BLASTX nr result

ID: Zingiber24_contig00000290 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00000290
         (440 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAK03553.1| predicted protein [Hordeum vulgare subsp. vulgare]     59   9e-07
ref|XP_006646222.1| PREDICTED: probable serine/threonine-protein...    56   4e-06
ref|XP_004232341.1| PREDICTED: probable receptor-like protein ki...    55   7e-06

>dbj|BAK03553.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 698

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 40/98 (40%), Positives = 50/98 (51%), Gaps = 11/98 (11%)
 Frame = -2

Query: 268 MLLPVASHGDYSCPNSTSVPCGSVSISYPFWLSD----------EPNQISPHVCGHQSFM 119
           +L   ASHGD +C    SV CG +++ YPF L +          EP Q S   CG+    
Sbjct: 14  VLFAAASHGDPTCQLEPSV-CGDLTVRYPFHLYNGTDEALTGYGEPPQSS--YCGYPGLA 70

Query: 118 LTNHSNIPMLRLG-DDNLYRVLDINYYYKVVSLADDDI 8
           +    + P LRLG DD  Y V DINY    VSLAD D+
Sbjct: 71  IVCDDDKPFLRLGADDYTYTVSDINYTSLTVSLADADV 108


>ref|XP_006646222.1| PREDICTED: probable serine/threonine-protein kinase At1g18390-like
           [Oryza brachyantha]
          Length = 988

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 35/91 (38%), Positives = 50/91 (54%), Gaps = 7/91 (7%)
 Frame = -2

Query: 253 ASHGDYSCPNSTSVPCGSVSISYPFWLSD---EPNQISPHVCGHQSFMLT----NHSNIP 95
           ++H    CP S  + CG+V ISYPF+LS+   E N  +   CG+    ++      ++ P
Sbjct: 32  STHSTSICPKS-GIKCGTVDISYPFYLSNATGETNDYNRFSCGYTDLKISCIWDGKNDTP 90

Query: 94  MLRLGDDNLYRVLDINYYYKVVSLADDDIRR 2
           +++LG DN Y VLDI Y    V LAD D  R
Sbjct: 91  IIQLGGDN-YTVLDIRYDTFTVVLADTDALR 120


>ref|XP_004232341.1| PREDICTED: probable receptor-like protein kinase At1g67000-like
           [Solanum lycopersicum]
          Length = 657

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 28/67 (41%), Positives = 40/67 (59%)
 Frame = -2

Query: 208 CGSVSISYPFWLSDEPNQISPHVCGHQSFMLTNHSNIPMLRLGDDNLYRVLDINYYYKVV 29
           CGS+ I YPFW   +     P  CGH SF +   SNIP + + +   Y+V+DIN   ++V
Sbjct: 40  CGSMDIVYPFWGGSK-----PEYCGHPSFEIKCESNIPKITI-ESTRYQVIDINTPNRIV 93

Query: 28  SLADDDI 8
           +LA DD+
Sbjct: 94  TLARDDL 100


Top