC100306223 [Glycin... 83 4e-14
gb|ACF85777.1| unknown [Zea mays] gi|194708378|gb|ACF88273.1| un... 83 4e-14
gb|EMS64749.1| Photosystem II reaction center W protein, chlorop... 82 6e-14
dbj|BAK02834.1| predicted protein [Hordeum vulgare subsp. vulgare] 82 6e-14
ref|XP_002440047.1| hypothetical protein SORBIDRAFT_09g025010 [S... 82 6e-14
ref|XP_006383688.1| hypothetical protein POPTR_0005s24030g [Popu... 82 7e-14
ref|XP_003569933.1| PREDICTED: photosystem II reaction center W ... 82 7e-14
ref|NP_001150186.1| LOC100283816 [Zea mays] gi|195637404|gb|ACG3... 82 7e-14
>ref|XP_006838860.1| hypothetical protein AMTR_s00002p00266120 [Amborella trichopoda]
gi|548841366|gb|ERN01429.1| hypothetical protein
AMTR_s00002p00266120 [Amborella trichopoda]
Length = 128
Score = 93.6 bits (231), Expect = 2e-17
Identities = 52/83 (62%), Positives = 54/83 (65%)
Frame = +3
Query: 12 GLPRLACKGRTVRCSTHEEKXXXXXXXXXXXXXXXXXXSPALALVDERMSTEGTGLSLGI 191
GLP LA KG VRCS + SPALALVDER+STEGTGLSLGI
Sbjct: 33 GLPTLAKKGG-VRCSLEAKPSTNPCVGAALVASVATISSPALALVDERLSTEGTGLSLGI 91
Query: 192 SNNLLAWILLAVFGLIWALYFAY 260
SNNLLAWIL VFGLIWALYF Y
Sbjct: 92 SNNLLAWILFGVFGLIWALYFIY 114
>gb|AEI83508.1| chloroplast photosystem II reaction center W-like protein [Wolffia
arrhiza]
Length = 127
Score = 91.3 bits (225), Expect = 1e-16
Identities = 50/92 (54%), Positives = 55/92 (59%), Gaps = 6/92 (6%)
Frame = +3
Query: 3 RTAGLPRL------ACKGRTVRCSTHEEKXXXXXXXXXXXXXXXXXXSPALALVDERMST 164
R++ LP L +G V+CS EEK SP LALVDER+ST
Sbjct: 22 RSSSLPLLPLPRRGGARGMQVKCSAAEEKKAPAVASLLAAASVMATSSPGLALVDERLST 81
Query: 165 EGTGLSLGISNNLLAWILLAVFGLIWALYFAY 260
EGTGLSLGISNNLL WIL VFGLIWALYF Y
Sbjct: 82 EGTGLSLGISNNLLIWILAGVFGLIWALYFVY 113
>gb|ADB85767.1| chloroplast photosystem II reaction center W-like protein [Wolffia
arrhiza]
Length = 127
Score = 91.3 bits (225), Expect = 1e-16
Identities = 50/92 (54%), Positives = 56/92 (60%), Gaps = 6/92 (6%)
Frame = +3
Query: 3 RTAGLPRL------ACKGRTVRCSTHEEKXXXXXXXXXXXXXXXXXXSPALALVDERMST 164
R++ LP L +G V+CS EE+ SPALALVDER+ST
Sbjct: 22 RSSSLPLLPLPRRGGARGMQVKCSATEEEKAPAVASLLAAASVMATSSPALALVDERLST 81
Query: 165 EGTGLSLGISNNLLAWILLAVFGLIWALYFAY 260
EGTGLSLGISNNLL WIL VFGLIWALYF Y
Sbjct: 82 EGTGLSLGISNNLLIWILAGVFGLIWALYFVY 113
>gb|AEJ88280.1| putative chloroplast photosystem II reaction center W-like protein
[Wolffia australiana] gi|374096161|gb|AEY84993.1|
photosystem II reaction center W protein (chloroplast)
[Wolffia australiana]
Length = 132
Score = 88.6 bits (218), Expect = 8e-16
Identities = 50/85 (58%), Positives = 54/85 (63%), Gaps = 2/85 (2%)
Frame = +3
Query: 12 GLPRLA-CKGRTVRCSTH-EEKXXXXXXXXXXXXXXXXXXSPALALVDERMSTEGTGLSL 185
GLPR + V+CS EEK +PALALVDER+STEGTGLSL
Sbjct: 34 GLPRRGGARAMQVKCSAAAEEKKVPAVASLLAAASVMATSNPALALVDERLSTEGTGLSL 93
Query: 186 GISNNLLAWILLAVFGLIWALYFAY 260
GISNNLLAWIL VFGLIWALYF Y
Sbjct: 94 GISNNLLAWILAGVFGLIWALYFVY 118
>ref|XP_002307627.1| hypothetical protein POPTR_0005s24030g [Populus trichocarpa]
gi|118486017|gb|ABK94852.1| unknown [Populus
trichocarpa] gi|222857076|gb|EEE94623.1| hypothetical
protein POPTR_0005s24030g [Populus trichocarpa]
Length = 134
Score = 88.2 bits (217), Expect = 1e-15
Identities = 51/88 (57%), Positives = 53/88 (60%), Gaps = 5/88 (5%)
Frame = +3
Query: 12 GLPRLACKGRTVRCSTH-----EEKXXXXXXXXXXXXXXXXXXSPALALVDERMSTEGTG 176
GLP +A KGR V CS EEK SPALALVDERMSTEGTG
Sbjct: 34 GLPAMAKKGR-VSCSMEGKPSVEEKCKGMSASLMAAVCAASMSSPALALVDERMSTEGTG 92
Query: 177 LSLGISNNLLAWILLAVFGLIWALYFAY 260
L G+SNNLL WILL VF LIWALYF Y
Sbjct: 93 LPFGLSNNLLVWILLGVFALIWALYFTY 120
>dbj|BAJ92812.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326521836|dbj|BAK00494.1| predicted protein [Hordeum
vulgare subsp. vulgare]
Length = 128
Score = 87.4 bits (215), Expect = 2e-15
Identities = 48/89 (53%), Positives = 54/89 (60%), Gaps = 6/89 (6%)
Frame = +3
Query: 12 GLPRLACKGRTVRCSTHEEKXXXXXXXXXXXXXXXXXXS------PALALVDERMSTEGT 173
GLP+L +G VRCS +E + PALALVDERMSTEGT
Sbjct: 25 GLPQLRTRGERVRCSYSKEATPAAAARGAGASLLAAAGAVTASAGPALALVDERMSTEGT 84
Query: 174 GLSLGISNNLLAWILLAVFGLIWALYFAY 260
GLSLG+SNNLL WILL VFGLIW+LY Y
Sbjct: 85 GLSLGLSNNLLGWILLGVFGLIWSLYTVY 113
>ref|XP_006417879.1| hypothetical protein EUTSA_v10009104mg [Eutrema salsugineum]
gi|557095650|gb|ESQ36232.1| hypothetical protein
EUTSA_v10009104mg [Eutrema salsugineum]
Length = 128
Score = 84.7 bits (208), Expect = 1e-14
Identities = 44/86 (51%), Positives = 52/86 (60%), Gaps = 3/86 (3%)
Frame = +3
Query: 12 GLPRLACKGRTVRCSTH---EEKXXXXXXXXXXXXXXXXXXSPALALVDERMSTEGTGLS 182
G+PR++ + V+CS E+ SPA+ALVDERMSTEGTGL
Sbjct: 29 GVPRMSKRSSGVKCSMETKQEKSSTAGASAVAAMLTAVMSSSPAMALVDERMSTEGTGLP 88
Query: 183 LGISNNLLAWILLAVFGLIWALYFAY 260
G+SNNLL WIL VFGLIWALYF Y
Sbjct: 89 FGLSNNLLGWILFGVFGLIWALYFTY 114
>ref|XP_006443912.1| hypothetical protein CICLE_v10024455mg [Citrus clementina]
gi|568851829|ref|XP_006479589.1| PREDICTED: photosystem
II reaction center W protein, chloroplastic-like [Citrus
sinensis] gi|557546174|gb|ESR57152.1| hypothetical
protein CICLE_v10024455mg [Citrus clementina]
Length = 135
Score = 84.3 bits (207), Expect = 1e-14
Identities = 48/90 (53%), Positives = 53/90 (58%), Gaps = 7/90 (7%)
Frame = +3
Query: 12 GLPRLACKGRTVRCSTHEEKXXXXXXXXXXXXXXXXXX-------SPALALVDERMSTEG 170
GLP +A KG+ VRCS E+ SPA+ALVDERMSTEG
Sbjct: 33 GLPAMAVKGK-VRCSMEEKPSKQESKTNVGMSASLLAAACAATMSSPAMALVDERMSTEG 91
Query: 171 TGLSLGISNNLLAWILLAVFGLIWALYFAY 260
TGL G+SNNLL WILL VFGLIWALY Y
Sbjct: 92 TGLPFGLSNNLLGWILLGVFGLIWALYIPY 121
>gb|ACG31447.1| photosystem II reaction center W protein [Zea mays]
Length = 131
Score = 84.3 bits (207), Expect = 1e-14
Identities = 47/89 (52%), Positives = 52/89 (58%), Gaps = 5/89 (5%)
Frame = +3
Query: 9 AGLPRLACKGRTVRCSTHEEKXXXXXXXXXXXXXXXXXX-----SPALALVDERMSTEGT 173
AGLP L + VRCS ++ PALALVDERMSTEGT
Sbjct: 28 AGLPALRARSERVRCSYAKDAAPVSTKGAGASLLAAAGAVTASAGPALALVDERMSTEGT 87
Query: 174 GLSLGISNNLLAWILLAVFGLIWALYFAY 260
GLSLG+SNNLL WILL VFGLIW+LY Y
Sbjct: 88 GLSLGLSNNLLGWILLGVFGLIWSLYTIY 116
>ref|XP_002300801.2| hypothetical protein POPTR_0002s04520g [Populus trichocarpa]
gi|118489315|gb|ABK96462.1| unknown [Populus trichocarpa
x Populus deltoides] gi|550344272|gb|EEE80074.2|
hypothetical protein POPTR_0002s04520g [Populus
trichocarpa]
Length = 133
Score = 84.3 bits (207), Expect = 1e-14
Identities = 48/88 (54%), Positives = 53/88 (60%), Gaps = 5/88 (5%)
Frame = +3
Query: 12 GLPRLACKGRTVRCS-----THEEKXXXXXXXXXXXXXXXXXXSPALALVDERMSTEGTG 176
GLP +A KG+ V CS T EEK SPALALVDER+STEGTG
Sbjct: 33 GLPAIAKKGK-VSCSMEGKPTVEEKSKGMSASLMAAVCAATISSPALALVDERLSTEGTG 91
Query: 177 LSLGISNNLLAWILLAVFGLIWALYFAY 260
L G+SNNLL WILL VF IW+LYF Y
Sbjct: 92 LPFGLSNNLLVWILLGVFAFIWSLYFVY 119
>ref|XP_002458578.1| hypothetical protein SORBIDRAFT_03g036090 [Sorghum bicolor]
gi|241930553|gb|EES03698.1| hypothetical protein
SORBIDRAFT_03g036090 [Sorghum bicolor]
Length = 126
Score = 84.0 bits (206), Expect = 2e-14
Identities = 46/88 (52%), Positives = 52/88 (59%), Gaps = 5/88 (5%)
Frame = +3
Query: 12 GLPRLACKGRTVRCSTHEEKXXXXXXXXXXXXXXXXXX-----SPALALVDERMSTEGTG 176
GLP+L + VRCS ++ PALALVDERMSTEGTG
Sbjct: 25 GLPQLRARSERVRCSYAKDAAAVSAKAAGASLLAAAGAVTASAGPALALVDERMSTEGTG 84
Query: 177 LSLGISNNLLAWILLAVFGLIWALYFAY 260
LSLG+SNNLL WILL VFGLIW+LY Y
Sbjct: 85 LSLGLSNNLLGWILLGVFGLIWSLYTVY 112
>ref|XP_004961567.1| PREDICTED: photosystem II reaction center W protein,
chloroplastic-like [Setaria italica]
Length = 204
Score = 82.8 bits (203), Expect = 4e-14
Identities = 47/93 (50%), Positives = 52/93 (55%), Gaps = 10/93 (10%)
Frame = +3
Query: 12 GLPRLACKGRTVRCSTHEEKXXXXXXXXXXXXXXXXXX----------SPALALVDERMS 161
GLP+L + VRCS + SPALALVDERMS
Sbjct: 97 GLPQLRARADKVRCSACSRQQDGSGKGAAAPAAGASSLLAVASAMTTSSPALALVDERMS 156
Query: 162 TEGTGLSLGISNNLLAWILLAVFGLIWALYFAY 260
TEGTGLSLG+SNNLL WILL VFGLIW+LY Y
Sbjct: 157 TEGTGLSLGLSNNLLGWILLGVFGLIWSLYTVY 189
>ref|NP_001235636.1| uncharacterized protein LOC100306223 [Glycine max]
gi|255627917|gb|ACU14303.1| unknown [Glycine max]
Length = 132
Score = 82.8 bits (203), Expect = 4e-14
Identities = 46/87 (52%), Positives = 52/87 (59%), Gaps = 4/87 (4%)
Frame = +3
Query: 12 GLPRLACKGRTVRCSTHEE----KXXXXXXXXXXXXXXXXXXSPALALVDERMSTEGTGL 179
GLP +A G+ VRCS E+ SPA+ALVDER+STEGTGL
Sbjct: 33 GLPAMAKAGK-VRCSMEEKPSSSSNIGMGASLLAAAVAATMSSPAMALVDERLSTEGTGL 91
Query: 180 SLGISNNLLAWILLAVFGLIWALYFAY 260
G+SNNLL WIL VFGLIWALYF Y
Sbjct: 92 PFGLSNNLLGWILFGVFGLIWALYFVY 118
>gb|ACF85777.1| unknown [Zea mays] gi|194708378|gb|ACF88273.1| unknown [Zea mays]
gi|195617568|gb|ACG30614.1| photosystem II reaction
center W protein [Zea mays] gi|414880272|tpg|DAA57403.1|
TPA: hypothetical protein ZEAMMB73_527010 [Zea mays]
Length = 127
Score = 82.8 bits (203), Expect = 4e-14
Identities = 46/88 (52%), Positives = 51/88 (57%), Gaps = 5/88 (5%)
Frame = +3
Query: 12 GLPRLACKGRTVRCSTHEEKXXXXXXXXXXXXXXXXXX-----SPALALVDERMSTEGTG 176
GLP L + VRCS ++ PALALVDERMSTEGTG
Sbjct: 25 GLPALRARSERVRCSYAKDAAPVSTKGAGASLLAAAGAVTASAGPALALVDERMSTEGTG 84
Query: 177 LSLGISNNLLAWILLAVFGLIWALYFAY 260
LSLG+SNNLL WILL VFGLIW+LY Y
Sbjct: 85 LSLGLSNNLLGWILLGVFGLIWSLYTIY 112
>gb|EMS64749.1| Photosystem II reaction center W protein, chloroplastic [Triticum
urartu]
Length = 154
Score = 82.4 bits (202), Expect = 6e-14
Identities = 39/45 (86%), Positives = 41/45 (91%)
Frame = +3
Query: 126 SPALALVDERMSTEGTGLSLGISNNLLAWILLAVFGLIWALYFAY 260
SPALALVDERMSTEGTGLSLG+SNNLL WILL VFGLIW+LY Y
Sbjct: 95 SPALALVDERMSTEGTGLSLGLSNNLLGWILLGVFGLIWSLYTVY 139
>dbj|BAK02834.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 98
Score = 82.4 bits (202), Expect = 6e-14
Identities = 39/45 (86%), Positives = 41/45 (91%)
Frame = +3
Query: 126 SPALALVDERMSTEGTGLSLGISNNLLAWILLAVFGLIWALYFAY 260
SPALALVDERMSTEGTGLSLG+SNNLL WILL VFGLIW+LY Y
Sbjct: 39 SPALALVDERMSTEGTGLSLGLSNNLLGWILLGVFGLIWSLYTVY 83
>ref|XP_002440047.1| hypothetical protein SORBIDRAFT_09g025010 [Sorghum bicolor]
gi|241945332|gb|EES18477.1| hypothetical protein
SORBIDRAFT_09g025010 [Sorghum bicolor]
Length = 63
Score = 82.4 bits (202), Expect = 6e-14
Identities = 39/45 (86%), Positives = 41/45 (91%)
Frame = +3
Query: 126 SPALALVDERMSTEGTGLSLGISNNLLAWILLAVFGLIWALYFAY 260
SPALALVDERMSTEGTGLSLG+SNNLL WILL VFGLIW+LY Y
Sbjct: 5 SPALALVDERMSTEGTGLSLGLSNNLLGWILLGVFGLIWSLYTVY 49
>ref|XP_006383688.1| hypothetical protein POPTR_0005s24030g [Populus trichocarpa]
gi|550339640|gb|ERP61485.1| hypothetical protein
POPTR_0005s24030g [Populus trichocarpa]
Length = 131
Score = 82.0 bits (201), Expect = 7e-14
Identities = 48/84 (57%), Positives = 50/84 (59%), Gaps = 5/84 (5%)
Frame = +3
Query: 24 LACKGRTVRCSTH-----EEKXXXXXXXXXXXXXXXXXXSPALALVDERMSTEGTGLSLG 188
+A KGR V CS EEK SPALALVDERMSTEGTGL G
Sbjct: 35 MAKKGR-VSCSMEGKPSVEEKCKGMSASLMAAVCAASMSSPALALVDERMSTEGTGLPFG 93
Query: 189 ISNNLLAWILLAVFGLIWALYFAY 260
+SNNLL WILL VF LIWALYF Y
Sbjct: 94 LSNNLLVWILLGVFALIWALYFTY 117
>ref|XP_003569933.1| PREDICTED: photosystem II reaction center W protein,
chloroplastic-like [Brachypodium distachyon]
Length = 131
Score = 82.0 bits (201), Expect = 7e-14
Identities = 45/92 (48%), Positives = 53/92 (57%), Gaps = 9/92 (9%)
Frame = +3
Query: 12 GLPRLACKGRTVRCSTHEEK---------XXXXXXXXXXXXXXXXXXSPALALVDERMST 164
GLP+L + VRCS ++ +PALALVD+RMST
Sbjct: 25 GLPQLRARSERVRCSYSKDAKEATPTTSVRGAGASLLAAAGAVTASAAPALALVDDRMST 84
Query: 165 EGTGLSLGISNNLLAWILLAVFGLIWALYFAY 260
EGTGLSLG+SNNLL WILL VFGLIW+LY Y
Sbjct: 85 EGTGLSLGLSNNLLGWILLGVFGLIWSLYTVY 116
>ref|NP_001150186.1| LOC100283816 [Zea mays] gi|195637404|gb|ACG38170.1| photosystem II
reaction center W protein [Zea mays]
Length = 127
Score = 82.0 bits (201), Expect = 7e-14
Identities = 46/88 (52%), Positives = 50/88 (56%), Gaps = 5/88 (5%)
Frame = +3
Query: 12 GLPRLACKGRTVRCSTHEEKXXXXXXXXXXXXXXXXXX-----SPALALVDERMSTEGTG 176
GLP L VRCS ++ PALALVDERMSTEGTG
Sbjct: 25 GLPALRASSERVRCSYAKDAAPVSTKGAGASLLAAAGAVTASAGPALALVDERMSTEGTG 84
Query: 177 LSLGISNNLLAWILLAVFGLIWALYFAY 260
LSLG+SNNLL WILL VFGLIW+LY Y
Sbjct: 85 LSLGLSNNLLGWILLGVFGLIWSLYTIY 112