BLASTX nr result

ID: Zingiber23_contig00054263 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00054263
         (387 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EAZ37525.1| hypothetical protein OsJ_21857 [Oryza sativa Japo...    54   5e-07
ref|XP_002271433.1| PREDICTED: F-box/kelch-repeat protein At1g15...    57   2e-06
gb|ACG25097.1| protein kinase Kelch repeat:Kelch [Zea mays] gi|4...    57   3e-06
gb|ESW22671.1| hypothetical protein PHAVU_005G172400g [Phaseolus...    56   4e-06
ref|XP_002271537.1| PREDICTED: F-box/kelch-repeat protein At1g80...    55   7e-06
gb|EEC72719.1| hypothetical protein OsI_06324 [Oryza sativa Indi...    55   7e-06
ref|NP_001057979.1| Os06g0594400 [Oryza sativa Japonica Group] g...    55   1e-05

>gb|EAZ37525.1| hypothetical protein OsJ_21857 [Oryza sativa Japonica Group]
          Length = 382

 Score = 53.9 bits (128), Expect(2) = 5e-07
 Identities = 42/132 (31%), Positives = 64/132 (48%), Gaps = 22/132 (16%)
 Frame = +1

Query: 1   LDSPSFYRIRRAAGLA-PRVVTLLFRGKLPHTV--------------GKFHLALYEPDTG 135
           ++SP++ R+R+A GLA P +  +  R +L                    + + L +P  G
Sbjct: 41  VESPAYNRLRKAEGLARPALALVQARRELAEAGPAADKQSSAGGVPGNSYRMVLLDPAEG 100

Query: 136 VFT----MRQLASNRPNFKKGIRIHAMVVGRE-LVVIGGWDVLENRSTAEVNIYDLLSGA 300
            +T    +   + + P F +   +   V GR+ LVV+GGWD      T  V +YD L+GA
Sbjct: 101 RWTPLPEVGGASGSLPLFCQVAAVDGGVEGRKRLVVVGGWDPETWAPTDSVLVYDFLTGA 160

Query: 301 WRPGA--PNPAP 330
           WR GA  P PAP
Sbjct: 161 WRRGAAMPGPAP 172



 Score = 25.4 bits (54), Expect(2) = 5e-07
 Identities = 13/23 (56%), Positives = 14/23 (60%)
 Frame = +3

Query: 315 AKPGSRADLLRVRLEGREGVRSR 383
           A PG    +LRVR   REGVR R
Sbjct: 166 AMPGPAPVVLRVRRRRREGVRRR 188


>ref|XP_002271433.1| PREDICTED: F-box/kelch-repeat protein At1g15670 [Vitis vinifera]
           gi|297743603|emb|CBI36470.3| unnamed protein product
           [Vitis vinifera]
          Length = 348

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 39/121 (32%), Positives = 59/121 (48%), Gaps = 8/121 (6%)
 Frame = +1

Query: 1   LDSPSFYRIRRAAGLAPRVVTLLFR------GKLPHTVGKFHLALYEPDTGVFTMRQLAS 162
           L  P F R R+AAG    ++ +         GK       + L LYEPD+G ++      
Sbjct: 39  LRHPDFLRHRKAAGFTTNIIVMAQSPPQTNTGKAIPPADSYGLTLYEPDSGSWSE---LP 95

Query: 163 NRPNFKKGIRIHAMVVG--RELVVIGGWDVLENRSTAEVNIYDLLSGAWRPGAPNPAPGR 336
             P   +G+ +H  +VG   +LVVIGG+D     S+  V +Y+++S  WR GA  P   R
Sbjct: 96  PLPGMNRGLPMHCGLVGVGLDLVVIGGYDPETWESSNAVFVYNVVSATWRRGADIPGVRR 155

Query: 337 T 339
           +
Sbjct: 156 S 156


>gb|ACG25097.1| protein kinase Kelch repeat:Kelch [Zea mays]
           gi|413943802|gb|AFW76451.1| protein kinase Kelch
           repeat:Kelch [Zea mays]
          Length = 383

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 45/135 (33%), Positives = 60/135 (44%), Gaps = 22/135 (16%)
 Frame = +1

Query: 1   LDSPSFYRIRRAAGLAPRVVTLLFRG---------------KLPHTVGKFHLALYEPDTG 135
           ++SP ++R RRA GLA  V+ L+                  K       + L L EP  G
Sbjct: 39  VESPDYHRQRRAEGLARPVLALVQAQPTAPPDDDDDAGPAHKRSTAANSYRLVLLEPAEG 98

Query: 136 VFT-MRQLASNRPNFKKGIRIHAMVVG------RELVVIGGWDVLENRSTAEVNIYDLLS 294
            +T +        +     ++ A V G      R LVV+GGWD      T  V +YD LS
Sbjct: 99  RWTPLPPPPGPSQSLPLFCQVAAAVDGGGQGRKRLLVVVGGWDPETWAPTDAVLVYDFLS 158

Query: 295 GAWRPGAPNPAPGRT 339
           GAWR GAP P P R+
Sbjct: 159 GAWRRGAPMPGPRRS 173


>gb|ESW22671.1| hypothetical protein PHAVU_005G172400g [Phaseolus vulgaris]
          Length = 360

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 38/127 (29%), Positives = 63/127 (49%), Gaps = 14/127 (11%)
 Frame = +1

Query: 1   LDSPSFYRIRRAAGLAPRVVTLLFRGKLPHTVGK------------FHLALYEPDTGVFT 144
           + SP F+R RR    A +++  + + K+     +            + L+++EP+TG+++
Sbjct: 38  IHSPEFHRRRRTTKHAQKILVTV-QSKIESEKARTGLLAKASANPVYRLSVFEPETGLWS 96

Query: 145 MRQLASNRPNFKKGIRIHAMV--VGRELVVIGGWDVLENRSTAEVNIYDLLSGAWRPGAP 318
              L    P    G+ +   +  VG ELVV+GGWD    +++  V IY+ LS  WR GA 
Sbjct: 97  ELPLG---PELASGLPMFCQIAGVGYELVVMGGWDPDSWKASNSVFIYNFLSAKWRRGAD 153

Query: 319 NPAPGRT 339
            P   RT
Sbjct: 154 MPGGPRT 160


>ref|XP_002271537.1| PREDICTED: F-box/kelch-repeat protein At1g80440-like [Vitis
           vinifera]
          Length = 308

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 39/121 (32%), Positives = 62/121 (51%), Gaps = 8/121 (6%)
 Frame = +1

Query: 1   LDSPSFYRIRRAAGLAPRVVTLLFR------GKLPHTVGKFHLALYEPDTGVFTMRQLAS 162
           L  P F R R+ AG    V+ +         GK       + L L++PD+G ++  +L S
Sbjct: 39  LQLPLFLRHRKTAGFTTNVIVMAQSPPQTNTGKAIPLANSYRLTLFDPDSGSWS--ELPS 96

Query: 163 NRPNFKKGIRIHAMVVG--RELVVIGGWDVLENRSTAEVNIYDLLSGAWRPGAPNPAPGR 336
             P   +G+ ++  +VG   +LVVIGG+D+   +S   V IY+++S  WR GA  P   R
Sbjct: 97  -LPGMNRGLPLYCGLVGVGSDLVVIGGYDLETWKSLNAVFIYNVVSATWRRGANIPGVRR 155

Query: 337 T 339
           +
Sbjct: 156 S 156


>gb|EEC72719.1| hypothetical protein OsI_06324 [Oryza sativa Indica Group]
          Length = 361

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 42/128 (32%), Positives = 62/128 (48%), Gaps = 15/128 (11%)
 Frame = +1

Query: 1   LDSPSFYRIRRAAGLAPRVVTLLFRGKLPHTVG-----------KFHLALYEPDTGVFTM 147
           ++SP ++R+RRA G+A R +  L + + P                + L L++P TG +  
Sbjct: 41  VESPFYHRLRRARGMA-RPLLALAQAEPPLAAAGPANKYAGLSTSYRLVLHDPVTGGWAA 99

Query: 148 RQL---ASNRPNFKKGIRIHAMV-VGRELVVIGGWDVLENRSTAEVNIYDLLSGAWRPGA 315
                 A   P F +   + A     R LVV+GGWD      T  V++YD LSG+WR GA
Sbjct: 100 LPPLPGAGGLPLFCQLASVAACGGERRRLVVVGGWDPETWAPTDAVHVYDFLSGSWRRGA 159

Query: 316 PNPAPGRT 339
             P P R+
Sbjct: 160 AMPGPRRS 167


>ref|NP_001057979.1| Os06g0594400 [Oryza sativa Japonica Group]
           gi|50725404|dbj|BAD32878.1| kelch repeat-containing
           F-box-like [Oryza sativa Japonica Group]
           gi|50725654|dbj|BAD33120.1| kelch repeat-containing
           F-box-like [Oryza sativa Japonica Group]
           gi|113596019|dbj|BAF19893.1| Os06g0594400 [Oryza sativa
           Japonica Group] gi|215701464|dbj|BAG92888.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 381

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 41/133 (30%), Positives = 64/133 (48%), Gaps = 20/133 (15%)
 Frame = +1

Query: 1   LDSPSFYRIRRAAGLA-PRVVTLLFRGKLPHTV--------------GKFHLALYEPDTG 135
           ++SP++ R+R+A GLA P +  +  R +L                    + + L +P  G
Sbjct: 41  VESPAYNRLRKAEGLARPALALVQARRELAEAGPAADKQSSAGGVPGNSYRMVLLDPAEG 100

Query: 136 VFT----MRQLASNRPNFKKGIRIHAMVVGRE-LVVIGGWDVLENRSTAEVNIYDLLSGA 300
            +T    +   + + P F +   +   V GR+ LVV+GGWD      T  V +YD L+GA
Sbjct: 101 RWTPLPEVGGASGSLPLFCQVAAVDGGVEGRKRLVVVGGWDPETWAPTDSVLVYDFLTGA 160

Query: 301 WRPGAPNPAPGRT 339
           WR GA  P P R+
Sbjct: 161 WRRGAAMPGPRRS 173


Top