BLASTX nr result
ID: Zingiber24_contig00001431
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00001431
(291 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXB81985.1| Chlorophyll a-b binding protein [Morus notabilis] 62 8e-08
gb|EOX99848.1| Chlorophyll a-b binding protein 7, chloroplastic ... 62 8e-08
ref|XP_004135326.1| PREDICTED: chlorophyll a-b binding protein 7... 62 8e-08
gb|AFK45885.1| unknown [Lotus japonicus] 62 8e-08
ref|XP_002303791.1| chlorophyll a/b-binding protein type II prec... 62 8e-08
gb|ABK95601.1| unknown [Populus trichocarpa] 62 8e-08
emb|CAA57492.1| Type II chlorophyll a/b binding protein from pho... 62 1e-07
gb|AGV54335.1| chlorophyll A/B binding protein 7 chloroplastic-l... 62 1e-07
gb|AGV54278.1| light-harvesting complex I protein Lhca2 [Phaseol... 62 1e-07
ref|XP_004510609.1| PREDICTED: chlorophyll a-b binding protein 7... 62 1e-07
ref|XP_006291716.1| hypothetical protein CARUB_v10017882mg [Caps... 62 1e-07
gb|EMJ23914.1| hypothetical protein PRUPE_ppa009903mg [Prunus pe... 62 1e-07
ref|NP_191706.2| photosystem I light harvesting complex protein ... 62 1e-07
ref|NP_198197.1| light-harvesting complex I chlorophyll a/b bind... 62 1e-07
gb|AFK35880.1| unknown [Medicago truncatula] 62 1e-07
ref|XP_003528751.1| PREDICTED: chlorophyll a-b binding protein 7... 62 1e-07
ref|XP_003637475.1| Chlorophyll a-b binding protein [Medicago tr... 62 1e-07
ref|XP_003637339.1| Chlorophyll a-b binding protein [Medicago tr... 62 1e-07
dbj|BAJ34383.1| unnamed protein product [Thellungiella halophila] 62 1e-07
pdb|3LW5|2 Chain 2, Improved Model Of Plant Photosystem I 62 1e-07
>gb|EXB81985.1| Chlorophyll a-b binding protein [Morus notabilis]
Length = 283
Score = 62.0 bits (149), Expect = 8e-08
Identities = 26/30 (86%), Positives = 29/30 (96%)
Frame = -1
Query: 291 VYTGTGPIDNLFSHLADPGHNTVFAAFTPQ 202
+YTGTGPIDNLF+HLADPGH TVFAAFTP+
Sbjct: 254 IYTGTGPIDNLFAHLADPGHATVFAAFTPK 283
>gb|EOX99848.1| Chlorophyll a-b binding protein 7, chloroplastic [Theobroma cacao]
Length = 271
Score = 62.0 bits (149), Expect = 8e-08
Identities = 26/30 (86%), Positives = 29/30 (96%)
Frame = -1
Query: 291 VYTGTGPIDNLFSHLADPGHNTVFAAFTPQ 202
+YTGTGPIDNLF+HLADPGH TVFAAFTP+
Sbjct: 242 IYTGTGPIDNLFAHLADPGHATVFAAFTPK 271
>ref|XP_004135326.1| PREDICTED: chlorophyll a-b binding protein 7, chloroplastic-like
[Cucumis sativus] gi|449529174|ref|XP_004171576.1|
PREDICTED: chlorophyll a-b binding protein 7,
chloroplastic-like [Cucumis sativus]
Length = 271
Score = 62.0 bits (149), Expect = 8e-08
Identities = 26/30 (86%), Positives = 29/30 (96%)
Frame = -1
Query: 291 VYTGTGPIDNLFSHLADPGHNTVFAAFTPQ 202
+YTGTGPIDNLF+HLADPGH TVFAAFTP+
Sbjct: 242 IYTGTGPIDNLFAHLADPGHATVFAAFTPK 271
>gb|AFK45885.1| unknown [Lotus japonicus]
Length = 269
Score = 62.0 bits (149), Expect = 8e-08
Identities = 26/30 (86%), Positives = 29/30 (96%)
Frame = -1
Query: 291 VYTGTGPIDNLFSHLADPGHNTVFAAFTPQ 202
+YTGTGPIDNLF+HLADPGH TVFAAFTP+
Sbjct: 240 IYTGTGPIDNLFAHLADPGHATVFAAFTPK 269
>ref|XP_002303791.1| chlorophyll a/b-binding protein type II precursor [Populus
trichocarpa] gi|222841223|gb|EEE78770.1| chlorophyll
a/b-binding protein type II precursor [Populus
trichocarpa]
Length = 269
Score = 62.0 bits (149), Expect = 8e-08
Identities = 26/30 (86%), Positives = 29/30 (96%)
Frame = -1
Query: 291 VYTGTGPIDNLFSHLADPGHNTVFAAFTPQ 202
+YTGTGPIDNLF+HLADPGH TVFAAFTP+
Sbjct: 240 IYTGTGPIDNLFAHLADPGHATVFAAFTPK 269
>gb|ABK95601.1| unknown [Populus trichocarpa]
Length = 269
Score = 62.0 bits (149), Expect = 8e-08
Identities = 26/30 (86%), Positives = 29/30 (96%)
Frame = -1
Query: 291 VYTGTGPIDNLFSHLADPGHNTVFAAFTPQ 202
+YTGTGPIDNLF+HLADPGH TVFAAFTP+
Sbjct: 240 IYTGTGPIDNLFAHLADPGHATVFAAFTPK 269
>emb|CAA57492.1| Type II chlorophyll a/b binding protein from photosystem I [Pisum
sativum]
Length = 269
Score = 61.6 bits (148), Expect = 1e-07
Identities = 25/30 (83%), Positives = 29/30 (96%)
Frame = -1
Query: 291 VYTGTGPIDNLFSHLADPGHNTVFAAFTPQ 202
+YTGTGPIDNLF+HLADPGH T+FAAFTP+
Sbjct: 240 IYTGTGPIDNLFAHLADPGHATIFAAFTPK 269
>gb|AGV54335.1| chlorophyll A/B binding protein 7 chloroplastic-like protein
[Phaseolus vulgaris]
Length = 269
Score = 61.6 bits (148), Expect = 1e-07
Identities = 25/30 (83%), Positives = 29/30 (96%)
Frame = -1
Query: 291 VYTGTGPIDNLFSHLADPGHNTVFAAFTPQ 202
+YTGTGPIDNLF+HLADPGH T+FAAFTP+
Sbjct: 240 IYTGTGPIDNLFAHLADPGHATIFAAFTPK 269
>gb|AGV54278.1| light-harvesting complex I protein Lhca2 [Phaseolus vulgaris]
Length = 269
Score = 61.6 bits (148), Expect = 1e-07
Identities = 25/30 (83%), Positives = 29/30 (96%)
Frame = -1
Query: 291 VYTGTGPIDNLFSHLADPGHNTVFAAFTPQ 202
+YTGTGPIDNLF+HLADPGH T+FAAFTP+
Sbjct: 240 IYTGTGPIDNLFAHLADPGHATIFAAFTPK 269
>ref|XP_004510609.1| PREDICTED: chlorophyll a-b binding protein 7, chloroplastic-like
isoform X2 [Cicer arietinum]
Length = 268
Score = 61.6 bits (148), Expect = 1e-07
Identities = 25/30 (83%), Positives = 29/30 (96%)
Frame = -1
Query: 291 VYTGTGPIDNLFSHLADPGHNTVFAAFTPQ 202
+YTGTGPIDNLF+HLADPGH T+FAAFTP+
Sbjct: 239 IYTGTGPIDNLFAHLADPGHATIFAAFTPK 268
>ref|XP_006291716.1| hypothetical protein CARUB_v10017882mg [Capsella rubella]
gi|482560423|gb|EOA24614.1| hypothetical protein
CARUB_v10017882mg [Capsella rubella]
Length = 256
Score = 61.6 bits (148), Expect = 1e-07
Identities = 25/30 (83%), Positives = 29/30 (96%)
Frame = -1
Query: 291 VYTGTGPIDNLFSHLADPGHNTVFAAFTPQ 202
+YTGTGPIDNLF+HLADPGH T+FAAFTP+
Sbjct: 227 IYTGTGPIDNLFAHLADPGHATIFAAFTPK 256
>gb|EMJ23914.1| hypothetical protein PRUPE_ppa009903mg [Prunus persica]
Length = 272
Score = 61.6 bits (148), Expect = 1e-07
Identities = 25/30 (83%), Positives = 29/30 (96%)
Frame = -1
Query: 291 VYTGTGPIDNLFSHLADPGHNTVFAAFTPQ 202
+YTGTGPIDNLF+HLADPGH T+FAAFTP+
Sbjct: 243 IYTGTGPIDNLFAHLADPGHATIFAAFTPK 272
>ref|NP_191706.2| photosystem I light harvesting complex protein [Arabidopsis
thaliana] gi|4741940|gb|AAD28767.1|AF134120_1 Lhca2
protein [Arabidopsis thaliana]
gi|15451180|gb|AAK96861.1| Lhca2 protein [Arabidopsis
thaliana] gi|17529286|gb|AAL38870.1| putative Lhca2
protein [Arabidopsis thaliana]
gi|18377464|gb|AAL66898.1| Lhca2 protein [Arabidopsis
thaliana] gi|25083456|gb|AAN72081.1| Lhca2 protein
[Arabidopsis thaliana] gi|332646688|gb|AEE80209.1|
photosystem I light harvesting complex protein
[Arabidopsis thaliana]
Length = 257
Score = 61.6 bits (148), Expect = 1e-07
Identities = 25/30 (83%), Positives = 29/30 (96%)
Frame = -1
Query: 291 VYTGTGPIDNLFSHLADPGHNTVFAAFTPQ 202
+YTGTGPIDNLF+HLADPGH T+FAAFTP+
Sbjct: 228 IYTGTGPIDNLFAHLADPGHATIFAAFTPK 257
>ref|NP_198197.1| light-harvesting complex I chlorophyll a/b binding protein 2
[Arabidopsis thaliana] gi|332006417|gb|AED93800.1|
light-harvesting complex I chlorophyll a/b binding
protein 2 [Arabidopsis thaliana]
Length = 173
Score = 61.6 bits (148), Expect = 1e-07
Identities = 25/30 (83%), Positives = 29/30 (96%)
Frame = -1
Query: 291 VYTGTGPIDNLFSHLADPGHNTVFAAFTPQ 202
+YTGTGPIDNLF+HLADPGH T+FAAFTP+
Sbjct: 144 IYTGTGPIDNLFAHLADPGHATIFAAFTPK 173
>gb|AFK35880.1| unknown [Medicago truncatula]
Length = 268
Score = 61.6 bits (148), Expect = 1e-07
Identities = 25/30 (83%), Positives = 29/30 (96%)
Frame = -1
Query: 291 VYTGTGPIDNLFSHLADPGHNTVFAAFTPQ 202
+YTGTGPIDNLF+HLADPGH T+FAAFTP+
Sbjct: 239 IYTGTGPIDNLFAHLADPGHATIFAAFTPK 268
>ref|XP_003528751.1| PREDICTED: chlorophyll a-b binding protein 7, chloroplastic-like
isoform 1 [Glycine max]
Length = 270
Score = 61.6 bits (148), Expect = 1e-07
Identities = 25/30 (83%), Positives = 29/30 (96%)
Frame = -1
Query: 291 VYTGTGPIDNLFSHLADPGHNTVFAAFTPQ 202
+YTGTGPIDNLF+HLADPGH T+FAAFTP+
Sbjct: 241 IYTGTGPIDNLFAHLADPGHATIFAAFTPK 270
>ref|XP_003637475.1| Chlorophyll a-b binding protein [Medicago truncatula]
gi|355503410|gb|AES84613.1| Chlorophyll a-b binding
protein [Medicago truncatula]
Length = 294
Score = 61.6 bits (148), Expect = 1e-07
Identities = 25/30 (83%), Positives = 29/30 (96%)
Frame = -1
Query: 291 VYTGTGPIDNLFSHLADPGHNTVFAAFTPQ 202
+YTGTGPIDNLF+HLADPGH T+FAAFTP+
Sbjct: 265 IYTGTGPIDNLFAHLADPGHATIFAAFTPK 294
>ref|XP_003637339.1| Chlorophyll a-b binding protein [Medicago truncatula]
gi|355503274|gb|AES84477.1| Chlorophyll a-b binding
protein [Medicago truncatula]
Length = 268
Score = 61.6 bits (148), Expect = 1e-07
Identities = 25/30 (83%), Positives = 29/30 (96%)
Frame = -1
Query: 291 VYTGTGPIDNLFSHLADPGHNTVFAAFTPQ 202
+YTGTGPIDNLF+HLADPGH T+FAAFTP+
Sbjct: 239 IYTGTGPIDNLFAHLADPGHATIFAAFTPK 268
>dbj|BAJ34383.1| unnamed protein product [Thellungiella halophila]
Length = 256
Score = 61.6 bits (148), Expect = 1e-07
Identities = 25/30 (83%), Positives = 29/30 (96%)
Frame = -1
Query: 291 VYTGTGPIDNLFSHLADPGHNTVFAAFTPQ 202
+YTGTGPIDNLF+HLADPGH T+FAAFTP+
Sbjct: 227 IYTGTGPIDNLFAHLADPGHATIFAAFTPK 256
>pdb|3LW5|2 Chain 2, Improved Model Of Plant Photosystem I
Length = 176
Score = 61.6 bits (148), Expect = 1e-07
Identities = 25/30 (83%), Positives = 29/30 (96%)
Frame = -1
Query: 291 VYTGTGPIDNLFSHLADPGHNTVFAAFTPQ 202
+YTGTGPIDNLF+HLADPGH T+FAAFTP+
Sbjct: 147 IYTGTGPIDNLFAHLADPGHATIFAAFTPK 176