BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00054891
         (359 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006847961.1| hypothetical protein AMTR_s00029p00147240 [A...    67   3e-09
ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containi...    65   1e-08
ref|XP_006486600.1| PREDICTED: pentatricopeptide repeat-containi...    63   4e-08
ref|XP_006422433.1| hypothetical protein CICLE_v10027787mg [Citr...    63   4e-08
ref|XP_002884041.1| binding protein [Arabidopsis lyrata subsp. l...    63   4e-08
ref|XP_002527150.1| pentatricopeptide repeat-containing protein,...    62   6e-08
ref|NP_179305.2| pentatricopeptide repeat-containing protein [Ar...    62   6e-08
ref|XP_006409347.1| hypothetical protein EUTSA_v10022542mg [Eutr...    60   2e-07
ref|XP_006296960.1| hypothetical protein CARUB_v10012952mg, part...    60   3e-07
gb|EOX97443.1| Pentatricopeptide repeat (PPR) superfamily protei...    60   4e-07
gb|EOX97442.1| Pentatricopeptide repeat (PPR) superfamily protei...    60   4e-07
gb|EMJ01512.1| hypothetical protein PRUPE_ppa001249mg [Prunus pe...    59   5e-07
ref|XP_006384843.1| hypothetical protein POPTR_0004s21560g [Popu...    57   2e-06
gb|ESW31227.1| hypothetical protein PHAVU_002G220400g [Phaseolus...    56   4e-06
ref|XP_004154721.1| PREDICTED: pentatricopeptide repeat-containi...    55   1e-05
ref|XP_004144886.1| PREDICTED: pentatricopeptide repeat-containi...    55   1e-05
ref|XP_003530995.1| PREDICTED: pentatricopeptide repeat-containi...    55   1e-05

>ref|XP_006847961.1| hypothetical protein AMTR_s00029p00147240 [Amborella trichopoda]
           gi|548851266|gb|ERN09542.1| hypothetical protein
           AMTR_s00029p00147240 [Amborella trichopoda]
          Length = 889

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 28/41 (68%), Positives = 36/41 (87%)
 Frame = -3

Query: 309 KKDVSSKNEWHNLLHKDDGSGIALKVLKRVQKGWGQGSITT 187
           K+D S  ++W +LLH+DDGSGIA+KVLKR+QKGWGQG+I T
Sbjct: 833 KEDGSGGSDWQSLLHRDDGSGIAMKVLKRIQKGWGQGAIPT 873


>ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
           [Vitis vinifera] gi|297744485|emb|CBI37747.3| unnamed
           protein product [Vitis vinifera]
          Length = 878

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 26/43 (60%), Positives = 37/43 (86%)
 Frame = -3

Query: 315 KQKKDVSSKNEWHNLLHKDDGSGIALKVLKRVQKGWGQGSITT 187
           +QK++  S ++W  ++H+DDGSG+ALK LKRVQKGWGQGSI++
Sbjct: 820 RQKRNKFSGSDWQTIIHRDDGSGLALKALKRVQKGWGQGSISS 862


>ref|XP_006486600.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140-like
            [Citrus sinensis] gi|568866524|ref|XP_006486605.1|
            PREDICTED: pentatricopeptide repeat-containing protein
            At2g17140-like [Citrus sinensis]
          Length = 889

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 30/69 (43%), Positives = 47/69 (68%), Gaps = 3/69 (4%)
 Frame = -3

Query: 348  HMLGESNLIIQKQKKDVSSKNEWHNLLHKDDGSGIALKVLKRVQKGWGQGSITTP*MQD- 172
            H + ++   + ++K++ +  + W ++LH++DGSGIALK LKRVQKGWGQGSI++   Q  
Sbjct: 808  HKISQNAGELVRRKQNKNGGSVWQDILHREDGSGIALKTLKRVQKGWGQGSISSLQAQKY 867

Query: 171  --IDSWMSG 151
              +D W  G
Sbjct: 868  DLLDYWEPG 876


>ref|XP_006422433.1| hypothetical protein CICLE_v10027787mg [Citrus clementina]
            gi|557524367|gb|ESR35673.1| hypothetical protein
            CICLE_v10027787mg [Citrus clementina]
          Length = 889

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 30/69 (43%), Positives = 47/69 (68%), Gaps = 3/69 (4%)
 Frame = -3

Query: 348  HMLGESNLIIQKQKKDVSSKNEWHNLLHKDDGSGIALKVLKRVQKGWGQGSITTP*MQD- 172
            H + ++   + ++K++ +  + W ++LH++DGSGIALK LKRVQKGWGQGSI++   Q  
Sbjct: 808  HKISQNAGELVRRKQNKNGGSVWQDILHREDGSGIALKTLKRVQKGWGQGSISSLQAQKY 867

Query: 171  --IDSWMSG 151
              +D W  G
Sbjct: 868  DLLDYWEPG 876


>ref|XP_002884041.1| binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297329881|gb|EFH60300.1| binding protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 874

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 29/52 (55%), Positives = 38/52 (73%)
 Frame = -3

Query: 321 IQKQKKDVSSKNEWHNLLHKDDGSGIALKVLKRVQKGWGQGSITTP*MQDID 166
           I ++K +  S N W N+LH+DDGSGIALK L RV+KGWGQG I++   Q +D
Sbjct: 814 IHQKKHNKYSGNNWQNILHRDDGSGIALKSLSRVKKGWGQGDISSFQPQRVD 865


>ref|XP_002527150.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223533489|gb|EEF35232.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 874

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 28/46 (60%), Positives = 37/46 (80%)
 Frame = -3

Query: 324 IIQKQKKDVSSKNEWHNLLHKDDGSGIALKVLKRVQKGWGQGSITT 187
           I++ + KD    N+W  ++H+DDGSGIALK LKRVQKGWGQGSI++
Sbjct: 815 ILRNKNKDAG--NDWPIIVHRDDGSGIALKALKRVQKGWGQGSISS 858


>ref|NP_179305.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|122223754|sp|Q0WPZ6.1|PP158_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g17140 gi|110737729|dbj|BAF00803.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|330251496|gb|AEC06590.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 874

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 28/57 (49%), Positives = 40/57 (70%), Gaps = 3/57 (5%)
 Frame = -3

Query: 321 IQKQKKDVSSKNEWHNLLHKDDGSGIALKVLKRVQKGWGQGSITT---P*MQDIDSW 160
           I ++K + +  N W N+LH+DDGSGIAL+ L RV+KGWGQG I++   P +  +D W
Sbjct: 814 IHQKKHNKNGGNNWQNILHRDDGSGIALRSLSRVKKGWGQGDISSFQPPRVDYLDYW 870


>ref|XP_006409347.1| hypothetical protein EUTSA_v10022542mg [Eutrema salsugineum]
           gi|557110509|gb|ESQ50800.1| hypothetical protein
           EUTSA_v10022542mg [Eutrema salsugineum]
          Length = 877

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 28/57 (49%), Positives = 38/57 (66%), Gaps = 3/57 (5%)
 Frame = -3

Query: 321 IQKQKKDVSSKNEWHNLLHKDDGSGIALKVLKRVQKGWGQGSITT---P*MQDIDSW 160
           + + K +    N W N+LH+DDGSGIALK L RV+KGWGQG I++   P +  +D W
Sbjct: 817 LHQTKDNKYGGNNWQNILHRDDGSGIALKSLTRVKKGWGQGDISSFQPPRVDYLDYW 873


>ref|XP_006296960.1| hypothetical protein CARUB_v10012952mg, partial [Capsella rubella]
           gi|482565669|gb|EOA29858.1| hypothetical protein
           CARUB_v10012952mg, partial [Capsella rubella]
          Length = 881

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 25/45 (55%), Positives = 33/45 (73%)
 Frame = -3

Query: 321 IQKQKKDVSSKNEWHNLLHKDDGSGIALKVLKRVQKGWGQGSITT 187
           + ++K      N W N+LH+DDGSGIALK L RV+KGWGQG I++
Sbjct: 821 LHQKKHTRHGGNNWQNILHRDDGSGIALKTLSRVKKGWGQGDISS 865


>gb|EOX97443.1| Pentatricopeptide repeat (PPR) superfamily protein isoform 2
           [Theobroma cacao]
          Length = 632

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 24/33 (72%), Positives = 30/33 (90%)
 Frame = -3

Query: 288 NEWHNLLHKDDGSGIALKVLKRVQKGWGQGSIT 190
           ++W  ++H+DDGSGIALK LKRVQKGWGQGSI+
Sbjct: 583 DDWQTIVHRDDGSGIALKALKRVQKGWGQGSIS 615


>gb|EOX97442.1| Pentatricopeptide repeat (PPR) superfamily protein isoform 1
           [Theobroma cacao]
          Length = 872

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 24/33 (72%), Positives = 30/33 (90%)
 Frame = -3

Query: 288 NEWHNLLHKDDGSGIALKVLKRVQKGWGQGSIT 190
           ++W  ++H+DDGSGIALK LKRVQKGWGQGSI+
Sbjct: 823 DDWQTIVHRDDGSGIALKALKRVQKGWGQGSIS 855


>gb|EMJ01512.1| hypothetical protein PRUPE_ppa001249mg [Prunus persica]
          Length = 872

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 23/34 (67%), Positives = 31/34 (91%)
 Frame = -3

Query: 288 NEWHNLLHKDDGSGIALKVLKRVQKGWGQGSITT 187
           ++W  ++H+DDGSGIALK LKRVQKGWG+GS+T+
Sbjct: 828 SDWQTIVHRDDGSGIALKTLKRVQKGWGRGSLTS 861


>ref|XP_006384843.1| hypothetical protein POPTR_0004s21560g [Populus trichocarpa]
           gi|550341611|gb|ERP62640.1| hypothetical protein
           POPTR_0004s21560g [Populus trichocarpa]
          Length = 874

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 25/41 (60%), Positives = 33/41 (80%)
 Frame = -3

Query: 309 KKDVSSKNEWHNLLHKDDGSGIALKVLKRVQKGWGQGSITT 187
           KK+   ++EW  +LH+DDGSGIALK LKRVQ+G  QGSI++
Sbjct: 818 KKNKDGESEWQTILHRDDGSGIALKALKRVQRGLDQGSISS 858


>gb|ESW31227.1| hypothetical protein PHAVU_002G220400g [Phaseolus vulgaris]
          Length = 886

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 23/34 (67%), Positives = 31/34 (91%)
 Frame = -3

Query: 288 NEWHNLLHKDDGSGIALKVLKRVQKGWGQGSITT 187
           ++W +++++D GSGIALK LKRVQKGWGQGSIT+
Sbjct: 837 SDWKDIVNRDGGSGIALKTLKRVQKGWGQGSITS 870


>ref|XP_004154721.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Cucumis sativus]
          Length = 875

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 22/37 (59%), Positives = 30/37 (81%)
 Frame = -3

Query: 297 SSKNEWHNLLHKDDGSGIALKVLKRVQKGWGQGSITT 187
           + +++W  ++H++DGSGIA K LKRV KGWGQGSI T
Sbjct: 823 NDESDWQKIVHRNDGSGIAQKTLKRVLKGWGQGSIAT 859


>ref|XP_004144886.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Cucumis sativus]
           gi|449472527|ref|XP_004153621.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g17140-like [Cucumis sativus]
          Length = 875

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 22/37 (59%), Positives = 30/37 (81%)
 Frame = -3

Query: 297 SSKNEWHNLLHKDDGSGIALKVLKRVQKGWGQGSITT 187
           + +++W  ++H++DGSGIA K LKRV KGWGQGSI T
Sbjct: 823 NDESDWQKIVHRNDGSGIAQKTLKRVLKGWGQGSIAT 859


>ref|XP_003530995.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like isoform X1 [Glycine max]
          Length = 875

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 22/34 (64%), Positives = 31/34 (91%)
 Frame = -3

Query: 288 NEWHNLLHKDDGSGIALKVLKRVQKGWGQGSITT 187
           ++W +++++D GSGIALK LKRVQKGWGQGSI++
Sbjct: 826 SDWQDIINRDAGSGIALKTLKRVQKGWGQGSISS 859