BLASTX nr result
ID: Zingiber23_contig00054317
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00054317
(442 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_007475694.1| RNA polymerase beta' subunit [Zingiber spect... 283 2e-74
ref|YP_008854584.1| RNA polymerase beta' subunit [Curcuma roscoe... 281 6e-74
gb|AGE93360.1| RNA polymerase beta' subunit [Alpinia zerumbet] 280 1e-73
emb|CCW72365.1| rpoC2 (chloroplast) [Musa acuminata subsp. malac... 267 9e-70
ref|YP_007475609.1| RNA polymerase beta' subunit [Heliconia coll... 267 9e-70
gb|ABU85465.1| RNA polymerase beta subunit [Musa acuminata] 267 9e-70
ref|YP_008854415.1| RNA polymerase beta' subunit [Musa textilis]... 265 4e-69
gb|AEZ49480.1| RNA polymerase beta'' subunit, partial [Fosterell... 264 8e-69
gb|AHA12745.1| RNA polymerase beta' subunit [Canna indica] 263 2e-68
gb|AEX94825.1| RNA polymerase beta' subunit (chloroplast) [Oziro... 262 4e-68
gb|AEZ49495.1| RNA polymerase beta'' subunit, partial [Ravenea h... 261 5e-68
gb|AEZ49469.1| RNA polymerase beta'' subunit [Albuca kirkii] 261 5e-68
gb|AEX94823.1| RNA polymerase beta' subunit (chloroplast) [Drimi... 261 5e-68
gb|AEX94812.1| RNA polymerase beta' subunit (chloroplast) [Eucha... 261 5e-68
gb|AEX94810.1| RNA polymerase beta' subunit (chloroplast) [Amary... 261 5e-68
gb|AEX94806.1| RNA polymerase beta' subunit (chloroplast) [Polia... 261 5e-68
gb|AEX94805.1| RNA polymerase beta' subunit (chloroplast) [Manfr... 261 5e-68
gb|AEX94804.1| RNA polymerase beta' subunit (chloroplast) [Hosta... 261 5e-68
ref|YP_003540921.1| DNA-directed RNA polymerase beta' chain [Pho... 261 5e-68
gb|AHI87517.1| RNA polymerase beta subunit (chloroplast) [Chiono... 261 7e-68
>ref|YP_007475694.1| RNA polymerase beta' subunit [Zingiber spectabile]
gi|449326174|gb|AGE92759.1| RNA polymerase beta' subunit
[Zingiber spectabile]
Length = 1380
Score = 283 bits (723), Expect = 2e-74
Identities = 146/147 (99%), Positives = 146/147 (99%)
Frame = -2
Query: 441 EIIVRQVTSKVLVSEDGMSNVFLPGELIGLLRAERVGRALDEAISYRAILLGITRTSLNT 262
EIIVRQVTSKVLVSEDGMSNVF PGELIGLLRAERVGRALDEAISYRAILLGITRTSLNT
Sbjct: 1214 EIIVRQVTSKVLVSEDGMSNVFSPGELIGLLRAERVGRALDEAISYRAILLGITRTSLNT 1273
Query: 261 QSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFKKLVHHSSKDKNF 82
QSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFKKLVHHSSKDKNF
Sbjct: 1274 QSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFKKLVHHSSKDKNF 1333
Query: 81 YLEIKRKNLFDLEIKDLLLHHRELFCS 1
YLEIKRKNLFDLEIKDLLLHHRELFCS
Sbjct: 1334 YLEIKRKNLFDLEIKDLLLHHRELFCS 1360
>ref|YP_008854584.1| RNA polymerase beta' subunit [Curcuma roscoeana]
gi|557637491|gb|AHA13086.1| RNA polymerase beta' subunit
[Curcuma roscoeana]
Length = 1375
Score = 281 bits (719), Expect = 6e-74
Identities = 145/147 (98%), Positives = 146/147 (99%)
Frame = -2
Query: 441 EIIVRQVTSKVLVSEDGMSNVFLPGELIGLLRAERVGRALDEAISYRAILLGITRTSLNT 262
EIIVRQVTSKVLVSEDGMSNVF PGELIGLLRAERVGRALDEAISYRAILLGITRTSLNT
Sbjct: 1209 EIIVRQVTSKVLVSEDGMSNVFSPGELIGLLRAERVGRALDEAISYRAILLGITRTSLNT 1268
Query: 261 QSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFKKLVHHSSKDKNF 82
QSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFKKLVHHSSK+KNF
Sbjct: 1269 QSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFKKLVHHSSKEKNF 1328
Query: 81 YLEIKRKNLFDLEIKDLLLHHRELFCS 1
YLEIKRKNLFDLEIKDLLLHHRELFCS
Sbjct: 1329 YLEIKRKNLFDLEIKDLLLHHRELFCS 1355
>gb|AGE93360.1| RNA polymerase beta' subunit [Alpinia zerumbet]
Length = 1375
Score = 280 bits (716), Expect = 1e-73
Identities = 145/147 (98%), Positives = 145/147 (98%)
Frame = -2
Query: 441 EIIVRQVTSKVLVSEDGMSNVFLPGELIGLLRAERVGRALDEAISYRAILLGITRTSLNT 262
EIIVRQVTSKVLVSEDGMSNVF PGELIGLLRAERVGRALDEAISYRAILLGITRTSLNT
Sbjct: 1214 EIIVRQVTSKVLVSEDGMSNVFSPGELIGLLRAERVGRALDEAISYRAILLGITRTSLNT 1273
Query: 261 QSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFKKLVHHSSKDKNF 82
QSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFKKLVHHSSKDKNF
Sbjct: 1274 QSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFKKLVHHSSKDKNF 1333
Query: 81 YLEIKRKNLFDLEIKDLLLHHRELFCS 1
YLEIKRKNLFDLEIKDLLLHH ELFCS
Sbjct: 1334 YLEIKRKNLFDLEIKDLLLHHGELFCS 1360
>emb|CCW72365.1| rpoC2 (chloroplast) [Musa acuminata subsp. malaccensis]
Length = 1364
Score = 267 bits (683), Expect = 9e-70
Identities = 137/147 (93%), Positives = 141/147 (95%)
Frame = -2
Query: 441 EIIVRQVTSKVLVSEDGMSNVFLPGELIGLLRAERVGRALDEAISYRAILLGITRTSLNT 262
EIIVRQVTSKVLVSEDGMSNVF PGELIGLLRAER GRALDEAISYRAILLGITR SLNT
Sbjct: 1213 EIIVRQVTSKVLVSEDGMSNVFSPGELIGLLRAERAGRALDEAISYRAILLGITRASLNT 1272
Query: 261 QSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFKKLVHHSSKDKNF 82
QSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFKKLVH S +DKN
Sbjct: 1273 QSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFKKLVHRSRQDKNI 1332
Query: 81 YLEIKRKNLFDLEIKDLLLHHRELFCS 1
YLEIKRKNLFDLE++D+LLHHRELFCS
Sbjct: 1333 YLEIKRKNLFDLEMRDILLHHRELFCS 1359
>ref|YP_007475609.1| RNA polymerase beta' subunit [Heliconia collinsiana]
gi|449326088|gb|AGE92674.1| RNA polymerase beta' subunit
[Heliconia collinsiana]
Length = 1384
Score = 267 bits (683), Expect = 9e-70
Identities = 137/147 (93%), Positives = 141/147 (95%)
Frame = -2
Query: 441 EIIVRQVTSKVLVSEDGMSNVFLPGELIGLLRAERVGRALDEAISYRAILLGITRTSLNT 262
EIIVRQVTSKVLVSEDGMSNVF PGELIGLLRAER GRALDEAISYRAILLGITR SLNT
Sbjct: 1213 EIIVRQVTSKVLVSEDGMSNVFSPGELIGLLRAERAGRALDEAISYRAILLGITRASLNT 1272
Query: 261 QSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFKKLVHHSSKDKNF 82
QSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFKKLVH S +DKN
Sbjct: 1273 QSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFKKLVHRSRQDKNI 1332
Query: 81 YLEIKRKNLFDLEIKDLLLHHRELFCS 1
YLEIKRKNLFDLE++D+LLHHRELFCS
Sbjct: 1333 YLEIKRKNLFDLEMRDILLHHRELFCS 1359
>gb|ABU85465.1| RNA polymerase beta subunit [Musa acuminata]
Length = 1359
Score = 267 bits (683), Expect = 9e-70
Identities = 137/147 (93%), Positives = 141/147 (95%)
Frame = -2
Query: 441 EIIVRQVTSKVLVSEDGMSNVFLPGELIGLLRAERVGRALDEAISYRAILLGITRTSLNT 262
EIIVRQVTSKVLVSEDGMSNVF PGELIGLLRAER GRALDEAISYRAILLGITR SLNT
Sbjct: 1213 EIIVRQVTSKVLVSEDGMSNVFSPGELIGLLRAERAGRALDEAISYRAILLGITRASLNT 1272
Query: 261 QSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFKKLVHHSSKDKNF 82
QSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFKKLVH S +DKN
Sbjct: 1273 QSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFKKLVHRSRQDKNI 1332
Query: 81 YLEIKRKNLFDLEIKDLLLHHRELFCS 1
YLEIKRKNLFDLE++D+LLHHRELFCS
Sbjct: 1333 YLEIKRKNLFDLEMRDILLHHRELFCS 1359
>ref|YP_008854415.1| RNA polymerase beta' subunit [Musa textilis]
gi|557636902|gb|AHA12504.1| RNA polymerase beta' subunit
[Musa textilis]
Length = 1364
Score = 265 bits (678), Expect = 4e-69
Identities = 136/147 (92%), Positives = 141/147 (95%)
Frame = -2
Query: 441 EIIVRQVTSKVLVSEDGMSNVFLPGELIGLLRAERVGRALDEAISYRAILLGITRTSLNT 262
EIIVRQVTSKVLVSEDGMSNVF PGELIGLLRAER GRALDEAISYRAILLGITR SLNT
Sbjct: 1213 EIIVRQVTSKVLVSEDGMSNVFSPGELIGLLRAERAGRALDEAISYRAILLGITRASLNT 1272
Query: 261 QSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFKKLVHHSSKDKNF 82
QSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFKKLVH S +DK+
Sbjct: 1273 QSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFKKLVHRSRQDKSI 1332
Query: 81 YLEIKRKNLFDLEIKDLLLHHRELFCS 1
YLEIKRKNLFDLE++D+LLHHRELFCS
Sbjct: 1333 YLEIKRKNLFDLEMRDILLHHRELFCS 1359
>gb|AEZ49480.1| RNA polymerase beta'' subunit, partial [Fosterella caulescens]
Length = 1388
Score = 264 bits (675), Expect = 8e-69
Identities = 134/147 (91%), Positives = 140/147 (95%)
Frame = -2
Query: 441 EIIVRQVTSKVLVSEDGMSNVFLPGELIGLLRAERVGRALDEAISYRAILLGITRTSLNT 262
EIIVRQVTSKVLVSEDGMSNVF PGELIGLLRAER GRALDE+I YRAILLGITR SLNT
Sbjct: 1217 EIIVRQVTSKVLVSEDGMSNVFSPGELIGLLRAERAGRALDESICYRAILLGITRASLNT 1276
Query: 261 QSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFKKLVHHSSKDKNF 82
QSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFKK VHHS +DKN
Sbjct: 1277 QSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFKKFVHHSRQDKNI 1336
Query: 81 YLEIKRKNLFDLEIKDLLLHHRELFCS 1
YLEIKRKNLF+LE++D+LLHHRELFCS
Sbjct: 1337 YLEIKRKNLFELEMRDILLHHRELFCS 1363
>gb|AHA12745.1| RNA polymerase beta' subunit [Canna indica]
Length = 1371
Score = 263 bits (672), Expect = 2e-68
Identities = 135/147 (91%), Positives = 139/147 (94%)
Frame = -2
Query: 441 EIIVRQVTSKVLVSEDGMSNVFLPGELIGLLRAERVGRALDEAISYRAILLGITRTSLNT 262
EIIVRQVTSKVLVSEDGMSNVF PGELIGLLRAER GRALDEAISYRAILLGITR SLNT
Sbjct: 1205 EIIVRQVTSKVLVSEDGMSNVFSPGELIGLLRAERAGRALDEAISYRAILLGITRASLNT 1264
Query: 261 QSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFKKLVHHSSKDKNF 82
QSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGG+IPVGTGFK LVH S +DKN
Sbjct: 1265 QSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGLIPVGTGFKNLVHRSRQDKNI 1324
Query: 81 YLEIKRKNLFDLEIKDLLLHHRELFCS 1
YLEIK KNLFDLEI+D+LLHHRELFCS
Sbjct: 1325 YLEIKGKNLFDLEIRDILLHHRELFCS 1351
>gb|AEX94825.1| RNA polymerase beta' subunit (chloroplast) [Oziroe biflora]
Length = 1386
Score = 262 bits (669), Expect = 4e-68
Identities = 134/147 (91%), Positives = 139/147 (94%)
Frame = -2
Query: 441 EIIVRQVTSKVLVSEDGMSNVFLPGELIGLLRAERVGRALDEAISYRAILLGITRTSLNT 262
EIIVRQVTSKVLVSEDGMSNVFLPGELIGLLRAE+ GRALDEAI YRAILLGITR SLNT
Sbjct: 1220 EIIVRQVTSKVLVSEDGMSNVFLPGELIGLLRAEQAGRALDEAICYRAILLGITRASLNT 1279
Query: 261 QSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFKKLVHHSSKDKNF 82
QSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFKKLVH S +DKN
Sbjct: 1280 QSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFKKLVHRSRQDKNI 1339
Query: 81 YLEIKRKNLFDLEIKDLLLHHRELFCS 1
YLEIK+KNLF LE+KD+LLHHRE FCS
Sbjct: 1340 YLEIKKKNLFKLEMKDILLHHREFFCS 1366
>gb|AEZ49495.1| RNA polymerase beta'' subunit, partial [Ravenea hildebrandtii]
Length = 1385
Score = 261 bits (668), Expect = 5e-68
Identities = 134/147 (91%), Positives = 140/147 (95%)
Frame = -2
Query: 441 EIIVRQVTSKVLVSEDGMSNVFLPGELIGLLRAERVGRALDEAISYRAILLGITRTSLNT 262
EIIVRQVTSKVLVSEDGMSNVFLPGELIG LRAER GRALDEAI YRAILLGITR SLNT
Sbjct: 1214 EIIVRQVTSKVLVSEDGMSNVFLPGELIGFLRAERAGRALDEAIRYRAILLGITRASLNT 1273
Query: 261 QSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFKKLVHHSSKDKNF 82
QSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGF+KLVH S +DKN
Sbjct: 1274 QSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFQKLVHPSRQDKNI 1333
Query: 81 YLEIKRKNLFDLEIKDLLLHHRELFCS 1
+LEIKRKNLF+LEI+D+LLHHRELFCS
Sbjct: 1334 HLEIKRKNLFELEIRDILLHHRELFCS 1360
>gb|AEZ49469.1| RNA polymerase beta'' subunit [Albuca kirkii]
Length = 1386
Score = 261 bits (668), Expect = 5e-68
Identities = 133/147 (90%), Positives = 140/147 (95%)
Frame = -2
Query: 441 EIIVRQVTSKVLVSEDGMSNVFLPGELIGLLRAERVGRALDEAISYRAILLGITRTSLNT 262
EIIVRQVTSKVLVSEDGMSNVFLPGELIGLLRAER GRALDEAI YRAILLGITR SLNT
Sbjct: 1220 EIIVRQVTSKVLVSEDGMSNVFLPGELIGLLRAERAGRALDEAICYRAILLGITRASLNT 1279
Query: 261 QSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFKKLVHHSSKDKNF 82
QSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFKKLVH S +DKN
Sbjct: 1280 QSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFKKLVHRSRQDKNI 1339
Query: 81 YLEIKRKNLFDLEIKDLLLHHRELFCS 1
+LEIK+KNLF+LE++D+LLHHRE FCS
Sbjct: 1340 HLEIKKKNLFELEMRDILLHHREFFCS 1366
>gb|AEX94823.1| RNA polymerase beta' subunit (chloroplast) [Drimia altissima]
Length = 1386
Score = 261 bits (668), Expect = 5e-68
Identities = 133/147 (90%), Positives = 140/147 (95%)
Frame = -2
Query: 441 EIIVRQVTSKVLVSEDGMSNVFLPGELIGLLRAERVGRALDEAISYRAILLGITRTSLNT 262
EIIVRQVTSKVLVSEDGMSNVFLPGELIGLLRAER GRALDEAI YRAILLGITR SLNT
Sbjct: 1220 EIIVRQVTSKVLVSEDGMSNVFLPGELIGLLRAERAGRALDEAICYRAILLGITRASLNT 1279
Query: 261 QSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFKKLVHHSSKDKNF 82
QSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFKKLVH S +DKN
Sbjct: 1280 QSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFKKLVHRSRQDKNI 1339
Query: 81 YLEIKRKNLFDLEIKDLLLHHRELFCS 1
+LEIK+KNLF+LE++D+LLHHRE FCS
Sbjct: 1340 HLEIKKKNLFELEMRDILLHHREFFCS 1366
>gb|AEX94812.1| RNA polymerase beta' subunit (chloroplast) [Eucharis x grandiflora]
Length = 1343
Score = 261 bits (668), Expect = 5e-68
Identities = 133/147 (90%), Positives = 140/147 (95%)
Frame = -2
Query: 441 EIIVRQVTSKVLVSEDGMSNVFLPGELIGLLRAERVGRALDEAISYRAILLGITRTSLNT 262
EIIVRQVTSKVLVSEDGMSNVFLPGELIGLLRAER GRALDEAI YRAILLGITR SLNT
Sbjct: 1177 EIIVRQVTSKVLVSEDGMSNVFLPGELIGLLRAERAGRALDEAICYRAILLGITRASLNT 1236
Query: 261 QSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFKKLVHHSSKDKNF 82
QSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFKKLVH S +DKN
Sbjct: 1237 QSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFKKLVHRSRQDKNI 1296
Query: 81 YLEIKRKNLFDLEIKDLLLHHRELFCS 1
+LEIK+KNLF+LE++D+LLHHRE FCS
Sbjct: 1297 HLEIKKKNLFELEMRDILLHHREFFCS 1323
>gb|AEX94810.1| RNA polymerase beta' subunit (chloroplast) [Amaryllis belladonna]
Length = 1387
Score = 261 bits (668), Expect = 5e-68
Identities = 133/147 (90%), Positives = 140/147 (95%)
Frame = -2
Query: 441 EIIVRQVTSKVLVSEDGMSNVFLPGELIGLLRAERVGRALDEAISYRAILLGITRTSLNT 262
EIIVRQVTSKVLVSEDGMSNVFLPGELIGLLRAER GRALDEAI YRAILLGITR SLNT
Sbjct: 1221 EIIVRQVTSKVLVSEDGMSNVFLPGELIGLLRAERAGRALDEAICYRAILLGITRASLNT 1280
Query: 261 QSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFKKLVHHSSKDKNF 82
QSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFKKLVH S +DKN
Sbjct: 1281 QSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFKKLVHRSRQDKNI 1340
Query: 81 YLEIKRKNLFDLEIKDLLLHHRELFCS 1
+LEIK+KNLF+LE++D+LLHHRE FCS
Sbjct: 1341 HLEIKKKNLFELEMRDILLHHREFFCS 1367
>gb|AEX94806.1| RNA polymerase beta' subunit (chloroplast) [Polianthes sp. Pires
2011-05]
Length = 1384
Score = 261 bits (668), Expect = 5e-68
Identities = 133/147 (90%), Positives = 140/147 (95%)
Frame = -2
Query: 441 EIIVRQVTSKVLVSEDGMSNVFLPGELIGLLRAERVGRALDEAISYRAILLGITRTSLNT 262
EIIVRQVTSKVLVSEDGMSNVFLPGELIGLLRAER GRALDEAI YRAILLGITR SLNT
Sbjct: 1218 EIIVRQVTSKVLVSEDGMSNVFLPGELIGLLRAERAGRALDEAICYRAILLGITRASLNT 1277
Query: 261 QSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFKKLVHHSSKDKNF 82
QSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFKKLVH S +DKN
Sbjct: 1278 QSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFKKLVHRSRQDKNI 1337
Query: 81 YLEIKRKNLFDLEIKDLLLHHRELFCS 1
+LEIK+KNLF+LE++D+LLHHRE FCS
Sbjct: 1338 HLEIKKKNLFELEMRDILLHHREFFCS 1364
>gb|AEX94805.1| RNA polymerase beta' subunit (chloroplast) [Manfreda virginica]
Length = 1384
Score = 261 bits (668), Expect = 5e-68
Identities = 133/147 (90%), Positives = 140/147 (95%)
Frame = -2
Query: 441 EIIVRQVTSKVLVSEDGMSNVFLPGELIGLLRAERVGRALDEAISYRAILLGITRTSLNT 262
EIIVRQVTSKVLVSEDGMSNVFLPGELIGLLRAER GRALDEAI YRAILLGITR SLNT
Sbjct: 1218 EIIVRQVTSKVLVSEDGMSNVFLPGELIGLLRAERAGRALDEAICYRAILLGITRASLNT 1277
Query: 261 QSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFKKLVHHSSKDKNF 82
QSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFKKLVH S +DKN
Sbjct: 1278 QSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFKKLVHRSRQDKNI 1337
Query: 81 YLEIKRKNLFDLEIKDLLLHHRELFCS 1
+LEIK+KNLF+LE++D+LLHHRE FCS
Sbjct: 1338 HLEIKKKNLFELEMRDILLHHREFFCS 1364
>gb|AEX94804.1| RNA polymerase beta' subunit (chloroplast) [Hosta ventricosa]
Length = 1384
Score = 261 bits (668), Expect = 5e-68
Identities = 133/147 (90%), Positives = 140/147 (95%)
Frame = -2
Query: 441 EIIVRQVTSKVLVSEDGMSNVFLPGELIGLLRAERVGRALDEAISYRAILLGITRTSLNT 262
EIIVRQVTSKVLVSEDGMSNVFLPGELIGLLRAER GRALDEAI YRAILLGITR SLNT
Sbjct: 1218 EIIVRQVTSKVLVSEDGMSNVFLPGELIGLLRAERAGRALDEAICYRAILLGITRASLNT 1277
Query: 261 QSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFKKLVHHSSKDKNF 82
QSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFKKLVH S +DKN
Sbjct: 1278 QSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFKKLVHRSRQDKNI 1337
Query: 81 YLEIKRKNLFDLEIKDLLLHHRELFCS 1
+LEIK+KNLF+LE++D+LLHHRE FCS
Sbjct: 1338 HLEIKKKNLFELEMRDILLHHREFFCS 1364
>ref|YP_003540921.1| DNA-directed RNA polymerase beta' chain [Phoenix dactylifera]
gi|290790908|gb|ADD63163.1| DNA-directed RNA polymerase
beta' chain (chloroplast) [Phoenix dactylifera]
gi|294620567|gb|ADF28136.1| DNA-directed RNA polymerase
beta' chain (chloroplast) [Phoenix dactylifera]
Length = 1381
Score = 261 bits (668), Expect = 5e-68
Identities = 134/147 (91%), Positives = 140/147 (95%)
Frame = -2
Query: 441 EIIVRQVTSKVLVSEDGMSNVFLPGELIGLLRAERVGRALDEAISYRAILLGITRTSLNT 262
EIIVRQVTSKVLVSEDGMSNVFLPGELIG LRAER GRALDEAI YRAILLGITR SLNT
Sbjct: 1210 EIIVRQVTSKVLVSEDGMSNVFLPGELIGFLRAERAGRALDEAICYRAILLGITRASLNT 1269
Query: 261 QSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFKKLVHHSSKDKNF 82
QSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGF+KLVH S +DKN
Sbjct: 1270 QSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFQKLVHPSRQDKNI 1329
Query: 81 YLEIKRKNLFDLEIKDLLLHHRELFCS 1
+LEIKRKNLF+LEI+D+LLHHRELFCS
Sbjct: 1330 HLEIKRKNLFELEIRDILLHHRELFCS 1356
>gb|AHI87517.1| RNA polymerase beta subunit (chloroplast) [Chionographis japonica]
Length = 1382
Score = 261 bits (667), Expect = 7e-68
Identities = 132/147 (89%), Positives = 140/147 (95%)
Frame = -2
Query: 441 EIIVRQVTSKVLVSEDGMSNVFLPGELIGLLRAERVGRALDEAISYRAILLGITRTSLNT 262
EIIVRQ+TSKVLV EDGMSNVF PGELIG LRAER GRALDEAI YRAILLGITRTSLNT
Sbjct: 1216 EIIVRQITSKVLVLEDGMSNVFSPGELIGFLRAERAGRALDEAIGYRAILLGITRTSLNT 1275
Query: 261 QSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFKKLVHHSSKDKNF 82
QSFISEASFQETARVL+KAALRGRIDWLKGLKENVVLGGIIPVGTGFKKLVH+S +DKN
Sbjct: 1276 QSFISEASFQETARVLSKAALRGRIDWLKGLKENVVLGGIIPVGTGFKKLVHNSRQDKNI 1335
Query: 81 YLEIKRKNLFDLEIKDLLLHHRELFCS 1
YLEIKRKNLF+LE++D+LLHHRELFCS
Sbjct: 1336 YLEIKRKNLFELEMRDILLHHRELFCS 1362