BLASTX nr result

ID: Zingiber24_contig00000614 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00000614
         (642 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319245.1| hypothetical protein POPTR_0013s07570g [Popu...    65   2e-08
ref|XP_002325872.1| hypothetical protein POPTR_0019s05840g [Popu...    62   2e-07
gb|ABK93476.1| unknown [Populus trichocarpa]                           62   2e-07
ref|XP_006484598.1| PREDICTED: uncharacterized protein LOC102628...    61   3e-07
ref|XP_006484597.1| PREDICTED: uncharacterized protein LOC102628...    61   3e-07
ref|XP_003537695.1| PREDICTED: uncharacterized protein LOC100787...    58   2e-06
ref|XP_002520082.1| conserved hypothetical protein [Ricinus comm...    57   3e-06
ref|XP_002270877.1| PREDICTED: uncharacterized protein LOC100249...    56   8e-06

>ref|XP_002319245.1| hypothetical protein POPTR_0013s07570g [Populus trichocarpa]
           gi|222857621|gb|EEE95168.1| hypothetical protein
           POPTR_0013s07570g [Populus trichocarpa]
          Length = 162

 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 44/106 (41%), Positives = 57/106 (53%), Gaps = 9/106 (8%)
 Frame = -2

Query: 602 ATSFATPAVICGLQNGKLKPLSGYPTK---------LVVPQKSKVLKSSPRLSVCAKYXX 450
           ATSFA  +V  G    +LKP   + TK         L + +KS ++ SSP+ +V A+Y  
Sbjct: 2   ATSFAPVSVSSG-GGSQLKPRELWSTKSISFSKAPRLAIGRKSNLVGSSPKFAVRAEYND 60

Query: 449 XXXXXXXXXXXXXXXXXXXXGTLAYVFAPQIRRSLLNEDEHGFRKA 312
                               GTLAY+FAPQIRRSLLNEDE+GFR+A
Sbjct: 61  GSRGGGGDFVAGFVLGGAVFGTLAYIFAPQIRRSLLNEDEYGFRRA 106


>ref|XP_002325872.1| hypothetical protein POPTR_0019s05840g [Populus trichocarpa]
           gi|222862747|gb|EEF00254.1| hypothetical protein
           POPTR_0019s05840g [Populus trichocarpa]
          Length = 161

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 43/106 (40%), Positives = 56/106 (52%), Gaps = 9/106 (8%)
 Frame = -2

Query: 602 ATSFATPAVICGLQNGKLKPLSGYPTK---------LVVPQKSKVLKSSPRLSVCAKYXX 450
           ATS A  ++  G    K +PL  + TK         L V +KS  + +SP+L+V A+Y  
Sbjct: 2   ATSLAPVSISSGGSQLKARPL--WSTKSISLAKSPGLAVGRKSNPVGTSPKLAVRAQYND 59

Query: 449 XXXXXXXXXXXXXXXXXXXXGTLAYVFAPQIRRSLLNEDEHGFRKA 312
                               GT+AY+FAPQIRRSLLNEDE+GFRKA
Sbjct: 60  GSSGGGGDFVAGFLLGGAVFGTVAYIFAPQIRRSLLNEDEYGFRKA 105


>gb|ABK93476.1| unknown [Populus trichocarpa]
          Length = 161

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 43/106 (40%), Positives = 56/106 (52%), Gaps = 9/106 (8%)
 Frame = -2

Query: 602 ATSFATPAVICGLQNGKLKPLSGYPTK---------LVVPQKSKVLKSSPRLSVCAKYXX 450
           ATS A  ++  G    K +PL  + TK         L V +KS  + +SP+L+V A+Y  
Sbjct: 2   ATSLAPVSISSGGSQLKARPL--WSTKSISLAKSPGLAVGRKSNPVGTSPKLAVRAQYND 59

Query: 449 XXXXXXXXXXXXXXXXXXXXGTLAYVFAPQIRRSLLNEDEHGFRKA 312
                               GT+AY+FAPQIRRSLLNEDE+GFRKA
Sbjct: 60  GSSGGGGDFVAGFLLGGAVFGTVAYIFAPQIRRSLLNEDEYGFRKA 105


>ref|XP_006484598.1| PREDICTED: uncharacterized protein LOC102628651 isoform X2 [Citrus
           sinensis] gi|568884533|ref|XP_006494934.1| PREDICTED:
           uncharacterized protein LOC102622840 [Citrus sinensis]
          Length = 160

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 40/98 (40%), Positives = 52/98 (53%), Gaps = 7/98 (7%)
 Frame = -2

Query: 584 PAVICGLQNGKLKPLS-------GYPTKLVVPQKSKVLKSSPRLSVCAKYXXXXXXXXXX 426
           P  I G  + K + LS       G   KL+V +KS  L+++ + S+ A+Y          
Sbjct: 7   PVSISGGSHLKARELSSAKSATFGKTPKLIVQRKSNQLETNHKFSIRAEYGEGSQRGGGD 66

Query: 425 XXXXXXXXXXXXGTLAYVFAPQIRRSLLNEDEHGFRKA 312
                       GTLAYVFAPQIRRSLLNEDE+GFR+A
Sbjct: 67  FIAGFLVGGAVFGTLAYVFAPQIRRSLLNEDEYGFRRA 104


>ref|XP_006484597.1| PREDICTED: uncharacterized protein LOC102628651 isoform X1 [Citrus
           sinensis]
          Length = 161

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 40/98 (40%), Positives = 52/98 (53%), Gaps = 7/98 (7%)
 Frame = -2

Query: 584 PAVICGLQNGKLKPLS-------GYPTKLVVPQKSKVLKSSPRLSVCAKYXXXXXXXXXX 426
           P  I G  + K + LS       G   KL+V +KS  L+++ + S+ A+Y          
Sbjct: 7   PVSISGGSHLKARELSSAKSATFGKTPKLIVQRKSNQLETNHKFSIRAEYGEGSQRGGGD 66

Query: 425 XXXXXXXXXXXXGTLAYVFAPQIRRSLLNEDEHGFRKA 312
                       GTLAYVFAPQIRRSLLNEDE+GFR+A
Sbjct: 67  FIAGFLVGGAVFGTLAYVFAPQIRRSLLNEDEYGFRRA 104


>ref|XP_003537695.1| PREDICTED: uncharacterized protein LOC100787910 [Glycine max]
          Length = 154

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 39/97 (40%), Positives = 48/97 (49%)
 Frame = -2

Query: 602 ATSFATPAVICGLQNGKLKPLSGYPTKLVVPQKSKVLKSSPRLSVCAKYXXXXXXXXXXX 423
           AT FA  +V  G  +         P   V  + S V+K +   S+CA+Y           
Sbjct: 2   ATCFAPFSVSVGGSHELWSTKRVGPKLSVQRRSSLVIKRNHTSSICAEYRDNRGGGGGDF 61

Query: 422 XXXXXXXXXXXGTLAYVFAPQIRRSLLNEDEHGFRKA 312
                      GTLAY+FAPQIRRSLLNEDE+GFRKA
Sbjct: 62  VAGFLLGGAVFGTLAYIFAPQIRRSLLNEDEYGFRKA 98


>ref|XP_002520082.1| conserved hypothetical protein [Ricinus communis]
           gi|223540846|gb|EEF42406.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 161

 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 40/98 (40%), Positives = 49/98 (50%), Gaps = 7/98 (7%)
 Frame = -2

Query: 584 PAVICGLQNGKLKPLS-------GYPTKLVVPQKSKVLKSSPRLSVCAKYXXXXXXXXXX 426
           P  I G  N K + L        G  ++L V +K  ++ ++  LSV A Y          
Sbjct: 7   PVSISGGSNLKARELCSSKSLSFGKTSRLAVQRKLNLVGTNCNLSVRANYQDGNRGGGSD 66

Query: 425 XXXXXXXXXXXXGTLAYVFAPQIRRSLLNEDEHGFRKA 312
                       GTLAYVFAPQIRRSLLNEDE+GFRKA
Sbjct: 67  FVAGFLLGGAIFGTLAYVFAPQIRRSLLNEDEYGFRKA 104


>ref|XP_002270877.1| PREDICTED: uncharacterized protein LOC100249521 [Vitis vinifera]
           gi|297737269|emb|CBI26470.3| unnamed protein product
           [Vitis vinifera]
          Length = 158

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 36/80 (45%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
 Frame = -2

Query: 548 KPLS-GYPTKLVVPQKSKVLKSSPRLSVCAKYXXXXXXXXXXXXXXXXXXXXXXGTLAYV 372
           KP S G   +L++ +KS   ++  +LSVCA++                      GTLAYV
Sbjct: 25  KPNSFGKTPRLMIQRKSN--RNVRKLSVCAEHNGGNKGGGGDFVAGFLLGGAVFGTLAYV 82

Query: 371 FAPQIRRSLLNEDEHGFRKA 312
           FAPQIRRSLLNEDE+GFR+A
Sbjct: 83  FAPQIRRSLLNEDEYGFRRA 102


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