BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00054325
         (255 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004961630.1| PREDICTED: structural maintenance of chromos...    63   5e-08
ref|XP_006431152.1| hypothetical protein CICLE_v10010934mg [Citr...    61   2e-07
gb|AAT07581.1| putative SMC protein [Oryza sativa Japonica Group...    61   2e-07
emb|CAD32690.1| SMC4 protein [Oryza sativa]                            61   2e-07
ref|XP_006655449.1| PREDICTED: structural maintenance of chromos...    60   2e-07
ref|NP_199671.1| structural maintenance of chromosomes protein 4...    60   2e-07
gb|AFW78537.1| hypothetical protein ZEAMMB73_053127 [Zea mays]         60   2e-07
gb|AFW78536.1| hypothetical protein ZEAMMB73_053127 [Zea mays]         60   2e-07
ref|XP_003633856.1| PREDICTED: structural maintenance of chromos...    60   2e-07
ref|NP_001190492.1| structural maintenance of chromosomes protei...    60   2e-07
emb|CBI22212.3| unnamed protein product [Vitis vinifera]               60   2e-07
ref|XP_002440011.1| hypothetical protein SORBIDRAFT_09g024390 [S...    60   2e-07
ref|XP_006373322.1| hypothetical protein POPTR_0017s11950g [Popu...    60   3e-07
ref|XP_002323859.1| hypothetical protein POPTR_0017s11950g [Popu...    60   3e-07
gb|EOY03465.1| Structural maintenance of chromosome 3 isoform 2 ...    60   4e-07
gb|EOY03464.1| Structural maintenance of chromosome 3 isoform 1 ...    60   4e-07
ref|XP_006849882.1| hypothetical protein AMTR_s00022p00079920 [A...    59   7e-07
ref|XP_006338449.1| PREDICTED: structural maintenance of chromos...    59   9e-07
ref|XP_004233681.1| PREDICTED: structural maintenance of chromos...    59   9e-07
gb|EXB31972.1| Structural maintenance of chromosomes protein 4 [...    58   1e-06

>ref|XP_004961630.1| PREDICTED: structural maintenance of chromosomes protein 4-like
           [Setaria italica]
          Length = 1243

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 31/48 (64%), Positives = 33/48 (68%)
 Frame = +2

Query: 110 SMESETGAGGTHTPPSTRRARLVITEMVLRNFKSYAGEQRIGPFHKSF 253
           +ME+        TP    R RL I EMVLRNFKSYAGEQRIGPFHKSF
Sbjct: 2   AMETSPPQSPARTPGRAARPRLFIKEMVLRNFKSYAGEQRIGPFHKSF 49


>ref|XP_006431152.1| hypothetical protein CICLE_v10010934mg [Citrus clementina]
           gi|567877127|ref|XP_006431153.1| hypothetical protein
           CICLE_v10010934mg [Citrus clementina]
           gi|557533209|gb|ESR44392.1| hypothetical protein
           CICLE_v10010934mg [Citrus clementina]
           gi|557533210|gb|ESR44393.1| hypothetical protein
           CICLE_v10010934mg [Citrus clementina]
          Length = 1239

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 28/41 (68%), Positives = 33/41 (80%)
 Frame = +2

Query: 131 AGGTHTPPSTRRARLVITEMVLRNFKSYAGEQRIGPFHKSF 253
           A  + +P S +R RL I EMV+RNFKSYAGEQR+GPFHKSF
Sbjct: 6   ADDSASPGSRKRPRLFIKEMVMRNFKSYAGEQRVGPFHKSF 46


>gb|AAT07581.1| putative SMC protein [Oryza sativa Japonica Group]
           gi|218197032|gb|EEC79459.1| hypothetical protein
           OsI_20467 [Oryza sativa Indica Group]
           gi|222632094|gb|EEE64226.1| hypothetical protein
           OsJ_19059 [Oryza sativa Japonica Group]
          Length = 1241

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 31/47 (65%), Positives = 32/47 (68%)
 Frame = +2

Query: 113 MESETGAGGTHTPPSTRRARLVITEMVLRNFKSYAGEQRIGPFHKSF 253
           MES        +P    R RL I EMVLRNFKSYAGEQRIGPFHKSF
Sbjct: 1   MESSPPRSPAPSPGRAGRPRLFIKEMVLRNFKSYAGEQRIGPFHKSF 47


>emb|CAD32690.1| SMC4 protein [Oryza sativa]
          Length = 1236

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 31/47 (65%), Positives = 32/47 (68%)
 Frame = +2

Query: 113 MESETGAGGTHTPPSTRRARLVITEMVLRNFKSYAGEQRIGPFHKSF 253
           MES        +P    R RL I EMVLRNFKSYAGEQRIGPFHKSF
Sbjct: 1   MESSPPRSPAPSPGRAGRPRLFIKEMVLRNFKSYAGEQRIGPFHKSF 47


>ref|XP_006655449.1| PREDICTED: structural maintenance of chromosomes protein 4-like
           [Oryza brachyantha]
          Length = 1239

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 30/47 (63%), Positives = 32/47 (68%)
 Frame = +2

Query: 113 MESETGAGGTHTPPSTRRARLVITEMVLRNFKSYAGEQRIGPFHKSF 253
           M+S        +P    R RL I EMVLRNFKSYAGEQRIGPFHKSF
Sbjct: 1   MDSSPSMSPAPSPGRAGRPRLFIKEMVLRNFKSYAGEQRIGPFHKSF 47


>ref|NP_199671.1| structural maintenance of chromosomes protein 4 [Arabidopsis
           thaliana] gi|75333958|sp|Q9FJL0.1|SMC4_ARATH RecName:
           Full=Structural maintenance of chromosomes protein 4;
           Short=AtSMC4; Short=SMC protein 4; Short=SMC-4; AltName:
           Full=Chromosome-associated protein C; Short=AtCAP-C
           gi|10177350|dbj|BAB10693.1| chromosome condensation
           protein [Arabidopsis thaliana]
           gi|332008311|gb|AED95694.1| structural maintenance of
           chromosomes protein 4 [Arabidopsis thaliana]
          Length = 1241

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)
 Frame = +2

Query: 113 MESETGAGGTHTPPSTRRA---RLVITEMVLRNFKSYAGEQRIGPFHKSF 253
           ME +   GG  + P  R++   RL I E+V+RNFKSYAGEQR+GPFHKSF
Sbjct: 1   MEEDEPMGGGESEPEQRKSGTPRLYIKELVMRNFKSYAGEQRVGPFHKSF 50


>gb|AFW78537.1| hypothetical protein ZEAMMB73_053127 [Zea mays]
          Length = 1388

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 30/48 (62%), Positives = 32/48 (66%)
 Frame = +2

Query: 110 SMESETGAGGTHTPPSTRRARLVITEMVLRNFKSYAGEQRIGPFHKSF 253
           +ME         TP    + RL I EMVLRNFKSYAGEQRIGPFHKSF
Sbjct: 190 AMEMSPRQSPPRTPRRAAKPRLFIKEMVLRNFKSYAGEQRIGPFHKSF 237


>gb|AFW78536.1| hypothetical protein ZEAMMB73_053127 [Zea mays]
          Length = 1337

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 30/48 (62%), Positives = 32/48 (66%)
 Frame = +2

Query: 110 SMESETGAGGTHTPPSTRRARLVITEMVLRNFKSYAGEQRIGPFHKSF 253
           +ME         TP    + RL I EMVLRNFKSYAGEQRIGPFHKSF
Sbjct: 190 AMEMSPRQSPPRTPRRAAKPRLFIKEMVLRNFKSYAGEQRIGPFHKSF 237


>ref|XP_003633856.1| PREDICTED: structural maintenance of chromosomes protein 4-like
           [Vitis vinifera]
          Length = 1486

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 29/52 (55%), Positives = 33/52 (63%)
 Frame = +2

Query: 98  ARVTSMESETGAGGTHTPPSTRRARLVITEMVLRNFKSYAGEQRIGPFHKSF 253
           +R    E     G    P  +R  RL I EMV+RNFKSYAGEQR+GPFHKSF
Sbjct: 242 SRTKPPEESVSNGSDSGPGRSRAPRLFIKEMVMRNFKSYAGEQRVGPFHKSF 293


>ref|NP_001190492.1| structural maintenance of chromosomes protein 4 [Arabidopsis
           thaliana] gi|332008312|gb|AED95695.1| structural
           maintenance of chromosomes protein 4 [Arabidopsis
           thaliana]
          Length = 1244

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 3/50 (6%)
 Frame = +2

Query: 113 MESETGAGGTHTPPSTRRA---RLVITEMVLRNFKSYAGEQRIGPFHKSF 253
           ME +   GG  + P  R++   RL I E+V+RNFKSYAGEQR+GPFHKSF
Sbjct: 1   MEEDEPMGGGESEPEQRKSGTPRLYIKELVMRNFKSYAGEQRVGPFHKSF 50


>emb|CBI22212.3| unnamed protein product [Vitis vinifera]
          Length = 1253

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 29/52 (55%), Positives = 33/52 (63%)
 Frame = +2

Query: 98  ARVTSMESETGAGGTHTPPSTRRARLVITEMVLRNFKSYAGEQRIGPFHKSF 253
           +R    E     G    P  +R  RL I EMV+RNFKSYAGEQR+GPFHKSF
Sbjct: 3   SRTKPPEESVSNGSDSGPGRSRAPRLFIKEMVMRNFKSYAGEQRVGPFHKSF 54


>ref|XP_002440011.1| hypothetical protein SORBIDRAFT_09g024390 [Sorghum bicolor]
           gi|241945296|gb|EES18441.1| hypothetical protein
           SORBIDRAFT_09g024390 [Sorghum bicolor]
          Length = 1244

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 33/42 (78%), Positives = 34/42 (80%), Gaps = 4/42 (9%)
 Frame = +2

Query: 140 THTPPST-RRA---RLVITEMVLRNFKSYAGEQRIGPFHKSF 253
           T +PP T RRA   RL I EMVLRNFKSYAGEQRIGPFHKSF
Sbjct: 8   TQSPPRTPRRAAKPRLFIKEMVLRNFKSYAGEQRIGPFHKSF 49


>ref|XP_006373322.1| hypothetical protein POPTR_0017s11950g [Populus trichocarpa]
           gi|550320084|gb|ERP51119.1| hypothetical protein
           POPTR_0017s11950g [Populus trichocarpa]
          Length = 1300

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 28/47 (59%), Positives = 35/47 (74%)
 Frame = +2

Query: 113 MESETGAGGTHTPPSTRRARLVITEMVLRNFKSYAGEQRIGPFHKSF 253
           M SE+ +  T    S++  RL I EM++RNFKSYAGEQR+GPFHKSF
Sbjct: 11  MTSESNSVRTSAGGSSKAPRLFIKEMIMRNFKSYAGEQRVGPFHKSF 57


>ref|XP_002323859.1| hypothetical protein POPTR_0017s11950g [Populus trichocarpa]
           gi|222866861|gb|EEF03992.1| hypothetical protein
           POPTR_0017s11950g [Populus trichocarpa]
          Length = 1256

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 28/47 (59%), Positives = 35/47 (74%)
 Frame = +2

Query: 113 MESETGAGGTHTPPSTRRARLVITEMVLRNFKSYAGEQRIGPFHKSF 253
           M SE+ +  T    S++  RL I EM++RNFKSYAGEQR+GPFHKSF
Sbjct: 11  MTSESNSVRTSAGGSSKAPRLFIKEMIMRNFKSYAGEQRVGPFHKSF 57


>gb|EOY03465.1| Structural maintenance of chromosome 3 isoform 2 [Theobroma cacao]
          Length = 1239

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 30/56 (53%), Positives = 37/56 (66%)
 Frame = +2

Query: 86  LRSRARVTSMESETGAGGTHTPPSTRRARLVITEMVLRNFKSYAGEQRIGPFHKSF 253
           ++S     + E +   GG+  P      RLVI EMV+RNFKSYAGEQR+GPFHKSF
Sbjct: 3   IKSSDEHATREPDQARGGSRGP------RLVINEMVMRNFKSYAGEQRVGPFHKSF 52


>gb|EOY03464.1| Structural maintenance of chromosome 3 isoform 1 [Theobroma cacao]
          Length = 1245

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 30/56 (53%), Positives = 37/56 (66%)
 Frame = +2

Query: 86  LRSRARVTSMESETGAGGTHTPPSTRRARLVITEMVLRNFKSYAGEQRIGPFHKSF 253
           ++S     + E +   GG+  P      RLVI EMV+RNFKSYAGEQR+GPFHKSF
Sbjct: 3   IKSSDEHATREPDQARGGSRGP------RLVINEMVMRNFKSYAGEQRVGPFHKSF 52


>ref|XP_006849882.1| hypothetical protein AMTR_s00022p00079920 [Amborella trichopoda]
           gi|548853480|gb|ERN11463.1| hypothetical protein
           AMTR_s00022p00079920 [Amborella trichopoda]
          Length = 1241

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 29/49 (59%), Positives = 36/49 (73%), Gaps = 2/49 (4%)
 Frame = +2

Query: 113 MESETGAGGTHTPPSTRRA--RLVITEMVLRNFKSYAGEQRIGPFHKSF 253
           MES+    G  +P + R+   RL I EMV++NFKSYAGEQR+GPFHKSF
Sbjct: 1   MESDIPMTGAESPLTRRKEKPRLFIKEMVMKNFKSYAGEQRVGPFHKSF 49


>ref|XP_006338449.1| PREDICTED: structural maintenance of chromosomes protein 4-like
           [Solanum tuberosum]
          Length = 1246

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 26/34 (76%), Positives = 29/34 (85%)
 Frame = +2

Query: 152 PSTRRARLVITEMVLRNFKSYAGEQRIGPFHKSF 253
           P +R  RL I EMV+RNFKSYAGEQR+GPFHKSF
Sbjct: 20  PGSRPPRLFIKEMVMRNFKSYAGEQRVGPFHKSF 53


>ref|XP_004233681.1| PREDICTED: structural maintenance of chromosomes protein 4-like
           [Solanum lycopersicum]
          Length = 1246

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 26/34 (76%), Positives = 29/34 (85%)
 Frame = +2

Query: 152 PSTRRARLVITEMVLRNFKSYAGEQRIGPFHKSF 253
           P +R  RL I EMV+RNFKSYAGEQR+GPFHKSF
Sbjct: 20  PGSRPPRLFIKEMVMRNFKSYAGEQRVGPFHKSF 53


>gb|EXB31972.1| Structural maintenance of chromosomes protein 4 [Morus notabilis]
          Length = 1239

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 26/35 (74%), Positives = 29/35 (82%)
 Frame = +2

Query: 149 PPSTRRARLVITEMVLRNFKSYAGEQRIGPFHKSF 253
           P  +R  RL I EMV+RNFKSYAGEQR+GPFHKSF
Sbjct: 16  PERSRGPRLFIKEMVMRNFKSYAGEQRVGPFHKSF 50