BLASTX nr result
ID: Zingiber23_contig00054162
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00054162
(307 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006661522.1| PREDICTED: DNA-directed RNA polymerase IV su... 96 5e-18
ref|XP_006653694.1| PREDICTED: DNA-directed RNA polymerase IV su... 96 5e-18
emb|CAD41657.3| OSJNBa0019K04.4 [Oryza sativa Japonica Group] 96 6e-18
gb|EEE61535.1| hypothetical protein OsJ_15844 [Oryza sativa Japo... 96 6e-18
gb|EEC77828.1| hypothetical protein OsI_17044 [Oryza sativa Indi... 96 6e-18
gb|EEE70198.1| hypothetical protein OsJ_30285 [Oryza sativa Japo... 94 2e-17
gb|EEC85033.1| hypothetical protein OsI_32338 [Oryza sativa Indi... 94 2e-17
emb|CAH66955.1| OSIGBa0147H17.3 [Oryza sativa Indica Group] 92 7e-17
gb|EMT22317.1| DNA-directed RNA polymerase III subunit RPC1 [Aeg... 92 9e-17
gb|EMS66983.1| DNA-directed RNA polymerase D subunit 1 [Triticum... 92 9e-17
ref|XP_003566523.1| PREDICTED: DNA-directed RNA polymerase D sub... 89 6e-16
gb|EMJ12114.1| hypothetical protein PRUPE_ppa000278mg [Prunus pe... 88 1e-15
ref|XP_004147993.1| PREDICTED: DNA-directed RNA polymerase D sub... 87 2e-15
ref|XP_004970758.1| PREDICTED: DNA-directed RNA polymerase D sub... 87 3e-15
ref|XP_004970756.1| PREDICTED: DNA-directed RNA polymerase D sub... 87 3e-15
ref|XP_004970755.1| PREDICTED: DNA-directed RNA polymerase D sub... 87 3e-15
ref|XP_004970754.1| PREDICTED: DNA-directed RNA polymerase D sub... 87 3e-15
ref|XP_004298730.1| PREDICTED: DNA-directed RNA polymerase D sub... 82 1e-13
ref|XP_006358859.1| PREDICTED: DNA-directed RNA polymerase IV su... 81 1e-13
ref|XP_006358858.1| PREDICTED: DNA-directed RNA polymerase IV su... 81 1e-13
>ref|XP_006661522.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like [Oryza
brachyantha]
Length = 1492
Score = 95.9 bits (237), Expect = 5e-18
Identities = 48/100 (48%), Positives = 64/100 (64%)
Frame = -1
Query: 301 IVEFSYDTSQGSIEGNIFNGTCEKKDVECPGLGGHPIGSWVACTISEAAYGALDVPTNSI 122
IV+FSY+T+ G +D + G G P+GSW AC+ISEAAYGALD P N++
Sbjct: 905 IVQFSYNTADGMF-----------RDHDLEGEPGAPVGSWAACSISEAAYGALDHPVNAL 953
Query: 121 ENSTLLKFKRVLECNKTNSSVKQVALLFLSKRLQDWRYGF 2
E+S L+ + VL+C K+ SV LLFLSK L+ +RYGF
Sbjct: 954 EDSPLMNLQEVLKCRKSTKSVDHTGLLFLSKHLRKYRYGF 993
>ref|XP_006653694.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like [Oryza
brachyantha]
Length = 1386
Score = 95.9 bits (237), Expect = 5e-18
Identities = 51/100 (51%), Positives = 65/100 (65%)
Frame = -1
Query: 301 IVEFSYDTSQGSIEGNIFNGTCEKKDVECPGLGGHPIGSWVACTISEAAYGALDVPTNSI 122
IV+FSYDTS G + D+E G G P+GSW AC+ISEAAYGALD P N +
Sbjct: 799 IVQFSYDTSDGMYI---------EHDIE--GEPGTPVGSWAACSISEAAYGALDHPVNGL 847
Query: 121 ENSTLLKFKRVLECNKTNSSVKQVALLFLSKRLQDWRYGF 2
E+S L+ + VL+C+K +SV LLFLSK L+ +RYGF
Sbjct: 848 EDSPLMNLQEVLKCHKGTNSVDHTGLLFLSKHLRKYRYGF 887
>emb|CAD41657.3| OSJNBa0019K04.4 [Oryza sativa Japonica Group]
Length = 1664
Score = 95.5 bits (236), Expect = 6e-18
Identities = 49/100 (49%), Positives = 63/100 (63%)
Frame = -1
Query: 301 IVEFSYDTSQGSIEGNIFNGTCEKKDVECPGLGGHPIGSWVACTISEAAYGALDVPTNSI 122
IV FSYDT+ G D + G G P+GSW AC+ISEAAYGALD P NS+
Sbjct: 769 IVRFSYDTADGMYS-----------DHDLEGEPGAPVGSWAACSISEAAYGALDHPVNSL 817
Query: 121 ENSTLLKFKRVLECNKTNSSVKQVALLFLSKRLQDWRYGF 2
E+S L+ + VL+C+K +S+ LLFLSK L+ +RYGF
Sbjct: 818 EDSPLMNLQEVLKCHKGTNSLDHTGLLFLSKHLRKYRYGF 857
>gb|EEE61535.1| hypothetical protein OsJ_15844 [Oryza sativa Japonica Group]
Length = 1623
Score = 95.5 bits (236), Expect = 6e-18
Identities = 49/100 (49%), Positives = 63/100 (63%)
Frame = -1
Query: 301 IVEFSYDTSQGSIEGNIFNGTCEKKDVECPGLGGHPIGSWVACTISEAAYGALDVPTNSI 122
IV FSYDT+ G D + G G P+GSW AC+ISEAAYGALD P NS+
Sbjct: 840 IVRFSYDTADGMYS-----------DHDLEGEPGAPVGSWAACSISEAAYGALDHPVNSL 888
Query: 121 ENSTLLKFKRVLECNKTNSSVKQVALLFLSKRLQDWRYGF 2
E+S L+ + VL+C+K +S+ LLFLSK L+ +RYGF
Sbjct: 889 EDSPLMNLQEVLKCHKGTNSLDHTGLLFLSKHLRKYRYGF 928
>gb|EEC77828.1| hypothetical protein OsI_17044 [Oryza sativa Indica Group]
Length = 1598
Score = 95.5 bits (236), Expect = 6e-18
Identities = 49/100 (49%), Positives = 63/100 (63%)
Frame = -1
Query: 301 IVEFSYDTSQGSIEGNIFNGTCEKKDVECPGLGGHPIGSWVACTISEAAYGALDVPTNSI 122
IV FSYDT+ G D + G G P+GSW AC+ISEAAYGALD P NS+
Sbjct: 819 IVRFSYDTADGMYS-----------DHDLEGEPGAPVGSWAACSISEAAYGALDHPVNSL 867
Query: 121 ENSTLLKFKRVLECNKTNSSVKQVALLFLSKRLQDWRYGF 2
E+S L+ + VL+C+K +S+ LLFLSK L+ +RYGF
Sbjct: 868 EDSPLMNLQEVLKCHKGTNSLDHTGLLFLSKHLRKYRYGF 907
>gb|EEE70198.1| hypothetical protein OsJ_30285 [Oryza sativa Japonica Group]
Length = 1384
Score = 93.6 bits (231), Expect = 2e-17
Identities = 48/100 (48%), Positives = 62/100 (62%)
Frame = -1
Query: 301 IVEFSYDTSQGSIEGNIFNGTCEKKDVECPGLGGHPIGSWVACTISEAAYGALDVPTNSI 122
IV+FSYDT+ G D + G G P+GSW AC+ISEAAYGALD P N++
Sbjct: 823 IVQFSYDTADGM-----------NNDHDLEGEPGAPVGSWAACSISEAAYGALDHPVNAL 871
Query: 121 ENSTLLKFKRVLECNKTNSSVKQVALLFLSKRLQDWRYGF 2
E+S L+ + VL+C+K S LLFLSK L+ +RYGF
Sbjct: 872 EDSPLMNLQEVLKCHKGTKSAVHTGLLFLSKYLKKYRYGF 911
>gb|EEC85033.1| hypothetical protein OsI_32338 [Oryza sativa Indica Group]
Length = 1384
Score = 93.6 bits (231), Expect = 2e-17
Identities = 48/100 (48%), Positives = 62/100 (62%)
Frame = -1
Query: 301 IVEFSYDTSQGSIEGNIFNGTCEKKDVECPGLGGHPIGSWVACTISEAAYGALDVPTNSI 122
IV+FSYDT+ G D + G G P+GSW AC+ISEAAYGALD P N++
Sbjct: 823 IVQFSYDTADGM-----------NNDHDLEGEPGAPVGSWAACSISEAAYGALDHPVNAL 871
Query: 121 ENSTLLKFKRVLECNKTNSSVKQVALLFLSKRLQDWRYGF 2
E+S L+ + VL+C+K S LLFLSK L+ +RYGF
Sbjct: 872 EDSPLMNLQEVLKCHKGTKSAVHTGLLFLSKYLKKYRYGF 911
>emb|CAH66955.1| OSIGBa0147H17.3 [Oryza sativa Indica Group]
Length = 1407
Score = 92.0 bits (227), Expect = 7e-17
Identities = 48/100 (48%), Positives = 62/100 (62%)
Frame = -1
Query: 301 IVEFSYDTSQGSIEGNIFNGTCEKKDVECPGLGGHPIGSWVACTISEAAYGALDVPTNSI 122
IV FSYDT+ G D + G P+GSW AC+ISEAAYGALD P NS+
Sbjct: 846 IVRFSYDTADGMYS-----------DHDLEGEPVAPVGSWAACSISEAAYGALDHPVNSL 894
Query: 121 ENSTLLKFKRVLECNKTNSSVKQVALLFLSKRLQDWRYGF 2
E+S L+ + VL+C+K +S+ LLFLSK L+ +RYGF
Sbjct: 895 EDSPLMNLQEVLKCHKGTNSLDHTGLLFLSKHLRKYRYGF 934
>gb|EMT22317.1| DNA-directed RNA polymerase III subunit RPC1 [Aegilops tauschii]
Length = 1334
Score = 91.7 bits (226), Expect = 9e-17
Identities = 48/99 (48%), Positives = 65/99 (65%)
Frame = -1
Query: 301 IVEFSYDTSQGSIEGNIFNGTCEKKDVECPGLGGHPIGSWVACTISEAAYGALDVPTNSI 122
I++F+YDT++ C ++VE G G P+GSW AC+ISEAAYGALD P NS+
Sbjct: 807 IMQFTYDTAEDM---------CSDRNVE--GELGAPVGSWAACSISEAAYGALDHPVNSL 855
Query: 121 ENSTLLKFKRVLECNKTNSSVKQVALLFLSKRLQDWRYG 5
E S L+ + VL+C K +S+ V LLFLSK L+ +RYG
Sbjct: 856 EESPLMNLQDVLKCQKGGTSMDHVGLLFLSKNLKKYRYG 894
>gb|EMS66983.1| DNA-directed RNA polymerase D subunit 1 [Triticum urartu]
Length = 1402
Score = 91.7 bits (226), Expect = 9e-17
Identities = 48/99 (48%), Positives = 65/99 (65%)
Frame = -1
Query: 301 IVEFSYDTSQGSIEGNIFNGTCEKKDVECPGLGGHPIGSWVACTISEAAYGALDVPTNSI 122
I++F+YDT++ C ++VE G G P+GSW AC+ISEAAYGALD P NS+
Sbjct: 843 IMQFTYDTAEDM---------CSDRNVE--GELGAPVGSWAACSISEAAYGALDHPVNSL 891
Query: 121 ENSTLLKFKRVLECNKTNSSVKQVALLFLSKRLQDWRYG 5
E S L+ + VL+C K +S+ V LLFLSK L+ +RYG
Sbjct: 892 EESPLMNLQDVLKCQKGGTSMDHVGLLFLSKNLKKYRYG 930
>ref|XP_003566523.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like [Brachypodium
distachyon]
Length = 1470
Score = 89.0 bits (219), Expect = 6e-16
Identities = 48/100 (48%), Positives = 64/100 (64%)
Frame = -1
Query: 301 IVEFSYDTSQGSIEGNIFNGTCEKKDVECPGLGGHPIGSWVACTISEAAYGALDVPTNSI 122
IV+F+YDT++ +I+ D G G P+GSW AC+ISEAAYGALD P N I
Sbjct: 884 IVQFTYDTAE-----DIYT------DCGQEGEFGAPVGSWAACSISEAAYGALDHPVNVI 932
Query: 121 ENSTLLKFKRVLECNKTNSSVKQVALLFLSKRLQDWRYGF 2
E+S L+ + VL+C K +S+ LLFLSK L+ +RYGF
Sbjct: 933 EDSPLMNLQEVLKCQKGTNSLDHFGLLFLSKNLKKYRYGF 972
>gb|EMJ12114.1| hypothetical protein PRUPE_ppa000278mg [Prunus persica]
Length = 1356
Score = 87.8 bits (216), Expect = 1e-15
Identities = 45/102 (44%), Positives = 59/102 (57%)
Frame = -1
Query: 307 HHIVEFSYDTSQGSIEGNIFNGTCEKKDVECPGLGGHPIGSWVACTISEAAYGALDVPTN 128
+ +V+FSYD + + + K C G+GG P+GS AC +SEAAY ALD P +
Sbjct: 757 NQLVQFSYDIDMDKSDST--STSHAKSTTACDGIGGQPVGSLSACALSEAAYSALDQPVS 814
Query: 127 SIENSTLLKFKRVLECNKTNSSVKQVALLFLSKRLQDWRYGF 2
+E S LL K +LEC SS KQ LFLSK+L R+GF
Sbjct: 815 LLETSPLLNLKNILECGSKKSSAKQTLSLFLSKKLGRRRHGF 856
>ref|XP_004147993.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like [Cucumis
sativus] gi|449494342|ref|XP_004159519.1| PREDICTED: LOW
QUALITY PROTEIN: DNA-directed RNA polymerase D subunit
1-like [Cucumis sativus]
Length = 1469
Score = 87.4 bits (215), Expect = 2e-15
Identities = 46/102 (45%), Positives = 60/102 (58%)
Frame = -1
Query: 307 HHIVEFSYDTSQGSIEGNIFNGTCEKKDVECPGLGGHPIGSWVACTISEAAYGALDVPTN 128
+ +V+F YD + + E N ++ G+GGHP+GS AC ISEAAY ALD P +
Sbjct: 867 NQLVQFCYDIDRPTSESESENNNRDR------GIGGHPVGSLAACAISEAAYSALDQPIS 920
Query: 127 SIENSTLLKFKRVLECNKTNSSVKQVALLFLSKRLQDWRYGF 2
+E S LL KRVLEC +S KQ LFLS++L YGF
Sbjct: 921 LLEASPLLNLKRVLECGSKRNSTKQTFSLFLSEKLSKRSYGF 962
>ref|XP_004970758.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like isoform X5
[Setaria italica]
Length = 1181
Score = 86.7 bits (213), Expect = 3e-15
Identities = 46/99 (46%), Positives = 62/99 (62%)
Frame = -1
Query: 304 HIVEFSYDTSQGSIEGNIFNGTCEKKDVECPGLGGHPIGSWVACTISEAAYGALDVPTNS 125
HI++FSYDT+ + C D+ G G P+GSW AC+ISEAAYGALD P N
Sbjct: 600 HIMQFSYDTA---------DDMCCNHDLV--GELGAPVGSWAACSISEAAYGALDHPVNG 648
Query: 124 IENSTLLKFKRVLECNKTNSSVKQVALLFLSKRLQDWRY 8
+E+S L+ + V +C+K +S V LLFLSK L+ +RY
Sbjct: 649 LEDSPLMNLQEVFKCHKATNSGDHVGLLFLSKHLKKYRY 687
>ref|XP_004970756.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like isoform X3
[Setaria italica]
Length = 1362
Score = 86.7 bits (213), Expect = 3e-15
Identities = 46/99 (46%), Positives = 62/99 (62%)
Frame = -1
Query: 304 HIVEFSYDTSQGSIEGNIFNGTCEKKDVECPGLGGHPIGSWVACTISEAAYGALDVPTNS 125
HI++FSYDT+ + C D+ G G P+GSW AC+ISEAAYGALD P N
Sbjct: 781 HIMQFSYDTA---------DDMCCNHDLV--GELGAPVGSWAACSISEAAYGALDHPVNG 829
Query: 124 IENSTLLKFKRVLECNKTNSSVKQVALLFLSKRLQDWRY 8
+E+S L+ + V +C+K +S V LLFLSK L+ +RY
Sbjct: 830 LEDSPLMNLQEVFKCHKATNSGDHVGLLFLSKHLKKYRY 868
>ref|XP_004970755.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like isoform X2
[Setaria italica]
Length = 1450
Score = 86.7 bits (213), Expect = 3e-15
Identities = 46/99 (46%), Positives = 62/99 (62%)
Frame = -1
Query: 304 HIVEFSYDTSQGSIEGNIFNGTCEKKDVECPGLGGHPIGSWVACTISEAAYGALDVPTNS 125
HI++FSYDT+ + C D+ G G P+GSW AC+ISEAAYGALD P N
Sbjct: 869 HIMQFSYDTA---------DDMCCNHDLV--GELGAPVGSWAACSISEAAYGALDHPVNG 917
Query: 124 IENSTLLKFKRVLECNKTNSSVKQVALLFLSKRLQDWRY 8
+E+S L+ + V +C+K +S V LLFLSK L+ +RY
Sbjct: 918 LEDSPLMNLQEVFKCHKATNSGDHVGLLFLSKHLKKYRY 956
>ref|XP_004970754.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like isoform X1
[Setaria italica] gi|514785102|ref|XP_004970757.1|
PREDICTED: DNA-directed RNA polymerase D subunit 1-like
isoform X4 [Setaria italica]
Length = 1451
Score = 86.7 bits (213), Expect = 3e-15
Identities = 46/99 (46%), Positives = 62/99 (62%)
Frame = -1
Query: 304 HIVEFSYDTSQGSIEGNIFNGTCEKKDVECPGLGGHPIGSWVACTISEAAYGALDVPTNS 125
HI++FSYDT+ + C D+ G G P+GSW AC+ISEAAYGALD P N
Sbjct: 870 HIMQFSYDTA---------DDMCCNHDLV--GELGAPVGSWAACSISEAAYGALDHPVNG 918
Query: 124 IENSTLLKFKRVLECNKTNSSVKQVALLFLSKRLQDWRY 8
+E+S L+ + V +C+K +S V LLFLSK L+ +RY
Sbjct: 919 LEDSPLMNLQEVFKCHKATNSGDHVGLLFLSKHLKKYRY 957
>ref|XP_004298730.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like [Fragaria
vesca subsp. vesca]
Length = 1438
Score = 81.6 bits (200), Expect = 1e-13
Identities = 44/103 (42%), Positives = 59/103 (57%), Gaps = 1/103 (0%)
Frame = -1
Query: 307 HHIVEFSYDTSQG-SIEGNIFNGTCEKKDVECPGLGGHPIGSWVACTISEAAYGALDVPT 131
+ +++FSYD +G S + N + K + C G P+G+ AC ISEAAY ALD P
Sbjct: 849 NQLIQFSYDIDEGISTADSTTNSSYAKSVINCGG--SQPVGALSACAISEAAYSALDQPV 906
Query: 130 NSIENSTLLKFKRVLECNKTNSSVKQVALLFLSKRLQDWRYGF 2
+ +E S LL K +LEC SS KQ LFLS +L R+GF
Sbjct: 907 SLLEASPLLNLKNILECGSKRSSAKQTMSLFLSDKLDRHRHGF 949
>ref|XP_006358859.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
[Solanum tuberosum]
Length = 1233
Score = 81.3 bits (199), Expect = 1e-13
Identities = 43/102 (42%), Positives = 62/102 (60%)
Frame = -1
Query: 307 HHIVEFSYDTSQGSIEGNIFNGTCEKKDVECPGLGGHPIGSWVACTISEAAYGALDVPTN 128
+ IV+FSY ++ GT + + +GGHP+GS AC ISEAAY ALD P +
Sbjct: 630 NQIVQFSYYEAEKIASTK---GTGDALESHNHAIGGHPVGSLAACAISEAAYSALDQPVS 686
Query: 127 SIENSTLLKFKRVLECNKTNSSVKQVALLFLSKRLQDWRYGF 2
++E+S LL K++LE + S ++ A +FLSKRL W +GF
Sbjct: 687 ALESSPLLNLKKILESGAGSRSGEKTASMFLSKRLGRWAHGF 728
>ref|XP_006358858.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
[Solanum tuberosum]
Length = 1446
Score = 81.3 bits (199), Expect = 1e-13
Identities = 43/102 (42%), Positives = 62/102 (60%)
Frame = -1
Query: 307 HHIVEFSYDTSQGSIEGNIFNGTCEKKDVECPGLGGHPIGSWVACTISEAAYGALDVPTN 128
+ IV+FSY ++ GT + + +GGHP+GS AC ISEAAY ALD P +
Sbjct: 843 NQIVQFSYYEAEKIASTK---GTGDALESHNHAIGGHPVGSLAACAISEAAYSALDQPVS 899
Query: 127 SIENSTLLKFKRVLECNKTNSSVKQVALLFLSKRLQDWRYGF 2
++E+S LL K++LE + S ++ A +FLSKRL W +GF
Sbjct: 900 ALESSPLLNLKKILESGAGSRSGEKTASMFLSKRLGRWAHGF 941