BLASTX nr result

ID: Zingiber23_contig00054190 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00054190
         (285 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003574087.1| PREDICTED: uncharacterized protein LOC100823...    56   6e-06
dbj|BAJ88030.1| predicted protein [Hordeum vulgare subsp. vulgare]     55   1e-05

>ref|XP_003574087.1| PREDICTED: uncharacterized protein LOC100823186 [Brachypodium
           distachyon]
          Length = 358

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 10/96 (10%)
 Frame = -2

Query: 284 NKIGRGLAPRALLASLMDHTSPSQ------ETSQTASFLTVIKSFSSLSLQE----ENDS 135
           ++ G+GLA R    +  D     Q      E S      TV KS S+   QE     + S
Sbjct: 263 SRAGKGLALRPKSGNRPDMNKSHQNLIAMLEPSFDDGLQTVKKSSSTPEFQEPESNSSSS 322

Query: 134 AWSYSRWTPKPDSITKPILSSLPKQISVWRSKAALD 27
            WS S+W+ KPD  T P+  S+PK I+ W++KAA D
Sbjct: 323 IWSASKWSLKPDGFTLPLFDSIPKPIAAWKNKAARD 358


>dbj|BAJ88030.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 357

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 34/96 (35%), Positives = 48/96 (50%), Gaps = 10/96 (10%)
 Frame = -2

Query: 284 NKIGRGLAPRALLASLMDHTSPSQ------ETSQTASFLTVIKSFSSLSLQEENDSA--- 132
           ++ G+GLA R    +  D     Q      E S      TV KS S+   QE   S+   
Sbjct: 262 SRAGKGLALRPKSGTRPDMNKSHQNLIAMSEPSFDGGLQTVKKSSSTPEFQEPESSSGSS 321

Query: 131 -WSYSRWTPKPDSITKPILSSLPKQISVWRSKAALD 27
            WS S+W+ KPD+   P+  S+PK I+ W++KAA D
Sbjct: 322 IWSASKWSLKPDAFALPLFDSIPKPIAAWKNKAARD 357


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