BLASTX nr result

ID: Zingiber24_contig00000896 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00000896
         (263 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548249.1| PREDICTED: chlorophyll a-b binding protein C...    56   4e-06
gb|ACU23386.1| unknown [Glycine max]                                   56   4e-06
ref|XP_004512591.1| PREDICTED: chlorophyll a-b binding protein C...    55   1e-05

>ref|XP_003548249.1| PREDICTED: chlorophyll a-b binding protein CP26, chloroplastic
           [Glycine max]
          Length = 289

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 32/66 (48%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
 Frame = +2

Query: 68  SEILGTRLNATVTPRAAPS-HSPGSSKVTALFXXXXXXXXXXXXXXXXXXDELAKWYGPD 244
           SE+LG  +N +   R APS  SP S K  ALF                  DELAKWYGPD
Sbjct: 16  SEMLGNPINLSGATRPAPSASSPASFKTVALFSKKKAAPPKKAAAAAPANDELAKWYGPD 75

Query: 245 RRIFLP 262
           RRIFLP
Sbjct: 76  RRIFLP 81


>gb|ACU23386.1| unknown [Glycine max]
          Length = 289

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 32/66 (48%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
 Frame = +2

Query: 68  SEILGTRLNATVTPRAAPS-HSPGSSKVTALFXXXXXXXXXXXXXXXXXXDELAKWYGPD 244
           SE+LG  +N +   R APS  SP S K  ALF                  DELAKWYGPD
Sbjct: 16  SEMLGNPINLSGATRPAPSASSPASFKTVALFSKKKAAPPKKAAAAAPANDELAKWYGPD 75

Query: 245 RRIFLP 262
           RRIFLP
Sbjct: 76  RRIFLP 81


>ref|XP_004512591.1| PREDICTED: chlorophyll a-b binding protein CP26, chloroplastic-like
           [Cicer arietinum]
          Length = 289

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 31/66 (46%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
 Frame = +2

Query: 68  SEILGTRLNATVTPRAAPSHS-PGSSKVTALFXXXXXXXXXXXXXXXXXXDELAKWYGPD 244
           SE+LG  +N +   R+APS S P + K  ALF                  DELAKWYGPD
Sbjct: 16  SEMLGNPINFSGATRSAPSPSTPSTFKTVALFSKKKAAPPPKQKVSTPANDELAKWYGPD 75

Query: 245 RRIFLP 262
           RRIFLP
Sbjct: 76  RRIFLP 81


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