BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00054294
         (248 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530092.1| pentatricopeptide repeat-containing protein,...   104   1e-20
ref|XP_004298070.1| PREDICTED: pentatricopeptide repeat-containi...   104   1e-20
ref|XP_004502560.1| PREDICTED: pentatricopeptide repeat-containi...   103   2e-20
ref|XP_002302207.1| pentatricopeptide repeat-containing family p...   100   3e-19
gb|ESW09498.1| hypothetical protein PHAVU_009G132500g [Phaseolus...    99   8e-19
gb|EOY16503.1| Tetratricopeptide repeat (TPR)-like superfamily p...    99   8e-19
emb|CBI19924.3| unnamed protein product [Vitis vinifera]               99   8e-19
ref|XP_002279206.1| PREDICTED: pentatricopeptide repeat-containi...    99   8e-19
ref|XP_006853063.1| hypothetical protein AMTR_s00038p00071780 [A...    98   1e-18
ref|XP_006434326.1| hypothetical protein CICLE_v10000445mg [Citr...    96   5e-18
ref|XP_006473032.1| PREDICTED: pentatricopeptide repeat-containi...    96   6e-18
ref|XP_002876981.1| pentatricopeptide repeat-containing protein ...    92   5e-17
ref|XP_003522563.1| PREDICTED: pentatricopeptide repeat-containi...    92   9e-17
ref|NP_189286.1| pentatricopeptide repeat-containing protein [Ar...    91   1e-16
ref|XP_006395548.1| hypothetical protein EUTSA_v10003744mg [Eutr...    90   3e-16
ref|XP_006290673.1| hypothetical protein CARUB_v10016766mg [Caps...    89   5e-16
ref|XP_004144297.1| PREDICTED: pentatricopeptide repeat-containi...    88   1e-15
ref|XP_004237749.1| PREDICTED: pentatricopeptide repeat-containi...    84   3e-14
ref|XP_006356336.1| PREDICTED: pentatricopeptide repeat-containi...    83   3e-14
ref|NP_001052854.1| Os04g0436800 [Oryza sativa Japonica Group] g...    81   2e-13

>ref|XP_002530092.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223530403|gb|EEF32291.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 718

 Score =  104 bits (260), Expect = 1e-20
 Identities = 47/78 (60%), Positives = 60/78 (76%)
 Frame = +2

Query: 8   EAEKIFEEMPERNVISWNALLAGYIRFFCWDKASDFFCRMWRETGKLDLVSLGLQLNACA 187
           EA ++FE+MPE +V+SWNA+LAGYIR   W++A DF C M R T  +D ++LGL LN CA
Sbjct: 343 EARELFEKMPEWSVVSWNAMLAGYIRSLQWEEALDFVCLMRRTTEDIDHITLGLLLNVCA 402

Query: 188 GISDLDRGKQIHGFAYRH 241
           GISD++ GKQ HGF YRH
Sbjct: 403 GISDVEMGKQAHGFIYRH 420


>ref|XP_004298070.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g26540-like [Fragaria vesca subsp. vesca]
          Length = 693

 Score =  104 bits (259), Expect = 1e-20
 Identities = 46/78 (58%), Positives = 60/78 (76%)
 Frame = +2

Query: 8   EAEKIFEEMPERNVISWNALLAGYIRFFCWDKASDFFCRMWRETGKLDLVSLGLQLNACA 187
           +A  +F+EMPERNVISWNA+LAGY R+F W++A +F   M   T  +D V+LGL LN CA
Sbjct: 346 KARALFDEMPERNVISWNAMLAGYTRYFQWEEALNFIFLMQNTTRDIDQVTLGLILNVCA 405

Query: 188 GISDLDRGKQIHGFAYRH 241
           G+SD++ GKQ+HGF YRH
Sbjct: 406 GLSDVEMGKQVHGFIYRH 423


>ref|XP_004502560.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g26540-like [Cicer arietinum]
          Length = 682

 Score =  103 bits (258), Expect = 2e-20
 Identities = 47/78 (60%), Positives = 57/78 (73%)
 Frame = +2

Query: 8   EAEKIFEEMPERNVISWNALLAGYIRFFCWDKASDFFCRMWRETGKLDLVSLGLQLNACA 187
           EA K+F+EMPERNVISWNA+LAGY RFF W +A DF C M      +D V+L L LN  A
Sbjct: 330 EARKLFDEMPERNVISWNAMLAGYTRFFKWSEALDFVCLMLENVMDVDHVTLSLMLNVSA 389

Query: 188 GISDLDRGKQIHGFAYRH 241
           G+SD + GKQ+HG+ YRH
Sbjct: 390 GLSDHEMGKQLHGYVYRH 407


>ref|XP_002302207.1| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|222843933|gb|EEE81480.1|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 709

 Score =  100 bits (248), Expect = 3e-19
 Identities = 44/78 (56%), Positives = 59/78 (75%)
 Frame = +2

Query: 8   EAEKIFEEMPERNVISWNALLAGYIRFFCWDKASDFFCRMWRETGKLDLVSLGLQLNACA 187
           EA ++F+EMPERN++S+NALLAGYIR   W++A DF   M R T  +D ++  L LN C+
Sbjct: 343 EARELFDEMPERNMVSYNALLAGYIRSLQWEEALDFVYLMCRTTENIDHITFQLMLNVCS 402

Query: 188 GISDLDRGKQIHGFAYRH 241
           G+SD+D GKQ+HGF YRH
Sbjct: 403 GLSDVDMGKQVHGFIYRH 420


>gb|ESW09498.1| hypothetical protein PHAVU_009G132500g [Phaseolus vulgaris]
          Length = 693

 Score = 98.6 bits (244), Expect = 8e-19
 Identities = 46/78 (58%), Positives = 57/78 (73%)
 Frame = +2

Query: 8   EAEKIFEEMPERNVISWNALLAGYIRFFCWDKASDFFCRMWRETGKLDLVSLGLQLNACA 187
           EA K+F++MPERNV+SWNA+LAGY+R F W +A DF   M      +D V+LGL LN  A
Sbjct: 344 EARKLFDKMPERNVVSWNAMLAGYVRCFEWSEALDFMYLMLDRIKYVDHVTLGLMLNISA 403

Query: 188 GISDLDRGKQIHGFAYRH 241
           GISD + GKQIHG+ YRH
Sbjct: 404 GISDHETGKQIHGYTYRH 421


>gb|EOY16503.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
           [Theobroma cacao]
          Length = 731

 Score = 98.6 bits (244), Expect = 8e-19
 Identities = 46/78 (58%), Positives = 57/78 (73%)
 Frame = +2

Query: 8   EAEKIFEEMPERNVISWNALLAGYIRFFCWDKASDFFCRMWRETGKLDLVSLGLQLNACA 187
           EA ++F  MPERNVISWNA+LAGY   F W+ A +F   M R T ++D V+L L LN CA
Sbjct: 366 EARELFNMMPERNVISWNAMLAGYTHLFQWEDALEFVFLMRRMTKEIDHVTLVLVLNVCA 425

Query: 188 GISDLDRGKQIHGFAYRH 241
           GISD++ GKQ+HGF YRH
Sbjct: 426 GISDVEMGKQVHGFIYRH 443


>emb|CBI19924.3| unnamed protein product [Vitis vinifera]
          Length = 912

 Score = 98.6 bits (244), Expect = 8e-19
 Identities = 44/78 (56%), Positives = 59/78 (75%)
 Frame = +2

Query: 8   EAEKIFEEMPERNVISWNALLAGYIRFFCWDKASDFFCRMWRETGKLDLVSLGLQLNACA 187
           EA  +F+EMPER+VISWNA+LAGY  F  W++A +F   M + T  +D V++GL LN CA
Sbjct: 346 EARVLFDEMPERSVISWNAMLAGYTHFCQWEEALEFVFLMRKATQDIDHVTVGLILNVCA 405

Query: 188 GISDLDRGKQIHGFAYRH 241
           G+SD++ GKQ+HGF YRH
Sbjct: 406 GLSDVESGKQVHGFIYRH 423



 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 29/80 (36%), Positives = 46/80 (57%)
 Frame = +2

Query: 2   VDEAEKIFEEMPERNVISWNALLAGYIRFFCWDKASDFFCRMWRETGKLDLVSLGLQLNA 181
           +D+A ++FEEMP+R+  SWNA++  Y +  C +KA   F RM R     + ++    L +
Sbjct: 111 LDDARELFEEMPQRDGGSWNAMITAYAQGGCAEKALWLFSRMNRLGIWANEITFASVLGS 170

Query: 182 CAGISDLDRGKQIHGFAYRH 241
           CA +  L   KQIHG   ++
Sbjct: 171 CATVLALFLSKQIHGLIVKY 190


>ref|XP_002279206.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26540
           [Vitis vinifera]
          Length = 711

 Score = 98.6 bits (244), Expect = 8e-19
 Identities = 44/78 (56%), Positives = 59/78 (75%)
 Frame = +2

Query: 8   EAEKIFEEMPERNVISWNALLAGYIRFFCWDKASDFFCRMWRETGKLDLVSLGLQLNACA 187
           EA  +F+EMPER+VISWNA+LAGY  F  W++A +F   M + T  +D V++GL LN CA
Sbjct: 346 EARVLFDEMPERSVISWNAMLAGYTHFCQWEEALEFVFLMRKATQDIDHVTVGLILNVCA 405

Query: 188 GISDLDRGKQIHGFAYRH 241
           G+SD++ GKQ+HGF YRH
Sbjct: 406 GLSDVESGKQVHGFIYRH 423



 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 29/80 (36%), Positives = 46/80 (57%)
 Frame = +2

Query: 2   VDEAEKIFEEMPERNVISWNALLAGYIRFFCWDKASDFFCRMWRETGKLDLVSLGLQLNA 181
           +D+A ++FEEMP+R+  SWNA++  Y +  C +KA   F RM R     + ++    L +
Sbjct: 111 LDDARELFEEMPQRDGGSWNAMITAYAQGGCAEKALWLFSRMNRLGIWANEITFASVLGS 170

Query: 182 CAGISDLDRGKQIHGFAYRH 241
           CA +  L   KQIHG   ++
Sbjct: 171 CATVLALFLSKQIHGLIVKY 190


>ref|XP_006853063.1| hypothetical protein AMTR_s00038p00071780 [Amborella trichopoda]
           gi|548856702|gb|ERN14530.1| hypothetical protein
           AMTR_s00038p00071780 [Amborella trichopoda]
          Length = 714

 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 42/79 (53%), Positives = 58/79 (73%)
 Frame = +2

Query: 5   DEAEKIFEEMPERNVISWNALLAGYIRFFCWDKASDFFCRMWRETGKLDLVSLGLQLNAC 184
           +EA   F+EMP+RNV+SWNA+L GY +   W++  DFF +M RE  ++D V+LGL LN C
Sbjct: 343 EEARNFFDEMPQRNVVSWNAMLVGYTQLCRWEEGLDFFSKMRREACEIDHVTLGLVLNIC 402

Query: 185 AGISDLDRGKQIHGFAYRH 241
           AG++DL+ GKQ+H F  RH
Sbjct: 403 AGLTDLELGKQVHAFVNRH 421


>ref|XP_006434326.1| hypothetical protein CICLE_v10000445mg [Citrus clementina]
           gi|557536448|gb|ESR47566.1| hypothetical protein
           CICLE_v10000445mg [Citrus clementina]
          Length = 706

 Score = 95.9 bits (237), Expect = 5e-18
 Identities = 43/81 (53%), Positives = 59/81 (72%)
 Frame = +2

Query: 2   VDEAEKIFEEMPERNVISWNALLAGYIRFFCWDKASDFFCRMWRETGKLDLVSLGLQLNA 181
           + EA ++F EMPERNVISWNA+LAGY R   W +A DF   M + T  +D V+LGL LN 
Sbjct: 339 IREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDQVTLGLILNV 398

Query: 182 CAGISDLDRGKQIHGFAYRHN 244
           CAG+S++  GK++HGF +R++
Sbjct: 399 CAGLSEIKMGKEVHGFIHRND 419


>ref|XP_006473032.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Citrus sinensis]
          Length = 1390

 Score = 95.5 bits (236), Expect = 6e-18
 Identities = 43/81 (53%), Positives = 59/81 (72%)
 Frame = +2

Query: 2   VDEAEKIFEEMPERNVISWNALLAGYIRFFCWDKASDFFCRMWRETGKLDLVSLGLQLNA 181
           + EA ++F EMPERNVISWNA+LAGY R   W +A DF   M + T  +D V+LGL LN 
Sbjct: 339 IREARELFNEMPERNVISWNAMLAGYTRSLLWKEALDFVFLMRKTTKDIDHVTLGLILNV 398

Query: 182 CAGISDLDRGKQIHGFAYRHN 244
           CAG+S++  GK++HGF +R++
Sbjct: 399 CAGLSEIKMGKEVHGFIHRND 419



 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 26/73 (35%), Positives = 46/73 (63%)
 Frame = +2

Query: 2    VDEAEKIFEEMPERNVISWNALLAGYIRFFCWDKASDFFCRMWRETGKLDLVSLGLQLNA 181
            +++A+ IF  MP +++ISWN+++ G  +     +A D FC M +   ++D  SL   ++A
Sbjct: 1095 IEDAKHIFRTMPNKSLISWNSMIVGLSQNGSPIEALDLFCNMNKLDLRMDKFSLASVISA 1154

Query: 182  CAGISDLDRGKQI 220
            CA IS L+ G+Q+
Sbjct: 1155 CANISSLELGEQV 1167


>ref|XP_002876981.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297322819|gb|EFH53240.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 693

 Score = 92.4 bits (228), Expect = 5e-17
 Identities = 42/78 (53%), Positives = 54/78 (69%)
 Frame = +2

Query: 8   EAEKIFEEMPERNVISWNALLAGYIRFFCWDKASDFFCRMWRETGKLDLVSLGLQLNACA 187
           EA ++F+ MPERN++SWNA+L GY+R   WD A DF   M +E   +D V+L   LN C+
Sbjct: 347 EARELFDLMPERNIVSWNAMLGGYVRAHEWDDALDFLTLMRKEIEDIDNVTLVWILNVCS 406

Query: 188 GISDLDRGKQIHGFAYRH 241
           GISD+  GKQ HGF YRH
Sbjct: 407 GISDVQMGKQAHGFIYRH 424


>ref|XP_003522563.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g26540-like [Glycine max]
          Length = 698

 Score = 91.7 bits (226), Expect = 9e-17
 Identities = 45/78 (57%), Positives = 54/78 (69%)
 Frame = +2

Query: 8   EAEKIFEEMPERNVISWNALLAGYIRFFCWDKASDFFCRMWRETGKLDLVSLGLQLNACA 187
           EA + F+EMPERNVISWNA+LAGY +   W KA DF   M      +D V+LGL LN  A
Sbjct: 349 EAREFFDEMPERNVISWNAMLAGYTQCSEWSKALDFVYLMLDVIKDVDHVTLGLLLNVSA 408

Query: 188 GISDLDRGKQIHGFAYRH 241
           GISD + GKQ+HG+ YRH
Sbjct: 409 GISDHEMGKQVHGYIYRH 426


>ref|NP_189286.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75273843|sp|Q9LRV2.1|PP256_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g26540 gi|9293933|dbj|BAB01836.1| selenium-binding
           protein-like [Arabidopsis thaliana]
           gi|332643655|gb|AEE77176.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 700

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 41/78 (52%), Positives = 54/78 (69%)
 Frame = +2

Query: 8   EAEKIFEEMPERNVISWNALLAGYIRFFCWDKASDFFCRMWRETGKLDLVSLGLQLNACA 187
           EA ++F+ MPERN++SWNA+L GY+    WD+A DF   M +E   +D V+L   LN C+
Sbjct: 347 EARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCS 406

Query: 188 GISDLDRGKQIHGFAYRH 241
           GISD+  GKQ HGF YRH
Sbjct: 407 GISDVQMGKQAHGFIYRH 424


>ref|XP_006395548.1| hypothetical protein EUTSA_v10003744mg [Eutrema salsugineum]
           gi|557092187|gb|ESQ32834.1| hypothetical protein
           EUTSA_v10003744mg [Eutrema salsugineum]
          Length = 690

 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 40/78 (51%), Positives = 55/78 (70%)
 Frame = +2

Query: 8   EAEKIFEEMPERNVISWNALLAGYIRFFCWDKASDFFCRMWRETGKLDLVSLGLQLNACA 187
           +A ++F+ MPERN+ISWNA+L GY+R   W++A DF   M +E   +D V+L   LN C+
Sbjct: 344 DARELFDLMPERNIISWNAMLGGYVRASEWEEALDFLTLMRKEIEDIDNVTLVWILNVCS 403

Query: 188 GISDLDRGKQIHGFAYRH 241
           G+SD+  GKQ HGF YRH
Sbjct: 404 GVSDVQMGKQAHGFIYRH 421


>ref|XP_006290673.1| hypothetical protein CARUB_v10016766mg [Capsella rubella]
           gi|565465522|ref|XP_006290674.1| hypothetical protein
           CARUB_v10016766mg [Capsella rubella]
           gi|482559380|gb|EOA23571.1| hypothetical protein
           CARUB_v10016766mg [Capsella rubella]
           gi|482559381|gb|EOA23572.1| hypothetical protein
           CARUB_v10016766mg [Capsella rubella]
          Length = 693

 Score = 89.4 bits (220), Expect = 5e-16
 Identities = 40/78 (51%), Positives = 54/78 (69%)
 Frame = +2

Query: 8   EAEKIFEEMPERNVISWNALLAGYIRFFCWDKASDFFCRMWRETGKLDLVSLGLQLNACA 187
           EA ++F+ MPERN++SWNA+L GY+R   W++A DF   M +E   +D V+L   LN C+
Sbjct: 347 EARELFDLMPERNIVSWNAMLGGYVRAHEWNEALDFLTLMRKEIEDIDNVTLVWILNVCS 406

Query: 188 GISDLDRGKQIHGFAYRH 241
           G SD+  GKQ HGF YRH
Sbjct: 407 GTSDVQMGKQAHGFIYRH 424


>ref|XP_004144297.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g26540-like [Cucumis sativus]
           gi|449521874|ref|XP_004167954.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g26540-like [Cucumis sativus]
          Length = 697

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 41/77 (53%), Positives = 53/77 (68%)
 Frame = +2

Query: 8   EAEKIFEEMPERNVISWNALLAGYIRFFCWDKASDFFCRMWRETGKLDLVSLGLQLNACA 187
           +A ++F EMPERNVISWNA+LAGYI    W++A +F   M      +D  +L L LN C 
Sbjct: 345 KARELFNEMPERNVISWNAMLAGYIHSSQWEEALEFVHLMRSSIKDIDRTTLCLILNVCT 404

Query: 188 GISDLDRGKQIHGFAYR 238
           G SD++RGKQ+HGF YR
Sbjct: 405 GSSDVERGKQVHGFVYR 421


>ref|XP_004237749.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g26540-like [Solanum lycopersicum]
          Length = 698

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 38/78 (48%), Positives = 52/78 (66%)
 Frame = +2

Query: 8   EAEKIFEEMPERNVISWNALLAGYIRFFCWDKASDFFCRMWRETGKLDLVSLGLQLNACA 187
           +A +IF+ MPER+V+SWNA+LAGY     WD+A +    M       D V++ L LN  A
Sbjct: 349 QAREIFDRMPERSVVSWNAMLAGYAHNSQWDEAMELINLMCNNMRDTDRVTVSLILNVSA 408

Query: 188 GISDLDRGKQIHGFAYRH 241
           G+SDL+ GKQ+HG+ YRH
Sbjct: 409 GLSDLELGKQVHGYMYRH 426


>ref|XP_006356336.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g26540-like [Solanum tuberosum]
          Length = 698

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 36/77 (46%), Positives = 52/77 (67%)
 Frame = +2

Query: 11  AEKIFEEMPERNVISWNALLAGYIRFFCWDKASDFFCRMWRETGKLDLVSLGLQLNACAG 190
           A ++F+ MPER+++SWNA+LAGY     WD+A +    M  +    D V++ L LN  AG
Sbjct: 350 ARELFDRMPERSIVSWNAMLAGYAHNSQWDEAMELIILMCNDMRDTDRVTVSLILNVSAG 409

Query: 191 ISDLDRGKQIHGFAYRH 241
           +SDL+ GKQ+HG+ YRH
Sbjct: 410 LSDLELGKQVHGYMYRH 426


>ref|NP_001052854.1| Os04g0436800 [Oryza sativa Japonica Group]
           gi|38344064|emb|CAD40816.2| OSJNBa0006B20.8 [Oryza
           sativa Japonica Group] gi|113564425|dbj|BAF14768.1|
           Os04g0436800 [Oryza sativa Japonica Group]
           gi|116310780|emb|CAH67572.1| H0315A08.2 [Oryza sativa
           Indica Group] gi|215704891|dbj|BAG94919.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|218194892|gb|EEC77319.1| hypothetical protein
           OsI_15984 [Oryza sativa Indica Group]
          Length = 717

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 35/79 (44%), Positives = 55/79 (69%)
 Frame = +2

Query: 2   VDEAEKIFEEMPERNVISWNALLAGYIRFFCWDKASDFFCRMWRETGKLDLVSLGLQLNA 181
           + +A+++FE M E N++SWNA+L GY+R      A   F +M +ET +LD V+LG  LNA
Sbjct: 336 ITDAKRVFEGMEEHNLVSWNAMLTGYVRSMDLTSALQLFQQMRQETKELDAVTLGCVLNA 395

Query: 182 CAGISDLDRGKQIHGFAYR 238
           C G+ DL +G+++H FA++
Sbjct: 396 CTGLLDLGKGEEVHTFAFK 414