BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00000545
         (658 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEC79263.1| hypothetical protein OsI_20043 [Oryza sativa Indi...    62   2e-07
ref|NP_001055607.1| Os05g0427300 [Oryza sativa Japonica Group] g...    61   3e-07
gb|EMT04706.1| Splicing factor 3B subunit 4 [Aegilops tauschii]        60   4e-07
gb|EMJ03071.1| hypothetical protein PRUPE_ppa011785mg [Prunus pe...    60   4e-07
gb|EMS45880.1| Splicing factor 3B subunit 4 [Triticum urartu]          57   4e-06
gb|ACG25819.1| RNA recognition motif-containing protein [Zea may...    57   6e-06
gb|ACG24416.1| RNA recognition motif-containing protein [Zea may...    57   6e-06
gb|ACG39769.1| RNA recognition motif-containing protein [Zea mays]     56   8e-06

>gb|EEC79263.1| hypothetical protein OsI_20043 [Oryza sativa Indica Group]
          Length = 187

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 38/105 (36%), Positives = 53/105 (50%), Gaps = 2/105 (1%)
 Frame = +2

Query: 2   ISGQDKSSQNTGTPIT--LKPTFPRSTSVSGREIDVSRNSLRLVNHRDSENIDDVPLSYP 175
           ISGQDK S N   P+T  L P  P   +   R  D   +   +VN R +    +   S  
Sbjct: 83  ISGQDKQSSNGNIPVTPKLNPIPPPKPAQLMRSSDTPASQHTVVNGRIAGISPNHSYSAH 142

Query: 176 QSSSYGSLNNDMNRGNYEYSRRVFGSMFNNDNRQGGTHPITFPSY 310
             +  G  +  ++ G YEYSRRVFGS+ N+ +R+    PI +PSY
Sbjct: 143 SEAPSGISSRGLSNGTYEYSRRVFGSVLNDVSRRTDRQPIPYPSY 187


>ref|NP_001055607.1| Os05g0427300 [Oryza sativa Japonica Group]
           gi|113579158|dbj|BAF17521.1| Os05g0427300 [Oryza sativa
           Japonica Group] gi|215692737|dbj|BAG88157.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|215737792|dbj|BAG96922.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215765638|dbj|BAG87335.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215767778|dbj|BAH00007.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|222631662|gb|EEE63794.1| hypothetical protein
           OsJ_18618 [Oryza sativa Japonica Group]
          Length = 187

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 38/105 (36%), Positives = 53/105 (50%), Gaps = 2/105 (1%)
 Frame = +2

Query: 2   ISGQDKSSQNTGTPITLK--PTFPRSTSVSGREIDVSRNSLRLVNHRDSENIDDVPLSYP 175
           ISGQDK S N   P+T K  P  P   +   R  D   +   +VN R +    +   S  
Sbjct: 83  ISGQDKQSSNGNIPVTPKVNPIPPPKPAQLMRSSDTPASQHTVVNGRIAGISPNHSYSAH 142

Query: 176 QSSSYGSLNNDMNRGNYEYSRRVFGSMFNNDNRQGGTHPITFPSY 310
             +  G  +  ++ G YEYSRRVFGS+ N+ +R+    PI +PSY
Sbjct: 143 SEAPSGISSRGLSNGTYEYSRRVFGSVLNDVSRRTDRQPIPYPSY 187


>gb|EMT04706.1| Splicing factor 3B subunit 4 [Aegilops tauschii]
          Length = 227

 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 40/107 (37%), Positives = 55/107 (51%), Gaps = 4/107 (3%)
 Frame = +2

Query: 2   ISGQDKSSQNTGTPITLKPT-FPRSTSVSGREI-DVSRNSLRLVNHRDSENIDDVPLSYP 175
           ISGQDK+S N   P+T K    P S         D   +  R+VN R + +      SY 
Sbjct: 121 ISGQDKASSNVNVPVTPKMNPIPLSNPPQPMRFGDTPVSQHRVVNGRIAGHGVSPNHSYD 180

Query: 176 --QSSSYGSLNNDMNRGNYEYSRRVFGSMFNNDNRQGGTHPITFPSY 310
               +S G  +  +N G YEYSRRVFGS+ N+ +R+    P+ +PSY
Sbjct: 181 FHSQASSGVASRGLNDGTYEYSRRVFGSVMNDVSRRADRQPVPYPSY 227


>gb|EMJ03071.1| hypothetical protein PRUPE_ppa011785mg [Prunus persica]
          Length = 196

 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 44/121 (36%), Positives = 60/121 (49%), Gaps = 18/121 (14%)
 Frame = +2

Query: 2   ISGQDKSSQNTGTPITLKPTFP---RSTSVSGREIDVSRNSLRLVNHRDSENIDDVPLSY 172
           ISG+DK S NT + +    +FP   RS       +++S NS+ L   R    I D PL+Y
Sbjct: 83  ISGRDKPSHNTPSTVASASSFPHKLRSAPSPINSMEISPNSIGLSTPR----ISDFPLNY 138

Query: 173 P----------QSSSYGSLNNDMNRGNYEYSRRVFGSMF-----NNDNRQGGTHPITFPS 307
           P          QS+ YG  NN     NYEYSRRV G+       +   R   ++PI++PS
Sbjct: 139 PPVPTPPGVNKQSNGYGLPNNG---NNYEYSRRVIGATLDTISRSRSRRHDMSNPISYPS 195

Query: 308 Y 310
           Y
Sbjct: 196 Y 196


>gb|EMS45880.1| Splicing factor 3B subunit 4 [Triticum urartu]
          Length = 222

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 37/105 (35%), Positives = 54/105 (51%), Gaps = 2/105 (1%)
 Frame = +2

Query: 2   ISGQDKSSQNTGTPITLKPTFPRSTSVSGREIDVSRNSLRLVNHRDSENIDDVPLSYP-- 175
           ISGQDK+S N   P+T K     +     R  D   +  R+VN R +        SY   
Sbjct: 118 ISGQDKASSNVNVPVTPKMNPLPNPPQPMRFGDTPVSQHRVVNGRIAGYGVSPNHSYDFH 177

Query: 176 QSSSYGSLNNDMNRGNYEYSRRVFGSMFNNDNRQGGTHPITFPSY 310
             +S G  +  ++ G Y+YSRRVFGS+ N+ +R+    P+ +PSY
Sbjct: 178 SQASSGVASRGLSDGTYDYSRRVFGSVLNDVSRRADRQPVPYPSY 222


>gb|ACG25819.1| RNA recognition motif-containing protein [Zea mays]
           gi|413945428|gb|AFW78077.1| RNA recognition motif
           protein-containing protein [Zea mays]
          Length = 137

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 43/113 (38%), Positives = 54/113 (47%), Gaps = 10/113 (8%)
 Frame = +2

Query: 2   ISGQDKSSQNTGTPITLKPTFPRSTSVSG-------REIDVSRNSLRLVNHRDSENIDDV 160
           ISGQDK S N   P+T     PR  SV         R  D        VN R++      
Sbjct: 30  ISGQDKPSLNGNIPVT-----PRLNSVPQPKPHQPMRSSDTPLPQHAAVNGRNAGYGIPP 84

Query: 161 PLSYP---QSSSYGSLNNDMNRGNYEYSRRVFGSMFNNDNRQGGTHPITFPSY 310
             SY    Q+ S G  N  ++ G YEYSRRVFGS+ N+ +R+    PI +PSY
Sbjct: 85  NHSYDTHTQALSSGLPNRGLSNGTYEYSRRVFGSVLNDVSRRATREPIPYPSY 137


>gb|ACG24416.1| RNA recognition motif-containing protein [Zea mays]
           gi|223944379|gb|ACN26273.1| unknown [Zea mays]
           gi|413945426|gb|AFW78075.1| RNA recognition motif
           protein-containing protein [Zea mays]
          Length = 190

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 43/113 (38%), Positives = 54/113 (47%), Gaps = 10/113 (8%)
 Frame = +2

Query: 2   ISGQDKSSQNTGTPITLKPTFPRSTSVSG-------REIDVSRNSLRLVNHRDSENIDDV 160
           ISGQDK S N   P+T     PR  SV         R  D        VN R++      
Sbjct: 83  ISGQDKPSLNGNIPVT-----PRLNSVPQPKPHQPMRSSDTPLPQHAAVNGRNAGYGIPP 137

Query: 161 PLSYP---QSSSYGSLNNDMNRGNYEYSRRVFGSMFNNDNRQGGTHPITFPSY 310
             SY    Q+ S G  N  ++ G YEYSRRVFGS+ N+ +R+    PI +PSY
Sbjct: 138 NHSYDTHTQALSSGLPNRGLSNGTYEYSRRVFGSVLNDVSRRATREPIPYPSY 190


>gb|ACG39769.1| RNA recognition motif-containing protein [Zea mays]
          Length = 190

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 43/113 (38%), Positives = 53/113 (46%), Gaps = 10/113 (8%)
 Frame = +2

Query: 2   ISGQDKSSQNTGTPITLKPTFPRSTSVSG-------REIDVSRNSLRLVNHRDSENIDDV 160
           ISGQDK S N   P+T     PR  SV         R  D        VN R +      
Sbjct: 83  ISGQDKPSLNGNIPVT-----PRLNSVPQPKPHQPMRSSDTPLPQHTAVNGRSAGYGIPP 137

Query: 161 PLSYP---QSSSYGSLNNDMNRGNYEYSRRVFGSMFNNDNRQGGTHPITFPSY 310
             SY    Q+ S G  N  ++ G YEYSRRVFGS+ N+ +R+    PI +PSY
Sbjct: 138 NHSYDTHTQALSSGLPNRGLSNGTYEYSRRVFGSVLNDVSRRATREPIPYPSY 190