BLASTX nr result

ID: Zingiber24_contig00001115 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00001115
         (775 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAC02896.1| tobacco nucleolin [Nicotiana tabacum]                  91   6e-16
ref|XP_006367329.1| PREDICTED: nucleolin 2-like [Solanum tuberosum]    81   3e-13
ref|XP_004297745.1| PREDICTED: uncharacterized protein LOC101292...    79   2e-12
gb|EMJ23407.1| hypothetical protein PRUPE_ppa007807mg [Prunus pe...    77   9e-12
ref|XP_004231484.1| PREDICTED: uncharacterized protein LOC544064...    76   1e-11
ref|XP_002277195.2| PREDICTED: uncharacterized protein LOC100262...    75   2e-11
emb|CBI27136.3| unnamed protein product [Vitis vinifera]               75   2e-11
ref|XP_006652843.1| PREDICTED: nucleolin 2-like [Oryza brachyantha]    74   7e-11
ref|NP_188491.1| protein NUCLEOLIN LIKE 2 [Arabidopsis thaliana]...    73   9e-11
dbj|BAB02219.1| unnamed protein product [Arabidopsis thaliana]         73   9e-11
gb|AAA74208.1| protein localized in the nucleoli of pea nuclei; ...    73   1e-10
ref|XP_002307174.1| nucleolin family protein [Populus trichocarp...    72   2e-10
ref|XP_006836341.1| hypothetical protein AMTR_s00092p00090110 [A...    72   2e-10
ref|XP_002885266.1| hypothetical protein ARALYDRAFT_479366 [Arab...    70   6e-10
ref|XP_002527136.1| nucleic acid binding protein, putative [Rici...    70   6e-10
ref|XP_006380518.1| hypothetical protein POPTR_0007s07800g [Popu...    70   8e-10
ref|XP_006380517.1| hypothetical protein POPTR_0007s07800g [Popu...    70   8e-10
ref|XP_002310655.1| predicted protein [Populus trichocarpa]            70   8e-10
gb|ABK94939.1| unknown [Populus trichocarpa]                           70   8e-10
emb|CAH66982.1| H0714H04.9 [Oryza sativa Indica Group]                 70   1e-09

>dbj|BAC02896.1| tobacco nucleolin [Nicotiana tabacum]
          Length = 620

 Score = 90.5 bits (223), Expect = 6e-16
 Identities = 48/80 (60%), Positives = 57/80 (71%)
 Frame = -1

Query: 241 KPLKTPKKDLDVKMKDANAVSAEKLTATKSENKMNQTPGSRTLFVGNLSFNVGQDDVVEF 62
           KP KTPKKD DV+M DA++  A+K   T       QTPGS+TLFVGNLS++V Q DV  F
Sbjct: 331 KPSKTPKKDADVEMVDADSSKAQKTPITPKA----QTPGSKTLFVGNLSYSVEQADVENF 386

Query: 61  FKEAGEVVEVRLSAAEDGTF 2
           FK+AGEV EVR S  EDG+F
Sbjct: 387 FKDAGEVQEVRFSTHEDGSF 406


>ref|XP_006367329.1| PREDICTED: nucleolin 2-like [Solanum tuberosum]
          Length = 626

 Score = 81.3 bits (199), Expect = 3e-13
 Identities = 46/81 (56%), Positives = 55/81 (67%), Gaps = 1/81 (1%)
 Frame = -1

Query: 241 KPLKTPKKDLDVKMKDANAVSAEKLTATKSENKMNQTPG-SRTLFVGNLSFNVGQDDVVE 65
           KP KTPKK  DV+M DA +  A++   T       QTPG S+TLFVGNLS++V Q DV  
Sbjct: 323 KPSKTPKKGADVEMVDAPSAKAQQTPITPKA----QTPGGSKTLFVGNLSYSVEQADVEN 378

Query: 64  FFKEAGEVVEVRLSAAEDGTF 2
           FFK+AGEV EVR S  EDG+F
Sbjct: 379 FFKDAGEVQEVRFSTHEDGSF 399


>ref|XP_004297745.1| PREDICTED: uncharacterized protein LOC101292789 [Fragaria vesca
           subsp. vesca]
          Length = 601

 Score = 79.0 bits (193), Expect = 2e-12
 Identities = 49/111 (44%), Positives = 65/111 (58%), Gaps = 1/111 (0%)
 Frame = -1

Query: 331 KQNQAKKSTEAPKKXXXXXXXXXXXXXXXEKPLKTPKK-DLDVKMKDANAVSAEKLTATK 155
           K+ +A    +A KK               E+ +KTPKK D DV+M DA + S +K   T 
Sbjct: 279 KKVKADVPAKAAKKESSSDEDEESSDEESEEDVKTPKKKDSDVEMVDAQSKSEKKAPKTP 338

Query: 154 SENKMNQTPGSRTLFVGNLSFNVGQDDVVEFFKEAGEVVEVRLSAAEDGTF 2
           +     +T GS+TLF GNLS+N+ Q DVVEFFK  G+VV+VRLS+  DG F
Sbjct: 339 ATP---ETSGSKTLFAGNLSYNIEQKDVVEFFKNVGQVVDVRLSSDADGNF 386


>gb|EMJ23407.1| hypothetical protein PRUPE_ppa007807mg [Prunus persica]
          Length = 355

 Score = 76.6 bits (187), Expect = 9e-12
 Identities = 45/87 (51%), Positives = 56/87 (64%), Gaps = 7/87 (8%)
 Frame = -1

Query: 241 KPLKTPKK-DLDVKMKDANAVSAEKLTATKSENKMNQTPG------SRTLFVGNLSFNVG 83
           +P KTPKK D DV+M DA++         KSE K  +TP       S+TLFVGNLSFNV 
Sbjct: 56  EPAKTPKKKDTDVEMVDADS---------KSEKKAPKTPATPEATTSKTLFVGNLSFNVE 106

Query: 82  QDDVVEFFKEAGEVVEVRLSAAEDGTF 2
           + DV  FFK+AGE+V+VR +  EDG F
Sbjct: 107 RADVENFFKDAGEIVDVRFTTTEDGVF 133


>ref|XP_004231484.1| PREDICTED: uncharacterized protein LOC544064 [Solanum lycopersicum]
          Length = 632

 Score = 75.9 bits (185), Expect = 1e-11
 Identities = 45/82 (54%), Positives = 55/82 (67%), Gaps = 2/82 (2%)
 Frame = -1

Query: 241 KPLKTPKKD-LDVKMKDANAVSAEKLTATKSENKMNQTPG-SRTLFVGNLSFNVGQDDVV 68
           KP KTPKK   DV+M DA +  A++   T       QTPG S+TLFVGNLS++V Q DV 
Sbjct: 330 KPSKTPKKQGADVEMVDAPSAKAQQTPITPKA----QTPGGSKTLFVGNLSYSVEQADVE 385

Query: 67  EFFKEAGEVVEVRLSAAEDGTF 2
            FFK+AGEV EVR +  EDG+F
Sbjct: 386 NFFKDAGEVQEVRFATHEDGSF 407


>ref|XP_002277195.2| PREDICTED: uncharacterized protein LOC100262769 [Vitis vinifera]
          Length = 664

 Score = 75.5 bits (184), Expect = 2e-11
 Identities = 46/89 (51%), Positives = 59/89 (66%), Gaps = 9/89 (10%)
 Frame = -1

Query: 241 KPLKTPKKD-LDVKMKDANAVSAEKLTATKSENKMNQTP--------GSRTLFVGNLSFN 89
           +P KTPKK+  DV+M DA   +  K T +KS  K  +TP        GS+TLFVGNLSF+
Sbjct: 355 EPSKTPKKNGTDVEMVDAETPA--KQTDSKSGKKAPKTPATPQVESTGSKTLFVGNLSFS 412

Query: 88  VGQDDVVEFFKEAGEVVEVRLSAAEDGTF 2
           V ++DV  FFK+AGEVV+VR S+  DG F
Sbjct: 413 VQKEDVEHFFKDAGEVVDVRFSSDADGRF 441


>emb|CBI27136.3| unnamed protein product [Vitis vinifera]
          Length = 691

 Score = 75.5 bits (184), Expect = 2e-11
 Identities = 46/89 (51%), Positives = 59/89 (66%), Gaps = 9/89 (10%)
 Frame = -1

Query: 241 KPLKTPKKD-LDVKMKDANAVSAEKLTATKSENKMNQTP--------GSRTLFVGNLSFN 89
           +P KTPKK+  DV+M DA   +  K T +KS  K  +TP        GS+TLFVGNLSF+
Sbjct: 401 EPSKTPKKNGTDVEMVDAETPA--KQTDSKSGKKAPKTPATPQVESTGSKTLFVGNLSFS 458

Query: 88  VGQDDVVEFFKEAGEVVEVRLSAAEDGTF 2
           V ++DV  FFK+AGEVV+VR S+  DG F
Sbjct: 459 VQKEDVEHFFKDAGEVVDVRFSSDADGRF 487


>ref|XP_006652843.1| PREDICTED: nucleolin 2-like [Oryza brachyantha]
          Length = 712

 Score = 73.6 bits (179), Expect = 7e-11
 Identities = 47/114 (41%), Positives = 64/114 (56%), Gaps = 4/114 (3%)
 Frame = -1

Query: 331 KQNQAKKSTE-APKKXXXXXXXXXXXXXXXEKPLKTPKKDLDVKMKDANAVSAEKLTATK 155
           KQ QAKK T  A +                ++P+KTPKK        +N  SA KL   +
Sbjct: 383 KQTQAKKQTPVAQESSSSDVSSAEDSDMESDEPVKTPKKKETAASVGSNK-SATKLGHEE 441

Query: 154 SE---NKMNQTPGSRTLFVGNLSFNVGQDDVVEFFKEAGEVVEVRLSAAEDGTF 2
            +   +  NQ  GS+TLFVGNLS++V Q+ V +FF+EAGE+V++R S  EDG F
Sbjct: 442 PKTPASNQNQATGSKTLFVGNLSYSVTQEQVKQFFQEAGEIVDIRFSTFEDGGF 495


>ref|NP_188491.1| protein NUCLEOLIN LIKE 2 [Arabidopsis thaliana]
           gi|122225307|sp|Q1PEP5.1|NUCL2_ARATH RecName:
           Full=Nucleolin 2; AltName: Full=Protein NUCLEOLIN LIKE
           2; Short=AtNUC-L2; AltName: Full=Protein PARALLEL LIKE
           1; Short=AtPARLL1 gi|91806437|gb|ABE65946.1| nucleolin
           [Arabidopsis thaliana] gi|332642601|gb|AEE76122.1|
           nucleolin like 2 [Arabidopsis thaliana]
          Length = 636

 Score = 73.2 bits (178), Expect = 9e-11
 Identities = 39/75 (52%), Positives = 52/75 (69%), Gaps = 1/75 (1%)
 Frame = -1

Query: 223 KKDLDVKMKDANAVSAEKLTATKSENKMNQTPG-SRTLFVGNLSFNVGQDDVVEFFKEAG 47
           KKD DV+M DA     +K  A + +   NQT G S+TLF GNLS+ + + D+  FFKEAG
Sbjct: 353 KKDSDVEMVDAE----QKSNAKQPKTPTNQTQGGSKTLFAGNLSYQIARSDIENFFKEAG 408

Query: 46  EVVEVRLSAAEDGTF 2
           EVV+VRLS+ +DG+F
Sbjct: 409 EVVDVRLSSFDDGSF 423


>dbj|BAB02219.1| unnamed protein product [Arabidopsis thaliana]
          Length = 610

 Score = 73.2 bits (178), Expect = 9e-11
 Identities = 39/75 (52%), Positives = 52/75 (69%), Gaps = 1/75 (1%)
 Frame = -1

Query: 223 KKDLDVKMKDANAVSAEKLTATKSENKMNQTPG-SRTLFVGNLSFNVGQDDVVEFFKEAG 47
           KKD DV+M DA     +K  A + +   NQT G S+TLF GNLS+ + + D+  FFKEAG
Sbjct: 327 KKDSDVEMVDAE----QKSNAKQPKTPTNQTQGGSKTLFAGNLSYQIARSDIENFFKEAG 382

Query: 46  EVVEVRLSAAEDGTF 2
           EVV+VRLS+ +DG+F
Sbjct: 383 EVVDVRLSSFDDGSF 397


>gb|AAA74208.1| protein localized in the nucleoli of pea nuclei; ORF; putative
           [Pisum sativum]
          Length = 611

 Score = 72.8 bits (177), Expect = 1e-10
 Identities = 45/83 (54%), Positives = 56/83 (67%), Gaps = 3/83 (3%)
 Frame = -1

Query: 241 KPLKTP-KKDLDVKMKDANAVS--AEKLTATKSENKMNQTPGSRTLFVGNLSFNVGQDDV 71
           +P KTP KK  DV+M DA+  S  A    AT SEN      GS+TLFVGNLSF+V + D+
Sbjct: 317 EPSKTPQKKTKDVEMIDADKSSKKAPATPATPSENG-----GSKTLFVGNLSFSVQRSDI 371

Query: 70  VEFFKEAGEVVEVRLSAAEDGTF 2
             FF+E GEVV+VRL++ EDG F
Sbjct: 372 ESFFQECGEVVDVRLASDEDGRF 394


>ref|XP_002307174.1| nucleolin family protein [Populus trichocarpa]
           gi|222856623|gb|EEE94170.1| nucleolin family protein
           [Populus trichocarpa]
          Length = 660

 Score = 72.4 bits (176), Expect = 2e-10
 Identities = 42/83 (50%), Positives = 50/83 (60%), Gaps = 3/83 (3%)
 Frame = -1

Query: 241 KPLKTPKK---DLDVKMKDANAVSAEKLTATKSENKMNQTPGSRTLFVGNLSFNVGQDDV 71
           KP KTPKK   D DV+M DA+  S  K   T      ++  GS+TLFVGNLSF V + DV
Sbjct: 348 KPAKTPKKNVMDTDVEMADADMKSYVKTPKTPVTPVTSENAGSKTLFVGNLSFQVERADV 407

Query: 70  VEFFKEAGEVVEVRLSAAEDGTF 2
             FFKEAGEV +VR +   D  F
Sbjct: 408 ENFFKEAGEVADVRFALDADQRF 430


>ref|XP_006836341.1| hypothetical protein AMTR_s00092p00090110 [Amborella trichopoda]
           gi|548838859|gb|ERM99194.1| hypothetical protein
           AMTR_s00092p00090110 [Amborella trichopoda]
          Length = 662

 Score = 72.0 bits (175), Expect = 2e-10
 Identities = 40/86 (46%), Positives = 55/86 (63%), Gaps = 7/86 (8%)
 Frame = -1

Query: 238 PLKTPKKDLDVKMKDANAVSAEKLTATKSENKMNQTP-------GSRTLFVGNLSFNVGQ 80
           P K  KKD DV++K+A+    +K     +E K  +TP        SRTLF+GNLSF++  
Sbjct: 357 PQKKAKKDGDVELKEASQHPDDKKMNATTEKKQPKTPVTPKSGNESRTLFMGNLSFSIET 416

Query: 79  DDVVEFFKEAGEVVEVRLSAAEDGTF 2
            DV EFFK+AGE+V VRL++  DG+F
Sbjct: 417 TDVEEFFKDAGEIVGVRLASHPDGSF 442


>ref|XP_002885266.1| hypothetical protein ARALYDRAFT_479366 [Arabidopsis lyrata subsp.
           lyrata] gi|297331106|gb|EFH61525.1| hypothetical protein
           ARALYDRAFT_479366 [Arabidopsis lyrata subsp. lyrata]
          Length = 564

 Score = 70.5 bits (171), Expect = 6e-10
 Identities = 37/74 (50%), Positives = 47/74 (63%)
 Frame = -1

Query: 223 KKDLDVKMKDANAVSAEKLTATKSENKMNQTPGSRTLFVGNLSFNVGQDDVVEFFKEAGE 44
           KKD D++M DA   S  K   T +        GS+TLF GNLSF + + D+  FFKEAGE
Sbjct: 282 KKDSDIEMVDAEQKSNAKQPKTPTTETQG---GSKTLFAGNLSFQIKRSDIENFFKEAGE 338

Query: 43  VVEVRLSAAEDGTF 2
           VV+VR S+ +DGTF
Sbjct: 339 VVDVRFSSYDDGTF 352


>ref|XP_002527136.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223533496|gb|EEF35238.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 642

 Score = 70.5 bits (171), Expect = 6e-10
 Identities = 42/81 (51%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
 Frame = -1

Query: 241 KPLKTPKK-DLDVKMKDANAVSAEKLTATKSENKMNQTPGSRTLFVGNLSFNVGQDDVVE 65
           KP KTPKK D DVKM DA   +  K   T    ++  T GS+TLFVGNL F V + DV +
Sbjct: 347 KPSKTPKKKDTDVKMVDATPQATTKKPKTPVTPQVQST-GSKTLFVGNLPFQVERADVED 405

Query: 64  FFKEAGEVVEVRLSAAEDGTF 2
           FFK AGEVV+VR +  +D  F
Sbjct: 406 FFKGAGEVVDVRFALDQDQRF 426


>ref|XP_006380518.1| hypothetical protein POPTR_0007s07800g [Populus trichocarpa]
           gi|550334370|gb|ERP58315.1| hypothetical protein
           POPTR_0007s07800g [Populus trichocarpa]
          Length = 590

 Score = 70.1 bits (170), Expect = 8e-10
 Identities = 41/81 (50%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
 Frame = -1

Query: 241 KPLKTPKK-DLDVKMKDANAVSAEKLTATKSENKMNQTPGSRTLFVGNLSFNVGQDDVVE 65
           KP KTPKK D DV+M DA+  S  K   T      ++  GS+TLFVGNLSF V + DV  
Sbjct: 299 KPAKTPKKNDTDVEMVDADIKSDVKTPKTPVTPVAHENTGSKTLFVGNLSFQVERADVEN 358

Query: 64  FFKEAGEVVEVRLSAAEDGTF 2
           FFK AGEV +VR +   D  F
Sbjct: 359 FFKGAGEVADVRFALDADERF 379


>ref|XP_006380517.1| hypothetical protein POPTR_0007s07800g [Populus trichocarpa]
           gi|550334369|gb|ERP58314.1| hypothetical protein
           POPTR_0007s07800g [Populus trichocarpa]
          Length = 548

 Score = 70.1 bits (170), Expect = 8e-10
 Identities = 41/81 (50%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
 Frame = -1

Query: 241 KPLKTPKK-DLDVKMKDANAVSAEKLTATKSENKMNQTPGSRTLFVGNLSFNVGQDDVVE 65
           KP KTPKK D DV+M DA+  S  K   T      ++  GS+TLFVGNLSF V + DV  
Sbjct: 257 KPAKTPKKNDTDVEMVDADIKSDVKTPKTPVTPVAHENTGSKTLFVGNLSFQVERADVEN 316

Query: 64  FFKEAGEVVEVRLSAAEDGTF 2
           FFK AGEV +VR +   D  F
Sbjct: 317 FFKGAGEVADVRFALDADERF 337


>ref|XP_002310655.1| predicted protein [Populus trichocarpa]
          Length = 548

 Score = 70.1 bits (170), Expect = 8e-10
 Identities = 41/81 (50%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
 Frame = -1

Query: 241 KPLKTPKK-DLDVKMKDANAVSAEKLTATKSENKMNQTPGSRTLFVGNLSFNVGQDDVVE 65
           KP KTPKK D DV+M DA+  S  K   T      ++  GS+TLFVGNLSF V + DV  
Sbjct: 257 KPAKTPKKNDTDVEMVDADIKSDVKTPKTPVTPVAHENTGSKTLFVGNLSFQVERADVEN 316

Query: 64  FFKEAGEVVEVRLSAAEDGTF 2
           FFK AGEV +VR +   D  F
Sbjct: 317 FFKGAGEVADVRFALDADERF 337


>gb|ABK94939.1| unknown [Populus trichocarpa]
          Length = 590

 Score = 70.1 bits (170), Expect = 8e-10
 Identities = 41/81 (50%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
 Frame = -1

Query: 241 KPLKTPKK-DLDVKMKDANAVSAEKLTATKSENKMNQTPGSRTLFVGNLSFNVGQDDVVE 65
           KP KTPKK D DV+M DA+  S  K   T      ++  GS+TLFVGNLSF V + DV  
Sbjct: 299 KPAKTPKKNDTDVEMVDADIKSDVKTPKTPVTPVAHENTGSKTLFVGNLSFQVERADVEN 358

Query: 64  FFKEAGEVVEVRLSAAEDGTF 2
           FFK AGEV +VR +   D  F
Sbjct: 359 FFKGAGEVADVRFALDADERF 379


>emb|CAH66982.1| H0714H04.9 [Oryza sativa Indica Group]
          Length = 704

 Score = 69.7 bits (169), Expect = 1e-09
 Identities = 46/115 (40%), Positives = 62/115 (53%), Gaps = 5/115 (4%)
 Frame = -1

Query: 331 KQNQAKK--STEAPKKXXXXXXXXXXXXXXXEKPLKTPKKDLDVKMKDANAVSAEKLTAT 158
           KQ QAKK  +  A +                ++P KTP+K        +N  SA KL   
Sbjct: 372 KQTQAKKVQAPVAQESSSSDESSEEDSDMESDEPAKTPQKKETAVSVGSNK-SATKLGQE 430

Query: 157 KSE---NKMNQTPGSRTLFVGNLSFNVGQDDVVEFFKEAGEVVEVRLSAAEDGTF 2
           + +   +  NQ  GS+TLFVGNL +NV Q+ V +FF+EAGEVV++R S  EDG F
Sbjct: 431 EPKTPASNQNQATGSKTLFVGNLPYNVEQEQVKQFFQEAGEVVDIRFSTFEDGNF 485


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