BLASTX nr result
ID: Zingiber23_contig00054828
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00054828
(306 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004288735.1| PREDICTED: polygalacturonase-like [Fragaria ... 74 3e-11
ref|NP_001234533.1| abscission polygalacturonase precursor [Sola... 73 4e-11
ref|XP_006357140.1| PREDICTED: polygalacturonase-like [Solanum t... 72 8e-11
gb|ESW06331.1| hypothetical protein PHAVU_010G039000g [Phaseolus... 72 1e-10
ref|XP_006372690.1| hypothetical protein POPTR_0017s03910g [Popu... 71 2e-10
ref|XP_004969212.1| PREDICTED: polygalacturonase-like [Setaria i... 71 2e-10
ref|XP_004287176.1| PREDICTED: polygalacturonase-like [Fragaria ... 70 3e-10
gb|AAC28902.2| polygalacturonase 3, partial [Solanum lycopersicum] 70 3e-10
gb|AFO53698.1| fruit ripening and abscission polygalacturonase [... 70 4e-10
ref|XP_006378843.1| hypothetical protein POPTR_0010s25450g [Popu... 69 5e-10
gb|EMS56561.1| Exopolygalacturonase [Triticum urartu] 69 5e-10
ref|XP_002529095.1| Polygalacturonase precursor, putative [Ricin... 69 5e-10
gb|EMT30554.1| Polygalacturonase [Aegilops tauschii] 69 6e-10
gb|EMT26510.1| Polygalacturonase [Aegilops tauschii] 69 6e-10
gb|AAC28903.1| polygalacturonase 1 [Solanum lycopersicum] 69 8e-10
ref|XP_002331662.1| predicted protein [Populus trichocarpa] 68 1e-09
ref|XP_002331659.1| predicted protein [Populus trichocarpa] gi|5... 68 1e-09
dbj|BAG95892.1| unnamed protein product [Oryza sativa Japonica G... 68 1e-09
ref|XP_006493140.1| PREDICTED: polygalacturonase-like [Citrus si... 68 1e-09
ref|XP_002331630.1| predicted protein [Populus trichocarpa] 68 1e-09
>ref|XP_004288735.1| PREDICTED: polygalacturonase-like [Fragaria vesca subsp. vesca]
Length = 394
Score = 73.6 bits (179), Expect = 3e-11
Identities = 39/84 (46%), Positives = 56/84 (66%)
Frame = -1
Query: 252 VILLFLTIISATHASPGEVHDIVDYGARPDRPRFDSSDSLLRAWAAACESTGSPTVSVPA 73
V L FL ++HA+ G +++V YGAR D + DS+ + LRAW+AAC S+ S TV VP
Sbjct: 9 VALAFL--FESSHAAGGATYNVVSYGARGDG-KTDSTKAFLRAWSAACFSSRSATVYVPR 65
Query: 72 GDFLVHRAPFAGPCKSSKITVRIG 1
G FL+ F+GPC+SS+I ++G
Sbjct: 66 GTFLLKPVVFSGPCRSSRIVFQMG 89
>ref|NP_001234533.1| abscission polygalacturonase precursor [Solanum lycopersicum]
gi|1575705|gb|AAB09575.1| abscission polygalacturonase
[Solanum lycopersicum] gi|2459813|gb|AAC28904.1|
polygalacturonase 2 [Solanum lycopersicum]
Length = 392
Score = 72.8 bits (177), Expect = 4e-11
Identities = 37/85 (43%), Positives = 56/85 (65%), Gaps = 1/85 (1%)
Frame = -1
Query: 255 PVILLFLTIISATHASPGEVHDIVDYGARPDRPRFDSSDSLLRAWAAACESTGSPTVSVP 76
P+ + FL +I+++ A+ ++D+ +YGA+ D + DSS + L AWAAAC S T++VP
Sbjct: 3 PLAIFFLFLINSSLAANTNIYDVQNYGAKSDG-KTDSSKAFLNAWAAACASNTPSTINVP 61
Query: 75 AGDFLVHRAPFAG-PCKSSKITVRI 4
AG +L+H A F G CKS IT+ I
Sbjct: 62 AGKYLIHNANFNGQTCKSKAITMHI 86
>ref|XP_006357140.1| PREDICTED: polygalacturonase-like [Solanum tuberosum]
Length = 393
Score = 72.0 bits (175), Expect = 8e-11
Identities = 36/85 (42%), Positives = 56/85 (65%), Gaps = 1/85 (1%)
Frame = -1
Query: 255 PVILLFLTIISATHASPGEVHDIVDYGARPDRPRFDSSDSLLRAWAAACESTGSPTVSVP 76
P+ FL +I+++ A+ ++++ +YGA+ D + DSS + L AWAAAC ST T++VP
Sbjct: 3 PLAFFFLFLINSSLAANTNIYNVQNYGAKSDG-KTDSSKAFLNAWAAACASTSPATINVP 61
Query: 75 AGDFLVHRAPFAG-PCKSSKITVRI 4
+G +L+H A F G CKS IT+ I
Sbjct: 62 SGKYLIHNAYFNGQTCKSKAITIHI 86
>gb|ESW06331.1| hypothetical protein PHAVU_010G039000g [Phaseolus vulgaris]
Length = 327
Score = 71.6 bits (174), Expect = 1e-10
Identities = 37/90 (41%), Positives = 53/90 (58%)
Frame = -1
Query: 273 MSQLKKPVILLFLTIISATHASPGEVHDIVDYGARPDRPRFDSSDSLLRAWAAACESTGS 94
M+Q+ +LLFL + + G ++V++GA+PD DS+++ L AW AC ST
Sbjct: 1 MAQIVLHALLLFLFTFTPATVAEGATPNVVNFGAKPDGET-DSTNAFLSAWGRACSSTTP 59
Query: 93 PTVSVPAGDFLVHRAPFAGPCKSSKITVRI 4
T+ VP G F V + F GPCK+ ITVRI
Sbjct: 60 TTIHVPLGRFSVGKVVFKGPCKNKGITVRI 89
>ref|XP_006372690.1| hypothetical protein POPTR_0017s03910g [Populus trichocarpa]
gi|550319319|gb|ERP50487.1| hypothetical protein
POPTR_0017s03910g [Populus trichocarpa]
Length = 396
Score = 70.9 bits (172), Expect = 2e-10
Identities = 37/94 (39%), Positives = 57/94 (60%), Gaps = 4/94 (4%)
Frame = -1
Query: 273 MSQLKKPVILLFLTIIS----ATHASPGEVHDIVDYGARPDRPRFDSSDSLLRAWAAACE 106
M+ L+ P+ L LT++S A+ ++ ++ YGA+PD + DS+ + AW+ AC
Sbjct: 1 MASLRLPMSPLLLTLLSIIFLASPSAKAAQFSVLSYGAKPDG-KTDSTKAFAAAWSQACA 59
Query: 105 STGSPTVSVPAGDFLVHRAPFAGPCKSSKITVRI 4
STG T+SVP G F + + F GPCK++ I VRI
Sbjct: 60 STGPATISVPKGSFSLRQVKFQGPCKNNAILVRI 93
>ref|XP_004969212.1| PREDICTED: polygalacturonase-like [Setaria italica]
Length = 394
Score = 70.9 bits (172), Expect = 2e-10
Identities = 39/90 (43%), Positives = 57/90 (63%)
Frame = -1
Query: 273 MSQLKKPVILLFLTIISATHASPGEVHDIVDYGARPDRPRFDSSDSLLRAWAAACESTGS 94
M+++ + L L+ + A+ V+D+ +GA+PD R DSS + AW+AAC S
Sbjct: 1 MARVNACSLALLLSCCILSGAAEAAVYDVAGFGAKPDG-RTDSSTAFADAWSAACRSLEP 59
Query: 93 PTVSVPAGDFLVHRAPFAGPCKSSKITVRI 4
TV VP G+FL+ RA FAGPC SS++TV+I
Sbjct: 60 ATVYVPHGEFLLSRAAFAGPC-SSRVTVQI 88
>ref|XP_004287176.1| PREDICTED: polygalacturonase-like [Fragaria vesca subsp. vesca]
Length = 391
Score = 70.1 bits (170), Expect = 3e-10
Identities = 36/90 (40%), Positives = 53/90 (58%)
Frame = -1
Query: 273 MSQLKKPVILLFLTIISATHASPGEVHDIVDYGARPDRPRFDSSDSLLRAWAAACESTGS 94
M+ + ++L FL I + + + + GA+PD + DS+ + L AWA AC S
Sbjct: 1 MANHRSLILLSFLFIFIYSAIAKAVTYSVTTLGAKPDG-KTDSTKAFLSAWAKACASVKP 59
Query: 93 PTVSVPAGDFLVHRAPFAGPCKSSKITVRI 4
P + VPAG FL+ A F+GPCK+S+IT RI
Sbjct: 60 PVIYVPAGRFLLRNAVFSGPCKNSRITFRI 89
>gb|AAC28902.2| polygalacturonase 3, partial [Solanum lycopersicum]
Length = 365
Score = 70.1 bits (170), Expect = 3e-10
Identities = 35/85 (41%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Frame = -1
Query: 255 PVILLFLTIISATHASPGEVHDIVDYGARPDRPRFDSSDSLLRAWAAACESTGSPTVSVP 76
P+ + FL +I+++ A+ ++++ +YGA+ D DSS++ L AW+AAC ST S T+ VP
Sbjct: 3 PLAIFFLFLINSSLAANTNIYNVQNYGAKSDGET-DSSEAFLSAWSAACASTSSSTIYVP 61
Query: 75 AGDFLVHRAPFAGP-CKSSKITVRI 4
G++L+ A F G C+S+ IT+RI
Sbjct: 62 RGNYLIRNAYFNGKRCQSNAITIRI 86
>gb|AFO53698.1| fruit ripening and abscission polygalacturonase [Elaeis guineensis]
gi|448872674|gb|AGE46022.1| polygalacturonase [Elaeis
guineensis]
Length = 391
Score = 69.7 bits (169), Expect = 4e-10
Identities = 37/91 (40%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Frame = -1
Query: 273 MSQLKKPVILLFLTIISATHASPGEV-HDIVDYGARPDRPRFDSSDSLLRAWAAACESTG 97
M+Q+ LL L I+ +S + +D+ +GA+P+ R DS+ S + AW AAC ST
Sbjct: 1 MTQIMCSFRLLLLAILMIHFSSSVKASYDVTSFGAKPNG-RTDSTKSFISAWTAACHSTN 59
Query: 96 SPTVSVPAGDFLVHRAPFAGPCKSSKITVRI 4
T+ VP+G FL+ F GPC+SS+IT++I
Sbjct: 60 PATIHVPSGFFLIGPVTFNGPCRSSRITIQI 90
>ref|XP_006378843.1| hypothetical protein POPTR_0010s25450g [Populus trichocarpa]
gi|550330587|gb|ERP56640.1| hypothetical protein
POPTR_0010s25450g [Populus trichocarpa]
Length = 373
Score = 69.3 bits (168), Expect = 5e-10
Identities = 34/87 (39%), Positives = 49/87 (56%)
Frame = -1
Query: 264 LKKPVILLFLTIISATHASPGEVHDIVDYGARPDRPRFDSSDSLLRAWAAACESTGSPTV 85
L V+L L ++ ++ + E H+++ YGA+PD DS+ + L AWA AC S T+
Sbjct: 6 LSSCVLLALLVMVFTSYLAIAEQHNVLSYGAKPDGGT-DSTTAFLAAWAQACSSISPSTI 64
Query: 84 SVPAGDFLVHRAPFAGPCKSSKITVRI 4
VP G F + F GPCK+ I VRI
Sbjct: 65 YVPPGRFFLQNVEFKGPCKNKAIVVRI 91
>gb|EMS56561.1| Exopolygalacturonase [Triticum urartu]
Length = 420
Score = 69.3 bits (168), Expect = 5e-10
Identities = 36/104 (34%), Positives = 55/104 (52%), Gaps = 22/104 (21%)
Frame = -1
Query: 249 ILLFLTIISATHAS----------------------PGEVHDIVDYGARPDRPRFDSSDS 136
+LL L ++SA +A+ PG +DI GA+PD D +++
Sbjct: 10 VLLLLVVVSAAYAAKGKEKKKESADGPAASGPAASGPGGEYDITKLGAKPDGTT-DCTEA 68
Query: 135 LLRAWAAACESTGSPTVSVPAGDFLVHRAPFAGPCKSSKITVRI 4
+ AWA+AC STG+PT+ +P GDFL F GPCK +T+++
Sbjct: 69 VEEAWASACGSTGNPTIIIPKGDFLTGALNFTGPCKGDGLTIKL 112
>ref|XP_002529095.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223531446|gb|EEF33279.1| Polygalacturonase precursor,
putative [Ricinus communis]
Length = 390
Score = 69.3 bits (168), Expect = 5e-10
Identities = 33/73 (45%), Positives = 46/73 (63%)
Frame = -1
Query: 243 LFLTIISATHASPGEVHDIVDYGARPDRPRFDSSDSLLRAWAAACESTGSPTVSVPAGDF 64
LFL S++ +++V +GA+PD + DSS + +RAW +AC STG TV VP G F
Sbjct: 10 LFLIFFSSSFHESNAAYNVVSFGAKPDG-KSDSSQAFVRAWLSACRSTGPATVYVPKGSF 68
Query: 63 LVHRAPFAGPCKS 25
LV F+GPCK+
Sbjct: 69 LVKPVEFSGPCKN 81
>gb|EMT30554.1| Polygalacturonase [Aegilops tauschii]
Length = 402
Score = 68.9 bits (167), Expect = 6e-10
Identities = 41/94 (43%), Positives = 57/94 (60%), Gaps = 4/94 (4%)
Frame = -1
Query: 273 MSQLKKPVILLFLTIISATHASPGEVHDIVDYGARPDRPRFDSSDSLLRAWAAACESTGS 94
MS + ++L+ LT + A + +++VDYGARPD DS+ + L AW AAC TG
Sbjct: 4 MSGHRLSLLLVVLTALVAL--TTAAEYNVVDYGARPDGGT-DSAGAFLAAWGAACNDTGR 60
Query: 93 ----PTVSVPAGDFLVHRAPFAGPCKSSKITVRI 4
P + VPAG+FLV RA F GPC+S+ + V I
Sbjct: 61 SGSRPVLRVPAGNFLVSRAYFKGPCRSAGVDVVI 94
>gb|EMT26510.1| Polygalacturonase [Aegilops tauschii]
Length = 395
Score = 68.9 bits (167), Expect = 6e-10
Identities = 41/94 (43%), Positives = 56/94 (59%), Gaps = 4/94 (4%)
Frame = -1
Query: 273 MSQLKKPVILLFLTIISATHASPGEVHDIVDYGARPDRPRFDSSDSLLRAWAAACESTGS 94
MS + ++L+ LT + A A E +++VDYGARPD DS+ + AW AAC TGS
Sbjct: 1 MSGRRLSLLLVALTALVALTAVKAE-YNVVDYGARPDGGA-DSAGAFQAAWGAACNDTGS 58
Query: 93 ----PTVSVPAGDFLVHRAPFAGPCKSSKITVRI 4
P + VP G FL+ RA F GPC+S+ + V I
Sbjct: 59 SGSRPVLRVPTGRFLLSRAYFKGPCRSAGVVVAI 92
>gb|AAC28903.1| polygalacturonase 1 [Solanum lycopersicum]
Length = 392
Score = 68.6 bits (166), Expect = 8e-10
Identities = 35/85 (41%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Frame = -1
Query: 255 PVILLFLTIISATHASPGEVHDIVDYGARPDRPRFDSSDSLLRAWAAACESTGSPTVSVP 76
P + FL +I+++ A+ ++++ +YGA+ D + DSS + L AWAAAC S T++VP
Sbjct: 3 PFAIFFLLLINSSLAANTNIYNVQNYGAKSDG-KTDSSKAFLNAWAAACASNKPSTINVP 61
Query: 75 AGDFLVHRAPFAG-PCKSSKITVRI 4
G +L+H A F G CKS IT+ I
Sbjct: 62 IGKYLIHNANFNGQTCKSKAITMHI 86
>ref|XP_002331662.1| predicted protein [Populus trichocarpa]
Length = 389
Score = 68.2 bits (165), Expect = 1e-09
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Frame = -1
Query: 255 PVILLFLTIIS-ATHASPGEVHDIVDYGARPDRPRFDSSDSLLRAWAAACESTGSPTVSV 79
P++L L+II A+ ++ ++ YGA+PD + DS+ + AW+ AC STG T+SV
Sbjct: 3 PLLLTLLSIIFLASPSAKAAQFSVLSYGAKPDG-KTDSTKAFAAAWSQACASTGPATISV 61
Query: 78 PAGDFLVHRAPFAGPCKSSKITVRI 4
P G F + + F GPCK++ I VRI
Sbjct: 62 PKGSFSLRQVKFQGPCKNNAILVRI 86
>ref|XP_002331659.1| predicted protein [Populus trichocarpa]
gi|566211225|ref|XP_006372686.1| hypothetical protein
POPTR_0017s03870g [Populus trichocarpa]
gi|550319315|gb|ERP50483.1| hypothetical protein
POPTR_0017s03870g [Populus trichocarpa]
Length = 389
Score = 68.2 bits (165), Expect = 1e-09
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Frame = -1
Query: 255 PVILLFLTIIS-ATHASPGEVHDIVDYGARPDRPRFDSSDSLLRAWAAACESTGSPTVSV 79
P++L L+II A+ ++ ++ YGA+PD + DS+ + AW+ AC STG T+SV
Sbjct: 3 PLLLTLLSIIFLASPSAKAAQFSVLSYGAKPDG-KTDSTKAFAAAWSQACASTGPATISV 61
Query: 78 PAGDFLVHRAPFAGPCKSSKITVRI 4
P G F + + F GPCK++ I VRI
Sbjct: 62 PKGSFSLRQVKFQGPCKNNAILVRI 86
>dbj|BAG95892.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 418
Score = 68.2 bits (165), Expect = 1e-09
Identities = 38/99 (38%), Positives = 57/99 (57%)
Frame = -1
Query: 300 NKLLNSR*FMSQLKKPVILLFLTIISATHASPGEVHDIVDYGARPDRPRFDSSDSLLRAW 121
N ++ SR + + V+LL + + A+ V+++ Y ARPD R D+S +L AW
Sbjct: 12 NLVVFSRMARCSVSRVVLLLLCCMHLSAAAAGAAVYNVESYDARPDG-RTDASRALASAW 70
Query: 120 AAACESTGSPTVSVPAGDFLVHRAPFAGPCKSSKITVRI 4
+AAC S TV VP G+F V + FAGPC ++TV+I
Sbjct: 71 SAACRSPEPATVYVPDGEFFVSHSAFAGPCSGGRMTVQI 109
>ref|XP_006493140.1| PREDICTED: polygalacturonase-like [Citrus sinensis]
Length = 395
Score = 67.8 bits (164), Expect = 1e-09
Identities = 32/83 (38%), Positives = 52/83 (62%)
Frame = -1
Query: 252 VILLFLTIISATHASPGEVHDIVDYGARPDRPRFDSSDSLLRAWAAACESTGSPTVSVPA 73
+ +L L+I + + + +++V +GA+PD R DS+ + L AWA AC S + T+ VP
Sbjct: 12 ISILLLSIFNTSSLAAPPSYNVVSFGAKPDG-RTDSTKAFLSAWANACGSPRAATIYVPP 70
Query: 72 GDFLVHRAPFAGPCKSSKITVRI 4
G F + F GPCK+++IT+RI
Sbjct: 71 GRFFLRNVAFQGPCKNNRITIRI 93
>ref|XP_002331630.1| predicted protein [Populus trichocarpa]
Length = 396
Score = 67.8 bits (164), Expect = 1e-09
Identities = 33/84 (39%), Positives = 48/84 (57%)
Frame = -1
Query: 255 PVILLFLTIISATHASPGEVHDIVDYGARPDRPRFDSSDSLLRAWAAACESTGSPTVSVP 76
P+ L F+ + + + H ++ YGA+PD + DS+ + AWA AC ST T+SVP
Sbjct: 12 PITLFFIIYFAFSPLAKAAQHSVLSYGAKPDG-KTDSTKAFAAAWAQACASTQPATISVP 70
Query: 75 AGDFLVHRAPFAGPCKSSKITVRI 4
G F + + F GPCK+ I VRI
Sbjct: 71 KGSFSLGQVRFQGPCKNRAILVRI 94