BLASTX nr result
ID: Zingiber24_contig00000352
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00000352
(206 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABD38707.1| chloroplast chlorophyll a/b binding protein [Pach... 111 9e-23
ref|XP_002285646.1| PREDICTED: chlorophyll a-b binding protein 4... 111 1e-22
ref|XP_004145734.1| PREDICTED: chlorophyll a-b binding protein, ... 110 2e-22
gb|ABF17940.1| putative chloroplast chlorophyll a/b-binding prot... 110 2e-22
ref|XP_004234063.1| PREDICTED: chlorophyll a-b binding protein 3... 108 6e-22
ref|XP_004234062.1| PREDICTED: chlorophyll a-b binding protein 3... 108 6e-22
ref|XP_004234058.1| PREDICTED: chlorophyll a-b binding protein 3... 108 6e-22
dbj|BAF95850.1| putative chloroplast chlorophyll a/b binding pro... 108 6e-22
ref|XP_004234241.1| PREDICTED: uncharacterized protein LOC101245... 107 1e-21
gb|AAT08694.1| chloroplast chlorophyll A-B binding protein 40 [H... 107 2e-21
ref|XP_006356073.1| PREDICTED: chlorophyll a-b binding protein 3... 105 6e-21
ref|XP_006356077.1| PREDICTED: chlorophyll a-b binding protein 3... 104 1e-20
gb|AGJ50622.1| chlorophyll a/b binding protein [Salicornia brach... 104 1e-20
ref|XP_006361530.1| PREDICTED: chlorophyll a-b binding protein 3... 103 2e-20
ref|XP_006356075.1| PREDICTED: chlorophyll a-b binding protein 3... 103 2e-20
dbj|BAA25396.1| light harvesting chlorophyll a/b-binding protein... 102 4e-20
gb|AAA34148.1| chlorophyll a/b-binding protein Cab-3C [Solanum l... 102 4e-20
sp|P07369.1|CB2G_SOLLC RecName: Full=Chlorophyll a-b binding pro... 102 4e-20
gb|ABF69952.1| chlorophyll A-B binding protein (CAB), putative [... 102 4e-20
ref|XP_006356078.1| PREDICTED: chlorophyll a-b binding protein 3... 102 5e-20
>gb|ABD38707.1| chloroplast chlorophyll a/b binding protein [Pachysandra
terminalis]
Length = 267
Score = 111 bits (278), Expect = 9e-23
Identities = 54/68 (79%), Positives = 56/68 (82%)
Frame = +1
Query: 1 SFVGKPVKFAPSLSDGLGGGGRFTMRKTGGRPKPAVSGSPWYGADRVKYLGPFSGEPPSY 180
S GK VK APS S+ LG G R +MRKTGGRPKP SGSPWYG DRVKYLGPFSGEPPSY
Sbjct: 12 SLAGKAVKLAPSASELLGVG-RVSMRKTGGRPKPVSSGSPWYGPDRVKYLGPFSGEPPSY 70
Query: 181 LTGEFPGD 204
LTGEFPGD
Sbjct: 71 LTGEFPGD 78
>ref|XP_002285646.1| PREDICTED: chlorophyll a-b binding protein 40, chloroplastic [Vitis
vinifera] gi|147833686|emb|CAN73057.1| hypothetical
protein VITISV_007597 [Vitis vinifera]
Length = 267
Score = 111 bits (277), Expect = 1e-22
Identities = 54/68 (79%), Positives = 55/68 (80%)
Frame = +1
Query: 1 SFVGKPVKFAPSLSDGLGGGGRFTMRKTGGRPKPAVSGSPWYGADRVKYLGPFSGEPPSY 180
S GK +K APS SD LG G R TMRKTGGR KP SGSPWYG DRVKYLGPFSGEPPSY
Sbjct: 12 SLAGKALKLAPSASDLLGEG-RVTMRKTGGRAKPVSSGSPWYGTDRVKYLGPFSGEPPSY 70
Query: 181 LTGEFPGD 204
LTGEFPGD
Sbjct: 71 LTGEFPGD 78
>ref|XP_004145734.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic-like
[Cucumis sativus] gi|449525484|ref|XP_004169747.1|
PREDICTED: chlorophyll a-b binding protein,
chloroplastic-like [Cucumis sativus]
Length = 267
Score = 110 bits (275), Expect = 2e-22
Identities = 52/68 (76%), Positives = 56/68 (82%)
Frame = +1
Query: 1 SFVGKPVKFAPSLSDGLGGGGRFTMRKTGGRPKPAVSGSPWYGADRVKYLGPFSGEPPSY 180
SF G+ VK +P+ SD LG G R TMRKT G+PKP SGSPWYG DRVKYLGPFSGEPPSY
Sbjct: 12 SFAGQAVKLSPTASDLLGEG-RITMRKTAGKPKPVSSGSPWYGPDRVKYLGPFSGEPPSY 70
Query: 181 LTGEFPGD 204
LTGEFPGD
Sbjct: 71 LTGEFPGD 78
>gb|ABF17940.1| putative chloroplast chlorophyll a/b-binding protein [Carya
cathayensis]
Length = 267
Score = 110 bits (275), Expect = 2e-22
Identities = 53/68 (77%), Positives = 55/68 (80%)
Frame = +1
Query: 1 SFVGKPVKFAPSLSDGLGGGGRFTMRKTGGRPKPAVSGSPWYGADRVKYLGPFSGEPPSY 180
S G+ +K APS SD LG G R TMRKT GRPKP SGSPWYG DRVKYLGPFSGEPPSY
Sbjct: 12 SLAGQAIKLAPSSSDLLGEG-RVTMRKTAGRPKPVSSGSPWYGPDRVKYLGPFSGEPPSY 70
Query: 181 LTGEFPGD 204
LTGEFPGD
Sbjct: 71 LTGEFPGD 78
>ref|XP_004234063.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
isoform 6 [Solanum lycopersicum]
Length = 244
Score = 108 bits (271), Expect = 6e-22
Identities = 51/68 (75%), Positives = 55/68 (80%)
Frame = +1
Query: 1 SFVGKPVKFAPSLSDGLGGGGRFTMRKTGGRPKPAVSGSPWYGADRVKYLGPFSGEPPSY 180
+F GK VK APS S+ + G GR TMRKT +PKPA SGSPWYG DRVKYLGPFSGE PSY
Sbjct: 12 TFAGKTVKLAPSSSE-ISGNGRITMRKTAAKPKPASSGSPWYGPDRVKYLGPFSGESPSY 70
Query: 181 LTGEFPGD 204
LTGEFPGD
Sbjct: 71 LTGEFPGD 78
>ref|XP_004234062.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
isoform 5 [Solanum lycopersicum]
Length = 255
Score = 108 bits (271), Expect = 6e-22
Identities = 51/68 (75%), Positives = 55/68 (80%)
Frame = +1
Query: 1 SFVGKPVKFAPSLSDGLGGGGRFTMRKTGGRPKPAVSGSPWYGADRVKYLGPFSGEPPSY 180
+F GK VK APS S+ + G GR TMRKT +PKPA SGSPWYG DRVKYLGPFSGE PSY
Sbjct: 12 TFAGKTVKLAPSSSE-ISGNGRITMRKTAAKPKPASSGSPWYGPDRVKYLGPFSGESPSY 70
Query: 181 LTGEFPGD 204
LTGEFPGD
Sbjct: 71 LTGEFPGD 78
>ref|XP_004234058.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
isoform 1 [Solanum lycopersicum]
gi|460376546|ref|XP_004234059.1| PREDICTED: chlorophyll
a-b binding protein 3C, chloroplastic-like isoform 2
[Solanum lycopersicum] gi|460376548|ref|XP_004234060.1|
PREDICTED: chlorophyll a-b binding protein 3C,
chloroplastic-like isoform 3 [Solanum lycopersicum]
gi|460376550|ref|XP_004234061.1| PREDICTED: chlorophyll
a-b binding protein 3C, chloroplastic-like isoform 4
[Solanum lycopersicum]
Length = 267
Score = 108 bits (271), Expect = 6e-22
Identities = 51/68 (75%), Positives = 55/68 (80%)
Frame = +1
Query: 1 SFVGKPVKFAPSLSDGLGGGGRFTMRKTGGRPKPAVSGSPWYGADRVKYLGPFSGEPPSY 180
+F GK VK APS S+ + G GR TMRKT +PKPA SGSPWYG DRVKYLGPFSGE PSY
Sbjct: 12 TFAGKTVKLAPSSSE-ISGNGRITMRKTAAKPKPASSGSPWYGPDRVKYLGPFSGESPSY 70
Query: 181 LTGEFPGD 204
LTGEFPGD
Sbjct: 71 LTGEFPGD 78
>dbj|BAF95850.1| putative chloroplast chlorophyll a/b binding protein [Vitis hybrid
cultivar]
Length = 234
Score = 108 bits (271), Expect = 6e-22
Identities = 53/68 (77%), Positives = 54/68 (79%)
Frame = +1
Query: 1 SFVGKPVKFAPSLSDGLGGGGRFTMRKTGGRPKPAVSGSPWYGADRVKYLGPFSGEPPSY 180
S GK + APS SD LG G R TMRKTGGR KP SGSPWYG DRVKYLGPFSGEPPSY
Sbjct: 10 SLAGKAFQLAPSASDLLGEG-RVTMRKTGGRAKPVSSGSPWYGTDRVKYLGPFSGEPPSY 68
Query: 181 LTGEFPGD 204
LTGEFPGD
Sbjct: 69 LTGEFPGD 76
>ref|XP_004234241.1| PREDICTED: uncharacterized protein LOC101245729 [Solanum
lycopersicum]
Length = 554
Score = 107 bits (268), Expect = 1e-21
Identities = 50/68 (73%), Positives = 55/68 (80%)
Frame = +1
Query: 1 SFVGKPVKFAPSLSDGLGGGGRFTMRKTGGRPKPAVSGSPWYGADRVKYLGPFSGEPPSY 180
+F GK VK +PS S+ + G GR TMRKT +PKPA SGSPWYG DRVKYLGPFSGE PSY
Sbjct: 12 TFAGKAVKLSPSSSE-ISGNGRITMRKTAAKPKPASSGSPWYGPDRVKYLGPFSGESPSY 70
Query: 181 LTGEFPGD 204
LTGEFPGD
Sbjct: 71 LTGEFPGD 78
Score = 102 bits (255), Expect = 4e-20
Identities = 49/68 (72%), Positives = 54/68 (79%)
Frame = +1
Query: 1 SFVGKPVKFAPSLSDGLGGGGRFTMRKTGGRPKPAVSGSPWYGADRVKYLGPFSGEPPSY 180
+F GK VK +PS S+ + G GR TMRKT + KPA SGSPWYG DRVKYLGPFSGE PSY
Sbjct: 299 TFAGKAVKLSPSSSE-ITGNGRVTMRKTATKAKPASSGSPWYGPDRVKYLGPFSGESPSY 357
Query: 181 LTGEFPGD 204
LTGEFPGD
Sbjct: 358 LTGEFPGD 365
>gb|AAT08694.1| chloroplast chlorophyll A-B binding protein 40 [Hyacinthus
orientalis]
Length = 211
Score = 107 bits (266), Expect = 2e-21
Identities = 49/68 (72%), Positives = 51/68 (75%)
Frame = +1
Query: 1 SFVGKPVKFAPSLSDGLGGGGRFTMRKTGGRPKPAVSGSPWYGADRVKYLGPFSGEPPSY 180
S G VK PS S G+ G GRFTMRKT +PK SGSPWYG DRVKYLGPFSGE PSY
Sbjct: 11 SLAGTAVKLTPSSSSGVSGDGRFTMRKTAAKPKTVSSGSPWYGPDRVKYLGPFSGEAPSY 70
Query: 181 LTGEFPGD 204
LTGEFPGD
Sbjct: 71 LTGEFPGD 78
>ref|XP_006356073.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
[Solanum tuberosum]
Length = 267
Score = 105 bits (262), Expect = 6e-21
Identities = 50/68 (73%), Positives = 55/68 (80%)
Frame = +1
Query: 1 SFVGKPVKFAPSLSDGLGGGGRFTMRKTGGRPKPAVSGSPWYGADRVKYLGPFSGEPPSY 180
+FVGK VK +PS S+ + G GR TMRKT + KPA SGSPWYG DRVKYLGPFSGE PSY
Sbjct: 12 TFVGKAVKLSPSSSE-ITGNGRITMRKTAAKAKPASSGSPWYGPDRVKYLGPFSGEAPSY 70
Query: 181 LTGEFPGD 204
LTGEFPGD
Sbjct: 71 LTGEFPGD 78
>ref|XP_006356077.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
[Solanum tuberosum]
Length = 267
Score = 104 bits (260), Expect = 1e-20
Identities = 50/68 (73%), Positives = 54/68 (79%)
Frame = +1
Query: 1 SFVGKPVKFAPSLSDGLGGGGRFTMRKTGGRPKPAVSGSPWYGADRVKYLGPFSGEPPSY 180
SF GK VK +PS S+ + G GR TMRKT + KPA SGSPWYG DRVKYLGPFSGE PSY
Sbjct: 12 SFAGKAVKLSPSSSE-ITGNGRVTMRKTAAKAKPASSGSPWYGPDRVKYLGPFSGESPSY 70
Query: 181 LTGEFPGD 204
LTGEFPGD
Sbjct: 71 LTGEFPGD 78
>gb|AGJ50622.1| chlorophyll a/b binding protein [Salicornia brachiata]
Length = 267
Score = 104 bits (259), Expect = 1e-20
Identities = 48/68 (70%), Positives = 53/68 (77%)
Frame = +1
Query: 1 SFVGKPVKFAPSLSDGLGGGGRFTMRKTGGRPKPAVSGSPWYGADRVKYLGPFSGEPPSY 180
S GKP+K P+ ++ LG G R TMRKT G+PK SGSPWYG DRVKYLGPFSGEPPSY
Sbjct: 12 SLAGKPIKLGPNAAEILGEG-RVTMRKTAGKPKQVASGSPWYGPDRVKYLGPFSGEPPSY 70
Query: 181 LTGEFPGD 204
LTGE PGD
Sbjct: 71 LTGELPGD 78
>ref|XP_006361530.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
isoform X1 [Solanum tuberosum]
gi|565391644|ref|XP_006361531.1| PREDICTED: chlorophyll
a-b binding protein 3C, chloroplastic-like isoform X2
[Solanum tuberosum]
Length = 267
Score = 103 bits (258), Expect = 2e-20
Identities = 49/68 (72%), Positives = 54/68 (79%)
Frame = +1
Query: 1 SFVGKPVKFAPSLSDGLGGGGRFTMRKTGGRPKPAVSGSPWYGADRVKYLGPFSGEPPSY 180
+F GK VK +PS S+ + G GRFTMRKT + KP SGSPWYG DRVKYLGPFSGE PSY
Sbjct: 12 TFAGKAVKLSPSSSE-ITGNGRFTMRKTATKAKPVSSGSPWYGPDRVKYLGPFSGEAPSY 70
Query: 181 LTGEFPGD 204
LTGEFPGD
Sbjct: 71 LTGEFPGD 78
>ref|XP_006356075.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
isoform X1 [Solanum tuberosum]
Length = 267
Score = 103 bits (258), Expect = 2e-20
Identities = 50/68 (73%), Positives = 54/68 (79%)
Frame = +1
Query: 1 SFVGKPVKFAPSLSDGLGGGGRFTMRKTGGRPKPAVSGSPWYGADRVKYLGPFSGEPPSY 180
SF GK VK +PS S+ + G GR TMRKT + KPA SGSPWYG DRVKYLGPFSGE PSY
Sbjct: 12 SFAGKAVKLSPSSSE-ITGNGRVTMRKTATKAKPASSGSPWYGPDRVKYLGPFSGESPSY 70
Query: 181 LTGEFPGD 204
LTGEFPGD
Sbjct: 71 LTGEFPGD 78
>dbj|BAA25396.1| light harvesting chlorophyll a/b-binding protein [Nicotiana
sylvestris]
Length = 267
Score = 102 bits (255), Expect = 4e-20
Identities = 49/68 (72%), Positives = 54/68 (79%)
Frame = +1
Query: 1 SFVGKPVKFAPSLSDGLGGGGRFTMRKTGGRPKPAVSGSPWYGADRVKYLGPFSGEPPSY 180
SFVGK VK +PS S+ + G G+ TMRKT + KP SGSPWYG DRVKYLGPFSGE PSY
Sbjct: 12 SFVGKAVKLSPSSSE-ITGNGKVTMRKTATKAKPVSSGSPWYGPDRVKYLGPFSGESPSY 70
Query: 181 LTGEFPGD 204
LTGEFPGD
Sbjct: 71 LTGEFPGD 78
>gb|AAA34148.1| chlorophyll a/b-binding protein Cab-3C [Solanum lycopersicum]
Length = 267
Score = 102 bits (255), Expect = 4e-20
Identities = 49/68 (72%), Positives = 54/68 (79%)
Frame = +1
Query: 1 SFVGKPVKFAPSLSDGLGGGGRFTMRKTGGRPKPAVSGSPWYGADRVKYLGPFSGEPPSY 180
+F GK VK +PS S+ + G GR TMRKT + KPA SGSPWYG DRVKYLGPFSGE PSY
Sbjct: 12 TFAGKAVKLSPSSSE-ITGNGRVTMRKTATKAKPASSGSPWYGPDRVKYLGPFSGESPSY 70
Query: 181 LTGEFPGD 204
LTGEFPGD
Sbjct: 71 LTGEFPGD 78
>sp|P07369.1|CB2G_SOLLC RecName: Full=Chlorophyll a-b binding protein 3C, chloroplastic;
AltName: Full=LHCII type I CAB-3C; Short=LHCP; Flags:
Precursor gi|224932|prf||1204205G protein 3C,chlorophyll
binding
Length = 267
Score = 102 bits (255), Expect = 4e-20
Identities = 49/68 (72%), Positives = 54/68 (79%)
Frame = +1
Query: 1 SFVGKPVKFAPSLSDGLGGGGRFTMRKTGGRPKPAVSGSPWYGADRVKYLGPFSGEPPSY 180
+F GK VK +PS S+ + G GR TMRKT + KPA SGSPWYG DRVKYLGPFSGE PSY
Sbjct: 12 TFAGKAVKLSPSSSE-ITGNGRVTMRKTATKAKPASSGSPWYGPDRVKYLGPFSGESPSY 70
Query: 181 LTGEFPGD 204
LTGEFPGD
Sbjct: 71 LTGEFPGD 78
>gb|ABF69952.1| chlorophyll A-B binding protein (CAB), putative [Musa acuminata]
Length = 265
Score = 102 bits (255), Expect = 4e-20
Identities = 52/68 (76%), Positives = 54/68 (79%)
Frame = +1
Query: 1 SFVGKPVKFAPSLSDGLGGGGRFTMRKTGGRPKPAVSGSPWYGADRVKYLGPFSGEPPSY 180
SF GK VK APS S G+ G GR TMRK GG+P A SGSPWYG DRVKYLGP SGEPPSY
Sbjct: 11 SFAGKAVKLAPSAS-GVLGQGRVTMRKAGGKPA-ASSGSPWYGPDRVKYLGPLSGEPPSY 68
Query: 181 LTGEFPGD 204
LTGEFPGD
Sbjct: 69 LTGEFPGD 76
>ref|XP_006356078.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
[Solanum tuberosum]
Length = 267
Score = 102 bits (254), Expect = 5e-20
Identities = 49/68 (72%), Positives = 54/68 (79%)
Frame = +1
Query: 1 SFVGKPVKFAPSLSDGLGGGGRFTMRKTGGRPKPAVSGSPWYGADRVKYLGPFSGEPPSY 180
+F GK VK +PS S+ + G GR TMRKT + KPA SGSPWYG DRVKYLGPFSGE PSY
Sbjct: 12 TFAGKAVKLSPSSSE-VTGNGRVTMRKTATKAKPASSGSPWYGPDRVKYLGPFSGESPSY 70
Query: 181 LTGEFPGD 204
LTGEFPGD
Sbjct: 71 LTGEFPGD 78