BLASTX nr result

ID: Zingiber24_contig00001009 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00001009
         (599 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001174118.1| Os04g0644501 [Oryza sativa Japonica Group] g...    58   2e-06

>ref|NP_001174118.1| Os04g0644501 [Oryza sativa Japonica Group]
           gi|38344892|emb|CAE01545.2| OSJNBa0033G05.16 [Oryza
           sativa Japonica Group] gi|125591836|gb|EAZ32186.1|
           hypothetical protein OsJ_16392 [Oryza sativa Japonica
           Group] gi|255675829|dbj|BAH92846.1| Os04g0644501 [Oryza
           sativa Japonica Group]
          Length = 89

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 34/92 (36%), Positives = 42/92 (45%), Gaps = 2/92 (2%)
 Frame = -2

Query: 427 PANPFCP--GAKAAACXXXXXXXXXXXXXGAPPSPLTECXXXXXXXXXXXXXXXXXXXVK 254
           P NPFCP    K  AC                    ++C                   +K
Sbjct: 2   PVNPFCPWDAVKFGACAGVLGVVGVQAGAHLG----SKCCALVDGLAAAEAAACFCTTIK 57

Query: 253 ESVLGITAKWTVALSVLLSSCKKEIPDGFKCV 158
           ESVLGI  +WTV +SVL+S+CK E+PDGFKCV
Sbjct: 58  ESVLGIPTEWTVGVSVLVSTCKTELPDGFKCV 89


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