BLASTX nr result
ID: Zingiber24_contig00000886
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00000886
(292 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABK23078.1| unknown [Picea sitchensis] gi|116784568|gb|ABK233... 106 4e-21
ref|XP_004973011.1| PREDICTED: 60S acidic ribosomal protein P1-l... 105 5e-21
gb|EMJ19832.1| hypothetical protein PRUPE_ppa013661mg [Prunus pe... 105 5e-21
gb|ABK26870.1| unknown [Picea sitchensis] 104 1e-20
gb|ABK22229.1| unknown [Picea sitchensis] 104 1e-20
gb|ABR17957.1| unknown [Picea sitchensis] 102 7e-20
ref|XP_006659065.1| PREDICTED: 60S acidic ribosomal protein P1-l... 101 9e-20
ref|XP_006347639.1| PREDICTED: 60S acidic ribosomal protein P1-l... 100 3e-19
ref|XP_004235016.1| PREDICTED: 60S acidic ribosomal protein P1-l... 100 3e-19
pdb|3J61|UU Chain u, Localization Of The Large Subunit Ribosomal... 100 3e-19
ref|NP_001060854.1| Os08g0116500 [Oryza sativa Japonica Group] g... 100 3e-19
ref|NP_001149197.1| LOC100282819 [Zea mays] gi|195625376|gb|ACG3... 99 5e-19
gb|ACG30985.1| 60S acidic ribosomal protein P1 [Zea mays] gi|195... 99 5e-19
gb|ACF85707.1| unknown [Zea mays] gi|194708204|gb|ACF88186.1| un... 99 5e-19
ref|NP_001105701.1| 60S acidic ribosomal protein P1 [Zea mays] g... 98 1e-18
ref|XP_002443766.1| hypothetical protein SORBIDRAFT_07g001570 [S... 98 1e-18
gb|ACG31604.1| 60S acidic ribosomal protein P1 [Zea mays] 98 1e-18
gb|ACG30779.1| 60S acidic ribosomal protein P1 [Zea mays] 98 1e-18
ref|XP_002264985.1| PREDICTED: uncharacterized protein LOC100257... 97 3e-18
gb|ACG39420.1| 60S acidic ribosomal protein P1 [Zea mays] 97 3e-18
>gb|ABK23078.1| unknown [Picea sitchensis] gi|116784568|gb|ABK23394.1| unknown
[Picea sitchensis] gi|224286481|gb|ACN40947.1| unknown
[Picea sitchensis]
Length = 112
Score = 106 bits (264), Expect = 4e-21
Identities = 51/62 (82%), Positives = 58/62 (93%)
Frame = -1
Query: 187 MSVSEIACTYAALILYDDGIPITSEKISTLVKAANVTIESYWAALFAKLLEKRSVEDLIL 8
MSVSE+ACTYAALIL+DDGIP+T EKI+TLVKAANV IESYW LFAKLLEKR++EDL+L
Sbjct: 1 MSVSEVACTYAALILWDDGIPVTGEKINTLVKAANVKIESYWPGLFAKLLEKRNIEDLLL 60
Query: 7 SV 2
SV
Sbjct: 61 SV 62
>ref|XP_004973011.1| PREDICTED: 60S acidic ribosomal protein P1-like [Setaria italica]
Length = 109
Score = 105 bits (263), Expect = 5e-21
Identities = 53/62 (85%), Positives = 58/62 (93%)
Frame = -1
Query: 187 MSVSEIACTYAALILYDDGIPITSEKISTLVKAANVTIESYWAALFAKLLEKRSVEDLIL 8
MS SEIACTYAALIL DDGIPIT+EKI+T+VKAAN+ +ESYW ALFAKLLEKRSVEDLIL
Sbjct: 1 MSSSEIACTYAALILSDDGIPITAEKIATIVKAANIKVESYWPALFAKLLEKRSVEDLIL 60
Query: 7 SV 2
SV
Sbjct: 61 SV 62
>gb|EMJ19832.1| hypothetical protein PRUPE_ppa013661mg [Prunus persica]
Length = 110
Score = 105 bits (263), Expect = 5e-21
Identities = 50/62 (80%), Positives = 59/62 (95%)
Frame = -1
Query: 187 MSVSEIACTYAALILYDDGIPITSEKISTLVKAANVTIESYWAALFAKLLEKRSVEDLIL 8
MSVSE+ACTYAAL+L+DDGIPIT+EKI+TLVKAANVT+ESYW LFAKL EKR++EDLIL
Sbjct: 1 MSVSELACTYAALVLHDDGIPITAEKIATLVKAANVTVESYWPGLFAKLAEKRNIEDLIL 60
Query: 7 SV 2
+V
Sbjct: 61 NV 62
>gb|ABK26870.1| unknown [Picea sitchensis]
Length = 114
Score = 104 bits (260), Expect = 1e-20
Identities = 53/62 (85%), Positives = 56/62 (90%)
Frame = -1
Query: 187 MSVSEIACTYAALILYDDGIPITSEKISTLVKAANVTIESYWAALFAKLLEKRSVEDLIL 8
MSVSE+ACTYAALIL DD IPIT EKISTLVKAANV IESYW LFAKLLEKR++EDLIL
Sbjct: 1 MSVSEVACTYAALILCDDNIPITGEKISTLVKAANVQIESYWPGLFAKLLEKRNIEDLIL 60
Query: 7 SV 2
SV
Sbjct: 61 SV 62
>gb|ABK22229.1| unknown [Picea sitchensis]
Length = 114
Score = 104 bits (260), Expect = 1e-20
Identities = 53/62 (85%), Positives = 56/62 (90%)
Frame = -1
Query: 187 MSVSEIACTYAALILYDDGIPITSEKISTLVKAANVTIESYWAALFAKLLEKRSVEDLIL 8
MSVSE+ACTYAALIL DD IPIT EKISTLVKAANV IESYW LFAKLLEKR++EDLIL
Sbjct: 1 MSVSEVACTYAALILCDDNIPITGEKISTLVKAANVQIESYWPGLFAKLLEKRNIEDLIL 60
Query: 7 SV 2
SV
Sbjct: 61 SV 62
>gb|ABR17957.1| unknown [Picea sitchensis]
Length = 113
Score = 102 bits (253), Expect = 7e-20
Identities = 49/62 (79%), Positives = 57/62 (91%)
Frame = -1
Query: 187 MSVSEIACTYAALILYDDGIPITSEKISTLVKAANVTIESYWAALFAKLLEKRSVEDLIL 8
MSVSE+ACTYAAL+L+DD IPIT+EKISTLVKAANV IESYW LFAKL+EKR++EDLI
Sbjct: 1 MSVSEVACTYAALVLHDDNIPITAEKISTLVKAANVQIESYWPGLFAKLMEKRNIEDLIS 60
Query: 7 SV 2
+V
Sbjct: 61 NV 62
>ref|XP_006659065.1| PREDICTED: 60S acidic ribosomal protein P1-like [Oryza brachyantha]
Length = 110
Score = 101 bits (252), Expect = 9e-20
Identities = 50/62 (80%), Positives = 57/62 (91%)
Frame = -1
Query: 187 MSVSEIACTYAALILYDDGIPITSEKISTLVKAANVTIESYWAALFAKLLEKRSVEDLIL 8
MS SE+ACT AALIL+DDGIPITSEKI+TLVKAAN+ +E+YW ALFAKLLE RSV+DLIL
Sbjct: 1 MSSSEVACTLAALILHDDGIPITSEKIATLVKAANIKVEAYWPALFAKLLENRSVDDLIL 60
Query: 7 SV 2
SV
Sbjct: 61 SV 62
>ref|XP_006347639.1| PREDICTED: 60S acidic ribosomal protein P1-like [Solanum tuberosum]
Length = 110
Score = 100 bits (248), Expect = 3e-19
Identities = 45/62 (72%), Positives = 57/62 (91%)
Frame = -1
Query: 187 MSVSEIACTYAALILYDDGIPITSEKISTLVKAANVTIESYWAALFAKLLEKRSVEDLIL 8
MSV E+ CTYAAL+L+DDGIPIT+EKI+T+VKAAN+++ESYW +LFAKL EKR +EDLIL
Sbjct: 1 MSVGELGCTYAALLLFDDGIPITAEKIATVVKAANISVESYWPSLFAKLFEKRDIEDLIL 60
Query: 7 SV 2
+V
Sbjct: 61 TV 62
>ref|XP_004235016.1| PREDICTED: 60S acidic ribosomal protein P1-like [Solanum
lycopersicum]
Length = 110
Score = 100 bits (248), Expect = 3e-19
Identities = 45/62 (72%), Positives = 57/62 (91%)
Frame = -1
Query: 187 MSVSEIACTYAALILYDDGIPITSEKISTLVKAANVTIESYWAALFAKLLEKRSVEDLIL 8
MSV E+ CTYAAL+L+DDGIPIT+EKI+T+VKAAN+++ESYW +LFAKL EKR +EDLIL
Sbjct: 1 MSVGELGCTYAALLLFDDGIPITAEKIATVVKAANISVESYWPSLFAKLFEKRDIEDLIL 60
Query: 7 SV 2
+V
Sbjct: 61 TV 62
>pdb|3J61|UU Chain u, Localization Of The Large Subunit Ribosomal Proteins Into
A 5.5 A Cryo-em Map Of Triticum Aestivum Translating 80s
Ribosome gi|582044921|pdb|3J61|VV Chain v, Localization
Of The Large Subunit Ribosomal Proteins Into A 5.5 A
Cryo-em Map Of Triticum Aestivum Translating 80s
Ribosome gi|57471718|gb|AAW50990.1| ribosomal protein P1
[Triticum aestivum] gi|473837338|gb|EMS47218.1| 60S
acidic ribosomal protein P1 [Triticum urartu]
gi|475518641|gb|EMT06224.1| 60S acidic ribosomal protein
P1 [Aegilops tauschii]
Length = 110
Score = 100 bits (248), Expect = 3e-19
Identities = 49/62 (79%), Positives = 57/62 (91%)
Frame = -1
Query: 187 MSVSEIACTYAALILYDDGIPITSEKISTLVKAANVTIESYWAALFAKLLEKRSVEDLIL 8
MS SE+ACT AALIL+DDGIPITSEKI+T+VKAA + +E+YW ALFAKLLEKRSV+DLIL
Sbjct: 1 MSSSEVACTLAALILHDDGIPITSEKIATVVKAAGIKVEAYWPALFAKLLEKRSVDDLIL 60
Query: 7 SV 2
SV
Sbjct: 61 SV 62
>ref|NP_001060854.1| Os08g0116500 [Oryza sativa Japonica Group]
gi|50725625|dbj|BAD33092.1| putative acidic ribosomal
protein P1a [Oryza sativa Japonica Group]
gi|113622823|dbj|BAF22768.1| Os08g0116500 [Oryza sativa
Japonica Group] gi|125559946|gb|EAZ05394.1| hypothetical
protein OsI_27602 [Oryza sativa Indica Group]
gi|125601988|gb|EAZ41313.1| hypothetical protein
OsJ_25823 [Oryza sativa Japonica Group]
gi|215764941|dbj|BAG86638.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 110
Score = 99.8 bits (247), Expect = 3e-19
Identities = 49/62 (79%), Positives = 56/62 (90%)
Frame = -1
Query: 187 MSVSEIACTYAALILYDDGIPITSEKISTLVKAANVTIESYWAALFAKLLEKRSVEDLIL 8
MS SE+ACT AALIL+DDGIPITSEKI+TLVKAAN+ +E+YW LFAKLLE RSV+DLIL
Sbjct: 1 MSSSEVACTLAALILHDDGIPITSEKIATLVKAANIKVEAYWPGLFAKLLEHRSVDDLIL 60
Query: 7 SV 2
SV
Sbjct: 61 SV 62
>ref|NP_001149197.1| LOC100282819 [Zea mays] gi|195625376|gb|ACG34518.1| 60S acidic
ribosomal protein P1 [Zea mays]
Length = 102
Score = 99.4 bits (246), Expect = 5e-19
Identities = 49/62 (79%), Positives = 56/62 (90%)
Frame = -1
Query: 187 MSVSEIACTYAALILYDDGIPITSEKISTLVKAANVTIESYWAALFAKLLEKRSVEDLIL 8
M+ E+ACTYAALIL DDGI IT+EKI+T+VKAAN+ +ESYW ALFAKLLEKRSVEDLIL
Sbjct: 1 MASGELACTYAALILSDDGIAITAEKIATIVKAANIKVESYWPALFAKLLEKRSVEDLIL 60
Query: 7 SV 2
SV
Sbjct: 61 SV 62
>gb|ACG30985.1| 60S acidic ribosomal protein P1 [Zea mays]
gi|195625300|gb|ACG34480.1| 60S acidic ribosomal protein
P1 [Zea mays]
Length = 109
Score = 99.4 bits (246), Expect = 5e-19
Identities = 49/62 (79%), Positives = 56/62 (90%)
Frame = -1
Query: 187 MSVSEIACTYAALILYDDGIPITSEKISTLVKAANVTIESYWAALFAKLLEKRSVEDLIL 8
M+ E+ACTYAALIL DDGI IT+EKI+T+VKAAN+ +ESYW ALFAKLLEKRSVEDLIL
Sbjct: 1 MASGELACTYAALILSDDGIAITAEKIATIVKAANIKVESYWPALFAKLLEKRSVEDLIL 60
Query: 7 SV 2
SV
Sbjct: 61 SV 62
>gb|ACF85707.1| unknown [Zea mays] gi|194708204|gb|ACF88186.1| unknown [Zea mays]
gi|195605294|gb|ACG24477.1| 60S acidic ribosomal protein
P1 [Zea mays] gi|195606124|gb|ACG24892.1| 60S acidic
ribosomal protein P1 [Zea mays]
gi|413921440|gb|AFW61372.1| 60S acidic ribosomal protein
P1 isoform 1 [Zea mays] gi|413921441|gb|AFW61373.1| 60S
acidic ribosomal protein P1 isoform 2 [Zea mays]
gi|413921442|gb|AFW61374.1| 60S acidic ribosomal protein
P1 isoform 3 [Zea mays]
Length = 109
Score = 99.4 bits (246), Expect = 5e-19
Identities = 49/62 (79%), Positives = 56/62 (90%)
Frame = -1
Query: 187 MSVSEIACTYAALILYDDGIPITSEKISTLVKAANVTIESYWAALFAKLLEKRSVEDLIL 8
M+ E+ACTYAALIL DDGI IT+EKI+T+VKAAN+ +ESYW ALFAKLLEKRSVEDLIL
Sbjct: 1 MASGELACTYAALILSDDGIAITAEKIATIVKAANIKVESYWPALFAKLLEKRSVEDLIL 60
Query: 7 SV 2
SV
Sbjct: 61 SV 62
>ref|NP_001105701.1| 60S acidic ribosomal protein P1 [Zea mays]
gi|2431769|gb|AAB71079.1| acidic ribosomal protein P1a
[Zea mays] gi|195619428|gb|ACG31544.1| 60S acidic
ribosomal protein P1 [Zea mays]
gi|238014308|gb|ACR38189.1| unknown [Zea mays]
gi|413941692|gb|AFW74341.1| acidic ribosomal protein P1a
[Zea mays]
Length = 109
Score = 98.2 bits (243), Expect = 1e-18
Identities = 48/62 (77%), Positives = 56/62 (90%)
Frame = -1
Query: 187 MSVSEIACTYAALILYDDGIPITSEKISTLVKAANVTIESYWAALFAKLLEKRSVEDLIL 8
M+ E+ACTYAALIL DDGI IT+EKI+T+VKAAN+ +ESYW ALFAKLLEKR+VEDLIL
Sbjct: 1 MASGELACTYAALILSDDGIAITAEKIATIVKAANIKVESYWPALFAKLLEKRNVEDLIL 60
Query: 7 SV 2
SV
Sbjct: 61 SV 62
>ref|XP_002443766.1| hypothetical protein SORBIDRAFT_07g001570 [Sorghum bicolor]
gi|241940116|gb|EES13261.1| hypothetical protein
SORBIDRAFT_07g001570 [Sorghum bicolor]
Length = 109
Score = 98.2 bits (243), Expect = 1e-18
Identities = 48/62 (77%), Positives = 56/62 (90%)
Frame = -1
Query: 187 MSVSEIACTYAALILYDDGIPITSEKISTLVKAANVTIESYWAALFAKLLEKRSVEDLIL 8
M+ E+ACTYAALIL DDGI IT+EKI+T+VKAAN+ +ESYW ALFAKLLEKR+VEDLIL
Sbjct: 1 MASGELACTYAALILSDDGIAITAEKIATIVKAANIKVESYWPALFAKLLEKRNVEDLIL 60
Query: 7 SV 2
SV
Sbjct: 61 SV 62
>gb|ACG31604.1| 60S acidic ribosomal protein P1 [Zea mays]
Length = 109
Score = 98.2 bits (243), Expect = 1e-18
Identities = 48/62 (77%), Positives = 56/62 (90%)
Frame = -1
Query: 187 MSVSEIACTYAALILYDDGIPITSEKISTLVKAANVTIESYWAALFAKLLEKRSVEDLIL 8
M+ E+ACTYAALIL DDGI IT+EKI+T+VKAAN+ +ESYW ALFAKLLEKR+VEDLIL
Sbjct: 1 MASGELACTYAALILSDDGIAITAEKIATIVKAANIKVESYWPALFAKLLEKRNVEDLIL 60
Query: 7 SV 2
SV
Sbjct: 61 SV 62
>gb|ACG30779.1| 60S acidic ribosomal protein P1 [Zea mays]
Length = 109
Score = 98.2 bits (243), Expect = 1e-18
Identities = 48/62 (77%), Positives = 56/62 (90%)
Frame = -1
Query: 187 MSVSEIACTYAALILYDDGIPITSEKISTLVKAANVTIESYWAALFAKLLEKRSVEDLIL 8
M+ E+ACTYAALIL DDGI IT+EKI+T+VKAAN+ +ESYW ALFAKLLEKR+VEDLIL
Sbjct: 1 MASGELACTYAALILSDDGIAITAEKIATIVKAANIKVESYWPALFAKLLEKRNVEDLIL 60
Query: 7 SV 2
SV
Sbjct: 61 SV 62
>ref|XP_002264985.1| PREDICTED: uncharacterized protein LOC100257825 [Vitis vinifera]
Length = 175
Score = 96.7 bits (239), Expect = 3e-18
Identities = 48/62 (77%), Positives = 55/62 (88%)
Frame = -1
Query: 187 MSVSEIACTYAALILYDDGIPITSEKISTLVKAANVTIESYWAALFAKLLEKRSVEDLIL 8
MS+SEIACTYAALIL+DD I +T EKI+TLVKAA V +ESYW ALFAKL+EKR+VEDLIL
Sbjct: 1 MSISEIACTYAALILHDDEISVTLEKINTLVKAAKVEVESYWMALFAKLVEKRNVEDLIL 60
Query: 7 SV 2
V
Sbjct: 61 QV 62
>gb|ACG39420.1| 60S acidic ribosomal protein P1 [Zea mays]
Length = 109
Score = 96.7 bits (239), Expect = 3e-18
Identities = 48/62 (77%), Positives = 55/62 (88%)
Frame = -1
Query: 187 MSVSEIACTYAALILYDDGIPITSEKISTLVKAANVTIESYWAALFAKLLEKRSVEDLIL 8
M+ E+ACTYAALIL DDGI IT+EKI+T+VKAAN+ ESYW ALFAKLLEKR+VEDLIL
Sbjct: 1 MASGELACTYAALILSDDGIAITAEKIATIVKAANIKXESYWPALFAKLLEKRNVEDLIL 60
Query: 7 SV 2
SV
Sbjct: 61 SV 62