BLASTX nr result
ID: Zingiber24_contig00001472
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00001472
(549 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY13830.1| Photosystem II subunit R [Theobroma cacao] 171 1e-40
ref|XP_006477999.1| PREDICTED: photosystem II 10 kDa polypeptide... 166 4e-39
ref|XP_006441021.1| hypothetical protein CICLE_v10022793mg [Citr... 164 1e-38
sp|Q40519.1|PSBR_TOBAC RecName: Full=Photosystem II 10 kDa polyp... 164 1e-38
emb|CAA99757.1| photosystem II 10 kD polypeptide [Solanum lycope... 163 2e-38
ref|NP_001234042.1| photosystem II 10 kDa polypeptide, chloropla... 162 4e-38
emb|CAA27989.1| unnamed protein product [Solanum tuberosum] 162 4e-38
ref|XP_002271791.1| PREDICTED: photosystem II 10 kDa polypeptide... 162 4e-38
ref|NP_001275173.1| photosystem II 10 kDa polypeptide, chloropla... 161 8e-38
gb|ABW35320.1| chloroplast photosystem II PsbR [Prosopis juliflora] 161 1e-37
gb|AAN60205.1| photosystem II 10 kDa protein [Xerophyta humilis] 160 2e-37
ref|NP_001235442.1| uncharacterized protein LOC100499745 [Glycin... 159 4e-37
ref|NP_001236219.1| uncharacterized protein LOC100305752 [Glycin... 158 7e-37
gb|ABC46708.1| chloroplast photosystem II 10 kDa protein [Arachi... 157 1e-36
gb|ABK96671.1| unknown [Populus trichocarpa x Populus deltoides] 157 1e-36
gb|ADB93062.1| chloroplast photosystem II 10 kDa polypeptide [Ja... 157 2e-36
gb|ACZ54010.1| chloroplast photosystem II protein [Wolffia arrhiza] 156 3e-36
ref|XP_002529952.1| Photosystem II 10 kDa polypeptide, chloropla... 156 3e-36
gb|ABK96223.1| unknown [Populus trichocarpa x Populus deltoides]... 154 1e-35
ref|XP_002332205.1| predicted protein [Populus trichocarpa] gi|5... 154 1e-35
>gb|EOY13830.1| Photosystem II subunit R [Theobroma cacao]
Length = 138
Score = 171 bits (433), Expect = 1e-40
Identities = 88/123 (71%), Positives = 94/123 (76%)
Frame = -3
Query: 547 ERLRVNGVPALVXXXXXXXRLKVEAKGGKLKTDKPYGINGGMALPSGLDASGRKQKGKGV 368
E+ V GVP+L KVEAKGGK+KTDKPYGINGGM+L GLDASGRK KGKGV
Sbjct: 19 EKSGVRGVPSLARAPSS---FKVEAKGGKIKTDKPYGINGGMSLRGGLDASGRKGKGKGV 75
Query: 367 YQFVDKYGANVDGYSPIYNTDDWSPSGDVYVGGSTGLLIWAVTXXXXXXXXXXLVYNTSA 188
YQFVDKYGANVDGYSPI++T DWSPSGDVYVGGSTGL IWAVT LVYNTSA
Sbjct: 76 YQFVDKYGANVDGYSPIFDTRDWSPSGDVYVGGSTGLAIWAVTLAGILAGGALLVYNTSA 135
Query: 187 LAQ 179
L Q
Sbjct: 136 LVQ 138
>ref|XP_006477999.1| PREDICTED: photosystem II 10 kDa polypeptide, chloroplastic-like
[Citrus sinensis]
Length = 137
Score = 166 bits (419), Expect = 4e-39
Identities = 83/123 (67%), Positives = 91/123 (73%)
Frame = -3
Query: 547 ERLRVNGVPALVXXXXXXXRLKVEAKGGKLKTDKPYGINGGMALPSGLDASGRKQKGKGV 368
E+ G+P+L K+ AKGGK+KTDKPYG+NGGM L GLDASGRK KGKGV
Sbjct: 20 EKSAARGLPSLAKTS-----FKIVAKGGKIKTDKPYGVNGGMDLREGLDASGRKAKGKGV 74
Query: 367 YQFVDKYGANVDGYSPIYNTDDWSPSGDVYVGGSTGLLIWAVTXXXXXXXXXXLVYNTSA 188
YQFVDKYGANVDGYSPIYN +DWSPSGDVY GG+TGL IWAVT LVYNTSA
Sbjct: 75 YQFVDKYGANVDGYSPIYNENDWSPSGDVYTGGATGLAIWAVTLAGLLAGGALLVYNTSA 134
Query: 187 LAQ 179
LAQ
Sbjct: 135 LAQ 137
>ref|XP_006441021.1| hypothetical protein CICLE_v10022793mg [Citrus clementina]
gi|557543283|gb|ESR54261.1| hypothetical protein
CICLE_v10022793mg [Citrus clementina]
Length = 137
Score = 164 bits (416), Expect = 1e-38
Identities = 80/102 (78%), Positives = 84/102 (82%)
Frame = -3
Query: 484 KVEAKGGKLKTDKPYGINGGMALPSGLDASGRKQKGKGVYQFVDKYGANVDGYSPIYNTD 305
K+ AKGGK+KTDKPYGINGGM L GLDASGRK KGKGVYQFVDKYGANVDGYSPIYN +
Sbjct: 36 KIVAKGGKIKTDKPYGINGGMDLREGLDASGRKAKGKGVYQFVDKYGANVDGYSPIYNEN 95
Query: 304 DWSPSGDVYVGGSTGLLIWAVTXXXXXXXXXXLVYNTSALAQ 179
DWSPSGDVY GG+TGL IWAVT LVYNTSALAQ
Sbjct: 96 DWSPSGDVYTGGATGLAIWAVTLAGLLAGGALLVYNTSALAQ 137
>sp|Q40519.1|PSBR_TOBAC RecName: Full=Photosystem II 10 kDa polypeptide, chloroplastic;
Short=PII10; Flags: Precursor gi|22669|emb|CAA49693.1|
NtpII10 [Nicotiana tabacum]
Length = 136
Score = 164 bits (415), Expect = 1e-38
Identities = 85/124 (68%), Positives = 94/124 (75%), Gaps = 1/124 (0%)
Frame = -3
Query: 547 ERLRVNGVPALVXXXXXXXRLKVEAKG-GKLKTDKPYGINGGMALPSGLDASGRKQKGKG 371
E+ V G+P+L +V+A G KLKTDKPYGING M+L G+DASGRKQKGKG
Sbjct: 16 EKTAVKGLPSLARSSSS---FRVQASGVKKLKTDKPYGINGSMSLRDGVDASGRKQKGKG 72
Query: 370 VYQFVDKYGANVDGYSPIYNTDDWSPSGDVYVGGSTGLLIWAVTXXXXXXXXXXLVYNTS 191
VYQFVDKYGANVDGYSPIYNTDDWSPSGDVYVGG+TGL IWAVT LV+NTS
Sbjct: 73 VYQFVDKYGANVDGYSPIYNTDDWSPSGDVYVGGTTGLAIWAVTLVGILAGGALLVFNTS 132
Query: 190 ALAQ 179
ALAQ
Sbjct: 133 ALAQ 136
>emb|CAA99757.1| photosystem II 10 kD polypeptide [Solanum lycopersicum]
Length = 130
Score = 163 bits (413), Expect = 2e-38
Identities = 85/124 (68%), Positives = 94/124 (75%), Gaps = 1/124 (0%)
Frame = -3
Query: 547 ERLRVNGVPALVXXXXXXXRLKVEAKG-GKLKTDKPYGINGGMALPSGLDASGRKQKGKG 371
E++ V G+P+L KV A+G KLKTDKPYGING MAL G+DASGRK KGKG
Sbjct: 10 EKISVKGLPSLTRSSSS---FKVVARGVKKLKTDKPYGINGSMALRDGVDASGRKPKGKG 66
Query: 370 VYQFVDKYGANVDGYSPIYNTDDWSPSGDVYVGGSTGLLIWAVTXXXXXXXXXXLVYNTS 191
VYQ+VDKYGANVDGYSPIYNTD+WSPSGDVYVGG+TGL IWAVT LVYNTS
Sbjct: 67 VYQYVDKYGANVDGYSPIYNTDEWSPSGDVYVGGTTGLAIWAVTLLGILAGGALLVYNTS 126
Query: 190 ALAQ 179
ALAQ
Sbjct: 127 ALAQ 130
>ref|NP_001234042.1| photosystem II 10 kDa polypeptide, chloroplastic [Solanum
lycopersicum] gi|3914471|sp|Q40163.1|PSBR_SOLLC RecName:
Full=Photosystem II 10 kDa polypeptide, chloroplastic;
Flags: Precursor gi|1217642|emb|CAA65231.1| PSII
polypeptide [Solanum lycopersicum]
Length = 138
Score = 162 bits (411), Expect = 4e-38
Identities = 85/124 (68%), Positives = 93/124 (75%), Gaps = 1/124 (0%)
Frame = -3
Query: 547 ERLRVNGVPALVXXXXXXXRLKVEAKG-GKLKTDKPYGINGGMALPSGLDASGRKQKGKG 371
E++ V G+P+L KV A G KLKTDKPYGING MAL G+DASGRK KGKG
Sbjct: 18 EKISVKGLPSLTRSSSS---FKVVASGVKKLKTDKPYGINGSMALRDGVDASGRKPKGKG 74
Query: 370 VYQFVDKYGANVDGYSPIYNTDDWSPSGDVYVGGSTGLLIWAVTXXXXXXXXXXLVYNTS 191
VYQ+VDKYGANVDGYSPIYNTD+WSPSGDVYVGG+TGL IWAVT LVYNTS
Sbjct: 75 VYQYVDKYGANVDGYSPIYNTDEWSPSGDVYVGGTTGLAIWAVTLLGILAGGALLVYNTS 134
Query: 190 ALAQ 179
ALAQ
Sbjct: 135 ALAQ 138
>emb|CAA27989.1| unnamed protein product [Solanum tuberosum]
Length = 138
Score = 162 bits (411), Expect = 4e-38
Identities = 86/124 (69%), Positives = 92/124 (74%), Gaps = 1/124 (0%)
Frame = -3
Query: 547 ERLRVNGVPALVXXXXXXXRLKVEAKG-GKLKTDKPYGINGGMALPSGLDASGRKQKGKG 371
E+ V G+P+L KV A G KLKTDKPYGING MAL GLDASGRK KGKG
Sbjct: 18 EKTSVKGLPSLARSSSP---FKVVASGVKKLKTDKPYGINGSMALRDGLDASGRKPKGKG 74
Query: 370 VYQFVDKYGANVDGYSPIYNTDDWSPSGDVYVGGSTGLLIWAVTXXXXXXXXXXLVYNTS 191
VYQ+VDKYGANVDGYSPIYNTD+WSPSGDVYVGG+TGL IWAVT LVYNTS
Sbjct: 75 VYQYVDKYGANVDGYSPIYNTDEWSPSGDVYVGGTTGLAIWAVTLVGILAGGALLVYNTS 134
Query: 190 ALAQ 179
ALAQ
Sbjct: 135 ALAQ 138
>ref|XP_002271791.1| PREDICTED: photosystem II 10 kDa polypeptide, chloroplastic [Vitis
vinifera] gi|147789486|emb|CAN71762.1| hypothetical
protein VITISV_021149 [Vitis vinifera]
gi|296082806|emb|CBI21811.3| unnamed protein product
[Vitis vinifera]
Length = 139
Score = 162 bits (411), Expect = 4e-38
Identities = 85/124 (68%), Positives = 92/124 (74%), Gaps = 1/124 (0%)
Frame = -3
Query: 547 ERLRVNGVPALVXXXXXXXRLKVEAKGGK-LKTDKPYGINGGMALPSGLDASGRKQKGKG 371
ER V G+P+L +VEA GGK +KTDKPYGI GGM L GLDASGRK KGKG
Sbjct: 19 ERRAVRGLPSLARSSSS---FRVEASGGKKIKTDKPYGIGGGMKLSDGLDASGRKGKGKG 75
Query: 370 VYQFVDKYGANVDGYSPIYNTDDWSPSGDVYVGGSTGLLIWAVTXXXXXXXXXXLVYNTS 191
VYQFVDKYGANVDGYSPIY+ D+WSP GDVYVGG+TGLLIWAVT LVYNTS
Sbjct: 76 VYQFVDKYGANVDGYSPIYSPDEWSPGGDVYVGGTTGLLIWAVTLAGLLLGGALLVYNTS 135
Query: 190 ALAQ 179
ALAQ
Sbjct: 136 ALAQ 139
>ref|NP_001275173.1| photosystem II 10 kDa polypeptide, chloroplastic [Solanum
tuberosum] gi|131399|sp|P06183.1|PSBR_SOLTU RecName:
Full=Photosystem II 10 kDa polypeptide, chloroplastic;
AltName: Full=Light-inducible tissue-specific ST-LS1
protein; Flags: Precursor gi|21489|emb|CAA28450.1|
ST-LS1 protein [Solanum tuberosum]
gi|413968448|gb|AFW90561.1| light inducible
tissue-specific ST-LS1 [Solanum tuberosum]
gi|413968538|gb|AFW90606.1| light inducible
tissue-specific ST-LS1 [Solanum tuberosum]
gi|418730663|gb|AFX66996.1| photosystem II 10 kDa
polypeptide [Solanum tuberosum]
Length = 138
Score = 161 bits (408), Expect = 8e-38
Identities = 85/124 (68%), Positives = 92/124 (74%), Gaps = 1/124 (0%)
Frame = -3
Query: 547 ERLRVNGVPALVXXXXXXXRLKVEAKG-GKLKTDKPYGINGGMALPSGLDASGRKQKGKG 371
E+ V G+P+L KV A G KLKTDKPYGING MAL G+DASGRK KGKG
Sbjct: 18 EKTSVKGLPSLARSSSS---FKVVASGVKKLKTDKPYGINGSMALRDGVDASGRKPKGKG 74
Query: 370 VYQFVDKYGANVDGYSPIYNTDDWSPSGDVYVGGSTGLLIWAVTXXXXXXXXXXLVYNTS 191
VYQ+VDKYGANVDGYSPIYNTD+WSPSGDVYVGG+TGL IWAVT LVYNTS
Sbjct: 75 VYQYVDKYGANVDGYSPIYNTDEWSPSGDVYVGGTTGLAIWAVTLVGILAGGALLVYNTS 134
Query: 190 ALAQ 179
ALAQ
Sbjct: 135 ALAQ 138
>gb|ABW35320.1| chloroplast photosystem II PsbR [Prosopis juliflora]
Length = 139
Score = 161 bits (407), Expect = 1e-37
Identities = 84/124 (67%), Positives = 92/124 (74%), Gaps = 1/124 (0%)
Frame = -3
Query: 547 ERLRVNGVPALVXXXXXXXRLKVEAKGGK-LKTDKPYGINGGMALPSGLDASGRKQKGKG 371
E+ V G+P+L KV A GGK +KTDKPYGINGGM L G+D+SGRK KGKG
Sbjct: 19 EKSAVRGLPSL---SRSSSSFKVVASGGKKIKTDKPYGINGGMNLVEGVDSSGRKGKGKG 75
Query: 370 VYQFVDKYGANVDGYSPIYNTDDWSPSGDVYVGGSTGLLIWAVTXXXXXXXXXXLVYNTS 191
VYQFVDKYG NVDGYSPIYNT+DWSPSGDVYVGG+TGL IWAVT LVYNTS
Sbjct: 76 VYQFVDKYGTNVDGYSPIYNTEDWSPSGDVYVGGTTGLAIWAVTLAGLLAGGALLVYNTS 135
Query: 190 ALAQ 179
ALAQ
Sbjct: 136 ALAQ 139
>gb|AAN60205.1| photosystem II 10 kDa protein [Xerophyta humilis]
Length = 139
Score = 160 bits (404), Expect = 2e-37
Identities = 82/124 (66%), Positives = 94/124 (75%), Gaps = 1/124 (0%)
Frame = -3
Query: 547 ERLRVNGVPALVXXXXXXXRLKVEAKGGK-LKTDKPYGINGGMALPSGLDASGRKQKGKG 371
ER V G+P+LV KV+A GGK +KT PYG GGM LP+GLDASGRKQKGKG
Sbjct: 19 ERSSVKGLPSLVRSSSS---FKVQASGGKKIKTATPYGPGGGMNLPAGLDASGRKQKGKG 75
Query: 370 VYQFVDKYGANVDGYSPIYNTDDWSPSGDVYVGGSTGLLIWAVTXXXXXXXXXXLVYNTS 191
VYQFVDKYGANVDGYSPIY+ D+WSPSGDVYVGG+TGL++WA+T LVY+TS
Sbjct: 76 VYQFVDKYGANVDGYSPIYSPDEWSPSGDVYVGGTTGLIVWAITLAGLLGGGALLVYSTS 135
Query: 190 ALAQ 179
ALAQ
Sbjct: 136 ALAQ 139
>ref|NP_001235442.1| uncharacterized protein LOC100499745 [Glycine max]
gi|255626243|gb|ACU13466.1| unknown [Glycine max]
Length = 139
Score = 159 bits (402), Expect = 4e-37
Identities = 83/124 (66%), Positives = 92/124 (74%), Gaps = 1/124 (0%)
Frame = -3
Query: 547 ERLRVNGVPALVXXXXXXXRLKVEAKGGK-LKTDKPYGINGGMALPSGLDASGRKQKGKG 371
E+ V G+P+L +V A GGK +KTDKPYGINGGMAL G+DASGRK KGKG
Sbjct: 19 EKSSVRGLPSL---SRNSSSFRVVASGGKKIKTDKPYGINGGMALREGVDASGRKGKGKG 75
Query: 370 VYQFVDKYGANVDGYSPIYNTDDWSPSGDVYVGGSTGLLIWAVTXXXXXXXXXXLVYNTS 191
VYQFVDKYGANVDGYSPIY+T DWSP+GDVY GG+TGL IWAVT LVYNTS
Sbjct: 76 VYQFVDKYGANVDGYSPIYDTKDWSPTGDVYAGGTTGLAIWAVTLLGLLAGGALLVYNTS 135
Query: 190 ALAQ 179
ALAQ
Sbjct: 136 ALAQ 139
>ref|NP_001236219.1| uncharacterized protein LOC100305752 [Glycine max]
gi|255626523|gb|ACU13606.1| unknown [Glycine max]
Length = 138
Score = 158 bits (400), Expect = 7e-37
Identities = 81/123 (65%), Positives = 89/123 (72%)
Frame = -3
Query: 547 ERLRVNGVPALVXXXXXXXRLKVEAKGGKLKTDKPYGINGGMALPSGLDASGRKQKGKGV 368
E+ V G+P+L +V A G K+KTDKPYGINGGMAL G DASGRK KGKGV
Sbjct: 19 EKSSVRGLPSL---SRNSSSFRVVASGKKIKTDKPYGINGGMALRDGTDASGRKGKGKGV 75
Query: 367 YQFVDKYGANVDGYSPIYNTDDWSPSGDVYVGGSTGLLIWAVTXXXXXXXXXXLVYNTSA 188
YQFVDKYGANVDGYSPIY+T DWSP+GDVY GG+TGL IWAVT LVYNTSA
Sbjct: 76 YQFVDKYGANVDGYSPIYDTKDWSPTGDVYAGGTTGLAIWAVTLLGLLAGGALLVYNTSA 135
Query: 187 LAQ 179
L Q
Sbjct: 136 LVQ 138
>gb|ABC46708.1| chloroplast photosystem II 10 kDa protein [Arachis hypogaea]
Length = 129
Score = 157 bits (398), Expect = 1e-36
Identities = 83/124 (66%), Positives = 90/124 (72%), Gaps = 1/124 (0%)
Frame = -3
Query: 547 ERLRVNGVPALVXXXXXXXRLKVEAKGGK-LKTDKPYGINGGMALPSGLDASGRKQKGKG 371
ER V G+P+L KV A GGK +KTDKPYGINGGM L GLDASGRK KGKG
Sbjct: 9 ERSSVRGIPSL---SRASSSFKVVASGGKKIKTDKPYGINGGMNLRDGLDASGRKGKGKG 65
Query: 370 VYQFVDKYGANVDGYSPIYNTDDWSPSGDVYVGGSTGLLIWAVTXXXXXXXXXXLVYNTS 191
VYQFVDKYGANVDGYSPIY+ DWSP+GDVY GG+TGL IWAVT LVYNTS
Sbjct: 66 VYQFVDKYGANVDGYSPIYDQKDWSPTGDVYTGGTTGLAIWAVTLVGLLAGGALLVYNTS 125
Query: 190 ALAQ 179
AL+Q
Sbjct: 126 ALSQ 129
>gb|ABK96671.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 136
Score = 157 bits (398), Expect = 1e-36
Identities = 80/123 (65%), Positives = 88/123 (71%)
Frame = -3
Query: 547 ERLRVNGVPALVXXXXXXXRLKVEAKGGKLKTDKPYGINGGMALPSGLDASGRKQKGKGV 368
E+ V G+P L K+EA G K+KTD PYG GGM L GLDASGRK KGKGV
Sbjct: 19 EKSSVRGLPTL-----SRRTFKIEASGVKIKTDTPYGTGGGMNLRDGLDASGRKPKGKGV 73
Query: 367 YQFVDKYGANVDGYSPIYNTDDWSPSGDVYVGGSTGLLIWAVTXXXXXXXXXXLVYNTSA 188
YQ+VDKYGANVDGYSPIYNTD+WSP+GDVY GG TGLLIWAVT LVY+TSA
Sbjct: 74 YQYVDKYGANVDGYSPIYNTDEWSPTGDVYAGGKTGLLIWAVTLAGILAGGALLVYSTSA 133
Query: 187 LAQ 179
LAQ
Sbjct: 134 LAQ 136
>gb|ADB93062.1| chloroplast photosystem II 10 kDa polypeptide [Jatropha curcas]
Length = 137
Score = 157 bits (397), Expect = 2e-36
Identities = 82/124 (66%), Positives = 91/124 (73%), Gaps = 1/124 (0%)
Frame = -3
Query: 547 ERLRVNGVPALVXXXXXXXRLKVEAKGGK-LKTDKPYGINGGMALPSGLDASGRKQKGKG 371
++ V G+P L KVEA GGK +KTDKPYGI GGM L +GLDASGRK GKG
Sbjct: 19 QKSSVRGLPKL-----SRRAFKVEAGGGKKIKTDKPYGIGGGMNLRNGLDASGRKATGKG 73
Query: 370 VYQFVDKYGANVDGYSPIYNTDDWSPSGDVYVGGSTGLLIWAVTXXXXXXXXXXLVYNTS 191
VYQ+VDKYGANVDGYSPIYNTD+WSP+GDVY GG+TGL IWAVT LVYNTS
Sbjct: 74 VYQYVDKYGANVDGYSPIYNTDEWSPTGDVYAGGTTGLAIWAVTLLGILAGGALLVYNTS 133
Query: 190 ALAQ 179
ALAQ
Sbjct: 134 ALAQ 137
>gb|ACZ54010.1| chloroplast photosystem II protein [Wolffia arrhiza]
Length = 138
Score = 156 bits (395), Expect = 3e-36
Identities = 83/123 (67%), Positives = 90/123 (73%), Gaps = 1/123 (0%)
Frame = -3
Query: 544 RLRVNGVPALVXXXXXXXRLKVEAKGGK-LKTDKPYGINGGMALPSGLDASGRKQKGKGV 368
R V G+P+L L V+A GGK +KTD P+GI GGM L GLDASGRK KGKGV
Sbjct: 19 RSPVKGLPSLARPASG---LTVKASGGKKIKTDTPFGIGGGMKLKDGLDASGRKGKGKGV 75
Query: 367 YQFVDKYGANVDGYSPIYNTDDWSPSGDVYVGGSTGLLIWAVTXXXXXXXXXXLVYNTSA 188
YQFVDKYGANVDGYSPIY+ D+WSPSGDVYVGG TGLLIWAVT LVYNTSA
Sbjct: 76 YQFVDKYGANVDGYSPIYSPDEWSPSGDVYVGGKTGLLIWAVTLAGLLAGGALLVYNTSA 135
Query: 187 LAQ 179
LAQ
Sbjct: 136 LAQ 138
>ref|XP_002529952.1| Photosystem II 10 kDa polypeptide, chloroplast precursor, putative
[Ricinus communis] gi|223530550|gb|EEF32429.1|
Photosystem II 10 kDa polypeptide, chloroplast
precursor, putative [Ricinus communis]
Length = 138
Score = 156 bits (395), Expect = 3e-36
Identities = 79/120 (65%), Positives = 89/120 (74%), Gaps = 1/120 (0%)
Frame = -3
Query: 535 VNGVPALVXXXXXXXRLKVEAKGGK-LKTDKPYGINGGMALPSGLDASGRKQKGKGVYQF 359
V G+P L ++EA GGK +KTDKPYGI GGM L +G+DASGRK GKGVYQF
Sbjct: 24 VRGLPTL-----SRRTFRIEASGGKKIKTDKPYGIGGGMELRNGVDASGRKPTGKGVYQF 78
Query: 358 VDKYGANVDGYSPIYNTDDWSPSGDVYVGGSTGLLIWAVTXXXXXXXXXXLVYNTSALAQ 179
VDKYGANVDGYSPIYNTD+WSP+GDVY GG+TGL IWA+T LVYNTSALAQ
Sbjct: 79 VDKYGANVDGYSPIYNTDEWSPTGDVYAGGATGLAIWAITLAGLLAGGALLVYNTSALAQ 138
>gb|ABK96223.1| unknown [Populus trichocarpa x Populus deltoides]
gi|118488997|gb|ABK96306.1| unknown [Populus trichocarpa
x Populus deltoides] gi|118489823|gb|ABK96711.1| unknown
[Populus trichocarpa x Populus deltoides]
Length = 137
Score = 154 bits (390), Expect = 1e-35
Identities = 81/124 (65%), Positives = 88/124 (70%), Gaps = 1/124 (0%)
Frame = -3
Query: 547 ERLRVNGVPALVXXXXXXXRLKVEAKG-GKLKTDKPYGINGGMALPSGLDASGRKQKGKG 371
E+ V G+P L K+EA G K+KTD PYG GGM L GLDASGRK KGKG
Sbjct: 19 EKSSVRGLPTL-----SRRSFKIEASGVKKIKTDTPYGTGGGMNLRDGLDASGRKPKGKG 73
Query: 370 VYQFVDKYGANVDGYSPIYNTDDWSPSGDVYVGGSTGLLIWAVTXXXXXXXXXXLVYNTS 191
VYQ+VDKYGANVDGYSPIYNTD+WSPSGDVY GG TGLLIWAVT LVY+TS
Sbjct: 74 VYQYVDKYGANVDGYSPIYNTDEWSPSGDVYAGGKTGLLIWAVTLAGILAGGALLVYSTS 133
Query: 190 ALAQ 179
ALAQ
Sbjct: 134 ALAQ 137
>ref|XP_002332205.1| predicted protein [Populus trichocarpa]
gi|566154459|ref|XP_006370467.1| polypeptide precursor
of photosystem II family protein [Populus trichocarpa]
gi|550349660|gb|ERP67036.1| polypeptide precursor of
photosystem II family protein [Populus trichocarpa]
Length = 141
Score = 154 bits (389), Expect = 1e-35
Identities = 82/120 (68%), Positives = 88/120 (73%), Gaps = 1/120 (0%)
Frame = -3
Query: 535 VNGVPALVXXXXXXXRLKVEA-KGGKLKTDKPYGINGGMALPSGLDASGRKQKGKGVYQF 359
V G+P L KVEA + K TD+PYGINGGM L G+DASGRK KGKGVYQF
Sbjct: 26 VRGLPTLARRSS----FKVEASRTRKTNTDQPYGINGGMDLREGVDASGRKGKGKGVYQF 81
Query: 358 VDKYGANVDGYSPIYNTDDWSPSGDVYVGGSTGLLIWAVTXXXXXXXXXXLVYNTSALAQ 179
VDKYGANVDGYSPIYNT+DWSPSGDVYVGG TGLLIWAVT LVY+TSALAQ
Sbjct: 82 VDKYGANVDGYSPIYNTNDWSPSGDVYVGGKTGLLIWAVTLAGLLAGGALLVYSTSALAQ 141