BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00054924
         (371 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527661.1| pentatricopeptide repeat-containing protein,...    62   8e-08
gb|ESW30266.1| hypothetical protein PHAVU_002G138600g [Phaseolus...    61   1e-07
gb|EOY25154.1| Tetratricopeptide repeat-like superfamily protein...    59   7e-07
ref|XP_006572968.1| PREDICTED: pentatricopeptide repeat-containi...    55   7e-06

>ref|XP_002527661.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223532966|gb|EEF34732.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 766

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 26/74 (35%), Positives = 46/74 (62%)
 Frame = +3

Query: 102 RAGLFPLVSVVQRTLDWTTVREIRFAEAAGAYGFPHAVEAFSMLMGVFSSAGMQREIRLL 281
           + GLFP V  V +TL+W       F +A   +GF H++ AF +++ V +SAG+Q E+++ 
Sbjct: 84  KRGLFPFVLTVFKTLNWKLATHTNFFKAVSFHGFSHSIYAFKIIIHVLASAGLQMEVQIF 143

Query: 282 LAGVLSFVRNVDCD 323
           L  ++S+ + V+ D
Sbjct: 144 LRDIISYYKEVNLD 157


>gb|ESW30266.1| hypothetical protein PHAVU_002G138600g [Phaseolus vulgaris]
          Length = 831

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 35/103 (33%), Positives = 53/103 (51%), Gaps = 2/103 (1%)
 Frame = +3

Query: 21  PPNYSSDDVDRDATDKLPDAKLRPGVP--RAGLFPLVSVVQRTLDWTTVREIRFAEAAGA 194
           P +Y+S  +DR            P VP  R   FPLVS V ++L W   RE+RF     +
Sbjct: 42  PKSYASFVIDRSV----------PHVPVTRREYFPLVSRVLKSLSWRVAREVRFGSWVES 91

Query: 195 YGFPHAVEAFSMLMGVFSSAGMQREIRLLLAGVLSFVRNVDCD 323
           +GF H++  F +++  F+ AGM+ E+  LL  V+ F    + D
Sbjct: 92  HGFSHSINCFRIIVHAFALAGMRLEVFALLRDVVGFCNEANYD 134


>gb|EOY25154.1| Tetratricopeptide repeat-like superfamily protein, putative
           [Theobroma cacao]
          Length = 746

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 29/71 (40%), Positives = 43/71 (60%)
 Frame = +3

Query: 111 LFPLVSVVQRTLDWTTVREIRFAEAAGAYGFPHAVEAFSMLMGVFSSAGMQREIRLLLAG 290
           L P V  V ++L+W   REIRF  AA  YGF H++ AF +++ +F+ AGMQ E   LL  
Sbjct: 77  LTPFVVRVFKSLNWDIAREIRFNMAAKMYGFDHSMYAFRIIIHIFAMAGMQMEAHALLRD 136

Query: 291 VLSFVRNVDCD 323
           ++ + + V  D
Sbjct: 137 IVCYYKEVKTD 147


>ref|XP_006572968.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like isoform X1 [Glycine max]
           gi|571433663|ref|XP_006572969.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like isoform X2 [Glycine max]
           gi|571433665|ref|XP_006572970.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like isoform X3 [Glycine max]
           gi|571433667|ref|XP_006572971.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like isoform X4 [Glycine max]
          Length = 734

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
 Frame = +3

Query: 90  PGVP--RAGLFPLVSVVQRTLDWTTVREIRFAEAAGAYGFPHAVEAFSMLMGVFSSAGMQ 263
           P VP  R+ LFPLVS V ++L W+  R+ +F      +GF H++  F +++  F+ AGM+
Sbjct: 56  PHVPATRSELFPLVSRVFKSLSWSVARKKKFGNWVECHGFSHSISCFRIIVHAFALAGMR 115

Query: 264 REIRLLLAGVLSFVRNVDCD 323
            E+  LL  ++ F      D
Sbjct: 116 LEVWALLRDIVGFCNEAKYD 135