BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00054153
         (240 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006858541.1| hypothetical protein AMTR_s00071p00160560 [A...    98   1e-18
ref|XP_006858537.1| hypothetical protein AMTR_s00071p00160110 [A...    98   1e-18
ref|YP_006273075.1| polyprotein [Fig badnavirus 1] gi|333493962|...    92   9e-17
ref|NP_569153.1| poplyprotein [Citrus yellow mosaic virus] gi|16...    88   1e-15
gb|ACE76864.1| polyprotein [Citrus yellow mosaic virus]                87   2e-15
gb|ACE76858.1| polyprotein [Citrus yellow mosaic virus]                87   3e-15
gb|ACH86211.1| unknown [Citrus yellow mosaic virus]                    87   3e-15
gb|ACB87156.1| polyprotein [Citrus yellow mosaic virus]                87   3e-15
gb|ACB87150.1| polyprotein [Citrus yellow mosaic virus]                87   3e-15
gb|ABQ45369.1| polyprotein [Citrus yellow mosaic virus]                87   3e-15
gb|ABQ45368.1| polyprotein [Citrus yellow mosaic virus]                87   3e-15
gb|ABN15091.1| polyprotein [Citrus yellow mosaic virus]                87   3e-15
gb|ABN15089.1| polyprotein [Citrus yellow mosaic virus]                87   3e-15
gb|ABN15090.1| polyprotein [Citrus yellow mosaic virus]                86   4e-15
gb|AER00538.1| ORF III [Citrus yellow mosaic virus]                    85   1e-14
ref|YP_009002585.1| polyprotein [Hibiscus bacilliform virus GD1]...    84   3e-14
gb|AER00544.1| ORF III [Citrus yellow mosaic virus]                    84   3e-14
gb|AHG32726.1| ORF3, partial [Dioscorea rotundata]                     82   6e-14
gb|AHG32725.1| ORF3, partial [Dioscorea rotundata]                     82   7e-14
gb|AHG94942.1| ORF3, partial [Dioscorea bacilliform virus]             81   1e-13

>ref|XP_006858541.1| hypothetical protein AMTR_s00071p00160560 [Amborella trichopoda]
           gi|548862650|gb|ERN20008.1| hypothetical protein
           AMTR_s00071p00160560 [Amborella trichopoda]
          Length = 759

 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 45/79 (56%), Positives = 59/79 (74%)
 Frame = +1

Query: 4   IPGISNTKV*AILDTGATTCCICKNAMPKEAFEEINYKVLFSGINSQQESSKKLKNGYMT 183
           IPG+S   + AILDTG TTCCI + A+P EA E ++Y V F+ ++S QES  K+KNG MT
Sbjct: 370 IPGLSKFSIQAILDTGCTTCCIDRKAVPAEALEALSYSVTFNCVSSVQESKTKVKNGMMT 429

Query: 184 IGIHKFRIPFTYQLEMNLK 240
           IG H+FRIPFTY ++M +K
Sbjct: 430 IGEHRFRIPFTYAIDMTVK 448


>ref|XP_006858537.1| hypothetical protein AMTR_s00071p00160110 [Amborella trichopoda]
           gi|548862646|gb|ERN20004.1| hypothetical protein
           AMTR_s00071p00160110 [Amborella trichopoda]
          Length = 294

 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 45/79 (56%), Positives = 59/79 (74%)
 Frame = +1

Query: 4   IPGISNTKV*AILDTGATTCCICKNAMPKEAFEEINYKVLFSGINSQQESSKKLKNGYMT 183
           IPG+S   + AILDTG TTCCI + A+P EA E ++Y V F+ ++S QES  K+KNG MT
Sbjct: 27  IPGLSKFSIQAILDTGCTTCCIDRKAVPAEALEALSYSVTFNCVSSVQESKTKVKNGMMT 86

Query: 184 IGIHKFRIPFTYQLEMNLK 240
           IG H+FRIPFTY ++M +K
Sbjct: 87  IGEHRFRIPFTYAIDMTVK 105


>ref|YP_006273075.1| polyprotein [Fig badnavirus 1] gi|333493962|gb|AEF56561.1|
            polyprotein [Fig badnavirus 1]
          Length = 1837

 Score = 91.7 bits (226), Expect = 9e-17
 Identities = 44/77 (57%), Positives = 58/77 (75%)
 Frame = +1

Query: 1    QIPGISNTKV*AILDTGATTCCICKNAMPKEAFEEINYKVLFSGINSQQESSKKLKNGYM 180
            +IP +S  +V AILDTGA+TCCI + A+PKEA EE  Y+V  +G+NS Q++ KKLK G M
Sbjct: 1076 EIPDVSRFRVRAILDTGASTCCINEGAVPKEALEESPYEVQLNGVNSVQKTKKKLKYGRM 1135

Query: 181  TIGIHKFRIPFTYQLEM 231
             IG++ FRIPFTY L +
Sbjct: 1136 MIGMNTFRIPFTYSLPL 1152


>ref|NP_569153.1| poplyprotein [Citrus yellow mosaic virus]
            gi|16416939|gb|AAL18495.1|AF347695_3 unknown [citrus
            yellow mosaic virus]
          Length = 1983

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 44/79 (55%), Positives = 55/79 (69%)
 Frame = +1

Query: 1    QIPGISNTKV*AILDTGATTCCICKNAMPKEAFEEINYKVLFSGINSQQESSKKLKNGYM 180
            +IPGI    V AILDTGATTCCI   ++PK+A EE ++ V FSGINS+Q+  +KLK G M
Sbjct: 1196 EIPGIPAFTVKAILDTGATTCCIDSRSVPKDALEENSFVVNFSGINSKQQVKQKLKTGKM 1255

Query: 181  TIGIHKFRIPFTYQLEMNL 237
             I  H FRIP+ Y  EM +
Sbjct: 1256 FINEHYFRIPYCYSFEMQI 1274


>gb|ACE76864.1| polyprotein [Citrus yellow mosaic virus]
          Length = 1968

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 44/79 (55%), Positives = 55/79 (69%)
 Frame = +1

Query: 1    QIPGISNTKV*AILDTGATTCCICKNAMPKEAFEEINYKVLFSGINSQQESSKKLKNGYM 180
            +IPGI    V AILDTGATTCCI   ++PK+A EE ++ V FSGINS+Q+  +KLK G M
Sbjct: 1181 EIPGIPAFTVKAILDTGATTCCIDSRSVPKDALEENSFVVNFSGINSKQQVKQKLKAGKM 1240

Query: 181  TIGIHKFRIPFTYQLEMNL 237
             I  H FRIP+ Y  EM +
Sbjct: 1241 FINEHYFRIPYCYSFEMQI 1259


>gb|ACE76858.1| polyprotein [Citrus yellow mosaic virus]
          Length = 1967

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 43/79 (54%), Positives = 55/79 (69%)
 Frame = +1

Query: 1    QIPGISNTKV*AILDTGATTCCICKNAMPKEAFEEINYKVLFSGINSQQESSKKLKNGYM 180
            +IPGI    V AILDTGATTCCI   ++PK+A EE ++ V FSGINS+Q+  +K+K G M
Sbjct: 1180 EIPGIPAFTVKAILDTGATTCCIDSRSVPKDALEENSFVVNFSGINSKQQVKQKIKAGKM 1239

Query: 181  TIGIHKFRIPFTYQLEMNL 237
             I  H FRIP+ Y  EM +
Sbjct: 1240 FINEHYFRIPYCYSFEMQI 1258


>gb|ACH86211.1| unknown [Citrus yellow mosaic virus]
          Length = 1490

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 43/79 (54%), Positives = 55/79 (69%)
 Frame = +1

Query: 1   QIPGISNTKV*AILDTGATTCCICKNAMPKEAFEEINYKVLFSGINSQQESSKKLKNGYM 180
           +IPGI    V AILDTGATTCCI   ++PK+A EE ++ V FSGINS+Q+  +K+K G M
Sbjct: 704 EIPGIPAFTVKAILDTGATTCCIDSRSVPKDALEENSFVVNFSGINSKQQVKQKIKAGKM 763

Query: 181 TIGIHKFRIPFTYQLEMNL 237
            I  H FRIP+ Y  EM +
Sbjct: 764 FINEHYFRIPYCYSFEMQI 782


>gb|ACB87156.1| polyprotein [Citrus yellow mosaic virus]
          Length = 1979

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 43/79 (54%), Positives = 55/79 (69%)
 Frame = +1

Query: 1    QIPGISNTKV*AILDTGATTCCICKNAMPKEAFEEINYKVLFSGINSQQESSKKLKNGYM 180
            +IPGI    V AILDTGATTCCI   ++PK+A EE ++ V FSGINS+Q+  +K+K G M
Sbjct: 1190 EIPGIPAFTVKAILDTGATTCCIDSRSVPKDALEENSFVVNFSGINSKQQVKQKIKPGKM 1249

Query: 181  TIGIHKFRIPFTYQLEMNL 237
             I  H FRIP+ Y  EM +
Sbjct: 1250 FISEHYFRIPYCYSFEMQI 1268


>gb|ACB87150.1| polyprotein [Citrus yellow mosaic virus]
          Length = 1976

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 43/79 (54%), Positives = 55/79 (69%)
 Frame = +1

Query: 1    QIPGISNTKV*AILDTGATTCCICKNAMPKEAFEEINYKVLFSGINSQQESSKKLKNGYM 180
            +IPGI    V AILDTGATTCCI   ++PK+A EE ++ V FSGINS+Q+  +K+K G M
Sbjct: 1188 EIPGIPAFTVKAILDTGATTCCIDSRSVPKDALEENSFVVNFSGINSKQQVKQKIKPGKM 1247

Query: 181  TIGIHKFRIPFTYQLEMNL 237
             I  H FRIP+ Y  EM +
Sbjct: 1248 FISEHYFRIPYCYSFEMQI 1266


>gb|ABQ45369.1| polyprotein [Citrus yellow mosaic virus]
          Length = 196

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 43/79 (54%), Positives = 55/79 (69%)
 Frame = +1

Query: 1   QIPGISNTKV*AILDTGATTCCICKNAMPKEAFEEINYKVLFSGINSQQESSKKLKNGYM 180
           +IPGI    V AILDTGATTCCI   ++PK+A EE ++ V FSGINS+Q+  +K+K G M
Sbjct: 11  EIPGIPAFTVKAILDTGATTCCIDSRSVPKDALEENSFVVNFSGINSKQQVKQKIKAGKM 70

Query: 181 TIGIHKFRIPFTYQLEMNL 237
            I  H FRIP+ Y  EM +
Sbjct: 71  FINEHYFRIPYCYSFEMQI 89


>gb|ABQ45368.1| polyprotein [Citrus yellow mosaic virus]
          Length = 207

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 43/79 (54%), Positives = 55/79 (69%)
 Frame = +1

Query: 1   QIPGISNTKV*AILDTGATTCCICKNAMPKEAFEEINYKVLFSGINSQQESSKKLKNGYM 180
           +IPGI    V AILDTGATTCCI   ++PK+A EE ++ V FSGINS+Q+  +K+K G M
Sbjct: 21  EIPGIPAFTVKAILDTGATTCCIDSRSVPKDALEENSFVVNFSGINSKQQVKQKIKAGKM 80

Query: 181 TIGIHKFRIPFTYQLEMNL 237
            I  H FRIP+ Y  EM +
Sbjct: 81  FINEHYFRIPYCYSFEMQI 99


>gb|ABN15091.1| polyprotein [Citrus yellow mosaic virus]
          Length = 161

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 43/79 (54%), Positives = 55/79 (69%)
 Frame = +1

Query: 1   QIPGISNTKV*AILDTGATTCCICKNAMPKEAFEEINYKVLFSGINSQQESSKKLKNGYM 180
           +IPGI    V AILDTGATTCCI   ++PK+A EE ++ V FSGINS+Q+  +K+K G M
Sbjct: 8   EIPGIPAFTVKAILDTGATTCCIDSRSVPKDALEENSFVVNFSGINSKQQVKQKIKAGKM 67

Query: 181 TIGIHKFRIPFTYQLEMNL 237
            I  H FRIP+ Y  EM +
Sbjct: 68  FISEHYFRIPYCYSFEMQI 86


>gb|ABN15089.1| polyprotein [Citrus yellow mosaic virus]
          Length = 226

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 43/79 (54%), Positives = 55/79 (69%)
 Frame = +1

Query: 1   QIPGISNTKV*AILDTGATTCCICKNAMPKEAFEEINYKVLFSGINSQQESSKKLKNGYM 180
           +IPGI    V AILDTGATTCCI   ++PK+A EE ++ V FSGINS+Q+  +K+K G M
Sbjct: 41  EIPGIPAFTVKAILDTGATTCCIDSRSVPKDALEENSFVVNFSGINSKQQVKQKIKAGKM 100

Query: 181 TIGIHKFRIPFTYQLEMNL 237
            I  H FRIP+ Y  EM +
Sbjct: 101 FINEHYFRIPYCYSFEMQI 119


>gb|ABN15090.1| polyprotein [Citrus yellow mosaic virus]
          Length = 226

 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 43/79 (54%), Positives = 55/79 (69%)
 Frame = +1

Query: 1   QIPGISNTKV*AILDTGATTCCICKNAMPKEAFEEINYKVLFSGINSQQESSKKLKNGYM 180
           +IPGI    V AILDTGATTCCI   ++PK+A EE ++ V FSGINS+Q+  +K+K G M
Sbjct: 41  EIPGIPAFTVKAILDTGATTCCIDSRSVPKDALEENSFVVNFSGINSKQQVRQKIKAGKM 100

Query: 181 TIGIHKFRIPFTYQLEMNL 237
            I  H FRIP+ Y  EM +
Sbjct: 101 FINEHYFRIPYCYSFEMQI 119


>gb|AER00538.1| ORF III [Citrus yellow mosaic virus]
          Length = 1982

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 43/79 (54%), Positives = 54/79 (68%)
 Frame = +1

Query: 1    QIPGISNTKV*AILDTGATTCCICKNAMPKEAFEEINYKVLFSGINSQQESSKKLKNGYM 180
            +IPGI    V AILDTGATTCCI   ++PK+A EE ++ V FSGINS+Q+  +KLK G M
Sbjct: 1195 EIPGIPAFTVKAILDTGATTCCIDSRSVPKDALEENSFVVNFSGINSKQQVKQKLKAGKM 1254

Query: 181  TIGIHKFRIPFTYQLEMNL 237
             I  H FRIP+ Y   M +
Sbjct: 1255 FINEHYFRIPYCYSFVMQI 1273


>ref|YP_009002585.1| polyprotein [Hibiscus bacilliform virus GD1]
            gi|584388573|gb|AHI90954.1| polyprotein [Hibiscus
            bacilliform virus GD1]
          Length = 1892

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 42/75 (56%), Positives = 51/75 (68%)
 Frame = +1

Query: 4    IPGISNTKV*AILDTGATTCCICKNAMPKEAFEEINYKVLFSGINSQQESSKKLKNGYMT 183
            IP +    V AILDTGAT+CCI  + +PK A E   ++V F GINS Q+S+KKLK G M 
Sbjct: 1132 IPSVPRFTVKAILDTGATSCCISMDKIPKAAIEPNTFEVTFRGINSVQKSNKKLKYGQMR 1191

Query: 184  IGIHKFRIPFTYQLE 228
            IG H FRIP+TY  E
Sbjct: 1192 IGGHMFRIPYTYCFE 1206


>gb|AER00544.1| ORF III [Citrus yellow mosaic virus]
          Length = 1976

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 41/79 (51%), Positives = 54/79 (68%)
 Frame = +1

Query: 1    QIPGISNTKV*AILDTGATTCCICKNAMPKEAFEEINYKVLFSGINSQQESSKKLKNGYM 180
            +IPGI    V  I DTGATTCCI   ++PK+A EE ++ V FSGINS+Q+  +K+K+G M
Sbjct: 1188 EIPGIPAFTVKTIHDTGATTCCIDSRSVPKDALEENSFVVNFSGINSKQQVKQKIKSGKM 1247

Query: 181  TIGIHKFRIPFTYQLEMNL 237
             I  H FRIP+ Y  EM +
Sbjct: 1248 FINEHYFRIPYCYSFEMQI 1266


>gb|AHG32726.1| ORF3, partial [Dioscorea rotundata]
          Length = 579

 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 41/78 (52%), Positives = 51/78 (65%)
 Frame = +1

Query: 4   IPGISNTKV*AILDTGATTCCICKNAMPKEAFEEINYKVLFSGINSQQESSKKLKNGYMT 183
           IPG    KV AILDTGATTCCI +  +PKE  E+  ++V F+G NS   + KKLK G M 
Sbjct: 24  IPGAVPFKVNAILDTGATTCCINEEGLPKEILEDSTFEVKFTGANSVMTARKKLKYGNMR 83

Query: 184 IGIHKFRIPFTYQLEMNL 237
           IG H FRIP+T+   + L
Sbjct: 84  IGDHHFRIPYTFAFPLKL 101


>gb|AHG32725.1| ORF3, partial [Dioscorea rotundata]
          Length = 1257

 Score = 82.0 bits (201), Expect = 7e-14
 Identities = 39/79 (49%), Positives = 53/79 (67%)
 Frame = +1

Query: 1   QIPGISNTKV*AILDTGATTCCICKNAMPKEAFEEINYKVLFSGINSQQESSKKLKNGYM 180
           +IPG +   V AILDTGAT CCI +  +PKE  EE  ++V  +G NS+  + KKLKNG M
Sbjct: 570 EIPGSAPINVNAILDTGATNCCINEEGLPKEILEENTFEVKLTGANSEMVAKKKLKNGIM 629

Query: 181 TIGIHKFRIPFTYQLEMNL 237
            IG ++FRIP+T+   + L
Sbjct: 630 RIGDNQFRIPYTFAFPLRL 648


>gb|AHG94942.1| ORF3, partial [Dioscorea bacilliform virus]
          Length = 1395

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 41/79 (51%), Positives = 51/79 (64%)
 Frame = +1

Query: 1   QIPGISNTKV*AILDTGATTCCICKNAMPKEAFEEINYKVLFSGINSQQESSKKLKNGYM 180
           +IPG +  KV AILDTGATTCCI    +PKE  E+  +KV F+G NS   + KKLK G M
Sbjct: 709 EIPGCAPLKVNAILDTGATTCCINSEGLPKEMVEDNTFKVKFTGANSVMIAEKKLKYGMM 768

Query: 181 TIGIHKFRIPFTYQLEMNL 237
            I  H FRIP+T+   + L
Sbjct: 769 KIEGHVFRIPYTFAFPLRL 787