BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00000207
         (1486 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006841548.1| hypothetical protein AMTR_s00003p00168720 [A...   733   0.0  
ref|XP_002278318.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   728   0.0  
gb|EEC76452.1| hypothetical protein OsI_14162 [Oryza sativa Indi...   725   0.0  
ref|NP_001051773.1| Os03g0827700 [Oryza sativa Japonica Group] g...   725   0.0  
gb|ABF99668.1| DEAD/DEAH box helicase family protein, expressed ...   725   0.0  
gb|ABF99667.1| DEAD/DEAH box helicase family protein, expressed ...   725   0.0  
sp|Q0DM51.2|RH3_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA h...   725   0.0  
ref|XP_002512602.1| dead box ATP-dependent RNA helicase, putativ...   723   0.0  
ref|XP_006650834.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   723   0.0  
gb|ACG27839.1| nucleolar RNA helicase 2 [Zea mays]                    716   0.0  
ref|XP_004981197.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   715   0.0  
dbj|BAD21122.1| ATP-dependent RNA helicase [Hordeum vulgare subs...   715   0.0  
ref|XP_003563193.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   715   0.0  
ref|XP_003563192.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   715   0.0  
tpg|DAA52300.1| TPA: putative DEAD-box ATP-dependent RNA helicas...   714   0.0  
ref|NP_001130659.1| uncharacterized protein LOC100191761 [Zea ma...   714   0.0  
gb|AFW67097.1| putative DEAD-box ATP-dependent RNA helicase fami...   714   0.0  
gb|EMS52116.1| DEAD-box ATP-dependent RNA helicase 3, chloroplas...   713   0.0  
ref|XP_006480316.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   711   0.0  
ref|XP_006480317.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   711   0.0  

>ref|XP_006841548.1| hypothetical protein AMTR_s00003p00168720 [Amborella trichopoda]
            gi|548843569|gb|ERN03223.1| hypothetical protein
            AMTR_s00003p00168720 [Amborella trichopoda]
          Length = 768

 Score =  733 bits (1891), Expect = 0.0
 Identities = 373/489 (76%), Positives = 418/489 (85%)
 Frame = -1

Query: 1486 AYNIQKNSLSRGVDVVVGTPGRIIDLINDDSLRLGEVQYLVLDEADQMLAVGFEEDVEVI 1307
            +YNIQ+N+L+RGVDVVVGTPGRIIDL+N +SL+LGEVQYLVLDEADQMLAVGFEEDVEVI
Sbjct: 238  SYNIQQNALTRGVDVVVGTPGRIIDLVNGNSLQLGEVQYLVLDEADQMLAVGFEEDVEVI 297

Query: 1306 LQKLPPQRQNMLFSATMPGWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAISTTATS 1127
            L+KLP  RQ+MLFSATMPGWVKKL+R+YL+NP+TIDLVGDQ+EKLAEGIKLYAI TTAT+
Sbjct: 298  LEKLPTGRQSMLFSATMPGWVKKLARKYLDNPMTIDLVGDQEEKLAEGIKLYAIPTTATT 357

Query: 1126 KRTILSDLITVYAKGGKTIVFTQTKRDADEVSMALSNSIASEALHGDISQHQRERTLGGF 947
            KRTIL DLITVYAKGGKTIVFTQTKRDADEVS+AL++SI SEALHGDISQHQRERTL GF
Sbjct: 358  KRTILGDLITVYAKGGKTIVFTQTKRDADEVSLALTSSITSEALHGDISQHQRERTLNGF 417

Query: 946  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGNAILMFTS 767
            RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEG AILMFT 
Sbjct: 418  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTG 477

Query: 766  SQRRTVKSLERDVGCRFEFVSPPSMQEVLESSAEQVVATLRGVHADSIQYFLPTAQRLTD 587
            SQRRT+KSLERDVGC FEF+SPP M+EVLESSAEQVVATL+GVH +SIQ+FLP AQR+ +
Sbjct: 478  SQRRTIKSLERDVGCSFEFISPPQMEEVLESSAEQVVATLKGVHPESIQFFLPAAQRMIE 537

Query: 586  EQGTXXXXXXXXXLSGFSQPPSSRSLISHEQGWVTLQLTREPGYSRGYFSARSVTGFLSD 407
            EQGT         LSGFSQPPSSRSL++HEQGWVTLQLTRE G+SRG+ SARSVTGFLSD
Sbjct: 538  EQGTDALAAALAHLSGFSQPPSSRSLVTHEQGWVTLQLTREQGFSRGFLSARSVTGFLSD 597

Query: 406  VYPDAADEVGKICMIADEKVQGAVFDLPEEIAKELLTKQLPPGNSLVKITKLPILQDDGP 227
            +YP AADEVGKI +IADE+VQGAVFDLPEEIAKELLTKQ PPGN++ KITKLP LQDDGP
Sbjct: 598  IYPAAADEVGKIHLIADERVQGAVFDLPEEIAKELLTKQTPPGNTISKITKLPPLQDDGP 657

Query: 226  ATDFYGRFXXXXXXXXXXXXXXXXXXXXXSWGGRNYDSDDSYGRGGRISDDSYGWGGRAS 47
            + D YGRF                     +WG  + D +D + RGGR       + G +S
Sbjct: 658  SGDNYGRFPSRDRGGRGGLRDRGGFRGSRNWGRSDSDDEDQFRRGGR------NFRGGSS 711

Query: 46   RTDSSWSRN 20
            ++ +SW  N
Sbjct: 712  QSRNSWRSN 720


>ref|XP_002278318.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic
            [Vitis vinifera] gi|296089875|emb|CBI39694.3| unnamed
            protein product [Vitis vinifera]
          Length = 764

 Score =  728 bits (1879), Expect = 0.0
 Identities = 377/495 (76%), Positives = 419/495 (84%)
 Frame = -1

Query: 1486 AYNIQKNSLSRGVDVVVGTPGRIIDLINDDSLRLGEVQYLVLDEADQMLAVGFEEDVEVI 1307
            +Y  Q+N+LSRGVDVVVGTPGRIIDLI  +SL+LGEVQ LVLDEADQMLAVGFEEDVEVI
Sbjct: 231  SYITQQNALSRGVDVVVGTPGRIIDLIKGNSLKLGEVQNLVLDEADQMLAVGFEEDVEVI 290

Query: 1306 LQKLPPQRQNMLFSATMPGWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAISTTATS 1127
            L+KLP +RQ+MLFSATMP WVKKL+R+YL+NPLTIDLVGD DEKLAEGIKLYAI TTATS
Sbjct: 291  LEKLPSERQSMLFSATMPAWVKKLARKYLDNPLTIDLVGDHDEKLAEGIKLYAIPTTATS 350

Query: 1126 KRTILSDLITVYAKGGKTIVFTQTKRDADEVSMALSNSIASEALHGDISQHQRERTLGGF 947
            KRTILSDLITVYAKGGKTIVFTQTKRDADEVSMAL+NSIASEALHGDISQHQRERTL GF
Sbjct: 351  KRTILSDLITVYAKGGKTIVFTQTKRDADEVSMALTNSIASEALHGDISQHQRERTLNGF 410

Query: 946  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGNAILMFTS 767
            RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEG AILMFTS
Sbjct: 411  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTS 470

Query: 766  SQRRTVKSLERDVGCRFEFVSPPSMQEVLESSAEQVVATLRGVHADSIQYFLPTAQRLTD 587
            SQRRTVKSLERDVGC+FEF+SPP+++EVLESSAEQVVATL GVH +S+++F PTAQ+L +
Sbjct: 471  SQRRTVKSLERDVGCKFEFISPPAIEEVLESSAEQVVATLNGVHPESVEFFTPTAQKLIE 530

Query: 586  EQGTXXXXXXXXXLSGFSQPPSSRSLISHEQGWVTLQLTREPGYSRGYFSARSVTGFLSD 407
            E+GT         LSGFSQPPS RSLISHEQGWVTLQLTR+ GYSRG+ SARSVTGFLSD
Sbjct: 531  EKGTGALAAALAHLSGFSQPPSFRSLISHEQGWVTLQLTRDSGYSRGFLSARSVTGFLSD 590

Query: 406  VYPDAADEVGKICMIADEKVQGAVFDLPEEIAKELLTKQLPPGNSLVKITKLPILQDDGP 227
            VYP AADE+GKI ++ADE+VQGAVFDLPEEIAKELL KQ+PPGN++ KITKLP LQDDGP
Sbjct: 591  VYPTAADELGKIYLVADERVQGAVFDLPEEIAKELLNKQMPPGNTISKITKLPALQDDGP 650

Query: 226  ATDFYGRFXXXXXXXXXXXXXXXXXXXXXSWGGRNYDSDDSYGRGGRISDDSYGWGGRAS 47
            A D+YGRF                        G ++ SDD  G      DD    GGR+ 
Sbjct: 651  AGDYYGRFSNRDRSSRGGSRERRGSRISRG-RGSSWGSDDDGG------DDLNRRGGRSF 703

Query: 46   RTDSSWSRNTKPRRD 2
            R++++WSRN +   D
Sbjct: 704  RSNNNWSRNLRTSED 718


>gb|EEC76452.1| hypothetical protein OsI_14162 [Oryza sativa Indica Group]
          Length = 779

 Score =  725 bits (1871), Expect = 0.0
 Identities = 373/498 (74%), Positives = 418/498 (83%), Gaps = 8/498 (1%)
 Frame = -1

Query: 1486 AYNIQKNSLSRGVDVVVGTPGRIIDLINDDSLRLGEVQYLVLDEADQMLAVGFEEDVEVI 1307
            +YN+Q+N+LSRGVDVVVGTPGRIIDLIN  SL+LGEV+YLVLDEADQMLAVGFEEDVE I
Sbjct: 238  SYNVQQNALSRGVDVVVGTPGRIIDLINGGSLQLGEVKYLVLDEADQMLAVGFEEDVETI 297

Query: 1306 LQKLPPQRQNMLFSATMPGWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAISTTATS 1127
            LQ+LP +RQ+MLFSATMPGWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAI  T+TS
Sbjct: 298  LQQLPAERQSMLFSATMPGWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAIPLTSTS 357

Query: 1126 KRTILSDLITVYAKGGKTIVFTQTKRDADEVSMALSNSIASEALHGDISQHQRERTLGGF 947
            KRT+LSDLITVYAKGGKTIVFT+TKRDADEVS+AL+NSIASEALHGDISQHQRERTL GF
Sbjct: 358  KRTVLSDLITVYAKGGKTIVFTKTKRDADEVSLALTNSIASEALHGDISQHQRERTLNGF 417

Query: 946  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGNAILMFTS 767
            RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGK G AILMFT+
Sbjct: 418  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKAGTAILMFTN 477

Query: 766  SQRRTVKSLERDVGCRFEFVSPPSMQEVLESSAEQVVATLRGVHADSIQYFLPTAQRLTD 587
            SQRRTV+SLERDVGCRF+F+SPP++++VLESSAE V+ATLRGVH +SIQYF+P A+RL +
Sbjct: 478  SQRRTVRSLERDVGCRFDFISPPAIEDVLESSAEHVIATLRGVHTESIQYFIPAAERLQE 537

Query: 586  EQGTXXXXXXXXXLSGFSQPPSSRSLISHEQGWVTLQLTREPGYSRGYFSARSVTGFLSD 407
            E G          LSGFSQPPSSRSLISHEQGWVTLQLTR+PGY RG+FS RSVTGFLSD
Sbjct: 538  ELGPNALASALAHLSGFSQPPSSRSLISHEQGWVTLQLTRDPGYGRGFFSPRSVTGFLSD 597

Query: 406  VYPDAADEVGKICMIADEKVQGAVFDLPEEIAKELLTKQLPPGNSLVKITKLPILQDDGP 227
            V   AADEVGKI + ADEKVQGAVFDLPEEIA++LL+ +LPPGN++ K+TKLP LQDDGP
Sbjct: 598  VSSAAADEVGKIFLTADEKVQGAVFDLPEEIARDLLSMELPPGNTITKVTKLPALQDDGP 657

Query: 226  ATDFYGRFXXXXXXXXXXXXXXXXXXXXXSWGGRNYDSDDSYGRGGRI--------SDDS 71
            ATD YGRF                       GG + D +D + RGGR         SDD 
Sbjct: 658  ATDSYGRFSNSDRGFRNRRSRGGGSRGGR--GGWDSDGEDRFRRGGRSFRSDNDSWSDDD 715

Query: 70   YGWGGRASRTDSSWSRNT 17
            +G G R++R+ S   R +
Sbjct: 716  FGGGRRSNRSSSFGGRGS 733


>ref|NP_001051773.1| Os03g0827700 [Oryza sativa Japonica Group]
            gi|113550244|dbj|BAF13687.1| Os03g0827700, partial [Oryza
            sativa Japonica Group]
          Length = 723

 Score =  725 bits (1871), Expect = 0.0
 Identities = 373/498 (74%), Positives = 418/498 (83%), Gaps = 8/498 (1%)
 Frame = -1

Query: 1486 AYNIQKNSLSRGVDVVVGTPGRIIDLINDDSLRLGEVQYLVLDEADQMLAVGFEEDVEVI 1307
            +YN+Q+N+LSRGVDVVVGTPGRIIDLIN  SL+LGEV+YLVLDEADQMLAVGFEEDVE I
Sbjct: 182  SYNVQQNALSRGVDVVVGTPGRIIDLINGGSLQLGEVKYLVLDEADQMLAVGFEEDVETI 241

Query: 1306 LQKLPPQRQNMLFSATMPGWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAISTTATS 1127
            LQ+LP +RQ+MLFSATMPGWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAI  T+TS
Sbjct: 242  LQQLPAERQSMLFSATMPGWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAIPLTSTS 301

Query: 1126 KRTILSDLITVYAKGGKTIVFTQTKRDADEVSMALSNSIASEALHGDISQHQRERTLGGF 947
            KRT+LSDLITVYAKGGKTIVFT+TKRDADEVS+AL+NSIASEALHGDISQHQRERTL GF
Sbjct: 302  KRTVLSDLITVYAKGGKTIVFTKTKRDADEVSLALTNSIASEALHGDISQHQRERTLNGF 361

Query: 946  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGNAILMFTS 767
            RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGK G AILMFT+
Sbjct: 362  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKAGTAILMFTN 421

Query: 766  SQRRTVKSLERDVGCRFEFVSPPSMQEVLESSAEQVVATLRGVHADSIQYFLPTAQRLTD 587
            SQRRTV+SLERDVGCRF+F+SPP++++VLESSAE V+ATLRGVH +SIQYF+P A+RL +
Sbjct: 422  SQRRTVRSLERDVGCRFDFISPPAIEDVLESSAEHVIATLRGVHTESIQYFIPAAERLQE 481

Query: 586  EQGTXXXXXXXXXLSGFSQPPSSRSLISHEQGWVTLQLTREPGYSRGYFSARSVTGFLSD 407
            E G          LSGFSQPPSSRSLISHEQGWVTLQLTR+PGY RG+FS RSVTGFLSD
Sbjct: 482  ELGPNALASALAHLSGFSQPPSSRSLISHEQGWVTLQLTRDPGYGRGFFSPRSVTGFLSD 541

Query: 406  VYPDAADEVGKICMIADEKVQGAVFDLPEEIAKELLTKQLPPGNSLVKITKLPILQDDGP 227
            V   AADEVGKI + ADEKVQGAVFDLPEEIA++LL+ +LPPGN++ K+TKLP LQDDGP
Sbjct: 542  VSSAAADEVGKIFLTADEKVQGAVFDLPEEIARDLLSMELPPGNTITKVTKLPALQDDGP 601

Query: 226  ATDFYGRFXXXXXXXXXXXXXXXXXXXXXSWGGRNYDSDDSYGRGGRI--------SDDS 71
            ATD YGRF                       GG + D +D + RGGR         SDD 
Sbjct: 602  ATDSYGRFSNSDRGFRNRRSRGGGSRGGR--GGWDSDGEDRFRRGGRSFRSDNDSWSDDD 659

Query: 70   YGWGGRASRTDSSWSRNT 17
            +G G R++R+ S   R +
Sbjct: 660  FGGGRRSNRSSSFGGRGS 677


>gb|ABF99668.1| DEAD/DEAH box helicase family protein, expressed [Oryza sativa
            Japonica Group]
          Length = 596

 Score =  725 bits (1871), Expect = 0.0
 Identities = 373/498 (74%), Positives = 418/498 (83%), Gaps = 8/498 (1%)
 Frame = -1

Query: 1486 AYNIQKNSLSRGVDVVVGTPGRIIDLINDDSLRLGEVQYLVLDEADQMLAVGFEEDVEVI 1307
            +YN+Q+N+LSRGVDVVVGTPGRIIDLIN  SL+LGEV+YLVLDEADQMLAVGFEEDVE I
Sbjct: 56   SYNVQQNALSRGVDVVVGTPGRIIDLINGGSLQLGEVKYLVLDEADQMLAVGFEEDVETI 115

Query: 1306 LQKLPPQRQNMLFSATMPGWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAISTTATS 1127
            LQ+LP +RQ+MLFSATMPGWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAI  T+TS
Sbjct: 116  LQQLPAERQSMLFSATMPGWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAIPLTSTS 175

Query: 1126 KRTILSDLITVYAKGGKTIVFTQTKRDADEVSMALSNSIASEALHGDISQHQRERTLGGF 947
            KRT+LSDLITVYAKGGKTIVFT+TKRDADEVS+AL+NSIASEALHGDISQHQRERTL GF
Sbjct: 176  KRTVLSDLITVYAKGGKTIVFTKTKRDADEVSLALTNSIASEALHGDISQHQRERTLNGF 235

Query: 946  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGNAILMFTS 767
            RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGK G AILMFT+
Sbjct: 236  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKAGTAILMFTN 295

Query: 766  SQRRTVKSLERDVGCRFEFVSPPSMQEVLESSAEQVVATLRGVHADSIQYFLPTAQRLTD 587
            SQRRTV+SLERDVGCRF+F+SPP++++VLESSAE V+ATLRGVH +SIQYF+P A+RL +
Sbjct: 296  SQRRTVRSLERDVGCRFDFISPPAIEDVLESSAEHVIATLRGVHTESIQYFIPAAERLQE 355

Query: 586  EQGTXXXXXXXXXLSGFSQPPSSRSLISHEQGWVTLQLTREPGYSRGYFSARSVTGFLSD 407
            E G          LSGFSQPPSSRSLISHEQGWVTLQLTR+PGY RG+FS RSVTGFLSD
Sbjct: 356  ELGPNALASALAHLSGFSQPPSSRSLISHEQGWVTLQLTRDPGYGRGFFSPRSVTGFLSD 415

Query: 406  VYPDAADEVGKICMIADEKVQGAVFDLPEEIAKELLTKQLPPGNSLVKITKLPILQDDGP 227
            V   AADEVGKI + ADEKVQGAVFDLPEEIA++LL+ +LPPGN++ K+TKLP LQDDGP
Sbjct: 416  VSSAAADEVGKIFLTADEKVQGAVFDLPEEIARDLLSMELPPGNTITKVTKLPALQDDGP 475

Query: 226  ATDFYGRFXXXXXXXXXXXXXXXXXXXXXSWGGRNYDSDDSYGRGGRI--------SDDS 71
            ATD YGRF                       GG + D +D + RGGR         SDD 
Sbjct: 476  ATDSYGRFSNSDRGFRNRRSRGGGSRGGR--GGWDSDGEDRFRRGGRSFRSDNDSWSDDD 533

Query: 70   YGWGGRASRTDSSWSRNT 17
            +G G R++R+ S   R +
Sbjct: 534  FGGGRRSNRSSSFGGRGS 551


>gb|ABF99667.1| DEAD/DEAH box helicase family protein, expressed [Oryza sativa
            Japonica Group] gi|215686855|dbj|BAG89705.1| unnamed
            protein product [Oryza sativa Japonica Group]
          Length = 597

 Score =  725 bits (1871), Expect = 0.0
 Identities = 373/498 (74%), Positives = 418/498 (83%), Gaps = 8/498 (1%)
 Frame = -1

Query: 1486 AYNIQKNSLSRGVDVVVGTPGRIIDLINDDSLRLGEVQYLVLDEADQMLAVGFEEDVEVI 1307
            +YN+Q+N+LSRGVDVVVGTPGRIIDLIN  SL+LGEV+YLVLDEADQMLAVGFEEDVE I
Sbjct: 56   SYNVQQNALSRGVDVVVGTPGRIIDLINGGSLQLGEVKYLVLDEADQMLAVGFEEDVETI 115

Query: 1306 LQKLPPQRQNMLFSATMPGWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAISTTATS 1127
            LQ+LP +RQ+MLFSATMPGWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAI  T+TS
Sbjct: 116  LQQLPAERQSMLFSATMPGWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAIPLTSTS 175

Query: 1126 KRTILSDLITVYAKGGKTIVFTQTKRDADEVSMALSNSIASEALHGDISQHQRERTLGGF 947
            KRT+LSDLITVYAKGGKTIVFT+TKRDADEVS+AL+NSIASEALHGDISQHQRERTL GF
Sbjct: 176  KRTVLSDLITVYAKGGKTIVFTKTKRDADEVSLALTNSIASEALHGDISQHQRERTLNGF 235

Query: 946  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGNAILMFTS 767
            RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGK G AILMFT+
Sbjct: 236  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKAGTAILMFTN 295

Query: 766  SQRRTVKSLERDVGCRFEFVSPPSMQEVLESSAEQVVATLRGVHADSIQYFLPTAQRLTD 587
            SQRRTV+SLERDVGCRF+F+SPP++++VLESSAE V+ATLRGVH +SIQYF+P A+RL +
Sbjct: 296  SQRRTVRSLERDVGCRFDFISPPAIEDVLESSAEHVIATLRGVHTESIQYFIPAAERLQE 355

Query: 586  EQGTXXXXXXXXXLSGFSQPPSSRSLISHEQGWVTLQLTREPGYSRGYFSARSVTGFLSD 407
            E G          LSGFSQPPSSRSLISHEQGWVTLQLTR+PGY RG+FS RSVTGFLSD
Sbjct: 356  ELGPNALASALAHLSGFSQPPSSRSLISHEQGWVTLQLTRDPGYGRGFFSPRSVTGFLSD 415

Query: 406  VYPDAADEVGKICMIADEKVQGAVFDLPEEIAKELLTKQLPPGNSLVKITKLPILQDDGP 227
            V   AADEVGKI + ADEKVQGAVFDLPEEIA++LL+ +LPPGN++ K+TKLP LQDDGP
Sbjct: 416  VSSAAADEVGKIFLTADEKVQGAVFDLPEEIARDLLSMELPPGNTITKVTKLPALQDDGP 475

Query: 226  ATDFYGRFXXXXXXXXXXXXXXXXXXXXXSWGGRNYDSDDSYGRGGRI--------SDDS 71
            ATD YGRF                       GG + D +D + RGGR         SDD 
Sbjct: 476  ATDSYGRFSNSDRGFRNRRSRGGGSRGGR--GGWDSDGEDRFRRGGRSFRSDNDSWSDDD 533

Query: 70   YGWGGRASRTDSSWSRNT 17
            +G G R++R+ S   R +
Sbjct: 534  FGGGRRSNRSSSFGGRGS 551


>sp|Q0DM51.2|RH3_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 3, chloroplastic;
            Flags: Precursor gi|18855061|gb|AAL79753.1|AC096687_17
            putative RNA helicase [Oryza sativa Japonica Group]
          Length = 758

 Score =  725 bits (1871), Expect = 0.0
 Identities = 373/498 (74%), Positives = 418/498 (83%), Gaps = 8/498 (1%)
 Frame = -1

Query: 1486 AYNIQKNSLSRGVDVVVGTPGRIIDLINDDSLRLGEVQYLVLDEADQMLAVGFEEDVEVI 1307
            +YN+Q+N+LSRGVDVVVGTPGRIIDLIN  SL+LGEV+YLVLDEADQMLAVGFEEDVE I
Sbjct: 217  SYNVQQNALSRGVDVVVGTPGRIIDLINGGSLQLGEVKYLVLDEADQMLAVGFEEDVETI 276

Query: 1306 LQKLPPQRQNMLFSATMPGWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAISTTATS 1127
            LQ+LP +RQ+MLFSATMPGWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAI  T+TS
Sbjct: 277  LQQLPAERQSMLFSATMPGWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAIPLTSTS 336

Query: 1126 KRTILSDLITVYAKGGKTIVFTQTKRDADEVSMALSNSIASEALHGDISQHQRERTLGGF 947
            KRT+LSDLITVYAKGGKTIVFT+TKRDADEVS+AL+NSIASEALHGDISQHQRERTL GF
Sbjct: 337  KRTVLSDLITVYAKGGKTIVFTKTKRDADEVSLALTNSIASEALHGDISQHQRERTLNGF 396

Query: 946  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGNAILMFTS 767
            RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGK G AILMFT+
Sbjct: 397  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKAGTAILMFTN 456

Query: 766  SQRRTVKSLERDVGCRFEFVSPPSMQEVLESSAEQVVATLRGVHADSIQYFLPTAQRLTD 587
            SQRRTV+SLERDVGCRF+F+SPP++++VLESSAE V+ATLRGVH +SIQYF+P A+RL +
Sbjct: 457  SQRRTVRSLERDVGCRFDFISPPAIEDVLESSAEHVIATLRGVHTESIQYFIPAAERLQE 516

Query: 586  EQGTXXXXXXXXXLSGFSQPPSSRSLISHEQGWVTLQLTREPGYSRGYFSARSVTGFLSD 407
            E G          LSGFSQPPSSRSLISHEQGWVTLQLTR+PGY RG+FS RSVTGFLSD
Sbjct: 517  ELGPNALASALAHLSGFSQPPSSRSLISHEQGWVTLQLTRDPGYGRGFFSPRSVTGFLSD 576

Query: 406  VYPDAADEVGKICMIADEKVQGAVFDLPEEIAKELLTKQLPPGNSLVKITKLPILQDDGP 227
            V   AADEVGKI + ADEKVQGAVFDLPEEIA++LL+ +LPPGN++ K+TKLP LQDDGP
Sbjct: 577  VSSAAADEVGKIFLTADEKVQGAVFDLPEEIARDLLSMELPPGNTITKVTKLPALQDDGP 636

Query: 226  ATDFYGRFXXXXXXXXXXXXXXXXXXXXXSWGGRNYDSDDSYGRGGRI--------SDDS 71
            ATD YGRF                       GG + D +D + RGGR         SDD 
Sbjct: 637  ATDSYGRFSNSDRGFRNRRSRGGGSRGGR--GGWDSDGEDRFRRGGRSFRSDNDSWSDDD 694

Query: 70   YGWGGRASRTDSSWSRNT 17
            +G G R++R+ S   R +
Sbjct: 695  FGGGRRSNRSSSFGGRGS 712


>ref|XP_002512602.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223548563|gb|EEF50054.1| dead box ATP-dependent RNA
            helicase, putative [Ricinus communis]
          Length = 772

 Score =  723 bits (1867), Expect = 0.0
 Identities = 375/491 (76%), Positives = 411/491 (83%), Gaps = 10/491 (2%)
 Frame = -1

Query: 1486 AYNIQKNSLSRGVDVVVGTPGRIIDLINDDSLRLGEVQYLVLDEADQMLAVGFEEDVEVI 1307
            +Y  Q+N+LSRGVDVVVGTPGRIIDLIN  SL+LGEV+YLVLDEADQML+ GFEEDVEVI
Sbjct: 233  SYITQRNALSRGVDVVVGTPGRIIDLINSGSLKLGEVEYLVLDEADQMLSFGFEEDVEVI 292

Query: 1306 LQKLPPQRQNMLFSATMPGWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAISTTATS 1127
            L+ LP +RQ+MLFSATMP WVKKL+R+YL+NPL IDLVGDQ+EKLAEGIKLYAIST ATS
Sbjct: 293  LENLPSKRQSMLFSATMPTWVKKLARKYLDNPLQIDLVGDQEEKLAEGIKLYAISTNATS 352

Query: 1126 KRTILSDLITVYAKGGKTIVFTQTKRDADEVSMALSNSIASEALHGDISQHQRERTLGGF 947
            KR+ILSDL+TVYAKGGKTI+FTQTKRDADEVSM L+NSIASEALHGDISQHQRERTL GF
Sbjct: 353  KRSILSDLVTVYAKGGKTIIFTQTKRDADEVSMVLTNSIASEALHGDISQHQRERTLNGF 412

Query: 946  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGNAILMFTS 767
            RQGKFTVLVATDVA+RGLDIPNVDL+IHYELPNDPETFVHRSGRTGRAGKEG A+LMFTS
Sbjct: 413  RQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAVLMFTS 472

Query: 766  SQRRTVKSLERDVGCRFEFVSPPSMQEVLESSAEQVVATLRGVHADSIQYFLPTAQRLTD 587
            SQRRTVKSLERDVGCRFEFVSPP  +EVLESSAEQV+ATL GVH +S+ +F PTAQRL +
Sbjct: 473  SQRRTVKSLERDVGCRFEFVSPPGTEEVLESSAEQVIATLSGVHPESVGFFTPTAQRLIE 532

Query: 586  EQGTXXXXXXXXXLSGFSQPPSSRSLISHEQGWVTLQLTREPGYSRGYFSARSVTGFLSD 407
            EQGT         LSGFSQPPSSRSLISHEQGW TLQLTR+P YSRG+ SARSVTGFLSD
Sbjct: 533  EQGTSALAAALAQLSGFSQPPSSRSLISHEQGWTTLQLTRDPSYSRGFLSARSVTGFLSD 592

Query: 406  VYPDAADEVGKICMIADEKVQGAVFDLPEEIAKELLTKQLPPGNSLVKITKLPILQDDGP 227
            VY  AADEVGKI +IADEKVQGAVFDLPEEIAKELL KQLPPGN++ KITKLP LQDDGP
Sbjct: 593  VYTAAADEVGKIHIIADEKVQGAVFDLPEEIAKELLNKQLPPGNTISKITKLPSLQDDGP 652

Query: 226  ATDFYGRFXXXXXXXXXXXXXXXXXXXXXSWGG-----RNYDSDDSYGRGGR-----ISD 77
             +DFYGRF                      WGG      + D DD++ RGGR      SD
Sbjct: 653  PSDFYGRFSSRDRPPRGGGRGQRGSRSSQGWGGGRGGRNSDDDDDTFRRGGRSFSRSSSD 712

Query: 76   DSYGWGGRASR 44
            D    GGR+SR
Sbjct: 713  DWLIGGGRSSR 723


>ref|XP_006650834.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like
            [Oryza brachyantha]
          Length = 599

 Score =  723 bits (1865), Expect = 0.0
 Identities = 374/495 (75%), Positives = 414/495 (83%), Gaps = 1/495 (0%)
 Frame = -1

Query: 1486 AYNIQKNSLSRGVDVVVGTPGRIIDLINDDSLRLGEVQYLVLDEADQMLAVGFEEDVEVI 1307
            +YN+Q+N+LSRGVDVVVGTPGRIIDLIN  SL+LGEV+YLVLDEADQMLAVGFEEDVE I
Sbjct: 56   SYNVQQNALSRGVDVVVGTPGRIIDLINGGSLQLGEVKYLVLDEADQMLAVGFEEDVETI 115

Query: 1306 LQKLPPQRQNMLFSATMPGWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAISTTATS 1127
            LQ+LP +RQ+MLFSATMP WVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKL+AI  T+TS
Sbjct: 116  LQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLHAIPLTSTS 175

Query: 1126 KRTILSDLITVYAKGGKTIVFTQTKRDADEVSMALSNSIASEALHGDISQHQRERTLGGF 947
            KRT+LSDLITVYAKGGKTIVFT+TKRDADEVS+AL+NSIASEALHGDISQHQRERTL GF
Sbjct: 176  KRTVLSDLITVYAKGGKTIVFTKTKRDADEVSLALTNSIASEALHGDISQHQRERTLNGF 235

Query: 946  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGNAILMFTS 767
            RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGK G AILMFT+
Sbjct: 236  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKAGTAILMFTN 295

Query: 766  SQRRTVKSLERDVGCRFEFVSPPSMQEVLESSAEQVVATLRGVHADSIQYFLPTAQRLTD 587
            SQRRTV+SLERDVGCRFEF+SPP+++EVLESSAE V+ATLRGVHA+SIQYF+P A+RLT+
Sbjct: 296  SQRRTVRSLERDVGCRFEFISPPAIEEVLESSAEHVIATLRGVHAESIQYFIPAAERLTE 355

Query: 586  EQGTXXXXXXXXXLSGFSQPPSSRSLISHEQGWVTLQLTREPGYSRGYFSARSVTGFLSD 407
            E G          LSGFSQPPSSRSLISHEQGWVTLQLTRE GY RG+FS RSVTGFLSD
Sbjct: 356  ELGPNALASALAHLSGFSQPPSSRSLISHEQGWVTLQLTREQGYGRGFFSPRSVTGFLSD 415

Query: 406  VYPDAADEVGKICMIADEKVQGAVFDLPEEIAKELLTKQLPPGNSLVKITKLPILQDDGP 227
            V   AADEVGKI +IADE+VQGAVFDLPEEIAK+LL+ +LPPGN++ K+TKLP LQDDGP
Sbjct: 416  VSSAAADEVGKIYLIADERVQGAVFDLPEEIAKDLLSMELPPGNTITKVTKLPALQDDGP 475

Query: 226  ATDFYGRFXXXXXXXXXXXXXXXXXXXXXSWGGRNYDSDDSYGRGGR-ISDDSYGWGGRA 50
            ATD YGRF                       GG + D +D + RGGR    D+  W    
Sbjct: 476  ATDSYGRFSNSDRGFRSRRTRGGSRGGR---GGWDSDGEDRFRRGGRSFRSDNDSW---- 528

Query: 49   SRTDSSWSRNTKPRR 5
            S  D  WS   +  R
Sbjct: 529  SEKDDDWSGGRRSNR 543


>gb|ACG27839.1| nucleolar RNA helicase 2 [Zea mays]
          Length = 744

 Score =  716 bits (1848), Expect = 0.0
 Identities = 375/494 (75%), Positives = 409/494 (82%), Gaps = 8/494 (1%)
 Frame = -1

Query: 1486 AYNIQKNSLSRGVDVVVGTPGRIIDLINDDSLRLGEVQYLVLDEADQMLAVGFEEDVEVI 1307
            +YN+Q+N+LSRGVDVVVGTPGRIIDLIN  SL+LGEVQYLVLDEADQMLAVGFEEDVE I
Sbjct: 201  SYNVQQNALSRGVDVVVGTPGRIIDLINGGSLQLGEVQYLVLDEADQMLAVGFEEDVETI 260

Query: 1306 LQKLPPQRQNMLFSATMPGWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAISTTATS 1127
            LQ+LP  RQ+MLFSATMP WVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAI  TATS
Sbjct: 261  LQQLPAGRQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAIPLTATS 320

Query: 1126 KRTILSDLITVYAKGGKTIVFTQTKRDADEVSMALSNSIASEALHGDISQHQRERTLGGF 947
            KRT+LSDLITVYAKGGKTIVFT+TK+DADEVS+AL+NSIASEALHGDISQHQRERTL GF
Sbjct: 321  KRTVLSDLITVYAKGGKTIVFTRTKKDADEVSLALTNSIASEALHGDISQHQRERTLNGF 380

Query: 946  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGNAILMFTS 767
            RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGK G AILMFTS
Sbjct: 381  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKAGTAILMFTS 440

Query: 766  SQRRTVKSLERDVGCRFEFVSPPSMQEVLESSAEQVVATLRGVHADSIQYFLPTAQRLTD 587
            SQ+RTVKSLERDVGC FEF+SPPS++EVLESSAE V+ATLRGVH +S +YFL  A++LT+
Sbjct: 441  SQKRTVKSLERDVGCNFEFISPPSIEEVLESSAEHVIATLRGVHPESTKYFLGAAEKLTE 500

Query: 586  EQGTXXXXXXXXXLSGFSQPPSSRSLISHEQGWVTLQLTREPGYSRGYFSARSVTGFLSD 407
            E G          LSGFSQPPSSRSLISHEQGWVTLQLTRE G+ RG+FS RSVTGFLSD
Sbjct: 501  ELGPHALASALAHLSGFSQPPSSRSLISHEQGWVTLQLTREQGFGRGFFSPRSVTGFLSD 560

Query: 406  VYPDAADEVGKICMIADEKVQGAVFDLPEEIAKELLTKQLPPGNSLVKITKLPILQDDGP 227
            V   AADEVGKI + ADE VQGAVFDLPEEIAK+LLT +LPPGN+L KI+KLP LQDDGP
Sbjct: 561  VCSAAADEVGKIYLTADENVQGAVFDLPEEIAKDLLTMELPPGNTLTKISKLPALQDDGP 620

Query: 226  ATDFYGRFXXXXXXXXXXXXXXXXXXXXXSWGGRNYDSDDSYGRGGRI--------SDDS 71
            ATD YGRF                       GG + D +D + RGGR         SDD 
Sbjct: 621  ATDSYGRFSNDRGSRNNRRSRGGGASRGR--GGWDTDGEDRFRRGGRSLRSDNDSWSDDD 678

Query: 70   YGWGGRASRTDSSW 29
            +  GGR S   SS+
Sbjct: 679  WSGGGRKSNRSSSF 692


>ref|XP_004981197.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like
            [Setaria italica]
          Length = 759

 Score =  715 bits (1845), Expect = 0.0
 Identities = 375/501 (74%), Positives = 411/501 (82%), Gaps = 15/501 (2%)
 Frame = -1

Query: 1486 AYNIQKNSLSRGVDVVVGTPGRIIDLINDDSLRLGEVQYLVLDEADQMLAVGFEEDVEVI 1307
            +YN+Q+N+LSRGVDVVVGTPGRIIDLIN  SL+LGEVQYLVLDEADQMLAVGFEEDVE I
Sbjct: 208  SYNVQQNALSRGVDVVVGTPGRIIDLINGGSLQLGEVQYLVLDEADQMLAVGFEEDVETI 267

Query: 1306 LQKLPPQRQNMLFSATMPGWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAISTTATS 1127
            LQ+LP +RQ+MLFSATMP WVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAI  TATS
Sbjct: 268  LQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAIPLTATS 327

Query: 1126 KRTILSDLITVYAKGGKTIVFTQTKRDADEVSMALSNSIASEALHGDISQHQRERTLGGF 947
            KRTILSDLITVYAKGGKTIVFT+TKRDADEVS+AL+NSIASEALHGDISQHQRERTL GF
Sbjct: 328  KRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALTNSIASEALHGDISQHQRERTLNGF 387

Query: 946  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGNAILMFTS 767
            RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGK G AILMFTS
Sbjct: 388  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKVGTAILMFTS 447

Query: 766  SQRRTVKSLERDVGCRFEFVSPPSMQEVLESSAEQVVATLRGVHADSIQYFLPTAQRLTD 587
            SQ+RTVKSLERDVGC+FEF+SPPSM+EVLESSAE V+ATLRGVH +S Q+FL  A+RLT+
Sbjct: 448  SQKRTVKSLERDVGCKFEFISPPSMEEVLESSAEHVIATLRGVHPESTQFFLGAAERLTE 507

Query: 586  EQGTXXXXXXXXXLSGFSQPPSSRSLISHEQGWVTLQLTREPGYSRGYFSARSVTGFLSD 407
            E G+         LSGFSQPPSSRSLISHEQGWVTLQLTR+PG+ RG+FS RSVTGFLSD
Sbjct: 508  ELGSHALASALAHLSGFSQPPSSRSLISHEQGWVTLQLTRDPGFGRGFFSPRSVTGFLSD 567

Query: 406  VYPDAADEVGKICMIADEKVQGAVFDLPEEIAKELLTKQLPPGNSLVKITKLPILQDDGP 227
            V   AADEVGKI + ADE VQGAVFDLPEEIAK+LL  +LP GN++ KI+KLP LQDDGP
Sbjct: 568  VCSAAADEVGKIYLTADENVQGAVFDLPEEIAKDLLAMELPAGNTITKISKLPALQDDGP 627

Query: 226  ATDFYGRFXXXXXXXXXXXXXXXXXXXXXSW----------GGRNYDSDDSYGRGGRISD 77
              D YGRF                      W          GGR++ SD+  GR  R  +
Sbjct: 628  PADSYGRFSNDRGSKNRRSRGGGSARGRGGWDSEGEDRFRRGGRSFRSDNDSGRSFRSDN 687

Query: 76   DSYG---W--GGRASRTDSSW 29
            DS+    W  GGR S   SS+
Sbjct: 688  DSWSEDDWSGGGRKSNRSSSF 708


>dbj|BAD21122.1| ATP-dependent RNA helicase [Hordeum vulgare subsp. vulgare]
            gi|326532610|dbj|BAK05234.1| predicted protein [Hordeum
            vulgare subsp. vulgare]
          Length = 764

 Score =  715 bits (1845), Expect = 0.0
 Identities = 372/495 (75%), Positives = 411/495 (83%), Gaps = 10/495 (2%)
 Frame = -1

Query: 1486 AYNIQKNSLSRGVDVVVGTPGRIIDLINDDSLRLGEVQYLVLDEADQMLAVGFEEDVEVI 1307
            +YN Q+N+LSRGVDVVVGTPGR+IDLIN  SL+LGEV+YLVLDEADQMLAVGFEEDVE I
Sbjct: 204  SYNTQQNALSRGVDVVVGTPGRLIDLINGGSLQLGEVRYLVLDEADQMLAVGFEEDVETI 263

Query: 1306 LQKLPPQRQNMLFSATMPGWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAISTTATS 1127
            LQ+LP +RQ+MLFSATMP WVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKL+AI  T TS
Sbjct: 264  LQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAIPLTTTS 323

Query: 1126 KRTILSDLITVYAKGGKTIVFTQTKRDADEVSMALSNSIASEALHGDISQHQRERTLGGF 947
            KRTILSDLITVYAKGGKTIVFT+TKRDADEVS+AL+ SIASEALHGDISQHQRERTL GF
Sbjct: 324  KRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALTTSIASEALHGDISQHQRERTLNGF 383

Query: 946  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGNAILMFTS 767
            RQGKFTVLVATDVA+RGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGK GNAILMFT+
Sbjct: 384  RQGKFTVLVATDVASRGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKAGNAILMFTT 443

Query: 766  SQRRTVKSLERDVGCRFEFVSPPSMQEVLESSAEQVVATLRGVHADSIQYFLPTAQRLTD 587
            +QRRTVKSLERDVGC+FEF+ PP+M+EVL+SSAE V+ATLRGVH +SIQYF+P A+RL+ 
Sbjct: 444  NQRRTVKSLERDVGCKFEFIGPPTMEEVLDSSAEHVIATLRGVHPESIQYFVPAAERLSQ 503

Query: 586  EQGTXXXXXXXXXLSGFSQPPSSRSLISHEQGWVTLQLTREPGYSRGYFSARSVTGFLSD 407
            E G          LSGFSQPPSSRSLISHEQG VTLQLTR+P Y+RG+FS RSVTGFLSD
Sbjct: 504  ELGPTALASALAHLSGFSQPPSSRSLISHEQGSVTLQLTRDPEYARGFFSPRSVTGFLSD 563

Query: 406  VYPDAADEVGKICMIADEKVQGAVFDLPEEIAKELLTKQLPPGNSLVKITKLPILQDDGP 227
            V P AAD VGKI +IADE+VQGAVFDLPEEIAK+LLT +LPPGN+L K+TKLP+LQDDGP
Sbjct: 564  VSPSAADAVGKIYLIADERVQGAVFDLPEEIAKDLLTMELPPGNTLSKVTKLPVLQDDGP 623

Query: 226  ATDFYGRFXXXXXXXXXXXXXXXXXXXXXSWGGRNYDSDDSYGRGGRIS----------D 77
            ATD YGRF                     S G   +DSD+ + RGGR S          D
Sbjct: 624  ATDSYGRFSNSDRGSRNRRGSSRGGMGGGSRGRGGWDSDEGFRRGGRSSSRPDNDIWSDD 683

Query: 76   DSYGWGGRASRTDSS 32
            D  G G R S   SS
Sbjct: 684  DFSGGGARRSNRSSS 698


>ref|XP_003563193.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like
            isoform 2 [Brachypodium distachyon]
          Length = 749

 Score =  715 bits (1845), Expect = 0.0
 Identities = 373/494 (75%), Positives = 412/494 (83%), Gaps = 9/494 (1%)
 Frame = -1

Query: 1486 AYNIQKNSLSRGVDVVVGTPGRIIDLINDDSLRLGEVQYLVLDEADQMLAVGFEEDVEVI 1307
            +YN+Q+N+LSRGVDVVVGTPGR+IDLIN  SL+LGEV+YLVLDEADQMLAVGFEEDVE I
Sbjct: 207  SYNVQQNALSRGVDVVVGTPGRLIDLINGGSLQLGEVRYLVLDEADQMLAVGFEEDVETI 266

Query: 1306 LQKLPPQRQNMLFSATMPGWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAISTTATS 1127
            LQ+LP +RQ+MLFSATMP WVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAI  T TS
Sbjct: 267  LQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAIPLTVTS 326

Query: 1126 KRTILSDLITVYAKGGKTIVFTQTKRDADEVSMALSNSIASEALHGDISQHQRERTLGGF 947
            KRTILSDLITVYAKGGKTIVFT+TKRDADEVS+AL+ SIASEALHGDISQHQRERTL GF
Sbjct: 327  KRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALTASIASEALHGDISQHQRERTLNGF 386

Query: 946  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGNAILMFTS 767
            RQGKFTVLVATDVA+RGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGK GNAILMFT+
Sbjct: 387  RQGKFTVLVATDVASRGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKAGNAILMFTN 446

Query: 766  SQRRTVKSLERDVGCRFEFVSPPSMQEVLESSAEQVVATLRGVHADSIQYFLPTAQRLTD 587
            +QRRTVKSLERDVGCRFEF+ PP+M+EVL+SSAE V+ATLRGVH +SIQYF+P A+RL++
Sbjct: 447  NQRRTVKSLERDVGCRFEFIGPPTMEEVLDSSAEHVIATLRGVHQESIQYFIPAAERLSE 506

Query: 586  EQGTXXXXXXXXXLSGFSQPPSSRSLISHEQGWVTLQLTREPGYSRGYFSARSVTGFLSD 407
            E G          LSGFSQPPSSRSLISHEQG VTLQLTR+P Y+RG+FS RSVTGFLSD
Sbjct: 507  ELGPNALATALAHLSGFSQPPSSRSLISHEQGSVTLQLTRDPAYARGFFSPRSVTGFLSD 566

Query: 406  VYPDAADEVGKICMIADEKVQGAVFDLPEEIAKELLTKQLPPGNSLVKITKLPILQDDGP 227
            V P AADEVGKI +IADE+VQGAVFDLPEEIAK LL+ +LPPGN+L K+TKLP LQDDGP
Sbjct: 567  VSPAAADEVGKIYLIADERVQGAVFDLPEEIAKNLLSMELPPGNTLTKVTKLPALQDDGP 626

Query: 226  ATDFYGRFXXXXXXXXXXXXXXXXXXXXXSWGGRNYDSD-DSYGRGGRI--------SDD 74
            ATD YGRF                       G   +DSD + +GRGGR         SDD
Sbjct: 627  ATDSYGRFSNSDRGSRSRRGSRASGPR----GRGGWDSDGEGFGRGGRSFKPDNDIWSDD 682

Query: 73   SYGWGGRASRTDSS 32
             +  G R S   SS
Sbjct: 683  DFSGGARRSNRSSS 696


>ref|XP_003563192.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like
            isoform 1 [Brachypodium distachyon]
          Length = 769

 Score =  715 bits (1845), Expect = 0.0
 Identities = 373/494 (75%), Positives = 412/494 (83%), Gaps = 9/494 (1%)
 Frame = -1

Query: 1486 AYNIQKNSLSRGVDVVVGTPGRIIDLINDDSLRLGEVQYLVLDEADQMLAVGFEEDVEVI 1307
            +YN+Q+N+LSRGVDVVVGTPGR+IDLIN  SL+LGEV+YLVLDEADQMLAVGFEEDVE I
Sbjct: 207  SYNVQQNALSRGVDVVVGTPGRLIDLINGGSLQLGEVRYLVLDEADQMLAVGFEEDVETI 266

Query: 1306 LQKLPPQRQNMLFSATMPGWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAISTTATS 1127
            LQ+LP +RQ+MLFSATMP WVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAI  T TS
Sbjct: 267  LQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAIPLTVTS 326

Query: 1126 KRTILSDLITVYAKGGKTIVFTQTKRDADEVSMALSNSIASEALHGDISQHQRERTLGGF 947
            KRTILSDLITVYAKGGKTIVFT+TKRDADEVS+AL+ SIASEALHGDISQHQRERTL GF
Sbjct: 327  KRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALTASIASEALHGDISQHQRERTLNGF 386

Query: 946  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGNAILMFTS 767
            RQGKFTVLVATDVA+RGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGK GNAILMFT+
Sbjct: 387  RQGKFTVLVATDVASRGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKAGNAILMFTN 446

Query: 766  SQRRTVKSLERDVGCRFEFVSPPSMQEVLESSAEQVVATLRGVHADSIQYFLPTAQRLTD 587
            +QRRTVKSLERDVGCRFEF+ PP+M+EVL+SSAE V+ATLRGVH +SIQYF+P A+RL++
Sbjct: 447  NQRRTVKSLERDVGCRFEFIGPPTMEEVLDSSAEHVIATLRGVHQESIQYFIPAAERLSE 506

Query: 586  EQGTXXXXXXXXXLSGFSQPPSSRSLISHEQGWVTLQLTREPGYSRGYFSARSVTGFLSD 407
            E G          LSGFSQPPSSRSLISHEQG VTLQLTR+P Y+RG+FS RSVTGFLSD
Sbjct: 507  ELGPNALATALAHLSGFSQPPSSRSLISHEQGSVTLQLTRDPAYARGFFSPRSVTGFLSD 566

Query: 406  VYPDAADEVGKICMIADEKVQGAVFDLPEEIAKELLTKQLPPGNSLVKITKLPILQDDGP 227
            V P AADEVGKI +IADE+VQGAVFDLPEEIAK LL+ +LPPGN+L K+TKLP LQDDGP
Sbjct: 567  VSPAAADEVGKIYLIADERVQGAVFDLPEEIAKNLLSMELPPGNTLTKVTKLPALQDDGP 626

Query: 226  ATDFYGRFXXXXXXXXXXXXXXXXXXXXXSWGGRNYDSD-DSYGRGGRI--------SDD 74
            ATD YGRF                       G   +DSD + +GRGGR         SDD
Sbjct: 627  ATDSYGRFSNSDRGSRSRRGSRASGPR----GRGGWDSDGEGFGRGGRSFKPDNDIWSDD 682

Query: 73   SYGWGGRASRTDSS 32
             +  G R S   SS
Sbjct: 683  DFSGGARRSNRSSS 696


>tpg|DAA52300.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein [Zea
            mays]
          Length = 743

 Score =  714 bits (1844), Expect = 0.0
 Identities = 374/494 (75%), Positives = 408/494 (82%), Gaps = 8/494 (1%)
 Frame = -1

Query: 1486 AYNIQKNSLSRGVDVVVGTPGRIIDLINDDSLRLGEVQYLVLDEADQMLAVGFEEDVEVI 1307
            +YN+Q+N+LSRGVDVVVGTPGRIIDLIN  SL+LGEVQYLVLDEADQMLAVGFEEDVE I
Sbjct: 201  SYNVQQNALSRGVDVVVGTPGRIIDLINGGSLQLGEVQYLVLDEADQMLAVGFEEDVETI 260

Query: 1306 LQKLPPQRQNMLFSATMPGWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAISTTATS 1127
            LQ+LP  RQ+MLFSATMP WVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAI  T TS
Sbjct: 261  LQQLPAGRQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAIPLTTTS 320

Query: 1126 KRTILSDLITVYAKGGKTIVFTQTKRDADEVSMALSNSIASEALHGDISQHQRERTLGGF 947
            KRT+LSDLITVYAKGGKTIVFT+TK+DADEVS+AL+NSIASEALHGDISQHQRERTL GF
Sbjct: 321  KRTVLSDLITVYAKGGKTIVFTRTKKDADEVSLALTNSIASEALHGDISQHQRERTLNGF 380

Query: 946  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGNAILMFTS 767
            RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGK G AILMFTS
Sbjct: 381  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKAGTAILMFTS 440

Query: 766  SQRRTVKSLERDVGCRFEFVSPPSMQEVLESSAEQVVATLRGVHADSIQYFLPTAQRLTD 587
            SQ+RTVKSLERDVGC FEF+SPPS++EVLESSAE V+ATLRGVH +S +YFL  A++LT+
Sbjct: 441  SQKRTVKSLERDVGCNFEFISPPSIEEVLESSAEHVIATLRGVHPESTKYFLGAAEKLTE 500

Query: 586  EQGTXXXXXXXXXLSGFSQPPSSRSLISHEQGWVTLQLTREPGYSRGYFSARSVTGFLSD 407
            E G          LSGFSQPPSSRSLISHEQGWVTLQLTRE G+ RG+FS RSVTGFLSD
Sbjct: 501  ELGPHALASALAHLSGFSQPPSSRSLISHEQGWVTLQLTREQGFGRGFFSPRSVTGFLSD 560

Query: 406  VYPDAADEVGKICMIADEKVQGAVFDLPEEIAKELLTKQLPPGNSLVKITKLPILQDDGP 227
            V   AADEVGKI + ADE VQGAVFDLPEEIAK+LLT +LPPGN+L KI+KLP LQDDGP
Sbjct: 561  VCSAAADEVGKIYLTADENVQGAVFDLPEEIAKDLLTMELPPGNTLTKISKLPALQDDGP 620

Query: 226  ATDFYGRFXXXXXXXXXXXXXXXXXXXXXSWGGRNYDSDDSYGRGGRI--------SDDS 71
            ATD YGRF                       GG + D +D + RGGR         SDD 
Sbjct: 621  ATDSYGRFSNDRGSRNNRRSRGGGASRGR--GGWDTDGEDRFRRGGRSLRSDNDSWSDDD 678

Query: 70   YGWGGRASRTDSSW 29
            +  GGR S   SS+
Sbjct: 679  WSGGGRKSNRSSSF 692


>ref|NP_001130659.1| uncharacterized protein LOC100191761 [Zea mays]
            gi|194689766|gb|ACF78967.1| unknown [Zea mays]
          Length = 598

 Score =  714 bits (1844), Expect = 0.0
 Identities = 374/494 (75%), Positives = 408/494 (82%), Gaps = 8/494 (1%)
 Frame = -1

Query: 1486 AYNIQKNSLSRGVDVVVGTPGRIIDLINDDSLRLGEVQYLVLDEADQMLAVGFEEDVEVI 1307
            +YN+Q+N+LSRGVDVVVGTPGRIIDLIN  SL+LGEVQYLVLDEADQMLAVGFEEDVE I
Sbjct: 56   SYNVQQNALSRGVDVVVGTPGRIIDLINGGSLQLGEVQYLVLDEADQMLAVGFEEDVETI 115

Query: 1306 LQKLPPQRQNMLFSATMPGWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAISTTATS 1127
            LQ+LP  RQ+MLFSATMP WVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAI  T TS
Sbjct: 116  LQQLPAGRQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAIPLTTTS 175

Query: 1126 KRTILSDLITVYAKGGKTIVFTQTKRDADEVSMALSNSIASEALHGDISQHQRERTLGGF 947
            KRT+LSDLITVYAKGGKTIVFT+TK+DADEVS+AL+NSIASEALHGDISQHQRERTL GF
Sbjct: 176  KRTVLSDLITVYAKGGKTIVFTRTKKDADEVSLALTNSIASEALHGDISQHQRERTLNGF 235

Query: 946  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGNAILMFTS 767
            RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGK G AILMFTS
Sbjct: 236  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKAGTAILMFTS 295

Query: 766  SQRRTVKSLERDVGCRFEFVSPPSMQEVLESSAEQVVATLRGVHADSIQYFLPTAQRLTD 587
            SQ+RTVKSLERDVGC FEF+SPPS++EVLESSAE V+ATLRGVH +S +YFL  A++LT+
Sbjct: 296  SQKRTVKSLERDVGCNFEFISPPSIEEVLESSAEHVIATLRGVHPESTKYFLGAAEKLTE 355

Query: 586  EQGTXXXXXXXXXLSGFSQPPSSRSLISHEQGWVTLQLTREPGYSRGYFSARSVTGFLSD 407
            E G          LSGFSQPPSSRSLISHEQGWVTLQLTRE G+ RG+FS RSVTGFLSD
Sbjct: 356  ELGPHALASALAHLSGFSQPPSSRSLISHEQGWVTLQLTREQGFGRGFFSPRSVTGFLSD 415

Query: 406  VYPDAADEVGKICMIADEKVQGAVFDLPEEIAKELLTKQLPPGNSLVKITKLPILQDDGP 227
            V   AADEVGKI + ADE VQGAVFDLPEEIAK+LLT +LPPGN+L KI+KLP LQDDGP
Sbjct: 416  VCSAAADEVGKIYLTADENVQGAVFDLPEEIAKDLLTMELPPGNTLTKISKLPALQDDGP 475

Query: 226  ATDFYGRFXXXXXXXXXXXXXXXXXXXXXSWGGRNYDSDDSYGRGGRI--------SDDS 71
            ATD YGRF                       GG + D +D + RGGR         SDD 
Sbjct: 476  ATDSYGRFSNDRGSRNNRRSRGGGASRGR--GGWDTDGEDRFRRGGRSLRSDNDSWSDDD 533

Query: 70   YGWGGRASRTDSSW 29
            +  GGR S   SS+
Sbjct: 534  WSGGGRKSNRSSSF 547


>gb|AFW67097.1| putative DEAD-box ATP-dependent RNA helicase family protein [Zea
            mays]
          Length = 745

 Score =  714 bits (1843), Expect = 0.0
 Identities = 375/493 (76%), Positives = 408/493 (82%), Gaps = 8/493 (1%)
 Frame = -1

Query: 1486 AYNIQKNSLSRGVDVVVGTPGRIIDLINDDSLRLGEVQYLVLDEADQMLAVGFEEDVEVI 1307
            +YN+Q+N+LSRGVDVVVGTPGRIIDLIN  SL+LGEVQYLVLDEADQMLAVGFEEDVE I
Sbjct: 201  SYNVQQNALSRGVDVVVGTPGRIIDLINGGSLQLGEVQYLVLDEADQMLAVGFEEDVETI 260

Query: 1306 LQKLPPQRQNMLFSATMPGWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAISTTATS 1127
            LQ+LP  RQ+MLFSATMP WVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKL+AI  TATS
Sbjct: 261  LQQLPADRQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLHAIPLTATS 320

Query: 1126 KRTILSDLITVYAKGGKTIVFTQTKRDADEVSMALSNSIASEALHGDISQHQRERTLGGF 947
            KRTILSDLITVYAKGGKTIVFT+TK+DADEVS+AL+ SIASEALHGDISQHQRERTL GF
Sbjct: 321  KRTILSDLITVYAKGGKTIVFTRTKKDADEVSLALTTSIASEALHGDISQHQRERTLNGF 380

Query: 946  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGNAILMFTS 767
            RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGK G AILMFTS
Sbjct: 381  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKAGTAILMFTS 440

Query: 766  SQRRTVKSLERDVGCRFEFVSPPSMQEVLESSAEQVVATLRGVHADSIQYFLPTAQRLTD 587
            SQ+RTV SLERDVGC+FEF+SPPS++EVLESSAE V+ATLRGVH +S QYFL  A++LT+
Sbjct: 441  SQKRTVMSLERDVGCKFEFISPPSIEEVLESSAEHVIATLRGVHPESTQYFLGAAEKLTE 500

Query: 586  EQGTXXXXXXXXXLSGFSQPPSSRSLISHEQGWVTLQLTREPGYSRGYFSARSVTGFLSD 407
            E G          LSGFSQPPSSRSLIS+EQGWVTLQLTREPGY RG+FS RSVTGFLSD
Sbjct: 501  ELGPHALASALAHLSGFSQPPSSRSLISYEQGWVTLQLTREPGYGRGFFSPRSVTGFLSD 560

Query: 406  VYPDAADEVGKICMIADEKVQGAVFDLPEEIAKELLTKQLPPGNSLVKITKLPILQDDGP 227
            V   AADEVGKI + ADE VQGAVFDLPEEIAK+LLT ++PPGN+L KI+KLP LQDD P
Sbjct: 561  VCSAAADEVGKIYITADENVQGAVFDLPEEIAKDLLTMEVPPGNTLTKISKLPALQDDSP 620

Query: 226  ATDFYGRFXXXXXXXXXXXXXXXXXXXXXSWGGRNYDSDDSYGRGGRI--------SDDS 71
            ATD YGRF                       GG + DS+D Y RGGR         SDD 
Sbjct: 621  ATDSYGRFSNDRGSRNRRSRGGGASRGR---GGWDTDSEDRYRRGGRSLRSDNDSWSDDD 677

Query: 70   YGWGGRASRTDSS 32
            +  GGR S   SS
Sbjct: 678  WSGGGRKSNRSSS 690


>gb|EMS52116.1| DEAD-box ATP-dependent RNA helicase 3, chloroplastic [Triticum
            urartu]
          Length = 884

 Score =  713 bits (1840), Expect = 0.0
 Identities = 371/495 (74%), Positives = 411/495 (83%), Gaps = 10/495 (2%)
 Frame = -1

Query: 1486 AYNIQKNSLSRGVDVVVGTPGRIIDLINDDSLRLGEVQYLVLDEADQMLAVGFEEDVEVI 1307
            +YN Q+N+LSRGVDVVVGTPGR+IDLIN  SL+LGEV+YLVLDEADQMLAVGFEEDVE I
Sbjct: 214  SYNTQQNALSRGVDVVVGTPGRLIDLINGGSLQLGEVRYLVLDEADQMLAVGFEEDVETI 273

Query: 1306 LQKLPPQRQNMLFSATMPGWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAISTTATS 1127
            LQ+LP +RQ+MLFSATMP WVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKL+AI  T TS
Sbjct: 274  LQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAIPLTTTS 333

Query: 1126 KRTILSDLITVYAKGGKTIVFTQTKRDADEVSMALSNSIASEALHGDISQHQRERTLGGF 947
            KRTILSDLITVYAKGGKTIVFT+TKRDADEVS+AL+ SIASEALHGDISQHQRERTL GF
Sbjct: 334  KRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALTTSIASEALHGDISQHQRERTLNGF 393

Query: 946  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGNAILMFTS 767
            RQGKFTVLVATDVA+RGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGK GNAILMFT+
Sbjct: 394  RQGKFTVLVATDVASRGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKAGNAILMFTT 453

Query: 766  SQRRTVKSLERDVGCRFEFVSPPSMQEVLESSAEQVVATLRGVHADSIQYFLPTAQRLTD 587
            +QRRTVKSLERDVGC+FEF+ PP+M+EVL+SSAE V+ATLRGVH +SIQYF+P A+RL+ 
Sbjct: 454  NQRRTVKSLERDVGCKFEFIGPPTMEEVLDSSAEHVIATLRGVHPESIQYFVPAAERLSQ 513

Query: 586  EQGTXXXXXXXXXLSGFSQPPSSRSLISHEQGWVTLQLTREPGYSRGYFSARSVTGFLSD 407
            E G          LSGFSQPPSSRSLISHEQG VTLQLTR+P Y+RG+FS RSVTGFLSD
Sbjct: 514  ELGPTALASALAHLSGFSQPPSSRSLISHEQGSVTLQLTRDPAYARGFFSPRSVTGFLSD 573

Query: 406  VYPDAADEVGKICMIADEKVQGAVFDLPEEIAKELLTKQLPPGNSLVKITKLPILQDDGP 227
            V P AAD VGKI +IADE+VQGAVFDLPEEIAK+LLT +LP GN+L K+TKLP+LQDDGP
Sbjct: 574  VSPSAADAVGKIYLIADERVQGAVFDLPEEIAKDLLTMELPEGNTLSKVTKLPVLQDDGP 633

Query: 226  ATDFYGRFXXXXXXXXXXXXXXXXXXXXXSWGGRNYDSDDSYGRGGRIS----------D 77
            ATD YGRF                     S G  ++DSD+ + RGGR S          D
Sbjct: 634  ATDSYGRFSNSDRGSRNRRGSSRGGMGGGSRGRGSWDSDEGFRRGGRSSSRPDNDIWSDD 693

Query: 76   DSYGWGGRASRTDSS 32
            D  G G R S   SS
Sbjct: 694  DFSGGGARRSNRSSS 708


>ref|XP_006480316.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like
            isoform X2 [Citrus sinensis]
          Length = 767

 Score =  711 bits (1836), Expect = 0.0
 Identities = 375/510 (73%), Positives = 423/510 (82%), Gaps = 21/510 (4%)
 Frame = -1

Query: 1486 AYNIQKNSLSRGVDVVVGTPGRIIDLINDDSLRLGEVQYLVLDEADQMLAVGFEEDVEVI 1307
            +YN Q+N+LSRGVDVVVGTPGRIIDLIN+ SL+LGEV+YLVLDEADQMLAVGFEEDVE+I
Sbjct: 238  SYNTQQNALSRGVDVVVGTPGRIIDLINNSSLKLGEVEYLVLDEADQMLAVGFEEDVELI 297

Query: 1306 LQKLPPQRQNMLFSATMPGWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAISTTATS 1127
            L+ LPP+RQ+MLFSATMP WVKKLSR+YL+NPL IDLVG+QDEKLAEGIKLYAISTTATS
Sbjct: 298  LENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATS 357

Query: 1126 KRTILSDLITVYAKGGKTIVFTQTKRDADEVSMALSNSIASEALHGDISQHQRERTLGGF 947
            KRTILSDLITVYAKGGKTIVFTQTKRDADEVS+AL++ IASEALHGDISQHQRERTL GF
Sbjct: 358  KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSIIASEALHGDISQHQRERTLNGF 417

Query: 946  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGNAILMFTS 767
            RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEG AILMFTS
Sbjct: 418  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTS 477

Query: 766  SQRRTVKSLERDVGCRFEFVSPPSMQEVLESSAEQVVATLRGVHADSIQYFLPTAQRLTD 587
            SQRRTV+SLERDVGC+FEFVSPP +++VLESSAEQVVATL GVH +S+++F PTAQRL +
Sbjct: 478  SQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQVVATLNGVHPESVEFFTPTAQRLIE 537

Query: 586  EQGTXXXXXXXXXLSGFSQPPSSRSLISHEQGWVTLQLTREPGYSRGYFSARSVTGFLSD 407
            E+GT         LSGFS+PPSSRSLI+HEQGWVTLQLTR+  +SRG+ SARSV GFLSD
Sbjct: 538  EKGTDALAAALAQLSGFSRPPSSRSLINHEQGWVTLQLTRDSAFSRGFMSARSVMGFLSD 597

Query: 406  VYPDAADEVGKICMIADEKVQGAVFDLPEEIAKELLTKQLPPGNSLVKITKLPILQDDGP 227
            VYP AADE+GKI +IAD++VQGAVFDLPEEIAKELL KQ+PPGN++ KITKLP+LQDDGP
Sbjct: 598  VYPTAADEIGKIHIIADDRVQGAVFDLPEEIAKELLNKQIPPGNTISKITKLPVLQDDGP 657

Query: 226  ATDFYGRFXXXXXXXXXXXXXXXXXXXXXSW--GGRNYDSDDSYG----RGGR------- 86
            ++D YGRF                           R++ SDD  G    RGGR       
Sbjct: 658  SSDNYGRFSSGDRFSRGGGSRFSRGGARGGGFRSSRSWGSDDEDGFSSSRGGRSFRSGNN 717

Query: 85   -------ISDDSYGWGG-RASRTDSSWSRN 20
                    SDD +  GG R+SR+ S  SR+
Sbjct: 718  QGSRFSTSSDDDWLIGGSRSSRSSSRDSRS 747


>ref|XP_006480317.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like
            isoform X3 [Citrus sinensis]
          Length = 766

 Score =  711 bits (1835), Expect = 0.0
 Identities = 368/493 (74%), Positives = 415/493 (84%), Gaps = 7/493 (1%)
 Frame = -1

Query: 1486 AYNIQKNSLSRGVDVVVGTPGRIIDLINDDSLRLGEVQYLVLDEADQMLAVGFEEDVEVI 1307
            +YN Q+N+LSRGVDVVVGTPGRIIDLIN+ SL+LGEV+YLVLDEADQMLAVGFEEDVE+I
Sbjct: 238  SYNTQQNALSRGVDVVVGTPGRIIDLINNSSLKLGEVEYLVLDEADQMLAVGFEEDVELI 297

Query: 1306 LQKLPPQRQNMLFSATMPGWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAISTTATS 1127
            L+ LPP+RQ+MLFSATMP WVKKLSR+YL+NPL IDLVG+QDEKLAEGIKLYAISTTATS
Sbjct: 298  LENLPPKRQSMLFSATMPSWVKKLSRKYLDNPLNIDLVGNQDEKLAEGIKLYAISTTATS 357

Query: 1126 KRTILSDLITVYAKGGKTIVFTQTKRDADEVSMALSNSIASEALHGDISQHQRERTLGGF 947
            KRTILSDLITVYAKGGKTIVFTQTKRDADEVS+AL++ IASEALHGDISQHQRERTL GF
Sbjct: 358  KRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTSIIASEALHGDISQHQRERTLNGF 417

Query: 946  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGNAILMFTS 767
            RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEG AILMFTS
Sbjct: 418  RQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTS 477

Query: 766  SQRRTVKSLERDVGCRFEFVSPPSMQEVLESSAEQVVATLRGVHADSIQYFLPTAQRLTD 587
            SQRRTV+SLERDVGC+FEFVSPP +++VLESSAEQVVATL GVH +S+++F PTAQRL +
Sbjct: 478  SQRRTVRSLERDVGCKFEFVSPPVVEDVLESSAEQVVATLNGVHPESVEFFTPTAQRLIE 537

Query: 586  EQGTXXXXXXXXXLSGFSQPPSSRSLISHEQGWVTLQLTREPGYSRGYFSARSVTGFLSD 407
            E+GT         LSGFS+PPSSRSLI+HEQGWVTLQLTR+  +SRG+ SARSV GFLSD
Sbjct: 538  EKGTDALAAALAQLSGFSRPPSSRSLINHEQGWVTLQLTRDSAFSRGFMSARSVMGFLSD 597

Query: 406  VYPDAADEVGKICMIADEKVQGAVFDLPEEIAKELLTKQLPPGNSLVKITKLPILQDDGP 227
            VYP AADE+GKI +IAD++VQGAVFDLPEEIAKELL KQ+PPGN++ KITKLP+LQDDGP
Sbjct: 598  VYPTAADEIGKIHIIADDRVQGAVFDLPEEIAKELLNKQIPPGNTISKITKLPVLQDDGP 657

Query: 226  ATDFYGRFXXXXXXXXXXXXXXXXXXXXXSW--GGRNYDSDDSYG----RGGRISDDSYG 65
            ++D YGRF                           R++ SDD  G    RGGR       
Sbjct: 658  SSDNYGRFSSGDRFSRGGGSRFSRGGARGGGFRSSRSWGSDDEDGFSSSRGGRSFRSGNN 717

Query: 64   WGGR-ASRTDSSW 29
             G R ++ +D  W
Sbjct: 718  QGSRFSTSSDDDW 730