BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00000906
         (723 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276964.1| PREDICTED: peptide deformylase 1B, chloropla...   293   4e-77
ref|XP_002521451.1| polypeptide deformylase, putative [Ricinus c...   288   1e-75
ref|XP_002300047.2| hypothetical protein POPTR_0001s35190g [Popu...   287   3e-75
ref|XP_004306350.1| PREDICTED: peptide deformylase 1B, chloropla...   284   2e-74
gb|EMJ17002.1| hypothetical protein PRUPE_ppa009947mg [Prunus pe...   283   4e-74
ref|XP_006369928.1| hypothetical protein POPTR_0001s35190g [Popu...   282   9e-74
gb|EOY02424.1| Polypeptide deformylase, putative isoform 1 [Theo...   281   1e-73
ref|XP_004158319.1| PREDICTED: peptide deformylase 1B, chloropla...   281   1e-73
ref|XP_006840722.1| hypothetical protein AMTR_s00096p00105910 [A...   277   2e-72
ref|XP_006470303.1| PREDICTED: peptide deformylase 1B, chloropla...   277   3e-72
gb|EOY02428.1| Polypeptide deformylase, putative isoform 5 [Theo...   277   3e-72
ref|XP_006446529.1| hypothetical protein CICLE_v10016231mg [Citr...   275   8e-72
gb|EXC20304.1| Peptide deformylase 1B [Morus notabilis]               267   3e-69
ref|XP_006338575.1| PREDICTED: peptide deformylase 1B, chloropla...   266   7e-69
dbj|BAJ91971.1| predicted protein [Hordeum vulgare subsp. vulgare]    265   9e-69
ref|NP_001043669.1| Os01g0637600 [Oryza sativa Japonica Group] g...   265   1e-68
gb|EEE55058.1| hypothetical protein OsJ_02762 [Oryza sativa Japo...   265   1e-68
ref|XP_002458212.1| hypothetical protein SORBIDRAFT_03g029040 [S...   264   2e-68
ref|XP_004969271.1| PREDICTED: peptide deformylase 1B, chloropla...   263   3e-68
ref|NP_001234441.1| peptide deformylase 1B, chloroplastic [Solan...   263   3e-68

>ref|XP_002276964.1| PREDICTED: peptide deformylase 1B, chloroplastic [Vitis vinifera]
           gi|296087647|emb|CBI34903.3| unnamed protein product
           [Vitis vinifera]
          Length = 275

 Score =  293 bits (750), Expect = 4e-77
 Identities = 140/181 (77%), Positives = 159/181 (87%)
 Frame = +1

Query: 181 PFADVSVQARRGPSSQVEDLASPADLCFESPLKIVEYPDPILRARNKRISAFDENLRKLV 360
           P   V VQA+RG S + E +ASPADL FE+PLKIVEYPDPILRA+NK IS FD+NL+KLV
Sbjct: 52  PLMQVQVQAKRGFSFKEEVIASPADLSFEAPLKIVEYPDPILRAKNKLISTFDDNLKKLV 111

Query: 361 DEMFDIMYKTDGVGLSAPQVGVNVQLMVFNPAGERGEGEEIVLVNPKMYKASTRTFFYNE 540
           DEMFD+MYKTDG+GLSAPQVG+NVQLMVFNP GERGEGEEIVLVNP++ K S +   +NE
Sbjct: 112 DEMFDVMYKTDGIGLSAPQVGINVQLMVFNPVGERGEGEEIVLVNPRVNKYSKKIVLFNE 171

Query: 541 GCLSFPGIYADVERPASIKVDARDINGARFRVNLSGLPARIFQHEFDHLQGILFFDRMTE 720
           GCLSFPGIYADVERP S+K+DARDI GARF +NLSGLPAR+FQHEFDHLQG LFFDRMTE
Sbjct: 172 GCLSFPGIYADVERPESVKIDARDITGARFMINLSGLPARVFQHEFDHLQGTLFFDRMTE 231

Query: 721 D 723
           +
Sbjct: 232 E 232


>ref|XP_002521451.1| polypeptide deformylase, putative [Ricinus communis]
           gi|223539350|gb|EEF40941.1| polypeptide deformylase,
           putative [Ricinus communis]
          Length = 282

 Score =  288 bits (737), Expect = 1e-75
 Identities = 136/192 (70%), Positives = 162/192 (84%)
 Frame = +1

Query: 148 SSQPLAVVRDSPFADVSVQARRGPSSQVEDLASPADLCFESPLKIVEYPDPILRARNKRI 327
           S+   + +   P   V  QA+R  S + E++A+PADLCFE PLKIVEYPDPILR +NKRI
Sbjct: 48  STARFSSIAKPPSIPVRAQAKRSFSFKEEEIATPADLCFEEPLKIVEYPDPILRRKNKRI 107

Query: 328 SAFDENLRKLVDEMFDIMYKTDGVGLSAPQVGVNVQLMVFNPAGERGEGEEIVLVNPKMY 507
             FD+NL+KLVDEMFD+MYKTDG+GLSAPQVG+NVQLMVFNP GERGEGEEIVL+NP++ 
Sbjct: 108 DTFDDNLKKLVDEMFDVMYKTDGIGLSAPQVGINVQLMVFNPVGERGEGEEIVLINPRLN 167

Query: 508 KASTRTFFYNEGCLSFPGIYADVERPASIKVDARDINGARFRVNLSGLPARIFQHEFDHL 687
           K S +   +NEGCLSFPGIYADV RP S+K+DARDINGARF VNLSGLPAR+FQHE+DHL
Sbjct: 168 KYSKKIVPFNEGCLSFPGIYADVLRPESVKIDARDINGARFTVNLSGLPARVFQHEYDHL 227

Query: 688 QGILFFDRMTED 723
           +GILFFDRMT++
Sbjct: 228 EGILFFDRMTDE 239


>ref|XP_002300047.2| hypothetical protein POPTR_0001s35190g [Populus trichocarpa]
           gi|566152890|ref|XP_006369926.1| hypothetical protein
           POPTR_0001s35190g [Populus trichocarpa]
           gi|566152892|ref|XP_006369927.1| hypothetical protein
           POPTR_0001s35190g [Populus trichocarpa]
           gi|550348928|gb|EEE84852.2| hypothetical protein
           POPTR_0001s35190g [Populus trichocarpa]
           gi|550348929|gb|ERP66495.1| hypothetical protein
           POPTR_0001s35190g [Populus trichocarpa]
           gi|550348930|gb|ERP66496.1| hypothetical protein
           POPTR_0001s35190g [Populus trichocarpa]
          Length = 268

 Score =  287 bits (734), Expect = 3e-75
 Identities = 144/220 (65%), Positives = 174/220 (79%), Gaps = 8/220 (3%)
 Frame = +1

Query: 88  SSCFPRSFPFPYSGAALRGFSSQPLAVVRDS--------PFADVSVQARRGPSSQVEDLA 243
           SS   R+   PY  +  +    +P+ + R S        P   V  QA+RGP  + + +A
Sbjct: 7   SSSLSRALLLPYLHSRTQTLC-EPIRLARFSSTMKQPRPPSLFVRSQAKRGPFLKQDQVA 65

Query: 244 SPADLCFESPLKIVEYPDPILRARNKRISAFDENLRKLVDEMFDIMYKTDGVGLSAPQVG 423
           + +DL FE+PLKIVEYPDPILRA+NKRI +FD+NL+KLVDEMFD+MYKTDG+GLSAPQVG
Sbjct: 66  ATSDLEFEAPLKIVEYPDPILRAKNKRIDSFDDNLKKLVDEMFDVMYKTDGIGLSAPQVG 125

Query: 424 VNVQLMVFNPAGERGEGEEIVLVNPKMYKASTRTFFYNEGCLSFPGIYADVERPASIKVD 603
           +NVQLMVFNPA E GEG+EIVLVNP++ K S +T  +NEGCLSFPGIYADV+RP S+K+D
Sbjct: 126 INVQLMVFNPADEHGEGDEIVLVNPRVNKYSKKTVLFNEGCLSFPGIYADVKRPESVKID 185

Query: 604 ARDINGARFRVNLSGLPARIFQHEFDHLQGILFFDRMTED 723
           ARDINGARF VNLSGLPAR+FQHEFDHLQGILFFDRMTE+
Sbjct: 186 ARDINGARFTVNLSGLPARVFQHEFDHLQGILFFDRMTEE 225


>ref|XP_004306350.1| PREDICTED: peptide deformylase 1B, chloroplastic-like [Fragaria
           vesca subsp. vesca]
          Length = 275

 Score =  284 bits (726), Expect = 2e-74
 Identities = 137/192 (71%), Positives = 164/192 (85%)
 Frame = +1

Query: 145 FSSQPLAVVRDSPFADVSVQARRGPSSQVEDLASPADLCFESPLKIVEYPDPILRARNKR 324
           FSS    +   + F  V  QA+RG S + + +AS AD+ FE+PL+IVEYPDPILRA+NKR
Sbjct: 38  FSSADRPLSTANRFTAVRAQAKRGFSLKEDQVASAADVEFETPLEIVEYPDPILRAKNKR 97

Query: 325 ISAFDENLRKLVDEMFDIMYKTDGVGLSAPQVGVNVQLMVFNPAGERGEGEEIVLVNPKM 504
           +  FD+NL+KLV+EMFDIMY+TDG+GLSAPQVG+NVQLMVFNP GERGEGEEIVLVNP++
Sbjct: 98  LDTFDDNLKKLVEEMFDIMYRTDGIGLSAPQVGINVQLMVFNPVGERGEGEEIVLVNPRV 157

Query: 505 YKASTRTFFYNEGCLSFPGIYADVERPASIKVDARDINGARFRVNLSGLPARIFQHEFDH 684
            + S +T  +NEGCLSFPGIYADV+RP S+K+DARDI+GARF VNLSGLPAR+FQHEFDH
Sbjct: 158 SRYSQKTRLFNEGCLSFPGIYADVQRPESVKIDARDISGARFTVNLSGLPARVFQHEFDH 217

Query: 685 LQGILFFDRMTE 720
           LQGILFFDRMTE
Sbjct: 218 LQGILFFDRMTE 229


>gb|EMJ17002.1| hypothetical protein PRUPE_ppa009947mg [Prunus persica]
          Length = 271

 Score =  283 bits (724), Expect = 4e-74
 Identities = 143/202 (70%), Positives = 166/202 (82%)
 Frame = +1

Query: 115 FPYSGAALRGFSSQPLAVVRDSPFADVSVQARRGPSSQVEDLASPADLCFESPLKIVEYP 294
           FP     L  FSS    V   +    V  QA+RG S + +++A+ AD+ FE+PLKIVEYP
Sbjct: 26  FPPIFHRLTRFSSTVRLVSTMNRSTPVHAQAKRGFSVKEDEVATAADVEFETPLKIVEYP 85

Query: 295 DPILRARNKRISAFDENLRKLVDEMFDIMYKTDGVGLSAPQVGVNVQLMVFNPAGERGEG 474
           DPILRA+NKRI +FDENL+ LVDEMFDIMYKTDG+GLSAPQVG+NVQLMVFNP GERGEG
Sbjct: 86  DPILRAKNKRIDSFDENLKILVDEMFDIMYKTDGIGLSAPQVGINVQLMVFNPVGERGEG 145

Query: 475 EEIVLVNPKMYKASTRTFFYNEGCLSFPGIYADVERPASIKVDARDINGARFRVNLSGLP 654
           EEIVLVNP++ + S +T  +NEGCLSFPGIYADV RP S+K+DARDINGARF VNLSGLP
Sbjct: 146 EEIVLVNPRVSRYSQKTRPFNEGCLSFPGIYADVVRPESVKIDARDINGARFTVNLSGLP 205

Query: 655 ARIFQHEFDHLQGILFFDRMTE 720
           AR+FQHEFDHLQGILFFDRM+E
Sbjct: 206 ARVFQHEFDHLQGILFFDRMSE 227


>ref|XP_006369928.1| hypothetical protein POPTR_0001s35190g [Populus trichocarpa]
           gi|550348931|gb|ERP66497.1| hypothetical protein
           POPTR_0001s35190g [Populus trichocarpa]
          Length = 269

 Score =  282 bits (721), Expect = 9e-74
 Identities = 144/221 (65%), Positives = 173/221 (78%), Gaps = 9/221 (4%)
 Frame = +1

Query: 88  SSCFPRSFPFPYSGAALRGFSSQPLAVVRDS--------PFADVSVQARRGPSSQVEDLA 243
           SS   R+   PY  +  +    +P+ + R S        P   V  QA+RGP  + + +A
Sbjct: 7   SSSLSRALLLPYLHSRTQTLC-EPIRLARFSSTMKQPRPPSLFVRSQAKRGPFLKQDQVA 65

Query: 244 SPA-DLCFESPLKIVEYPDPILRARNKRISAFDENLRKLVDEMFDIMYKTDGVGLSAPQV 420
           +   DL FE+PLKIVEYPDPILRA+NKRI +FD+NL+KLVDEMFD+MYKTDG+GLSAPQV
Sbjct: 66  ATTGDLEFEAPLKIVEYPDPILRAKNKRIDSFDDNLKKLVDEMFDVMYKTDGIGLSAPQV 125

Query: 421 GVNVQLMVFNPAGERGEGEEIVLVNPKMYKASTRTFFYNEGCLSFPGIYADVERPASIKV 600
           G+NVQLMVFNPA E GEG+EIVLVNP++ K S +T  +NEGCLSFPGIYADV+RP S+K+
Sbjct: 126 GINVQLMVFNPADEHGEGDEIVLVNPRVNKYSKKTVLFNEGCLSFPGIYADVKRPESVKI 185

Query: 601 DARDINGARFRVNLSGLPARIFQHEFDHLQGILFFDRMTED 723
           DARDINGARF VNLSGLPAR+FQHEFDHLQGILFFDRMTE+
Sbjct: 186 DARDINGARFTVNLSGLPARVFQHEFDHLQGILFFDRMTEE 226


>gb|EOY02424.1| Polypeptide deformylase, putative isoform 1 [Theobroma cacao]
           gi|508710528|gb|EOY02425.1| Polypeptide deformylase,
           putative isoform 1 [Theobroma cacao]
           gi|508710529|gb|EOY02426.1| Polypeptide deformylase,
           putative isoform 1 [Theobroma cacao]
           gi|508710530|gb|EOY02427.1| Polypeptide deformylase,
           putative isoform 1 [Theobroma cacao]
          Length = 278

 Score =  281 bits (720), Expect = 1e-73
 Identities = 138/175 (78%), Positives = 154/175 (88%)
 Frame = +1

Query: 193 VSVQARRGPSSQVEDLASPADLCFESPLKIVEYPDPILRARNKRISAFDENLRKLVDEMF 372
           V  QA+RG  S+ +++AS  DL F+SPLKIVEYPDPILR RNKRI  FDENL+KLVDEMF
Sbjct: 59  VHAQAKRGFLSKDDEVASMEDLRFDSPLKIVEYPDPILRKRNKRIDTFDENLKKLVDEMF 118

Query: 373 DIMYKTDGVGLSAPQVGVNVQLMVFNPAGERGEGEEIVLVNPKMYKASTRTFFYNEGCLS 552
           D+MYKTDG+GLSAPQVGVNVQLMVFNP GERGEG+EIVLVNP++ K S +T  +NEGCLS
Sbjct: 119 DVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGQEIVLVNPRVNKYSKKTVLFNEGCLS 178

Query: 553 FPGIYADVERPASIKVDARDINGARFRVNLSGLPARIFQHEFDHLQGILFFDRMT 717
           FP IYADVERP SIK+DARD+NGARF VNLSGL ARIFQHEFDHLQGILFFDRMT
Sbjct: 179 FPRIYADVERPESIKIDARDVNGARFTVNLSGLRARIFQHEFDHLQGILFFDRMT 233


>ref|XP_004158319.1| PREDICTED: peptide deformylase 1B, chloroplastic-like [Cucumis
           sativus]
          Length = 273

 Score =  281 bits (720), Expect = 1e-73
 Identities = 142/200 (71%), Positives = 163/200 (81%), Gaps = 4/200 (2%)
 Frame = +1

Query: 136 LRGFSSQPLAVVRDSPFADVSV----QARRGPSSQVEDLASPADLCFESPLKIVEYPDPI 303
           L GFSS        S F   S     QA+RG S++ +D+AS  DL FE+PLKIVEYPDPI
Sbjct: 32  LSGFSSTCKLFSHSSKFKAPSTLVYAQAKRGFSAKEDDVASSVDLEFEAPLKIVEYPDPI 91

Query: 304 LRARNKRISAFDENLRKLVDEMFDIMYKTDGVGLSAPQVGVNVQLMVFNPAGERGEGEEI 483
           LRA+NKRI +FD+NL+KLV EMFD+MYKTDG+GLSAPQVGVNVQLMVFN  GERGEGEEI
Sbjct: 92  LRAKNKRIGSFDDNLKKLVQEMFDVMYKTDGIGLSAPQVGVNVQLMVFNSVGERGEGEEI 151

Query: 484 VLVNPKMYKASTRTFFYNEGCLSFPGIYADVERPASIKVDARDINGARFRVNLSGLPARI 663
           VLVNPK+Y+ S +T  +NEGCLSFP IYADVERP SIK+DARDI+G RF VNLSGL AR+
Sbjct: 152 VLVNPKVYRYSKKTVLFNEGCLSFPMIYADVERPESIKIDARDISGTRFMVNLSGLSARV 211

Query: 664 FQHEFDHLQGILFFDRMTED 723
           FQHEFDHLQG LFFDRMT++
Sbjct: 212 FQHEFDHLQGTLFFDRMTDE 231


>ref|XP_006840722.1| hypothetical protein AMTR_s00096p00105910 [Amborella trichopoda]
           gi|548842467|gb|ERN02397.1| hypothetical protein
           AMTR_s00096p00105910 [Amborella trichopoda]
          Length = 273

 Score =  277 bits (709), Expect = 2e-72
 Identities = 129/175 (73%), Positives = 155/175 (88%)
 Frame = +1

Query: 199 VQARRGPSSQVEDLASPADLCFESPLKIVEYPDPILRARNKRISAFDENLRKLVDEMFDI 378
           +QARR    + + +A+PADL +E+PLKIVEYPDP LR RNKR+S FDENL++LV EMFD+
Sbjct: 56  MQARREFCLEEDGIATPADLSYEAPLKIVEYPDPRLRVRNKRVSVFDENLKELVAEMFDV 115

Query: 379 MYKTDGVGLSAPQVGVNVQLMVFNPAGERGEGEEIVLVNPKMYKASTRTFFYNEGCLSFP 558
           MYKTDG+GLSAPQVG+NVQLMVFNPAGERGEGEE+VL+NPK+YK S +   ++EGCLSFP
Sbjct: 116 MYKTDGIGLSAPQVGINVQLMVFNPAGERGEGEELVLINPKVYKYSKKLVLFDEGCLSFP 175

Query: 559 GIYADVERPASIKVDARDINGARFRVNLSGLPARIFQHEFDHLQGILFFDRMTED 723
           GIYADVERP S+K+DARDI GA+F V+L GLPAR+FQHEFDHLQGILFF+RMTE+
Sbjct: 176 GIYADVERPTSVKIDARDITGAKFSVHLKGLPARVFQHEFDHLQGILFFERMTEE 230


>ref|XP_006470303.1| PREDICTED: peptide deformylase 1B, chloroplastic-like isoform X1
           [Citrus sinensis] gi|568832146|ref|XP_006470304.1|
           PREDICTED: peptide deformylase 1B, chloroplastic-like
           isoform X2 [Citrus sinensis]
           gi|568832148|ref|XP_006470305.1| PREDICTED: peptide
           deformylase 1B, chloroplastic-like isoform X3 [Citrus
           sinensis]
          Length = 282

 Score =  277 bits (708), Expect = 3e-72
 Identities = 133/172 (77%), Positives = 152/172 (88%)
 Frame = +1

Query: 208 RRGPSSQVEDLASPADLCFESPLKIVEYPDPILRARNKRISAFDENLRKLVDEMFDIMYK 387
           R G S++ + +ASPADL FE PLKIVEYPDPILRA+NKRI  FD+NL+KLVDEMFD MYK
Sbjct: 68  RYGFSTKEDPVASPADLRFERPLKIVEYPDPILRAKNKRIDTFDDNLKKLVDEMFDFMYK 127

Query: 388 TDGVGLSAPQVGVNVQLMVFNPAGERGEGEEIVLVNPKMYKASTRTFFYNEGCLSFPGIY 567
           TDG+GLSAPQVG+NVQLMVFNP GERGEGEEIVLVNP++ K S +   Y EGCLSFPGI+
Sbjct: 128 TDGIGLSAPQVGINVQLMVFNPVGERGEGEEIVLVNPRVNKYSNKMIPYEEGCLSFPGIH 187

Query: 568 ADVERPASIKVDARDINGARFRVNLSGLPARIFQHEFDHLQGILFFDRMTED 723
           ADVERP S+K+DARDINGARF V+LS LPAR+FQHEFDHLQGILFF+RMT+D
Sbjct: 188 ADVERPESVKIDARDINGARFSVSLSDLPARVFQHEFDHLQGILFFERMTDD 239


>gb|EOY02428.1| Polypeptide deformylase, putative isoform 5 [Theobroma cacao]
          Length = 279

 Score =  277 bits (708), Expect = 3e-72
 Identities = 138/176 (78%), Positives = 154/176 (87%), Gaps = 1/176 (0%)
 Frame = +1

Query: 193 VSVQARRGPSSQVEDLASPADLCFESPLKIVEYPDPILRARNKRISAFDENLRKLVDEMF 372
           V  QA+RG  S+ +++AS  DL F+SPLKIVEYPDPILR RNKRI  FDENL+KLVDEMF
Sbjct: 59  VHAQAKRGFLSKDDEVASMEDLRFDSPLKIVEYPDPILRKRNKRIDTFDENLKKLVDEMF 118

Query: 373 DIMYKTDGVGLSAPQVGVNVQLMVFNPAGERGEGEEIVLVNPKMYKASTRTFFYNEGCLS 552
           D+MYKTDG+GLSAPQVGVNVQLMVFNP GERGEG+EIVLVNP++ K S +T  +NEGCLS
Sbjct: 119 DVMYKTDGIGLSAPQVGVNVQLMVFNPVGERGEGQEIVLVNPRVNKYSKKTVLFNEGCLS 178

Query: 553 FPGIYADVERPASIKVDARDINGARFRVNLSGLPARIFQHEFDHL-QGILFFDRMT 717
           FP IYADVERP SIK+DARD+NGARF VNLSGL ARIFQHEFDHL QGILFFDRMT
Sbjct: 179 FPRIYADVERPESIKIDARDVNGARFTVNLSGLRARIFQHEFDHLQQGILFFDRMT 234


>ref|XP_006446529.1| hypothetical protein CICLE_v10016231mg [Citrus clementina]
           gi|567908433|ref|XP_006446530.1| hypothetical protein
           CICLE_v10016231mg [Citrus clementina]
           gi|567908435|ref|XP_006446531.1| hypothetical protein
           CICLE_v10016231mg [Citrus clementina]
           gi|557549140|gb|ESR59769.1| hypothetical protein
           CICLE_v10016231mg [Citrus clementina]
           gi|557549141|gb|ESR59770.1| hypothetical protein
           CICLE_v10016231mg [Citrus clementina]
           gi|557549142|gb|ESR59771.1| hypothetical protein
           CICLE_v10016231mg [Citrus clementina]
          Length = 274

 Score =  275 bits (704), Expect = 8e-72
 Identities = 133/172 (77%), Positives = 151/172 (87%)
 Frame = +1

Query: 208 RRGPSSQVEDLASPADLCFESPLKIVEYPDPILRARNKRISAFDENLRKLVDEMFDIMYK 387
           R G S++ + +ASPADL FE PLKIVEYPDPILRA+NKRI  FD NL+KLVDEMFD+MYK
Sbjct: 60  RYGFSTKEDSVASPADLRFERPLKIVEYPDPILRAKNKRIDTFDYNLKKLVDEMFDVMYK 119

Query: 388 TDGVGLSAPQVGVNVQLMVFNPAGERGEGEEIVLVNPKMYKASTRTFFYNEGCLSFPGIY 567
           TDG+GLSAPQVG+NVQLMVFNP GERGEGEEIVLVNP++ K S +   Y EGCLSFPGI+
Sbjct: 120 TDGIGLSAPQVGINVQLMVFNPVGERGEGEEIVLVNPRVNKYSNKMIPYEEGCLSFPGIH 179

Query: 568 ADVERPASIKVDARDINGARFRVNLSGLPARIFQHEFDHLQGILFFDRMTED 723
           ADVERP S+K+DARDINGARF V+LS LPAR+FQHEFDHLQGILFF+RMT D
Sbjct: 180 ADVERPESVKIDARDINGARFSVSLSDLPARVFQHEFDHLQGILFFERMTGD 231


>gb|EXC20304.1| Peptide deformylase 1B [Morus notabilis]
          Length = 266

 Score =  267 bits (682), Expect = 3e-69
 Identities = 135/217 (62%), Positives = 158/217 (72%), Gaps = 36/217 (16%)
 Frame = +1

Query: 178 SPFADVSVQARRGPSSQVEDLASPADLCFESPLKIVEYPDPILRARNKRISAFDENLRKL 357
           +P   V  QARRG S + +++ASPADL FE PLKIV YPDPILRA+NKRI +FD+NL+KL
Sbjct: 4   APLVPVVAQARRGSSLKEDEVASPADLQFEPPLKIVVYPDPILRAKNKRIDSFDDNLKKL 63

Query: 358 VDEMFDIMYKTDGVGLSAPQVGVNVQLMVFNPAGERGEGEEIVLVNPKMYKASTRTFFYN 537
           V EMFD+MYKTDG+GLSAPQVG+NVQLMV NPAGERG GEEIVLVNP++ + S +   +N
Sbjct: 64  VHEMFDVMYKTDGIGLSAPQVGMNVQLMVLNPAGERGVGEEIVLVNPRVSRYSKKMVLFN 123

Query: 538 EGCLSFPGIYADVERPASIKVDARDINGARFRVNLSGLPARIFQHEFDH----------- 684
           EGCLSFPGIYADV+RP S+K+DARD+NGARF VNLSGLPAR+FQHEFDH           
Sbjct: 124 EGCLSFPGIYADVQRPESVKIDARDVNGARFTVNLSGLPARVFQHEFDHLQVSIQHFLIQ 183

Query: 685 -------------------------LQGILFFDRMTE 720
                                    LQG+LFFDRMTE
Sbjct: 184 YIIAFLMKNYPLYFISSFIFLWQPCLQGVLFFDRMTE 220


>ref|XP_006338575.1| PREDICTED: peptide deformylase 1B, chloroplastic-like [Solanum
           tuberosum]
          Length = 279

 Score =  266 bits (679), Expect = 7e-69
 Identities = 132/183 (72%), Positives = 154/183 (84%), Gaps = 2/183 (1%)
 Frame = +1

Query: 181 PFADVSVQARRGPSSQV--EDLASPADLCFESPLKIVEYPDPILRARNKRISAFDENLRK 354
           P   V  QARR  SS+   +++A+PADL FE PLKIVEYPDPILRA+NKRI  FD NL+K
Sbjct: 54  PKLAVYAQARRVLSSKTKGDEIATPADLSFEVPLKIVEYPDPILRAKNKRIGKFDANLKK 113

Query: 355 LVDEMFDIMYKTDGVGLSAPQVGVNVQLMVFNPAGERGEGEEIVLVNPKMYKASTRTFFY 534
           LVDEMFDIMYKTDG+GLSAPQVG+NVQLMVFN AGERGEGEEIVLVNP++ + S R   Y
Sbjct: 114 LVDEMFDIMYKTDGIGLSAPQVGMNVQLMVFNAAGERGEGEEIVLVNPRVSRYSRRIIPY 173

Query: 535 NEGCLSFPGIYADVERPASIKVDARDINGARFRVNLSGLPARIFQHEFDHLQGILFFDRM 714
            EGCLSFP I+ DVERP S+KV A+DINGARF ++LS LPAR+FQHEFDHLQG+LFFD+M
Sbjct: 174 EEGCLSFPMIHGDVERPDSVKVGAQDINGARFEISLSALPARVFQHEFDHLQGVLFFDKM 233

Query: 715 TED 723
           T++
Sbjct: 234 TDE 236


>dbj|BAJ91971.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 270

 Score =  265 bits (678), Expect = 9e-69
 Identities = 136/217 (62%), Positives = 160/217 (73%)
 Frame = +1

Query: 73  SRRAASSCFPRSFPFPYSGAALRGFSSQPLAVVRDSPFADVSVQARRGPSSQVEDLASPA 252
           S R   +  PR+ P P +G A       PLA      F   +  A   P ++ +D AS A
Sbjct: 21  SSRPLLATHPRTLPLPRTGPAT------PLAARTRRGFGSATSAA---PPNEDDDFASAA 71

Query: 253 DLCFESPLKIVEYPDPILRARNKRISAFDENLRKLVDEMFDIMYKTDGVGLSAPQVGVNV 432
           DL FE PLK+V+YPDP+LRARNKRI+ FD NLR L DEMFD+MYKTDG+GLSAPQVGVNV
Sbjct: 72  DLRFEPPLKVVQYPDPVLRARNKRINTFDNNLRSLADEMFDVMYKTDGIGLSAPQVGVNV 131

Query: 433 QLMVFNPAGERGEGEEIVLVNPKMYKASTRTFFYNEGCLSFPGIYADVERPASIKVDARD 612
           QLMVFNPAG +GEGEEIVLVNP +YK S R   Y EGCLSFPGIYA+V RP ++K+DA+D
Sbjct: 132 QLMVFNPAGVKGEGEEIVLVNPVVYKFSKRLSVYEEGCLSFPGIYANVLRPDTVKIDAQD 191

Query: 613 INGARFRVNLSGLPARIFQHEFDHLQGILFFDRMTED 723
            +GA+ +V LS L AR+FQHEFDHLQGILFFDRMT D
Sbjct: 192 ASGAKIKVKLSELSARVFQHEFDHLQGILFFDRMTMD 228


>ref|NP_001043669.1| Os01g0637600 [Oryza sativa Japonica Group]
           gi|75251983|sp|Q5VNN5.1|DEF1B_ORYSJ RecName:
           Full=Peptide deformylase 1B, chloroplastic;
           Short=OsPDF1B; Short=PDF 1B; Flags: Precursor
           gi|55297005|dbj|BAD68576.1| putative polygalacturonase
           [Oryza sativa Japonica Group]
           gi|55297594|dbj|BAD68940.1| putative polygalacturonase
           [Oryza sativa Japonica Group]
           gi|113533200|dbj|BAF05583.1| Os01g0637600 [Oryza sativa
           Japonica Group] gi|164633054|gb|ABY64740.1| peptide
           deformylase 1B1 [Oryza sativa Japonica Group]
           gi|215741408|dbj|BAG97903.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 269

 Score =  265 bits (677), Expect = 1e-68
 Identities = 136/218 (62%), Positives = 162/218 (74%), Gaps = 19/218 (8%)
 Frame = +1

Query: 127 GAALRGFSSQPLAVVRDSPFAD-----------VSVQARRG--------PSSQVEDLASP 249
           G  LRGF+S    ++   P A             + +ARRG        P ++ ED A+ 
Sbjct: 10  GPRLRGFASSFAPLLAAHPRALPLSRMGSVAPLAAARARRGFGSAVATAPPAEDEDFATA 69

Query: 250 ADLCFESPLKIVEYPDPILRARNKRISAFDENLRKLVDEMFDIMYKTDGVGLSAPQVGVN 429
           ADL FE PLK+V+YPDPILRARNKRI+ FD+NLR L DEMFD+MYKTDG+GLSAPQVGVN
Sbjct: 70  ADLQFEPPLKVVKYPDPILRARNKRINTFDDNLRSLTDEMFDVMYKTDGIGLSAPQVGVN 129

Query: 430 VQLMVFNPAGERGEGEEIVLVNPKMYKASTRTFFYNEGCLSFPGIYADVERPASIKVDAR 609
           VQLMVFNPAG +GEGEEIVLVNP +YK S R   Y EGCLSFPGIYA+V RP ++K+DA+
Sbjct: 130 VQLMVFNPAGVKGEGEEIVLVNPVVYKMSKRLLVYEEGCLSFPGIYANVVRPDNVKIDAQ 189

Query: 610 DINGARFRVNLSGLPARIFQHEFDHLQGILFFDRMTED 723
           D+ GA+ +V LSGL AR+FQHEFDHLQGILFFDRM+ D
Sbjct: 190 DVTGAKIKVKLSGLSARVFQHEFDHLQGILFFDRMSLD 227


>gb|EEE55058.1| hypothetical protein OsJ_02762 [Oryza sativa Japonica Group]
          Length = 267

 Score =  265 bits (677), Expect = 1e-68
 Identities = 136/218 (62%), Positives = 162/218 (74%), Gaps = 19/218 (8%)
 Frame = +1

Query: 127 GAALRGFSSQPLAVVRDSPFAD-----------VSVQARRG--------PSSQVEDLASP 249
           G  LRGF+S    ++   P A             + +ARRG        P ++ ED A+ 
Sbjct: 10  GPRLRGFASSFAPLLAAHPRALPLSRMGSVAPLAAARARRGFGSAVATAPPAEDEDFATA 69

Query: 250 ADLCFESPLKIVEYPDPILRARNKRISAFDENLRKLVDEMFDIMYKTDGVGLSAPQVGVN 429
           ADL FE PLK+V+YPDPILRARNKRI+ FD+NLR L DEMFD+MYKTDG+GLSAPQVGVN
Sbjct: 70  ADLQFEPPLKVVKYPDPILRARNKRINTFDDNLRSLTDEMFDVMYKTDGIGLSAPQVGVN 129

Query: 430 VQLMVFNPAGERGEGEEIVLVNPKMYKASTRTFFYNEGCLSFPGIYADVERPASIKVDAR 609
           VQLMVFNPAG +GEGEEIVLVNP +YK S R   Y EGCLSFPGIYA+V RP ++K+DA+
Sbjct: 130 VQLMVFNPAGVKGEGEEIVLVNPVVYKMSKRLLVYEEGCLSFPGIYANVVRPDNVKIDAQ 189

Query: 610 DINGARFRVNLSGLPARIFQHEFDHLQGILFFDRMTED 723
           D+ GA+ +V LSGL AR+FQHEFDHLQGILFFDRM+ D
Sbjct: 190 DVTGAKIKVKLSGLSARVFQHEFDHLQGILFFDRMSLD 227


>ref|XP_002458212.1| hypothetical protein SORBIDRAFT_03g029040 [Sorghum bicolor]
           gi|241930187|gb|EES03332.1| hypothetical protein
           SORBIDRAFT_03g029040 [Sorghum bicolor]
          Length = 264

 Score =  264 bits (675), Expect = 2e-68
 Identities = 130/195 (66%), Positives = 154/195 (78%), Gaps = 6/195 (3%)
 Frame = +1

Query: 157 PLAVVRDSPFADVSVQARRGPSSQV------EDLASPADLCFESPLKIVEYPDPILRARN 318
           PL + R  P   +  +ARRG  S        ED A+  DL FESPL++V+YPDPILRARN
Sbjct: 28  PLPLRRAGPAMPLVARARRGLGSSTAADPLAEDFATATDLRFESPLEVVKYPDPILRARN 87

Query: 319 KRISAFDENLRKLVDEMFDIMYKTDGVGLSAPQVGVNVQLMVFNPAGERGEGEEIVLVNP 498
           KRI+AFD NLR L DEMFD+MYKTDG+GLSAPQVGVNVQLMVFNPAG +GEGEEIVLVNP
Sbjct: 88  KRINAFDANLRALADEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPAGVKGEGEEIVLVNP 147

Query: 499 KMYKASTRTFFYNEGCLSFPGIYADVERPASIKVDARDINGARFRVNLSGLPARIFQHEF 678
            +YK++ R   + EGCLSFPGIY +V RP S+K++A+D+ GA+ +V LSGLPAR+FQHEF
Sbjct: 148 VVYKSAKRLLVFEEGCLSFPGIYGNVLRPESVKIEAQDVTGAKIKVKLSGLPARVFQHEF 207

Query: 679 DHLQGILFFDRMTED 723
           DHL GILFFDRMT D
Sbjct: 208 DHLLGILFFDRMTMD 222


>ref|XP_004969271.1| PREDICTED: peptide deformylase 1B, chloroplastic-like [Setaria
           italica]
          Length = 270

 Score =  263 bits (673), Expect = 3e-68
 Identities = 128/197 (64%), Positives = 157/197 (79%), Gaps = 8/197 (4%)
 Frame = +1

Query: 157 PLAVVRDSPFADVSVQARRG--------PSSQVEDLASPADLCFESPLKIVEYPDPILRA 312
           P ++ R  P   ++ +ARRG        P ++ +D A+ ADL FE PL++V+YPDPILRA
Sbjct: 32  PPSLRRAGPAMPLAARARRGLSSSTAAAPPAEDDDFATAADLRFEPPLQVVKYPDPILRA 91

Query: 313 RNKRISAFDENLRKLVDEMFDIMYKTDGVGLSAPQVGVNVQLMVFNPAGERGEGEEIVLV 492
           RNKRI+ FD NLR L DEMFD+MYKTDG+GLSAPQVGVNVQLMVFNPAG +GEGEEIVLV
Sbjct: 92  RNKRINTFDTNLRALADEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPAGVKGEGEEIVLV 151

Query: 493 NPKMYKASTRTFFYNEGCLSFPGIYADVERPASIKVDARDINGARFRVNLSGLPARIFQH 672
           NP +YK++ R   + EGCLSFPGIYA+V RP S+K++A+D+ GA+ +V LSGLPAR+FQH
Sbjct: 152 NPVVYKSAKRLLVFEEGCLSFPGIYANVVRPESVKIEAQDVTGAKIKVKLSGLPARVFQH 211

Query: 673 EFDHLQGILFFDRMTED 723
           EFDHL GILFFDRMT D
Sbjct: 212 EFDHLLGILFFDRMTMD 228


>ref|NP_001234441.1| peptide deformylase 1B, chloroplastic [Solanum lycopersicum]
           gi|17433052|sp|Q9FV54.1|DEF1B_SOLLC RecName:
           Full=Peptide deformylase 1B, chloroplastic; Short=PDF
           1B; AltName: Full=Polypeptide deformylase; Flags:
           Precursor gi|11320950|gb|AAG33972.1| peptide
           deformylase-like protein [Solanum lycopersicum]
          Length = 279

 Score =  263 bits (673), Expect = 3e-68
 Identities = 143/228 (62%), Positives = 169/228 (74%), Gaps = 14/228 (6%)
 Frame = +1

Query: 82  AASSCFPR---------SFPFPYSGAALRGFSSQPLAVVRDS---PFADVSVQARRGPSS 225
           A+SS F R         S P P S +  R  S+  L     S   P   V  QARR  SS
Sbjct: 9   ASSSSFTRFLRPLLSRNSSPSPISYSLHRYKSANCLFFSASSNKPPKLAVYAQARRVLSS 68

Query: 226 QV--EDLASPADLCFESPLKIVEYPDPILRARNKRISAFDENLRKLVDEMFDIMYKTDGV 399
           +   +++A+PADL F  PLKIVEYPDPILRA+NKRI  FD NL+KLVDEMFDIMYKTDG+
Sbjct: 69  KTKGDEIATPADLSFVVPLKIVEYPDPILRAKNKRIDNFDANLKKLVDEMFDIMYKTDGI 128

Query: 400 GLSAPQVGVNVQLMVFNPAGERGEGEEIVLVNPKMYKASTRTFFYNEGCLSFPGIYADVE 579
           GLSAPQVG+NVQLMVFN AGERGEGEEIVLVNP++ + S R   Y EGCLSFP I+ DV+
Sbjct: 129 GLSAPQVGMNVQLMVFNAAGERGEGEEIVLVNPRVSRYSRRIIPYEEGCLSFPMIHGDVK 188

Query: 580 RPASIKVDARDINGARFRVNLSGLPARIFQHEFDHLQGILFFDRMTED 723
           RP S+KVDA+DING RF ++LS LPAR+FQHEFDHLQG+LFFD+MT++
Sbjct: 189 RPESVKVDAQDINGTRFEISLSALPARVFQHEFDHLQGVLFFDKMTDE 236