BLASTX nr result
ID: Zingiber23_contig00054304
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00054304
(268 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006493538.1| PREDICTED: uncharacterized protein LOC102629... 74 4e-15
gb|EXB75595.1| Retrovirus-related Pol polyprotein from transposo... 66 3e-13
emb|CAN66873.1| hypothetical protein VITISV_021427 [Vitis vinifera] 70 2e-12
emb|CAN72993.1| hypothetical protein VITISV_002698 [Vitis vinifera] 70 2e-12
ref|XP_002263348.2| PREDICTED: wall-associated receptor kinase 2... 70 2e-12
emb|CAN62884.1| hypothetical protein VITISV_039744 [Vitis vinifera] 70 2e-12
emb|CAN78666.1| hypothetical protein VITISV_032507 [Vitis vinifera] 70 2e-12
emb|CAN66959.1| hypothetical protein VITISV_013138 [Vitis vinifera] 70 2e-12
emb|CAN66710.1| hypothetical protein VITISV_006397 [Vitis vinifera] 67 2e-11
emb|CAN69855.1| hypothetical protein VITISV_041230 [Vitis vinifera] 67 5e-11
gb|AAP94586.1| putative retrotransposon RIRE1 poly protein [Zea ... 55 4e-10
gb|ABA98885.1| retrotransposon protein, putative, Ty1-copia subc... 59 7e-10
gb|ABW81017.1| gag-pol polymerase [Arabidopsis lyrata subsp. lyr... 59 9e-10
gb|AAK70407.1|AF369930_2 pol polyprotein [Citrus x paradisi] 62 9e-10
gb|ABA98785.1| retrotransposon protein, putative, Ty1-copia subc... 58 1e-09
gb|AAM22635.1|AF434192_2 Gag and Pol [Zea mays] 59 1e-09
gb|ABG66192.1| retrotransposon protein, putative, Ty1-copia subc... 57 2e-09
gb|ABA99813.1| retrotransposon protein, putative, Ty1-copia subc... 57 2e-09
gb|ABF99156.1| retrotransposon protein, putative, Ty1-copia subc... 57 2e-09
gb|AAM19019.1|AC084748_9 putative polyprotein [Oryza sativa Japo... 57 2e-09
>ref|XP_006493538.1| PREDICTED: uncharacterized protein LOC102629831 [Citrus sinensis]
Length = 486
Score = 73.6 bits (179), Expect(2) = 4e-15
Identities = 30/57 (52%), Positives = 42/57 (73%)
Frame = -2
Query: 258 DWWYDSDASVHVCNEKSLFKNYEFAANEENVLMGNHDTIIVLGKGTIEMQFTSGKKM 88
DWW DS A++HVCN+K F +Y+ + VLMGN++ +IV GKG +E+ FTSGKK+
Sbjct: 152 DWWLDSGATIHVCNDKKFFLSYKEETEGQMVLMGNNNPVIVAGKGVVEINFTSGKKV 208
Score = 33.1 bits (74), Expect(2) = 4e-15
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = -1
Query: 88 DLIHVPDMRKNLIFTSLLCQRGLK 17
++ HVP +RKNLI S +C+ GLK
Sbjct: 212 NVFHVPSVRKNLISASCMCKHGLK 235
>gb|EXB75595.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Morus
notabilis]
Length = 440
Score = 65.9 bits (159), Expect(2) = 3e-13
Identities = 25/58 (43%), Positives = 41/58 (70%)
Frame = -2
Query: 261 ADWWYDSDASVHVCNEKSLFKNYEFAANEENVLMGNHDTIIVLGKGTIEMQFTSGKKM 88
+DWW DS ++HVCN+K++F +Y+ + VLM ++D +V G+G +E+ FTS KK+
Sbjct: 163 SDWWLDSSVTIHVCNDKTMFLSYKVEKEGQTVLMRSNDAAMVAGRGVVEINFTSEKKL 220
Score = 34.3 bits (77), Expect(2) = 3e-13
Identities = 15/27 (55%), Positives = 21/27 (77%)
Frame = -1
Query: 97 KEDDLIHVPDMRKNLIFTSLLCQRGLK 17
K+ L +VPD+RKNL+ SL+C+ GLK
Sbjct: 218 KKLTLNNVPDIRKNLVSASLMCKNGLK 244
>emb|CAN66873.1| hypothetical protein VITISV_021427 [Vitis vinifera]
Length = 1473
Score = 70.5 bits (171), Expect(2) = 2e-12
Identities = 33/56 (58%), Positives = 41/56 (73%)
Frame = -2
Query: 255 WWYDSDASVHVCNEKSLFKNYEFAANEENVLMGNHDTIIVLGKGTIEMQFTSGKKM 88
WWYD+ A+VHV +KSLFK +E A ++ V MGN VLGKGTIE+ FTSGKK+
Sbjct: 307 WWYDTCATVHVTYDKSLFKTFEDAKGDQEVQMGNEGKSKVLGKGTIEVVFTSGKKV 362
Score = 27.3 bits (59), Expect(2) = 2e-12
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 88 DLIHVPDMRKNLIFTSLLCQRGLK 17
++++VPDM KNL+ LL + G+K
Sbjct: 366 NVLYVPDMNKNLVSGDLLGKPGIK 389
>emb|CAN72993.1| hypothetical protein VITISV_002698 [Vitis vinifera]
Length = 1209
Score = 70.5 bits (171), Expect(2) = 2e-12
Identities = 33/56 (58%), Positives = 41/56 (73%)
Frame = -2
Query: 255 WWYDSDASVHVCNEKSLFKNYEFAANEENVLMGNHDTIIVLGKGTIEMQFTSGKKM 88
WWYD+ A+VHV +KSLFK +E A ++ V MGN VLGKGTIE+ FTSGKK+
Sbjct: 207 WWYDTCATVHVTYDKSLFKTFEBAKGDQEVQMGNEGRSKVLGKGTIEVVFTSGKKV 262
Score = 27.3 bits (59), Expect(2) = 2e-12
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 88 DLIHVPDMRKNLIFTSLLCQRGLK 17
++++VPDM KNL+ LL + G+K
Sbjct: 266 NVLYVPDMNKNLVSGDLLGKPGIK 289
>ref|XP_002263348.2| PREDICTED: wall-associated receptor kinase 2-like [Vitis vinifera]
Length = 1182
Score = 70.5 bits (171), Expect(2) = 2e-12
Identities = 33/56 (58%), Positives = 41/56 (73%)
Frame = -2
Query: 255 WWYDSDASVHVCNEKSLFKNYEFAANEENVLMGNHDTIIVLGKGTIEMQFTSGKKM 88
WWYD+ A+VHV +KSLFK +E A ++ V MGN VLGKGTIE+ FTSGKK+
Sbjct: 299 WWYDTCATVHVTYDKSLFKTFEDAKGDQEVQMGNEGRSKVLGKGTIEVVFTSGKKV 354
Score = 27.3 bits (59), Expect(2) = 2e-12
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 88 DLIHVPDMRKNLIFTSLLCQRGLK 17
++++VPDM KNL+ LL + G+K
Sbjct: 358 NVLYVPDMNKNLVSGDLLGKPGIK 381
>emb|CAN62884.1| hypothetical protein VITISV_039744 [Vitis vinifera]
Length = 1136
Score = 70.5 bits (171), Expect(2) = 2e-12
Identities = 33/56 (58%), Positives = 41/56 (73%)
Frame = -2
Query: 255 WWYDSDASVHVCNEKSLFKNYEFAANEENVLMGNHDTIIVLGKGTIEMQFTSGKKM 88
WWYD+ A+VHV +KSLFK +E A ++ V MGN VLGKGTIE+ FTSGKK+
Sbjct: 339 WWYDTCATVHVTYDKSLFKTFEDAKGDQEVQMGNEGKSKVLGKGTIEVVFTSGKKV 394
Score = 27.3 bits (59), Expect(2) = 2e-12
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 88 DLIHVPDMRKNLIFTSLLCQRGLK 17
++++VPDM KNL+ LL + G+K
Sbjct: 398 NVLYVPDMNKNLVSGDLLGKPGIK 421
>emb|CAN78666.1| hypothetical protein VITISV_032507 [Vitis vinifera]
Length = 804
Score = 70.5 bits (171), Expect(2) = 2e-12
Identities = 33/56 (58%), Positives = 41/56 (73%)
Frame = -2
Query: 255 WWYDSDASVHVCNEKSLFKNYEFAANEENVLMGNHDTIIVLGKGTIEMQFTSGKKM 88
WWYD+ A+VHV +KSLFK +E A ++ V MGN VLGKGTIE+ FTSGKK+
Sbjct: 307 WWYDTCATVHVTYDKSLFKTFEDAKGDQEVQMGNEGKSKVLGKGTIEVVFTSGKKV 362
Score = 27.3 bits (59), Expect(2) = 2e-12
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 88 DLIHVPDMRKNLIFTSLLCQRGLK 17
++++VPDM KNL+ LL + G+K
Sbjct: 366 NVLYVPDMNKNLVSGDLLGKPGIK 389
>emb|CAN66959.1| hypothetical protein VITISV_013138 [Vitis vinifera]
Length = 1234
Score = 70.1 bits (170), Expect(2) = 2e-12
Identities = 33/56 (58%), Positives = 41/56 (73%)
Frame = -2
Query: 255 WWYDSDASVHVCNEKSLFKNYEFAANEENVLMGNHDTIIVLGKGTIEMQFTSGKKM 88
WWYD+ A+VHV +KSLFK +E A ++ V MGN VLGKGTIE+ FTSGKK+
Sbjct: 307 WWYDTCATVHVTYDKSLFKTFEDAKGBQEVQMGNEGKSKVLGKGTIEVVFTSGKKV 362
Score = 27.3 bits (59), Expect(2) = 2e-12
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 88 DLIHVPDMRKNLIFTSLLCQRGLK 17
++++VPDM KNL+ LL + G+K
Sbjct: 366 NVLYVPDMNKNLVSGDLLGKPGIK 389
>emb|CAN66710.1| hypothetical protein VITISV_006397 [Vitis vinifera]
Length = 1105
Score = 67.0 bits (162), Expect(2) = 2e-11
Identities = 31/56 (55%), Positives = 41/56 (73%)
Frame = -2
Query: 255 WWYDSDASVHVCNEKSLFKNYEFAANEENVLMGNHDTIIVLGKGTIEMQFTSGKKM 88
WWYD+ A+V+V +KSLFK +E A ++ V MGN VLGKGTIE+ FTSGK++
Sbjct: 100 WWYDTCATVYVTYDKSLFKTFEDAKGDQEVQMGNEGGSKVLGKGTIEVAFTSGKRV 155
Score = 27.3 bits (59), Expect(2) = 2e-11
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 88 DLIHVPDMRKNLIFTSLLCQRGLK 17
++++VPDM KNL+ LL + G+K
Sbjct: 159 NVLYVPDMNKNLVSGDLLGKPGIK 182
>emb|CAN69855.1| hypothetical protein VITISV_041230 [Vitis vinifera]
Length = 1236
Score = 67.0 bits (162), Expect(2) = 5e-11
Identities = 31/56 (55%), Positives = 39/56 (69%)
Frame = -2
Query: 255 WWYDSDASVHVCNEKSLFKNYEFAANEENVLMGNHDTIIVLGKGTIEMQFTSGKKM 88
WWYD+ A++HV KS FK +E A ++ V MGN VLGKGTIE+ FTSGKK+
Sbjct: 259 WWYDTCATIHVTYYKSXFKTFEDAKGDQEVQMGNEGRSKVLGKGTIEVAFTSGKKV 314
Score = 25.8 bits (55), Expect(2) = 5e-11
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = -1
Query: 88 DLIHVPDMRKNLIFTSLLCQRGLK 17
++++VPDM KNL+ L + G+K
Sbjct: 318 NVLYVPDMNKNLVSGDFLGKPGIK 341
>gb|AAP94586.1| putative retrotransposon RIRE1 poly protein [Zea mays]
Length = 1309
Score = 55.1 bits (131), Expect(2) = 4e-10
Identities = 24/58 (41%), Positives = 37/58 (63%)
Frame = -2
Query: 258 DWWYDSDASVHVCNEKSLFKNYEFAANEENVLMGNHDTIIVLGKGTIEMQFTSGKKMI 85
DWW DS A+VH+C ++S+F +++ N VLMGN V G G + ++ TSGK ++
Sbjct: 316 DWWMDSGATVHICADRSMFSSFQ-GFNSAPVLMGNGVPAAVRGTGQVYLKLTSGKTLV 372
Score = 34.7 bits (78), Expect(2) = 4e-10
Identities = 14/24 (58%), Positives = 20/24 (83%)
Frame = -1
Query: 88 DLIHVPDMRKNLIFTSLLCQRGLK 17
D+++VP M +NLI SLLC++GLK
Sbjct: 375 DVLYVPSMSRNLISVSLLCRQGLK 398
>gb|ABA98885.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1452
Score = 58.9 bits (141), Expect(2) = 7e-10
Identities = 25/55 (45%), Positives = 38/55 (69%)
Frame = -2
Query: 258 DWWYDSDASVHVCNEKSLFKNYEFAANEENVLMGNHDTIIVLGKGTIEMQFTSGK 94
DWW D+ A++HVC + SLF +Y+ ++LMGN +V G GT++++FTSGK
Sbjct: 452 DWWVDTGANIHVCADISLFSSYQ-VGRGSSLLMGNGSLAVVHGVGTVDLKFTSGK 505
Score = 30.0 bits (66), Expect(2) = 7e-10
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = -1
Query: 79 HVPDMRKNLIFTSLLCQRGLK 17
HVP ++KNL+ SLLC+ G +
Sbjct: 514 HVPSIKKNLVSGSLLCREGFR 534
>gb|ABW81017.1| gag-pol polymerase [Arabidopsis lyrata subsp. lyrata]
Length = 1034
Score = 58.9 bits (141), Expect(2) = 9e-10
Identities = 23/56 (41%), Positives = 36/56 (64%)
Frame = -2
Query: 255 WWYDSDASVHVCNEKSLFKNYEFAANEENVLMGNHDTIIVLGKGTIEMQFTSGKKM 88
WW DS A++HVC ++ FK YE + + MGN T +LG+G + ++F+SGK +
Sbjct: 267 WWIDSGATIHVCKDRGWFKTYEPVQDGSVLYMGNESTAPILGRGKVVLEFSSGKTL 322
Score = 29.6 bits (65), Expect(2) = 9e-10
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = -1
Query: 91 DDLIHVPDMRKNLIFTSLLCQRGLK 17
+D+IHVP +RKNL+ S+L + G K
Sbjct: 325 NDVIHVPGIRKNLVSGSVLNKCGFK 349
>gb|AAK70407.1|AF369930_2 pol polyprotein [Citrus x paradisi]
Length = 701
Score = 61.6 bits (148), Expect(2) = 9e-10
Identities = 25/60 (41%), Positives = 41/60 (68%)
Frame = -2
Query: 267 NFADWWYDSDASVHVCNEKSLFKNYEFAANEENVLMGNHDTIIVLGKGTIEMQFTSGKKM 88
N +WW D+ A+ HVC++K LF ++E A+N E + MGN T + G+G + ++ TSGK++
Sbjct: 321 NPREWWIDTGATRHVCSDKGLFTSFEAASNREKLFMGNSATSEIEGQGKVALKMTSGKEL 380
Score = 26.9 bits (58), Expect(2) = 9e-10
Identities = 10/25 (40%), Positives = 20/25 (80%)
Frame = -1
Query: 91 DDLIHVPDMRKNLIFTSLLCQRGLK 17
+++++VP++RKNL+ SLL + G +
Sbjct: 383 NNVLYVPEIRKNLVSGSLLNKHGFR 407
>gb|ABA98785.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1303
Score = 58.2 bits (139), Expect(2) = 1e-09
Identities = 25/55 (45%), Positives = 37/55 (67%)
Frame = -2
Query: 258 DWWYDSDASVHVCNEKSLFKNYEFAANEENVLMGNHDTIIVLGKGTIEMQFTSGK 94
DWW D+ A++HVC + SLF +Y+ ++LMGN V G GT++++FTSGK
Sbjct: 409 DWWVDTGANIHVCADISLFSSYQ-VGRGSSLLMGNESLAAVHGVGTVDLKFTSGK 462
Score = 30.0 bits (66), Expect(2) = 1e-09
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = -1
Query: 79 HVPDMRKNLIFTSLLCQRGLK 17
HVP ++KNL+ SLLC+ G +
Sbjct: 471 HVPSIKKNLVSGSLLCREGFR 491
>gb|AAM22635.1|AF434192_2 Gag and Pol [Zea mays]
Length = 1264
Score = 59.3 bits (142), Expect(2) = 1e-09
Identities = 26/54 (48%), Positives = 39/54 (72%)
Frame = -2
Query: 255 WWYDSDASVHVCNEKSLFKNYEFAANEENVLMGNHDTIIVLGKGTIEMQFTSGK 94
WW D+ A+VHVC++ +LF +Y+ A + +VLMGN V G GT++++FTSGK
Sbjct: 262 WWLDTGANVHVCSDINLFSSYQ-GARDSSVLMGNGSHASVHGTGTVDLKFTSGK 314
Score = 28.5 bits (62), Expect(2) = 1e-09
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -1
Query: 79 HVPDMRKNLIFTSLLCQRGLK 17
HVP + KNL+ +LLC+ G K
Sbjct: 323 HVPSIHKNLVSGTLLCRDGFK 343
>gb|ABG66192.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1457
Score = 57.4 bits (137), Expect(2) = 2e-09
Identities = 25/55 (45%), Positives = 37/55 (67%)
Frame = -2
Query: 258 DWWYDSDASVHVCNEKSLFKNYEFAANEENVLMGNHDTIIVLGKGTIEMQFTSGK 94
DWW D+ A++HVC + SLF +Y+ ++LMGN V G GT++++FTSGK
Sbjct: 453 DWWVDTGANIHVCADISLFSSYQ-VGRGSSLLMGNGSLAAVHGVGTVDLKFTSGK 506
Score = 30.0 bits (66), Expect(2) = 2e-09
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = -1
Query: 79 HVPDMRKNLIFTSLLCQRGLK 17
HVP ++KNL+ SLLC+ G +
Sbjct: 515 HVPSIKKNLVSGSLLCREGFR 535
>gb|ABA99813.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1448
Score = 57.4 bits (137), Expect(2) = 2e-09
Identities = 25/55 (45%), Positives = 37/55 (67%)
Frame = -2
Query: 258 DWWYDSDASVHVCNEKSLFKNYEFAANEENVLMGNHDTIIVLGKGTIEMQFTSGK 94
DWW D+ A++HVC + SLF +Y+ ++LMGN V G GT++++FTSGK
Sbjct: 444 DWWVDTGANIHVCADISLFSSYQ-VGRGSSLLMGNGSLAAVHGVGTVDLKFTSGK 497
Score = 30.0 bits (66), Expect(2) = 2e-09
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = -1
Query: 79 HVPDMRKNLIFTSLLCQRGLK 17
HVP ++KNL+ SLLC+ G +
Sbjct: 506 HVPSIKKNLVSGSLLCREGFR 526
>gb|ABF99156.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1413
Score = 57.4 bits (137), Expect(2) = 2e-09
Identities = 25/55 (45%), Positives = 37/55 (67%)
Frame = -2
Query: 258 DWWYDSDASVHVCNEKSLFKNYEFAANEENVLMGNHDTIIVLGKGTIEMQFTSGK 94
DWW D+ A++HVC + SLF +Y+ ++LMGN V G GT++++FTSGK
Sbjct: 409 DWWVDTGANIHVCADISLFSSYQ-VGRGSSLLMGNGSLAAVHGVGTVDLKFTSGK 462
Score = 30.0 bits (66), Expect(2) = 2e-09
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = -1
Query: 79 HVPDMRKNLIFTSLLCQRGLK 17
HVP ++KNL+ SLLC+ G +
Sbjct: 471 HVPSIKKNLVSGSLLCREGFR 491
>gb|AAM19019.1|AC084748_9 putative polyprotein [Oryza sativa Japonica Group]
Length = 1394
Score = 57.4 bits (137), Expect(2) = 2e-09
Identities = 25/55 (45%), Positives = 37/55 (67%)
Frame = -2
Query: 258 DWWYDSDASVHVCNEKSLFKNYEFAANEENVLMGNHDTIIVLGKGTIEMQFTSGK 94
DWW D+ A++HVC + SLF +Y+ ++LMGN V G GT++++FTSGK
Sbjct: 390 DWWVDTGANIHVCADISLFSSYQ-VGRGSSLLMGNGSLAAVHGVGTVDLKFTSGK 443
Score = 30.0 bits (66), Expect(2) = 2e-09
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = -1
Query: 79 HVPDMRKNLIFTSLLCQRGLK 17
HVP ++KNL+ SLLC+ G +
Sbjct: 452 HVPSIKKNLVSGSLLCREGFR 472