BLASTX nr result

ID: Zingiber23_contig00054419 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00054419
         (234 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003588337.1| Ribosomal protein S10 [Medicago truncatula] ...    73   5e-11
ref|XP_003588412.1| Ribosomal protein S10 [Medicago truncatula] ...    64   2e-08

>ref|XP_003588337.1| Ribosomal protein S10 [Medicago truncatula]
            gi|355477385|gb|AES58588.1| Ribosomal protein S10
            [Medicago truncatula]
          Length = 1152

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 41/60 (68%), Positives = 46/60 (76%), Gaps = 1/60 (1%)
 Frame = -3

Query: 232  RSPF-LAAMGSTCEQGKPNGMGTKKGEGTALGRRRSKKRRLTLGEIGDR*LASKPARPQG 56
            RSPF LAAMGSTC+QGKPNG   ++G    LGRRRSKKRRLTL +     LASKPARP+G
Sbjct: 986  RSPFFLAAMGSTCKQGKPNGNQKREGTTLTLGRRRSKKRRLTLLK-----LASKPARPRG 1040


>ref|XP_003588412.1| Ribosomal protein S10 [Medicago truncatula]
           gi|355477460|gb|AES58663.1| Ribosomal protein S10
           [Medicago truncatula]
          Length = 159

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 34/52 (65%), Positives = 39/52 (75%)
 Frame = -3

Query: 211 MGSTCEQGKPNGMGTKKGEGTALGRRRSKKRRLTLGEIGDR*LASKPARPQG 56
           MGSTC+QGKPNG   ++G    LGRRRSKKRRLTL +     LASKPARP+G
Sbjct: 1   MGSTCKQGKPNGNQKREGTTLTLGRRRSKKRRLTLLK-----LASKPARPRG 47


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