BLASTX nr result
ID: Zingiber23_contig00054460
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00054460
(262 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006833054.1| hypothetical protein AMTR_s00170p00032020 [A... 112 5e-23
ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containi... 101 1e-19
emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera] 101 1e-19
ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containi... 100 3e-19
emb|CBI32403.3| unnamed protein product [Vitis vinifera] 100 3e-19
gb|EXC20588.1| hypothetical protein L484_027143 [Morus notabilis] 100 3e-19
gb|EXB63285.1| hypothetical protein L484_012475 [Morus notabilis] 99 5e-19
ref|XP_006651209.1| PREDICTED: putative pentatricopeptide repeat... 99 5e-19
ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containi... 99 6e-19
gb|EEE58673.1| hypothetical protein OsJ_10095 [Oryza sativa Japo... 99 8e-19
gb|EEC74844.1| hypothetical protein OsI_10704 [Oryza sativa Indi... 99 8e-19
ref|NP_001049519.2| Os03g0241800 [Oryza sativa Japonica Group] g... 99 8e-19
gb|EMJ08834.1| hypothetical protein PRUPE_ppa021864mg [Prunus pe... 98 1e-18
ref|XP_003590373.1| Pentatricopeptide repeat protein [Medicago t... 98 1e-18
ref|XP_006653490.1| PREDICTED: pentatricopeptide repeat-containi... 97 2e-18
emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera] 97 2e-18
ref|XP_004984577.1| PREDICTED: pentatricopeptide repeat-containi... 97 3e-18
gb|EMJ03215.1| hypothetical protein PRUPE_ppa004939mg [Prunus pe... 97 3e-18
gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonic... 97 3e-18
gb|EOY00090.1| Pentatricopeptide repeat (PPR) superfamily protei... 96 4e-18
>ref|XP_006833054.1| hypothetical protein AMTR_s00170p00032020 [Amborella trichopoda]
gi|548837647|gb|ERM98332.1| hypothetical protein
AMTR_s00170p00032020 [Amborella trichopoda]
Length = 752
Score = 112 bits (280), Expect = 5e-23
Identities = 51/84 (60%), Positives = 65/84 (77%)
Frame = +3
Query: 9 PREGHYALMVDLLARSGRLQDALDLIATMPMKPSLEIWGAMLGACKIHSNLEMGIYTANQ 188
P EGHYA MVD+L R G++++ALDLI MP+K +++W A+LGAC+IHSNL +GIY +
Sbjct: 610 PSEGHYACMVDMLGRVGQVKEALDLIEKMPVKAGVDVWMALLGACRIHSNLNIGIYAGRR 669
Query: 189 IIESGSGNSGYYVLLSNILANFGR 260
IIE GS N G+YVL SN LA FGR
Sbjct: 670 IIELGSENPGFYVLFSNFLAGFGR 693
>ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Vitis vinifera]
Length = 852
Score = 101 bits (251), Expect = 1e-19
Identities = 47/83 (56%), Positives = 63/83 (75%)
Frame = +3
Query: 3 VRPREGHYALMVDLLARSGRLQDALDLIATMPMKPSLEIWGAMLGACKIHSNLEMGIYTA 182
V P HYA MVDLL+R+GRL +A++LI MPMKP+ +W A+L AC++++N+E+G Y A
Sbjct: 613 VVPGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSACRVYANVELGEYAA 672
Query: 183 NQIIESGSGNSGYYVLLSNILAN 251
NQ++E SGN G Y LLSNI AN
Sbjct: 673 NQLLELESGNDGSYTLLSNIYAN 695
>emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]
Length = 871
Score = 101 bits (251), Expect = 1e-19
Identities = 47/83 (56%), Positives = 63/83 (75%)
Frame = +3
Query: 3 VRPREGHYALMVDLLARSGRLQDALDLIATMPMKPSLEIWGAMLGACKIHSNLEMGIYTA 182
V P HYA MVDLL+R+GRL +A++LI MPMKP+ +W A+L AC++++N+E+G Y A
Sbjct: 632 VVPGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSACRVYANVELGEYAA 691
Query: 183 NQIIESGSGNSGYYVLLSNILAN 251
NQ++E SGN G Y LLSNI AN
Sbjct: 692 NQLLELESGNDGSYTLLSNIYAN 714
>ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 891
Score = 100 bits (248), Expect = 3e-19
Identities = 45/86 (52%), Positives = 61/86 (70%)
Frame = +3
Query: 3 VRPREGHYALMVDLLARSGRLQDALDLIATMPMKPSLEIWGAMLGACKIHSNLEMGIYTA 182
++P HY MVDLL R+G L+ A D I MP++P IWGA+LGAC+IH N+E+G + +
Sbjct: 652 IKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIELGKFAS 711
Query: 183 NQIIESGSGNSGYYVLLSNILANFGR 260
+++ E S N GYYVLLSNI AN G+
Sbjct: 712 DRLFEVDSKNVGYYVLLSNIYANVGK 737
>emb|CBI32403.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 100 bits (248), Expect = 3e-19
Identities = 45/86 (52%), Positives = 61/86 (70%)
Frame = +3
Query: 3 VRPREGHYALMVDLLARSGRLQDALDLIATMPMKPSLEIWGAMLGACKIHSNLEMGIYTA 182
++P HY MVDLL R+G L+ A D I MP++P IWGA+LGAC+IH N+E+G + +
Sbjct: 419 IKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIELGKFAS 478
Query: 183 NQIIESGSGNSGYYVLLSNILANFGR 260
+++ E S N GYYVLLSNI AN G+
Sbjct: 479 DRLFEVDSKNVGYYVLLSNIYANVGK 504
>gb|EXC20588.1| hypothetical protein L484_027143 [Morus notabilis]
Length = 778
Score = 99.8 bits (247), Expect = 3e-19
Identities = 44/80 (55%), Positives = 59/80 (73%)
Frame = +3
Query: 21 HYALMVDLLARSGRLQDALDLIATMPMKPSLEIWGAMLGACKIHSNLEMGIYTANQIIES 200
HY MVDLL R+G L+ A D I MP++P IWGA+LGAC+IH N+++G + ++++ E
Sbjct: 545 HYGCMVDLLGRAGHLEAAYDFIKNMPIQPDASIWGALLGACRIHGNVKLGKFASDRLFEV 604
Query: 201 GSGNSGYYVLLSNILANFGR 260
S N GYYVLLSNI ANFG+
Sbjct: 605 DSENIGYYVLLSNIYANFGK 624
>gb|EXB63285.1| hypothetical protein L484_012475 [Morus notabilis]
Length = 858
Score = 99.4 bits (246), Expect = 5e-19
Identities = 47/86 (54%), Positives = 64/86 (74%)
Frame = +3
Query: 3 VRPREGHYALMVDLLARSGRLQDALDLIATMPMKPSLEIWGAMLGACKIHSNLEMGIYTA 182
V P HYA MVDLL R+GRL +AL+LI MPM+P+ +W ++LG C+IH+++E+G Y A
Sbjct: 619 VTPGAEHYACMVDLLGRAGRLGEALELIKGMPMEPTPIVWYSLLGGCRIHAHVEIGEYAA 678
Query: 183 NQIIESGSGNSGYYVLLSNILANFGR 260
N+++E GS N G Y+LLSNI AN R
Sbjct: 679 NKLLELGSQNDGSYILLSNIYANARR 704
>ref|XP_006651209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Oryza brachyantha]
Length = 664
Score = 99.4 bits (246), Expect = 5e-19
Identities = 44/86 (51%), Positives = 62/86 (72%)
Frame = +3
Query: 3 VRPREGHYALMVDLLARSGRLQDALDLIATMPMKPSLEIWGAMLGACKIHSNLEMGIYTA 182
+ P+ HYA MVDLL R+G + +A D I TMP+KP+ +WGA+LGAC+IHSN+++G+ A
Sbjct: 425 ISPKLEHYACMVDLLGRAGCISEAYDFIVTMPIKPNERVWGALLGACRIHSNMDIGLLAA 484
Query: 183 NQIIESGSGNSGYYVLLSNILANFGR 260
+ ++ +GYYVLLSNI A GR
Sbjct: 485 DNLLILAPKQTGYYVLLSNIYARAGR 510
>ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 848
Score = 99.0 bits (245), Expect = 6e-19
Identities = 45/86 (52%), Positives = 60/86 (69%)
Frame = +3
Query: 3 VRPREGHYALMVDLLARSGRLQDALDLIATMPMKPSLEIWGAMLGACKIHSNLEMGIYTA 182
++P HY MVDLL R+G L+ A D I MP+ P IWGA+LGAC+IH N+E+G + +
Sbjct: 609 IKPSLKHYGCMVDLLGRAGFLEMAYDFIKDMPLHPDASIWGALLGACRIHGNIELGKFAS 668
Query: 183 NQIIESGSGNSGYYVLLSNILANFGR 260
+++ E S N GYYVLLSNI AN G+
Sbjct: 669 DRLFEVDSENVGYYVLLSNIYANVGK 694
>gb|EEE58673.1| hypothetical protein OsJ_10095 [Oryza sativa Japonica Group]
Length = 669
Score = 98.6 bits (244), Expect = 8e-19
Identities = 43/86 (50%), Positives = 62/86 (72%)
Frame = +3
Query: 3 VRPREGHYALMVDLLARSGRLQDALDLIATMPMKPSLEIWGAMLGACKIHSNLEMGIYTA 182
+ P+ HYA MVDLL R+G +++A D I MP+KP+ +WGA+LGAC+IHSN+++G+ A
Sbjct: 315 IAPKLEHYACMVDLLGRAGCIREAYDFIMVMPIKPNERVWGALLGACRIHSNMDIGLLAA 374
Query: 183 NQIIESGSGNSGYYVLLSNILANFGR 260
+ ++ +GYYVLLSNI A GR
Sbjct: 375 DSLLRLAPKQTGYYVLLSNIYARAGR 400
>gb|EEC74844.1| hypothetical protein OsI_10704 [Oryza sativa Indica Group]
Length = 614
Score = 98.6 bits (244), Expect = 8e-19
Identities = 43/86 (50%), Positives = 62/86 (72%)
Frame = +3
Query: 3 VRPREGHYALMVDLLARSGRLQDALDLIATMPMKPSLEIWGAMLGACKIHSNLEMGIYTA 182
+ P+ HYA MVDLL R+G +++A D I MP+KP+ +WGA+LGAC+IHSN+++G+ A
Sbjct: 260 IAPKLEHYACMVDLLGRAGCIREAYDFIMVMPIKPNERVWGALLGACRIHSNMDIGLLAA 319
Query: 183 NQIIESGSGNSGYYVLLSNILANFGR 260
+ ++ +GYYVLLSNI A GR
Sbjct: 320 DSLLRLAPKQTGYYVLLSNIYARAGR 345
>ref|NP_001049519.2| Os03g0241800 [Oryza sativa Japonica Group]
gi|108707104|gb|ABF94899.1| pentatricopeptide, putative,
expressed [Oryza sativa Japonica Group]
gi|255674356|dbj|BAF11433.2| Os03g0241800 [Oryza sativa
Japonica Group]
Length = 810
Score = 98.6 bits (244), Expect = 8e-19
Identities = 43/86 (50%), Positives = 62/86 (72%)
Frame = +3
Query: 3 VRPREGHYALMVDLLARSGRLQDALDLIATMPMKPSLEIWGAMLGACKIHSNLEMGIYTA 182
+ P+ HYA MVDLL R+G +++A D I MP+KP+ +WGA+LGAC+IHSN+++G+ A
Sbjct: 425 IAPKLEHYACMVDLLGRAGCIREAYDFIMVMPIKPNERVWGALLGACRIHSNMDIGLLAA 484
Query: 183 NQIIESGSGNSGYYVLLSNILANFGR 260
+ ++ +GYYVLLSNI A GR
Sbjct: 485 DSLLRLAPKQTGYYVLLSNIYARAGR 510
>gb|EMJ08834.1| hypothetical protein PRUPE_ppa021864mg [Prunus persica]
Length = 748
Score = 98.2 bits (243), Expect = 1e-18
Identities = 42/86 (48%), Positives = 61/86 (70%)
Frame = +3
Query: 3 VRPREGHYALMVDLLARSGRLQDALDLIATMPMKPSLEIWGAMLGACKIHSNLEMGIYTA 182
++P HYA MVD+L RSG LQ+A DL+ +MP+ P +WG++L ACKIH+ +E+G+ A
Sbjct: 638 LKPNLKHYACMVDILGRSGNLQEAKDLVLSMPIPPDGGVWGSLLSACKIHNEIELGVRVA 697
Query: 183 NQIIESGSGNSGYYVLLSNILANFGR 260
IES N GYY++LSN+ ++ GR
Sbjct: 698 RHAIESDPENDGYYIMLSNLYSSIGR 723
>ref|XP_003590373.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355479421|gb|AES60624.1| Pentatricopeptide repeat
protein [Medicago truncatula]
Length = 840
Score = 97.8 bits (242), Expect = 1e-18
Identities = 41/86 (47%), Positives = 63/86 (73%)
Frame = +3
Query: 3 VRPREGHYALMVDLLARSGRLQDALDLIATMPMKPSLEIWGAMLGACKIHSNLEMGIYTA 182
V P+ HY +VDLL RSGR+++A + I MP +P+ IWG++LGAC++HSN+++G +
Sbjct: 601 VEPKMEHYGCVVDLLGRSGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHSNVDIGEFAG 660
Query: 183 NQIIESGSGNSGYYVLLSNILANFGR 260
Q++E GN+G YV+LSN+ A+ GR
Sbjct: 661 QQLLEIEPGNAGNYVILSNLYASAGR 686
>ref|XP_006653490.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
mitochondrial-like [Oryza brachyantha]
Length = 774
Score = 97.4 bits (241), Expect = 2e-18
Identities = 43/79 (54%), Positives = 56/79 (70%)
Frame = +3
Query: 3 VRPREGHYALMVDLLARSGRLQDALDLIATMPMKPSLEIWGAMLGACKIHSNLEMGIYTA 182
V P HYA MVDLL +SG L++A D+++ MP+KP IWG +LGACK+H NLEMG+ A
Sbjct: 660 VEPNLKHYACMVDLLGKSGHLEEAEDMVSAMPIKPDGGIWGTLLGACKMHGNLEMGLRVA 719
Query: 183 NQIIESGSGNSGYYVLLSN 239
+ S GN GYY+L+SN
Sbjct: 720 TKAFASDPGNDGYYILMSN 738
>emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
Length = 891
Score = 97.4 bits (241), Expect = 2e-18
Identities = 44/86 (51%), Positives = 60/86 (69%)
Frame = +3
Query: 3 VRPREGHYALMVDLLARSGRLQDALDLIATMPMKPSLEIWGAMLGACKIHSNLEMGIYTA 182
++P HY MVDLL R+G L+ A I MP++P IWGA+LGAC+IH N+E+G + +
Sbjct: 652 IKPSLKHYGCMVDLLGRAGYLEMAYGFIKDMPLQPDASIWGALLGACRIHGNIELGKFAS 711
Query: 183 NQIIESGSGNSGYYVLLSNILANFGR 260
+++ E S N GYYVLLSNI AN G+
Sbjct: 712 DRLFEVDSKNVGYYVLLSNIYANVGK 737
>ref|XP_004984577.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Setaria italica]
Length = 706
Score = 96.7 bits (239), Expect = 3e-18
Identities = 45/86 (52%), Positives = 62/86 (72%)
Frame = +3
Query: 3 VRPREGHYALMVDLLARSGRLQDALDLIATMPMKPSLEIWGAMLGACKIHSNLEMGIYTA 182
VRP HY+ MVDLL R+G L++ALDLI TMP++P IWGA++GAC++H N E+ A
Sbjct: 466 VRPGAEHYSCMVDLLGRAGLLEEALDLIKTMPVEPDAVIWGALMGACRMHKNAEIAEVAA 525
Query: 183 NQIIESGSGNSGYYVLLSNILANFGR 260
+++E GN+G YVLLS+I + GR
Sbjct: 526 KKLLELEPGNAGPYVLLSHIYTSTGR 551
>gb|EMJ03215.1| hypothetical protein PRUPE_ppa004939mg [Prunus persica]
Length = 484
Score = 96.7 bits (239), Expect = 3e-18
Identities = 46/86 (53%), Positives = 59/86 (68%)
Frame = +3
Query: 3 VRPREGHYALMVDLLARSGRLQDALDLIATMPMKPSLEIWGAMLGACKIHSNLEMGIYTA 182
+ P+ GHY MVD+L RSGRL++A DLI +MPMKP+ +WGA+LGAC H +E+ A
Sbjct: 373 LEPKLGHYGCMVDVLGRSGRLKEAHDLIKSMPMKPNAALWGALLGACSTHGEVELAELAA 432
Query: 183 NQIIESGSGNSGYYVLLSNILANFGR 260
++I NSG YVLLSNI A GR
Sbjct: 433 KELINLEPRNSGNYVLLSNIYAEEGR 458
>gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586550|gb|EAZ27214.1| hypothetical protein
OsJ_11153 [Oryza sativa Japonica Group]
Length = 748
Score = 96.7 bits (239), Expect = 3e-18
Identities = 43/86 (50%), Positives = 57/86 (66%)
Frame = +3
Query: 3 VRPREGHYALMVDLLARSGRLQDALDLIATMPMKPSLEIWGAMLGACKIHSNLEMGIYTA 182
++P HYA MVD+ R+G+L DA D I MP+KP IWGA+LGAC+IH N+EMG +
Sbjct: 507 IKPIAKHYACMVDMFGRAGQLDDAFDFIRNMPIKPDSAIWGALLGACRIHGNVEMGKVAS 566
Query: 183 NQIIESGSGNSGYYVLLSNILANFGR 260
+ E N GYYVL+SN+ A G+
Sbjct: 567 QNLFELDPKNVGYYVLMSNMYAKVGK 592
>gb|EOY00090.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
cacao]
Length = 700
Score = 96.3 bits (238), Expect = 4e-18
Identities = 44/84 (52%), Positives = 59/84 (70%)
Frame = +3
Query: 9 PREGHYALMVDLLARSGRLQDALDLIATMPMKPSLEIWGAMLGACKIHSNLEMGIYTANQ 188
P + HY MVDLL R+G L +A +LI TMPMKP +WG++LGACKIH ++ +G Y A +
Sbjct: 526 PLKDHYTCMVDLLGRAGCLNEAKNLIETMPMKPDAVVWGSLLGACKIHRDITLGKYVAEK 585
Query: 189 IIESGSGNSGYYVLLSNILANFGR 260
++E NSG YVLLSN+ A G+
Sbjct: 586 LLEIDPSNSGPYVLLSNMYAELGK 609