BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00054178
         (437 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003567226.1| PREDICTED: putative pentatricopeptide repeat...   130   2e-28
gb|EMT22365.1| hypothetical protein F775_19209 [Aegilops tauschii]    126   3e-27
ref|XP_004972232.1| PREDICTED: putative pentatricopeptide repeat...   122   4e-26
ref|XP_002456545.1| hypothetical protein SORBIDRAFT_03g038140 [S...   119   3e-25
gb|EAY76294.1| hypothetical protein OsI_04228 [Oryza sativa Indi...   118   7e-25
ref|NP_001044643.1| Os01g0819800 [Oryza sativa Japonica Group] g...   118   9e-25
gb|EMJ04957.1| hypothetical protein PRUPE_ppa003558mg [Prunus pe...   114   1e-23
tpg|DAA57074.1| TPA: hypothetical protein ZEAMMB73_804341 [Zea m...   114   2e-23
ref|XP_002276416.2| PREDICTED: putative pentatricopeptide repeat...   112   7e-23
emb|CBI30310.3| unnamed protein product [Vitis vinifera]              112   7e-23
gb|EMT17149.1| hypothetical protein F775_01863 [Aegilops tauschii]    110   1e-22
ref|XP_004305658.1| PREDICTED: putative pentatricopeptide repeat...   106   3e-21
ref|XP_006430175.1| hypothetical protein CICLE_v10011274mg [Citr...   106   4e-21
ref|XP_006407445.1| hypothetical protein EUTSA_v10022435mg [Eutr...   106   4e-21
ref|XP_004494044.1| PREDICTED: putative pentatricopeptide repeat...   105   8e-21
ref|XP_002309422.2| hypothetical protein POPTR_0006s22800g [Popu...   104   1e-20
ref|XP_006481751.1| PREDICTED: putative pentatricopeptide repeat...   104   1e-20
emb|CAJ32535.1| pentatricopeptide repeat-containing protein [Hor...   103   2e-20
ref|XP_002530329.1| pentatricopeptide repeat-containing protein,...   103   2e-20
gb|EOY08282.1| Pentatricopeptide repeat (PPR) superfamily protei...   102   4e-20

>ref|XP_003567226.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g11460-like [Brachypodium distachyon]
          Length = 648

 Score =  130 bits (327), Expect = 2e-28
 Identities = 71/146 (48%), Positives = 95/146 (65%), Gaps = 2/146 (1%)
 Frame = -2

Query: 436 AALATFRRMRLAGVPFDDVTFXXXXXXXXXXXXXXLHGVAFRSSLVFAPSVSNCLLSCFS 257
           A  A FRRMR+AGV FD VT               LH +A R+ L    SV+NCL+S ++
Sbjct: 154 ACFALFRRMRVAGVRFDAVTLLTLVPAAPPSVVPQLHALAARAGLAAETSVANCLISVYA 213

Query: 256 RIGAVDVARQLFDEMPDQRKDLVSWNAMISCYAQNGLAHQVLAFYDKMK--ESTSVEPDA 83
           R GA  +ARQ+FDEMP   +DLVSWNA++S ++QNGLA   L  Y +M+  +   VEPDA
Sbjct: 214 RRGAA-LARQVFDEMPAASRDLVSWNAVLSAHSQNGLAVDALDLYSRMRGCDGHGVEPDA 272

Query: 82  ITLICVLSSCANLGAHSIGRRIESFI 5
           +TL+ VLSSCA+LGA S+G  +E ++
Sbjct: 273 VTLVSVLSSCAHLGARSVGLGVERYM 298



 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 30/87 (34%), Positives = 53/87 (60%)
 Frame = -2

Query: 280 NCLLSCFSRIGAVDVARQLFDEMPDQRKDLVSWNAMISCYAQNGLAHQVLAFYDKMKEST 101
           N L++ ++R G +  A+QLF+EMP  RK +VSW A+I+ Y  +G     +  +  M  S 
Sbjct: 313 NALINFYARCGCLPQAQQLFNEMP--RKSIVSWTALITGYGMHGHGEVAINLFQTM-VSE 369

Query: 100 SVEPDAITLICVLSSCANLGAHSIGRR 20
            + PD + ++ +LS+C++ G +  GR+
Sbjct: 370 GIRPDNVAMVGLLSACSHAGMYDEGRK 396


>gb|EMT22365.1| hypothetical protein F775_19209 [Aegilops tauschii]
          Length = 721

 Score =  126 bits (316), Expect = 3e-27
 Identities = 68/146 (46%), Positives = 93/146 (63%), Gaps = 2/146 (1%)
 Frame = -2

Query: 436 AALATFRRMRLAGVPFDDVTFXXXXXXXXXXXXXXLHGVAFRSSLVFAPSVSNCLLSCFS 257
           A  A FRRMR AG PFD VT               LH +A ++ L    +V+NCL+S ++
Sbjct: 245 ACFALFRRMRAAGAPFDAVTLMTLLPAAPHSLVPQLHALAGKAGLAAETNVANCLISAYA 304

Query: 256 RIGAVDVARQLFDEMPDQRKDLVSWNAMISCYAQNGLAHQVLAFYDKM--KESTSVEPDA 83
           R GA  +ARQ+FDEMP   +D+VSWNA++S +AQNGLA   L  Y +M   + + VEPDA
Sbjct: 305 RRGA-GLARQVFDEMPLTSRDIVSWNAVLSAHAQNGLAVDALDLYSRMCGHDGSGVEPDA 363

Query: 82  ITLICVLSSCANLGAHSIGRRIESFI 5
           +TL+ VLSSCA+LGA  +G  +E ++
Sbjct: 364 VTLVGVLSSCAHLGARGVGLGVERYM 389



 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 29/87 (33%), Positives = 53/87 (60%)
 Frame = -2

Query: 280 NCLLSCFSRIGAVDVARQLFDEMPDQRKDLVSWNAMISCYAQNGLAHQVLAFYDKMKEST 101
           N L++  +R G++  A++LF+EMP  RK +VSW A+I+ Y  +G     +  +  M  S 
Sbjct: 404 NSLINFHARCGSLPQAQRLFNEMP--RKSIVSWTALITGYGMHGHGDVAVNLFQAMV-SE 460

Query: 100 SVEPDAITLICVLSSCANLGAHSIGRR 20
            + PD + ++ +LS+C++ G +  GR+
Sbjct: 461 GIRPDNVAMVGLLSACSHAGMYEEGRK 487


>ref|XP_004972232.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g11460-like [Setaria italica]
          Length = 640

 Score =  122 bits (307), Expect = 4e-26
 Identities = 68/148 (45%), Positives = 91/148 (61%), Gaps = 4/148 (2%)
 Frame = -2

Query: 436 AALATFRRMRLAGVPFDDVTFXXXXXXXXXXXXXXLHGVAFRSSLVFAPSVSNCLLSCFS 257
           A  A FRRMR A V FD VT               +H +A R+ L    SV+NCL+S ++
Sbjct: 145 ACFAVFRRMRAASVRFDAVTLLALVPAAPLSAVPQVHALAARAGLAAETSVANCLISTYA 204

Query: 256 RIGAVD--VARQLFDEMPDQRKDLVSWNAMISCYAQNGLAHQVLAFYDKM--KESTSVEP 89
           R GA    +AR++FDEMP   +DLVSWNA++S +AQNGLA   L  Y +M   +   VEP
Sbjct: 205 RGGAAGAALARRVFDEMPAASRDLVSWNAVLSAHAQNGLAVDALELYRRMHGPDGGGVEP 264

Query: 88  DAITLICVLSSCANLGAHSIGRRIESFI 5
           DA+TL+ VLSSCA+LGA  +G  +E ++
Sbjct: 265 DAVTLVGVLSSCAHLGARGVGFDVERYV 292



 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 31/87 (35%), Positives = 56/87 (64%)
 Frame = -2

Query: 280 NCLLSCFSRIGAVDVARQLFDEMPDQRKDLVSWNAMISCYAQNGLAHQVLAFYDKMKEST 101
           N L++  +R G++  A+QLFDEMP  R+ +VSW A+I+ Y  +G     ++ +++M  S 
Sbjct: 307 NALINFHARCGSLPRAQQLFDEMP--RRSIVSWTALITGYGMHGHGDVAVSLFERM-VSE 363

Query: 100 SVEPDAITLICVLSSCANLGAHSIGRR 20
            + PD I ++ +LS+C++ G +  GR+
Sbjct: 364 GIRPDNIVMVGLLSACSHAGMYDEGRK 390


>ref|XP_002456545.1| hypothetical protein SORBIDRAFT_03g038140 [Sorghum bicolor]
           gi|241928520|gb|EES01665.1| hypothetical protein
           SORBIDRAFT_03g038140 [Sorghum bicolor]
          Length = 640

 Score =  119 bits (299), Expect = 3e-25
 Identities = 67/148 (45%), Positives = 92/148 (62%), Gaps = 4/148 (2%)
 Frame = -2

Query: 436 AALATFRRMRLAGVPFDDVTFXXXXXXXXXXXXXXLHGVAFRSSLVFAPSVSNCLLSCFS 257
           A+ A FRRMR A V FD VT               +H +A R  L    SV+NCL+S ++
Sbjct: 143 ASFALFRRMRAAAVGFDAVTLLALVPATPLSVVPQVHALAARVGLATETSVANCLMSTYA 202

Query: 256 RIGAVD--VARQLFDEMPDQRKDLVSWNAMISCYAQNGLAHQVLAFYDKMK--ESTSVEP 89
           R GA    +AR++FDEMP   +DLVSWNA++S +AQNGLA   L  Y +M+  E + VEP
Sbjct: 203 RGGAFGAALARRVFDEMPLASRDLVSWNAVLSAHAQNGLAVDALELYRRMRSPEGSGVEP 262

Query: 88  DAITLICVLSSCANLGAHSIGRRIESFI 5
           DA+T++ VLSS A+LGA  +G  +E ++
Sbjct: 263 DAVTIVGVLSSAAHLGARGVGFDVEHYV 290



 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 30/87 (34%), Positives = 55/87 (63%)
 Frame = -2

Query: 280 NCLLSCFSRIGAVDVARQLFDEMPDQRKDLVSWNAMISCYAQNGLAHQVLAFYDKMKEST 101
           N L++  +R G++  A+QLFDEMP  RK +VSW A+I+ +  +G     ++ +++M  S 
Sbjct: 305 NALINFHARCGSLPRAQQLFDEMP--RKSIVSWTALITGHGMHGNGDVAVSLFERM-VSE 361

Query: 100 SVEPDAITLICVLSSCANLGAHSIGRR 20
            + PD + ++ + S+C++ G +  GRR
Sbjct: 362 GIRPDNVAMVALFSACSHAGLYDEGRR 388


>gb|EAY76294.1| hypothetical protein OsI_04228 [Oryza sativa Indica Group]
          Length = 646

 Score =  118 bits (296), Expect = 7e-25
 Identities = 68/144 (47%), Positives = 91/144 (63%), Gaps = 5/144 (3%)
 Frame = -2

Query: 421 FRRMRLA-GVPFDDVTFXXXXXXXXXXXXXXLHGVAFRSSLVFAPSVSNCLLSCFSRIGA 245
           FRRMR+A GV FD VT               LH +A RS L    SV+NCL+S ++R G 
Sbjct: 154 FRRMRVAAGVRFDAVTLLALVPVAPLGIVPQLHALAARSGLAANTSVANCLVSVYARGGG 213

Query: 244 --VDVARQLFDEMPDQRKDLVSWNAMISCYAQNGLAHQVLAFYDKMK--ESTSVEPDAIT 77
               +ARQ+F+EMP   +DLVSWNA+IS +AQNGLA + +  Y +M+  E   VEPDA+T
Sbjct: 214 GGASLARQVFEEMPRASRDLVSWNAVISAHAQNGLAVEAVELYRRMRGPEGGGVEPDAVT 273

Query: 76  LICVLSSCANLGAHSIGRRIESFI 5
           L+ VLSSCA+ GA  +G  +E ++
Sbjct: 274 LVGVLSSCAHTGARRVGLDVEQYV 297



 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 28/87 (32%), Positives = 54/87 (62%)
 Frame = -2

Query: 280 NCLLSCFSRIGAVDVARQLFDEMPDQRKDLVSWNAMISCYAQNGLAHQVLAFYDKMKEST 101
           N L++  +R G++  A++LFDEMP+  + +VSW A+I  Y  +G     +  ++ M  S 
Sbjct: 312 NALINFHARCGSLAQAQELFDEMPE--RSVVSWTALIIGYGMHGQGDIAVDLFETMV-SE 368

Query: 100 SVEPDAITLICVLSSCANLGAHSIGRR 20
           +  PD++ ++ +LS+C++ G +  GR+
Sbjct: 369 ATAPDSVAMVGLLSACSHAGMYDEGRK 395


>ref|NP_001044643.1| Os01g0819800 [Oryza sativa Japonica Group]
           gi|21104789|dbj|BAB93376.1| pentatricopeptide (PPR)
           repeat-containing protein-like [Oryza sativa Japonica
           Group] gi|113534174|dbj|BAF06557.1| Os01g0819800 [Oryza
           sativa Japonica Group]
          Length = 646

 Score =  118 bits (295), Expect = 9e-25
 Identities = 68/144 (47%), Positives = 91/144 (63%), Gaps = 5/144 (3%)
 Frame = -2

Query: 421 FRRMRLA-GVPFDDVTFXXXXXXXXXXXXXXLHGVAFRSSLVFAPSVSNCLLSCFSRIGA 245
           FRRMR+A GV FD VT               LH +A RS L    SV+NCL+S ++R G 
Sbjct: 154 FRRMRVAAGVRFDAVTLLALVPVAPLGIVPQLHALAARSGLAANTSVANCLVSVYARGGG 213

Query: 244 --VDVARQLFDEMPDQRKDLVSWNAMISCYAQNGLAHQVLAFYDKMK--ESTSVEPDAIT 77
               +ARQ+F+EMP   +DLVSWNA+IS +AQNGLA + +  Y +M+  E   VEPDA+T
Sbjct: 214 GGASLARQVFEEMPRASRDLVSWNAVISAHAQNGLAVEAVELYRRMRGPEGGGVEPDAVT 273

Query: 76  LICVLSSCANLGAHSIGRRIESFI 5
           L+ VLSSCA+ GA  +G  +E ++
Sbjct: 274 LVGVLSSCAHTGARRVGLDVERYV 297



 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 27/87 (31%), Positives = 53/87 (60%)
 Frame = -2

Query: 280 NCLLSCFSRIGAVDVARQLFDEMPDQRKDLVSWNAMISCYAQNGLAHQVLAFYDKMKEST 101
           N L++  +R G++  A++LFDEMP+  + +VSW  +I  Y  +G     +  ++ M  S 
Sbjct: 312 NALINFHARCGSLAQAQELFDEMPE--RSVVSWTTLIIGYGMHGQGDIAVDLFETMV-SE 368

Query: 100 SVEPDAITLICVLSSCANLGAHSIGRR 20
           +  PD++ ++ +LS+C++ G +  GR+
Sbjct: 369 ATAPDSVAMVGLLSACSHAGMYDEGRK 395


>gb|EMJ04957.1| hypothetical protein PRUPE_ppa003558mg [Prunus persica]
          Length = 566

 Score =  114 bits (285), Expect = 1e-23
 Identities = 66/144 (45%), Positives = 88/144 (61%), Gaps = 4/144 (2%)
 Frame = -2

Query: 433 ALATFRRMRLAGVPFDDVTFXXXXXXXXXXXXXXL----HGVAFRSSLVFAPSVSNCLLS 266
           A++ FRRMR AGV  + VT               L    HG + +       SV+NCLL+
Sbjct: 97  AVSLFRRMRAAGVEVNSVTMLGLVPGCAAPVHLRLGMCLHGCSVKCGFDVDLSVTNCLLT 156

Query: 265 CFSRIGAVDVARQLFDEMPDQRKDLVSWNAMISCYAQNGLAHQVLAFYDKMKESTSVEPD 86
            + + G+VD AR+LFD MP+  K L++WNAMIS Y+QNGLA  VL  Y +M ES  V PD
Sbjct: 157 MYVKCGSVDHARKLFDTMPE--KGLITWNAMISGYSQNGLATHVLNLYKEM-ESCGVSPD 213

Query: 85  AITLICVLSSCANLGAHSIGRRIE 14
            +TL+ VLSSC ++GAH +GR +E
Sbjct: 214 PVTLVGVLSSCTHIGAHGVGREVE 237


>tpg|DAA57074.1| TPA: hypothetical protein ZEAMMB73_804341 [Zea mays]
          Length = 1056

 Score =  114 bits (284), Expect = 2e-23
 Identities = 65/148 (43%), Positives = 89/148 (60%), Gaps = 4/148 (2%)
 Frame = -2

Query: 436  AALATFRRMRLAGVPFDDVTFXXXXXXXXXXXXXXLHGVAFRSSLVFAPSVSNCLLSCFS 257
            A  A FRRMR   V FD VT               +H +A +  L    SV+NCL+S ++
Sbjct: 559  ACFALFRRMRAIAVRFDAVTLLALVPAAPLSVVPQVHALAAQVGLATETSVANCLMSTYA 618

Query: 256  RIGAVD--VARQLFDEMPDQRKDLVSWNAMISCYAQNGLAHQVLAFYDKMK--ESTSVEP 89
            R GA    +AR++FDEMP   +DLVSWNA++S +AQNGLA   L  Y +M+  E + VEP
Sbjct: 619  RGGAFGAALARRVFDEMPLASRDLVSWNAVLSAHAQNGLAVDALDLYRRMRSPEGSGVEP 678

Query: 88   DAITLICVLSSCANLGAHSIGRRIESFI 5
            DA+T++ VLSS A+LGA  +G   E ++
Sbjct: 679  DAVTIVGVLSSAAHLGARGVGFDAEHYV 706



 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 30/86 (34%), Positives = 54/86 (62%)
 Frame = -2

Query: 280 NCLLSCFSRIGAVDVARQLFDEMPDQRKDLVSWNAMISCYAQNGLAHQVLAFYDKMKEST 101
           N L++  +R G++  A+QLFDEMP   K +VSW A+I+ +  +G     ++ +++M  S 
Sbjct: 721 NALINFHARCGSLPRAQQLFDEMP--AKSIVSWTALITGHGMHGNGGVAVSLFERM-VSE 777

Query: 100 SVEPDAITLICVLSSCANLGAHSIGR 23
            + PD + ++ VLS+C++ G +  GR
Sbjct: 778 GIHPDNVAMVGVLSACSHAGLYDEGR 803


>ref|XP_002276416.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g11460-like [Vitis vinifera]
          Length = 629

 Score =  112 bits (279), Expect = 7e-23
 Identities = 69/147 (46%), Positives = 86/147 (58%), Gaps = 4/147 (2%)
 Frame = -2

Query: 433 ALATFRRMRLAGVPFDDVTFXXXXXXXXXXXXXXL----HGVAFRSSLVFAPSVSNCLLS 266
           A+  FR+MR  GV  + VT                    H  + R  L    SV NCLL+
Sbjct: 143 AVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGDLSVGNCLLT 202

Query: 265 CFSRIGAVDVARQLFDEMPDQRKDLVSWNAMISCYAQNGLAHQVLAFYDKMKESTSVEPD 86
            + R G+VD AR+LFD MP+  K L++WNAMIS YAQNGLA  VL  Y KM E T + PD
Sbjct: 203 MYVRCGSVDFARKLFDGMPE--KGLITWNAMISGYAQNGLAGHVLDLYRKM-EFTGIVPD 259

Query: 85  AITLICVLSSCANLGAHSIGRRIESFI 5
            +TL+ VLSSCA+LGAH+ GR +E  I
Sbjct: 260 PVTLVGVLSSCAHLGAHAAGREVEQRI 286



 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 29/90 (32%), Positives = 51/90 (56%)
 Frame = -2

Query: 310 SSLVFAPSVSNCLLSCFSRIGAVDVARQLFDEMPDQRKDLVSWNAMISCYAQNGLAHQVL 131
           S   F P + N L++ ++R G +  AR +FD M +  K+++SW A+I+ Y  +G     +
Sbjct: 289 SGFGFNPFLKNALINMYARCGNLVKARAIFDGMTE--KNVISWTAIIAGYGMHGQGELAV 346

Query: 130 AFYDKMKESTSVEPDAITLICVLSSCANLG 41
             +D+M  S  + PD    + VLS+C++ G
Sbjct: 347 QLFDEMISSDEL-PDGAAFVSVLSACSHAG 375


>emb|CBI30310.3| unnamed protein product [Vitis vinifera]
          Length = 543

 Score =  112 bits (279), Expect = 7e-23
 Identities = 69/147 (46%), Positives = 86/147 (58%), Gaps = 4/147 (2%)
 Frame = -2

Query: 433 ALATFRRMRLAGVPFDDVTFXXXXXXXXXXXXXXL----HGVAFRSSLVFAPSVSNCLLS 266
           A+  FR+MR  GV  + VT                    H  + R  L    SV NCLL+
Sbjct: 143 AVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGDLSVGNCLLT 202

Query: 265 CFSRIGAVDVARQLFDEMPDQRKDLVSWNAMISCYAQNGLAHQVLAFYDKMKESTSVEPD 86
            + R G+VD AR+LFD MP+  K L++WNAMIS YAQNGLA  VL  Y KM E T + PD
Sbjct: 203 MYVRCGSVDFARKLFDGMPE--KGLITWNAMISGYAQNGLAGHVLDLYRKM-EFTGIVPD 259

Query: 85  AITLICVLSSCANLGAHSIGRRIESFI 5
            +TL+ VLSSCA+LGAH+ GR +E  I
Sbjct: 260 PVTLVGVLSSCAHLGAHAAGREVEQRI 286



 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 29/90 (32%), Positives = 51/90 (56%)
 Frame = -2

Query: 310 SSLVFAPSVSNCLLSCFSRIGAVDVARQLFDEMPDQRKDLVSWNAMISCYAQNGLAHQVL 131
           S   F P + N L++ ++R G +  AR +FD M +  K+++SW A+I+ Y  +G     +
Sbjct: 289 SGFGFNPFLKNALINMYARCGNLVKARAIFDGMTE--KNVISWTAIIAGYGMHGQGELAV 346

Query: 130 AFYDKMKESTSVEPDAITLICVLSSCANLG 41
             +D+M  S  + PD    + VLS+C++ G
Sbjct: 347 QLFDEMISSDEL-PDGAAFVSVLSACSHAG 375


>gb|EMT17149.1| hypothetical protein F775_01863 [Aegilops tauschii]
          Length = 562

 Score =  110 bits (276), Expect = 1e-22
 Identities = 65/146 (44%), Positives = 89/146 (60%), Gaps = 2/146 (1%)
 Frame = -2

Query: 436 AALATFRRMRL--AGVPFDDVTFXXXXXXXXXXXXXXLHGVAFRSSLVFAPSVSNCLLSC 263
           A  A FRRMR+  A V F+ VT               LH +A R+ L    +V+NCL+S 
Sbjct: 92  ACFALFRRMRVHVASVRFNAVTLLALLPATPTTVVPQLHALAARAGLSSGTTVANCLISV 151

Query: 262 FSRIGAVDVARQLFDEMPDQRKDLVSWNAMISCYAQNGLAHQVLAFYDKMKESTSVEPDA 83
           + R  A  +ARQ+FDEMP   +DLVSW A++S +AQNGLA   L  Y +M+    VEPDA
Sbjct: 152 YGRSSAA-LARQVFDEMPLASRDLVSWTAVLSAHAQNGLAVDALELYRRMR-GHGVEPDA 209

Query: 82  ITLICVLSSCANLGAHSIGRRIESFI 5
           +TL+ VLSSCA+L A S+G  ++ ++
Sbjct: 210 LTLVGVLSSCAHLAARSVGLDVDRYV 235



 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 32/93 (34%), Positives = 55/93 (59%), Gaps = 2/93 (2%)
 Frame = -2

Query: 298 FAPSVSNC--LLSCFSRIGAVDVARQLFDEMPDQRKDLVSWNAMISCYAQNGLAHQVLAF 125
           F  +V  C  L++  +R G +  A+QLFDEMP  +K +VSW A+I+ Y  +G     +  
Sbjct: 242 FRANVQLCSALINFHARYGNLPQAQQLFDEMP--KKSIVSWTALITGYGMHGHGDMAIKL 299

Query: 124 YDKMKESTSVEPDAITLICVLSSCANLGAHSIG 26
           + +M  S  V+PD + ++ +LS+C++ G +  G
Sbjct: 300 FQRMV-SEGVQPDNVAMVALLSACSHAGKYEEG 331


>ref|XP_004305658.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g11460-like [Fragaria vesca subsp. vesca]
          Length = 608

 Score =  106 bits (265), Expect = 3e-21
 Identities = 65/144 (45%), Positives = 84/144 (58%), Gaps = 4/144 (2%)
 Frame = -2

Query: 433 ALATFRRMRLAGVPFDDVTFXXXXXXXXXXXXXXL----HGVAFRSSLVFAPSVSNCLLS 266
           A+  FRRMR  GV  + VT               L    HG + +  L    SV NCLL+
Sbjct: 126 AVLLFRRMREEGVGVNSVTMLGLIPGCAAPGHLSLGMCLHGSSVKCGLDSDLSVRNCLLT 185

Query: 265 CFSRIGAVDVARQLFDEMPDQRKDLVSWNAMISCYAQNGLAHQVLAFYDKMKESTSVEPD 86
            + + G VD AR++FD MP+  K L++WNAMIS YAQNGLA  VL  Y +M E+    PD
Sbjct: 186 MYVKCGLVDNARKIFDAMPE--KGLITWNAMISGYAQNGLASHVLNLYREM-EACGFFPD 242

Query: 85  AITLICVLSSCANLGAHSIGRRIE 14
            +TL+ VLSSC +LGAH +GR +E
Sbjct: 243 PVTLVGVLSSCTHLGAHGVGREVE 266


>ref|XP_006430175.1| hypothetical protein CICLE_v10011274mg [Citrus clementina]
           gi|557532232|gb|ESR43415.1| hypothetical protein
           CICLE_v10011274mg [Citrus clementina]
          Length = 636

 Score =  106 bits (264), Expect = 4e-21
 Identities = 64/147 (43%), Positives = 87/147 (59%), Gaps = 4/147 (2%)
 Frame = -2

Query: 433 ALATFRRMRLAGVPFDDVTFXXXXXXXXXXXXXXL----HGVAFRSSLVFAPSVSNCLLS 266
           A++ F +MR  GV  + VT               L    H +  +  L    SV NCL++
Sbjct: 151 AVSLFGKMREQGVEINSVTMLCLLPICVDPGYLWLGMCCHCICVKFGLDLDFSVGNCLMT 210

Query: 265 CFSRIGAVDVARQLFDEMPDQRKDLVSWNAMISCYAQNGLAHQVLAFYDKMKESTSVEPD 86
            + + G+VD  R+LFD++P+  K L++WNAMIS YAQNGLA  VL  Y +MK S  V PD
Sbjct: 211 MYVKCGSVDYGRKLFDQVPE--KGLITWNAMISGYAQNGLATDVLELYREMK-SLGVCPD 267

Query: 85  AITLICVLSSCANLGAHSIGRRIESFI 5
           A+T + VLSSCA+LGAHS+G  +E  I
Sbjct: 268 AVTFVGVLSSCAHLGAHSVGLEVEQQI 294



 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 30/84 (35%), Positives = 50/84 (59%)
 Frame = -2

Query: 292 PSVSNCLLSCFSRIGAVDVARQLFDEMPDQRKDLVSWNAMISCYAQNGLAHQVLAFYDKM 113
           P ++N L++ ++R G +  AR +FD MP  RK +VSW A+I  Y  +G     +  +D+M
Sbjct: 303 PFLNNALINMYARCGNLKKARAIFDGMP--RKTVVSWTAIIGGYGIHGHGEVAVQLFDEM 360

Query: 112 KESTSVEPDAITLICVLSSCANLG 41
            +S  + PD    + VLS+C++ G
Sbjct: 361 LKS-GIRPDGTAFVSVLSACSHAG 383



 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 31/96 (32%), Positives = 51/96 (53%)
 Frame = -2

Query: 328 HGVAFRSSLVFAPSVSNCLLSCFSRIGAVDVARQLFDEMPDQRKDLVSWNAMISCYAQNG 149
           H    +S     P V   L+S + +   VD AR++FDE        V +NA+IS Y  N 
Sbjct: 87  HCHVIKSGCELEPFVLTSLVSLYCKCRLVDNARKVFDESIKSTHLTVCYNALISGYVLNS 146

Query: 148 LAHQVLAFYDKMKESTSVEPDAITLICVLSSCANLG 41
           L  + ++ + KM+E   VE +++T++C+L  C + G
Sbjct: 147 LVSEAVSLFGKMREQ-GVEINSVTMLCLLPICVDPG 181


>ref|XP_006407445.1| hypothetical protein EUTSA_v10022435mg [Eutrema salsugineum]
           gi|557108591|gb|ESQ48898.1| hypothetical protein
           EUTSA_v10022435mg [Eutrema salsugineum]
          Length = 625

 Score =  106 bits (264), Expect = 4e-21
 Identities = 63/147 (42%), Positives = 85/147 (57%), Gaps = 4/147 (2%)
 Frame = -2

Query: 433 ALATFRRMRLAGVPFDDVTFXXXXXXXXXXXXXXL----HGVAFRSSLVFAPSVSNCLLS 266
           A+  FR+M+  GVP D VT               L    HG   +       +V N  ++
Sbjct: 142 AVCMFRKMKETGVPVDSVTMLGLVPVCTVPDHLWLGMSLHGQCVKGGTDSELAVLNSFVT 201

Query: 265 CFSRIGAVDVARQLFDEMPDQRKDLVSWNAMISCYAQNGLAHQVLAFYDKMKESTSVEPD 86
            + + G+V+  R+LFDEM    K L++WNA+IS YAQNGLAH VL  Y+KMK S+ V PD
Sbjct: 202 MYMKCGSVEFGRRLFDEM--HVKGLITWNAVISGYAQNGLAHDVLELYEKMK-SSGVCPD 258

Query: 85  AITLICVLSSCANLGAHSIGRRIESFI 5
            +TL+ VLSSCA+LGA  IG+ +E  I
Sbjct: 259 PVTLVSVLSSCAHLGAKKIGQEVEKLI 285



 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 34/82 (41%), Positives = 50/82 (60%)
 Frame = -2

Query: 286 VSNCLLSCFSRIGAVDVARQLFDEMPDQRKDLVSWNAMISCYAQNGLAHQVLAFYDKMKE 107
           +SN L+S ++R G +  AR +FD +P   K LVSW AMI CY  +G+A   L  +D M +
Sbjct: 296 LSNGLISMYARCGNLAKARAVFDIIPV--KSLVSWTAMIGCYGMHGMAETGLKLFDDMIK 353

Query: 106 STSVEPDAITLICVLSSCANLG 41
           S  + PD    + VLS+C++ G
Sbjct: 354 S-GMRPDGTVFVMVLSACSHSG 374


>ref|XP_004494044.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g11460-like [Cicer arietinum]
          Length = 641

 Score =  105 bits (261), Expect = 8e-21
 Identities = 55/105 (52%), Positives = 71/105 (67%)
 Frame = -2

Query: 328 HGVAFRSSLVFAPSVSNCLLSCFSRIGAVDVARQLFDEMPDQRKDLVSWNAMISCYAQNG 149
           H  AF        SV+N  L+ + + G V+ ARQLFDE+P   KDL++WNAMIS YAQNG
Sbjct: 192 HACAFTLGFDSDLSVANSFLTMYVKCGEVEYARQLFDEIPV--KDLITWNAMISGYAQNG 249

Query: 148 LAHQVLAFYDKMKESTSVEPDAITLICVLSSCANLGAHSIGRRIE 14
            A +VL  Y++MK+   V+PD +TL+ VL SCANLGA  IGR +E
Sbjct: 250 HARRVLEIYNEMKKVNGVKPDPVTLLGVLCSCANLGAQGIGREVE 294



 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 28/80 (35%), Positives = 48/80 (60%)
 Frame = -2

Query: 280 NCLLSCFSRIGAVDVARQLFDEMPDQRKDLVSWNAMISCYAQNGLAHQVLAFYDKMKEST 101
           N L++ ++R G +  AR++FD M +++K +VSW A+I  Y  +G     +  +D+M  S 
Sbjct: 310 NALINMYARCGNLVRAREVFDCMDEKKKSVVSWTAIIGGYGIHGEGEIAVELFDEMVRS- 368

Query: 100 SVEPDAITLICVLSSCANLG 41
            V PD    + VLS+C++ G
Sbjct: 369 GVRPDRTVFVTVLSACSHAG 388


>ref|XP_002309422.2| hypothetical protein POPTR_0006s22800g [Populus trichocarpa]
           gi|550336888|gb|EEE92945.2| hypothetical protein
           POPTR_0006s22800g [Populus trichocarpa]
          Length = 604

 Score =  104 bits (260), Expect = 1e-20
 Identities = 55/105 (52%), Positives = 72/105 (68%)
 Frame = -2

Query: 328 HGVAFRSSLVFAPSVSNCLLSCFSRIGAVDVARQLFDEMPDQRKDLVSWNAMISCYAQNG 149
           HG   +  L    SV NCLL+ + + G +D  R+LFDEMP  RK L++WNAMI+ YAQNG
Sbjct: 136 HGFCVKFGLDMDSSVGNCLLTMYVKSGEIDCGRKLFDEMP--RKGLITWNAMINGYAQNG 193

Query: 148 LAHQVLAFYDKMKESTSVEPDAITLICVLSSCANLGAHSIGRRIE 14
           LA+ VL  Y +M ES    PD +TL+ VLSSCA+LGA S+G+ +E
Sbjct: 194 LANNVLELYKEM-ESKGFCPDPLTLVGVLSSCAHLGALSVGKEVE 237



 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 32/107 (29%), Positives = 56/107 (52%)
 Frame = -2

Query: 328 HGVAFRSSLVFAPSVSNCLLSCFSRIGAVDVARQLFDEMPDQRKDLVSWNAMISCYAQNG 149
           H   F++  +  P V   L+S + +   +D AR+LFDE P  RK  V +N+++S YA N 
Sbjct: 33  HCHVFKTGCLLEPFVQTSLISMYGKCSLIDNARKLFDENPQSRKLTVCYNSLLSGYALNS 92

Query: 148 LAHQVLAFYDKMKESTSVEPDAITLICVLSSCANLGAHSIGRRIESF 8
               V+  + +M+E   VE + +T++ ++  C   G   +G  +  F
Sbjct: 93  RVKDVVVLFCEMRE-LGVEINGVTMLGLVQPCGIPGNLGLGMCVHGF 138



 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 29/89 (32%), Positives = 50/89 (56%)
 Frame = -2

Query: 292 PSVSNCLLSCFSRIGAVDVARQLFDEMPDQRKDLVSWNAMISCYAQNGLAHQVLAFYDKM 113
           P ++N L++ ++R G +  AR +FD MP   K +VSW A+I  Y  +G     +  +D+M
Sbjct: 249 PFLNNALVNMYARCGNLKKARDIFDGMPV--KSVVSWTAIIGGYGMHGQGEVAVELFDEM 306

Query: 112 KESTSVEPDAITLICVLSSCANLGAHSIG 26
                ++PD    + VLS+C++ G  + G
Sbjct: 307 IRG-GIKPDGTAFVSVLSACSHAGLTNKG 334


>ref|XP_006481751.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g11460-like [Citrus sinensis]
          Length = 636

 Score =  104 bits (259), Expect = 1e-20
 Identities = 63/147 (42%), Positives = 86/147 (58%), Gaps = 4/147 (2%)
 Frame = -2

Query: 433 ALATFRRMRLAGVPFDDVTFXXXXXXXXXXXXXXL----HGVAFRSSLVFAPSVSNCLLS 266
           A++ F +MR  GV  + VT               L    H +  +  L    SV NCL++
Sbjct: 151 AVSLFGKMREQGVEINPVTMLCLLPICVDPGYLWLGMCCHCICVKFGLDLDFSVGNCLMT 210

Query: 265 CFSRIGAVDVARQLFDEMPDQRKDLVSWNAMISCYAQNGLAHQVLAFYDKMKESTSVEPD 86
            + + G+VD  R+LFD++P+  K L++WNAMIS YAQNGLA  VL  Y +MK S  V PD
Sbjct: 211 MYVKCGSVDYGRKLFDQVPE--KGLITWNAMISGYAQNGLATHVLELYREMK-SLGVCPD 267

Query: 85  AITLICVLSSCANLGAHSIGRRIESFI 5
            +T + VLSSCA+LGAHS+G  +E  I
Sbjct: 268 GVTFVGVLSSCAHLGAHSVGLEVEQQI 294



 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 43/137 (31%), Positives = 66/137 (48%), Gaps = 7/137 (5%)
 Frame = -2

Query: 430 LATFRRMRLAGVPFDDVTFXXXXXXXXXXXXXXLHGVAFR-------SSLVFAPSVSNCL 272
           L  +R M+  GV  D VTF               H V          +SL   P ++N L
Sbjct: 253 LELYREMKSLGVCPDGVTFVGVLSSCAHLGA---HSVGLEVEQQIEANSLGSNPFLNNAL 309

Query: 271 LSCFSRIGAVDVARQLFDEMPDQRKDLVSWNAMISCYAQNGLAHQVLAFYDKMKESTSVE 92
           ++ ++R G +  AR +FD MP  RK +VSW A+I  Y  +G     +  +D+M +S  + 
Sbjct: 310 INMYARCGNLKKARAIFDGMP--RKTVVSWTAIIGGYGIHGHGEVAVQLFDEMLKS-GIR 366

Query: 91  PDAITLICVLSSCANLG 41
           PD    + VLS+C++ G
Sbjct: 367 PDGTAFVSVLSACSHAG 383



 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 39/135 (28%), Positives = 62/135 (45%), Gaps = 4/135 (2%)
 Frame = -2

Query: 433 ALATFRRMRLAGVPFDDVTFXXXXXXXXXXXXXXL----HGVAFRSSLVFAPSVSNCLLS 266
           AL+ +R+M   GV  +  TF                   H    +S     P V   L+S
Sbjct: 48  ALSLYRQMLCYGVTPNAFTFPFALKSCTALSLPFAGSQLHCHVIKSGCELEPFVLTSLVS 107

Query: 265 CFSRIGAVDVARQLFDEMPDQRKDLVSWNAMISCYAQNGLAHQVLAFYDKMKESTSVEPD 86
            + +   VD AR++FDE        V +NA+IS Y  N L  + ++ + KM+E   VE +
Sbjct: 108 LYCKCRLVDNARKVFDESIKSTHLTVCYNALISGYVLNSLVSEAVSLFGKMREQ-GVEIN 166

Query: 85  AITLICVLSSCANLG 41
            +T++C+L  C + G
Sbjct: 167 PVTMLCLLPICVDPG 181


>emb|CAJ32535.1| pentatricopeptide repeat-containing protein [Hordeum vulgare subsp.
           vulgare]
          Length = 652

 Score =  103 bits (258), Expect = 2e-20
 Identities = 61/146 (41%), Positives = 88/146 (60%), Gaps = 2/146 (1%)
 Frame = -2

Query: 436 AALATFRRMRL--AGVPFDDVTFXXXXXXXXXXXXXXLHGVAFRSSLVFAPSVSNCLLSC 263
           A  A FRRMR+  AG+ F+ VT               L  +A +S L    +V+NCL+S 
Sbjct: 157 ACFALFRRMRVHVAGLRFNAVTLLALLPVAPATVVPQLQALAAQSGLASRTTVANCLISV 216

Query: 262 FSRIGAVDVARQLFDEMPDQRKDLVSWNAMISCYAQNGLAHQVLAFYDKMKESTSVEPDA 83
           + R  +  +ARQ+FDEMP   +DLVSW A++S +AQ GLA   L  Y +M+    VEPDA
Sbjct: 217 YGR-SSPTLARQVFDEMPLATRDLVSWTAVLSAHAQGGLAVDALELYRRMR-GHGVEPDA 274

Query: 82  ITLICVLSSCANLGAHSIGRRIESFI 5
           +TL+ VLSSC++L A S+G  ++ ++
Sbjct: 275 LTLVGVLSSCSHLAARSVGLDVDRYV 300



 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 33/93 (35%), Positives = 57/93 (61%), Gaps = 2/93 (2%)
 Frame = -2

Query: 298 FAPSVSNC--LLSCFSRIGAVDVARQLFDEMPDQRKDLVSWNAMISCYAQNGLAHQVLAF 125
           F  +V  C  L++  +R G++  A+QLFDEMP  RK +VSW A+I+ Y  +G     + F
Sbjct: 307 FRANVQLCSALINFHARCGSLPQAQQLFDEMP--RKSIVSWTALITGYGMHGHGDIAINF 364

Query: 124 YDKMKESTSVEPDAITLICVLSSCANLGAHSIG 26
           + +M  S  + PD ++++ +LS+C++ G +  G
Sbjct: 365 FQRM-VSQGIRPDNVSMVALLSACSHAGKYEEG 396


>ref|XP_002530329.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223530133|gb|EEF32045.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 342

 Score =  103 bits (257), Expect = 2e-20
 Identities = 56/109 (51%), Positives = 74/109 (67%)
 Frame = -2

Query: 328 HGVAFRSSLVFAPSVSNCLLSCFSRIGAVDVARQLFDEMPDQRKDLVSWNAMISCYAQNG 149
           HG   +  LV   SV NCLL+ + + G V  AR+LF+++P   K L++WNAMI+ Y+QNG
Sbjct: 125 HGFCVKFGLVMDMSVGNCLLTMYVKCGEVGSARKLFNDIPG--KGLITWNAMINGYSQNG 182

Query: 148 LAHQVLAFYDKMKESTSVEPDAITLICVLSSCANLGAHSIGRRIESFIN 2
           LA  VL  Y +M E + V PDA+TL  VLSSCA+LGA S+GR IE  +N
Sbjct: 183 LATDVLELYREM-ELSGVSPDAVTLAGVLSSCAHLGAQSVGREIEERMN 230


>gb|EOY08282.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
           cacao]
          Length = 610

 Score =  102 bits (255), Expect = 4e-20
 Identities = 54/95 (56%), Positives = 69/95 (72%)
 Frame = -2

Query: 289 SVSNCLLSCFSRIGAVDVARQLFDEMPDQRKDLVSWNAMISCYAQNGLAHQVLAFYDKMK 110
           SVSNCLL+ + + GA++  R+LFDEMP  +K L++WNAMIS YAQNGLA  VL  Y KMK
Sbjct: 177 SVSNCLLTMYVKCGAIEFGRKLFDEMP--KKGLITWNAMISGYAQNGLASNVLELYKKMK 234

Query: 109 ESTSVEPDAITLICVLSSCANLGAHSIGRRIESFI 5
              +   DA+T + VLSSCA+LGA S+GR +E  I
Sbjct: 235 ACRNC-ADAVTFVGVLSSCAHLGAISVGREVEQRI 268