BLASTX nr result
ID: Zingiber23_contig00054079
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00054079
(232 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containi... 93 4e-17
emb|CBI30711.3| unnamed protein product [Vitis vinifera] 93 4e-17
gb|EOY27956.1| Pentatricopeptide, putative [Theobroma cacao] 90 3e-16
ref|XP_006414062.1| hypothetical protein EUTSA_v10024377mg [Eutr... 90 4e-16
ref|XP_002305733.2| hypothetical protein POPTR_0004s05810g, part... 90 4e-16
ref|NP_001042337.2| Os01g0205200 [Oryza sativa Japonica Group] g... 88 1e-15
ref|XP_003565478.1| PREDICTED: pentatricopeptide repeat-containi... 88 1e-15
gb|EAY72948.1| hypothetical protein OsI_00820 [Oryza sativa Indi... 88 1e-15
tpg|DAA48104.1| TPA: hypothetical protein ZEAMMB73_530850 [Zea m... 87 3e-15
gb|EMJ15466.1| hypothetical protein PRUPE_ppa025121mg [Prunus pe... 86 4e-15
ref|XP_002445851.1| hypothetical protein SORBIDRAFT_07g026890 [S... 86 5e-15
ref|XP_004973954.1| PREDICTED: pentatricopeptide repeat-containi... 85 1e-14
gb|EXB84044.1| hypothetical protein L484_005808 [Morus notabilis] 84 1e-14
ref|XP_006282442.1| hypothetical protein CARUB_v10004110mg [Caps... 84 1e-14
ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containi... 84 1e-14
gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossyp... 84 1e-14
ref|XP_006467621.1| PREDICTED: pentatricopeptide repeat-containi... 84 2e-14
ref|XP_006449535.1| hypothetical protein CICLE_v10014413mg [Citr... 84 2e-14
gb|AHB18405.1| pentatricopeptide repeat-containing protein [Goss... 83 3e-14
ref|XP_004294643.1| PREDICTED: pentatricopeptide repeat-containi... 83 3e-14
>ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 824
Score = 92.8 bits (229), Expect = 4e-17
Identities = 43/77 (55%), Positives = 55/77 (71%)
Frame = +1
Query: 1 QKNLNCSWIEIKNKVHIFVSSDRSHPKLRKIELFLEEVSRQMETDGSVSKMKYALLSVDC 180
+KN CSWIEIK KVHIFV+ D SHP KIEL L++ +M+ +G KM+YAL+ D
Sbjct: 687 RKNPGCSWIEIKGKVHIFVTGDSSHPLANKIELLLKKTRTRMKEEGHFPKMRYALIKADD 746
Query: 181 ATREEALCGHSEKLAIA 231
+E ALCGHSEK+A+A
Sbjct: 747 TEKEMALCGHSEKIAMA 763
>emb|CBI30711.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 92.8 bits (229), Expect = 4e-17
Identities = 43/77 (55%), Positives = 55/77 (71%)
Frame = +1
Query: 1 QKNLNCSWIEIKNKVHIFVSSDRSHPKLRKIELFLEEVSRQMETDGSVSKMKYALLSVDC 180
+KN CSWIEIK KVHIFV+ D SHP KIEL L++ +M+ +G KM+YAL+ D
Sbjct: 560 RKNPGCSWIEIKGKVHIFVTGDSSHPLANKIELLLKKTRTRMKEEGHFPKMRYALIKADD 619
Query: 181 ATREEALCGHSEKLAIA 231
+E ALCGHSEK+A+A
Sbjct: 620 TEKEMALCGHSEKIAMA 636
>gb|EOY27956.1| Pentatricopeptide, putative [Theobroma cacao]
Length = 874
Score = 90.1 bits (222), Expect = 3e-16
Identities = 42/77 (54%), Positives = 58/77 (75%)
Frame = +1
Query: 1 QKNLNCSWIEIKNKVHIFVSSDRSHPKLRKIELFLEEVSRQMETDGSVSKMKYALLSVDC 180
+KN CSWIEIK KV++FV+ D SHP+ +KIE L+++ R+M+ +G K KYAL++ D
Sbjct: 737 RKNPGCSWIEIKGKVNLFVAGDSSHPQSKKIESLLKKLRRKMKGEGYFPKTKYALINADD 796
Query: 181 ATREEALCGHSEKLAIA 231
+E ALCGHSEKLA+A
Sbjct: 797 MQKEMALCGHSEKLAMA 813
>ref|XP_006414062.1| hypothetical protein EUTSA_v10024377mg [Eutrema salsugineum]
gi|557115232|gb|ESQ55515.1| hypothetical protein
EUTSA_v10024377mg [Eutrema salsugineum]
Length = 872
Score = 89.7 bits (221), Expect = 4e-16
Identities = 43/77 (55%), Positives = 54/77 (70%)
Frame = +1
Query: 1 QKNLNCSWIEIKNKVHIFVSSDRSHPKLRKIELFLEEVSRQMETDGSVSKMKYALLSVDC 180
+KN CSWIEIK KV+IFV+ D SHP+ KIE FL V +M +G + KYAL+ +
Sbjct: 735 RKNPGCSWIEIKGKVNIFVAGDSSHPETEKIEAFLRRVRARMREEGYSPQTKYALIDAEE 794
Query: 181 ATREEALCGHSEKLAIA 231
+EEALCGHSEKLA+A
Sbjct: 795 MEKEEALCGHSEKLAMA 811
>ref|XP_002305733.2| hypothetical protein POPTR_0004s05810g, partial [Populus
trichocarpa] gi|550340410|gb|EEE86244.2| hypothetical
protein POPTR_0004s05810g, partial [Populus trichocarpa]
Length = 778
Score = 89.7 bits (221), Expect = 4e-16
Identities = 39/77 (50%), Positives = 58/77 (75%)
Frame = +1
Query: 1 QKNLNCSWIEIKNKVHIFVSSDRSHPKLRKIELFLEEVSRQMETDGSVSKMKYALLSVDC 180
+KN CSWIE+K+KVHIF++ + SHP+ +KIE+ L+ + +M+ +G K +YAL++ D
Sbjct: 641 KKNPGCSWIEVKSKVHIFLAGNSSHPQAKKIEVLLKRLRSKMKEEGYFPKTRYALINADS 700
Query: 181 ATREEALCGHSEKLAIA 231
+E ALCGHSEKLA+A
Sbjct: 701 LQKETALCGHSEKLAMA 717
>ref|NP_001042337.2| Os01g0205200 [Oryza sativa Japonica Group]
gi|56201494|dbj|BAD72991.1| pentatricopeptide repeat
protein -like [Oryza sativa Japonica Group]
gi|255672984|dbj|BAF04251.2| Os01g0205200 [Oryza sativa
Japonica Group]
Length = 658
Score = 88.2 bits (217), Expect = 1e-15
Identities = 38/77 (49%), Positives = 56/77 (72%)
Frame = +1
Query: 1 QKNLNCSWIEIKNKVHIFVSSDRSHPKLRKIELFLEEVSRQMETDGSVSKMKYALLSVDC 180
++N CSWIE++ K HIF + +R+HP+ +I FL++V+R+M+ +G K KYAL+ D
Sbjct: 521 RENTGCSWIEVRGKAHIFFAENRNHPQGMRIAEFLDDVARRMQEEGHDPKKKYALMGADD 580
Query: 181 ATREEALCGHSEKLAIA 231
A +EALCGHS KLA+A
Sbjct: 581 AVHDEALCGHSSKLAVA 597
>ref|XP_003565478.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Brachypodium distachyon]
Length = 870
Score = 88.2 bits (217), Expect = 1e-15
Identities = 39/77 (50%), Positives = 55/77 (71%)
Frame = +1
Query: 1 QKNLNCSWIEIKNKVHIFVSSDRSHPKLRKIELFLEEVSRQMETDGSVSKMKYALLSVDC 180
++N CSWIE K KVH+F++ +R+HP+ +I FL EV+++M+ +G K KYAL+ D
Sbjct: 733 RENTGCSWIEAKGKVHVFIADNRNHPQGTRIAEFLNEVAKRMQEEGHDPKKKYALMGADN 792
Query: 181 ATREEALCGHSEKLAIA 231
A EALCGHS KLA+A
Sbjct: 793 AVHGEALCGHSSKLAVA 809
>gb|EAY72948.1| hypothetical protein OsI_00820 [Oryza sativa Indica Group]
Length = 370
Score = 88.2 bits (217), Expect = 1e-15
Identities = 38/77 (49%), Positives = 56/77 (72%)
Frame = +1
Query: 1 QKNLNCSWIEIKNKVHIFVSSDRSHPKLRKIELFLEEVSRQMETDGSVSKMKYALLSVDC 180
++N CSWIE++ K HIF + +R+HP+ +I FL++V+R+M+ +G K KYAL+ D
Sbjct: 233 RENTGCSWIEVRGKAHIFFAENRNHPQGMRIAEFLDDVARRMQEEGHDPKKKYALMGADD 292
Query: 181 ATREEALCGHSEKLAIA 231
A +EALCGHS KLA+A
Sbjct: 293 AVHDEALCGHSSKLAVA 309
>tpg|DAA48104.1| TPA: hypothetical protein ZEAMMB73_530850 [Zea mays]
Length = 1091
Score = 86.7 bits (213), Expect = 3e-15
Identities = 37/77 (48%), Positives = 56/77 (72%)
Frame = +1
Query: 1 QKNLNCSWIEIKNKVHIFVSSDRSHPKLRKIELFLEEVSRQMETDGSVSKMKYALLSVDC 180
++N SWIE+++KVH+F++ +R+HP +I FL++V+R+M +G K KYAL+ D
Sbjct: 954 RENTGYSWIEVRSKVHVFIADNRNHPDWNRIAEFLDDVARRMRQEGHDPKKKYALMGADD 1013
Query: 181 ATREEALCGHSEKLAIA 231
A +EALCGHS KLA+A
Sbjct: 1014 AVHDEALCGHSSKLAVA 1030
>gb|EMJ15466.1| hypothetical protein PRUPE_ppa025121mg [Prunus persica]
Length = 796
Score = 86.3 bits (212), Expect = 4e-15
Identities = 42/77 (54%), Positives = 55/77 (71%)
Frame = +1
Query: 1 QKNLNCSWIEIKNKVHIFVSSDRSHPKLRKIELFLEEVSRQMETDGSVSKMKYALLSVDC 180
+KN CSWIEIK KV IFV+ + SHP+ KIE L+ + +M+ +G KM+YAL++ D
Sbjct: 659 KKNPGCSWIEIKGKVQIFVAGNSSHPQATKIESLLKRLRLKMKEEGYSPKMQYALINADE 718
Query: 181 ATREEALCGHSEKLAIA 231
+E ALCGHSEKLAIA
Sbjct: 719 MEKEVALCGHSEKLAIA 735
>ref|XP_002445851.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
gi|241942201|gb|EES15346.1| hypothetical protein
SORBIDRAFT_07g026890 [Sorghum bicolor]
Length = 1084
Score = 85.9 bits (211), Expect = 5e-15
Identities = 35/76 (46%), Positives = 55/76 (72%)
Frame = +1
Query: 1 QKNLNCSWIEIKNKVHIFVSSDRSHPKLRKIELFLEEVSRQMETDGSVSKMKYALLSVDC 180
++N CSWIE++ KVH+F++ +R+HP+ +I FL+ V+R+M +G K KY+L+ +
Sbjct: 947 RENTGCSWIEVRGKVHVFIADNRNHPEWNRIAEFLDHVARRMREEGHDPKKKYSLMGAND 1006
Query: 181 ATREEALCGHSEKLAI 228
A +EALCGHS KLA+
Sbjct: 1007 AVHDEALCGHSSKLAV 1022
>ref|XP_004973954.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Setaria italica]
Length = 1088
Score = 84.7 bits (208), Expect = 1e-14
Identities = 37/77 (48%), Positives = 56/77 (72%)
Frame = +1
Query: 1 QKNLNCSWIEIKNKVHIFVSSDRSHPKLRKIELFLEEVSRQMETDGSVSKMKYALLSVDC 180
++N CSWIE++ KV++FV ++R+HP+ +I FL++V+R+M +G K YAL+ +
Sbjct: 951 RENTGCSWIEVRGKVYVFVPNNRNHPQGNRIAEFLDDVARRMREEGHDPKKNYALMGANN 1010
Query: 181 ATREEALCGHSEKLAIA 231
A +EALCGHS KLAIA
Sbjct: 1011 AVHDEALCGHSSKLAIA 1027
>gb|EXB84044.1| hypothetical protein L484_005808 [Morus notabilis]
Length = 877
Score = 84.3 bits (207), Expect = 1e-14
Identities = 41/77 (53%), Positives = 54/77 (70%)
Frame = +1
Query: 1 QKNLNCSWIEIKNKVHIFVSSDRSHPKLRKIELFLEEVSRQMETDGSVSKMKYALLSVDC 180
+KN CSWIEIK KV+IFV+ D S P +KIE L+ + +M+ +G MKYAL++ D
Sbjct: 740 KKNPGCSWIEIKGKVNIFVAGDDSQPLAKKIESLLKRLRAKMKEEGFYPNMKYALINADE 799
Query: 181 ATREEALCGHSEKLAIA 231
+E ALCGHSEKLA+A
Sbjct: 800 MEKEVALCGHSEKLAMA 816
>ref|XP_006282442.1| hypothetical protein CARUB_v10004110mg [Capsella rubella]
gi|482551147|gb|EOA15340.1| hypothetical protein
CARUB_v10004110mg [Capsella rubella]
Length = 872
Score = 84.3 bits (207), Expect = 1e-14
Identities = 41/77 (53%), Positives = 53/77 (68%)
Frame = +1
Query: 1 QKNLNCSWIEIKNKVHIFVSSDRSHPKLRKIELFLEEVSRQMETDGSVSKMKYALLSVDC 180
+KN CSWIEIK KV+IFV+ D S+P+ +IE FL V +M +G KYAL+ +
Sbjct: 735 RKNPGCSWIEIKGKVNIFVAGDSSNPETEQIEAFLRSVRARMREEGISPLTKYALIDAEE 794
Query: 181 ATREEALCGHSEKLAIA 231
+EEALCGHSEKLA+A
Sbjct: 795 MEKEEALCGHSEKLAMA 811
>ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
gi|449500809|ref|XP_004161200.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 926
Score = 84.3 bits (207), Expect = 1e-14
Identities = 41/77 (53%), Positives = 55/77 (71%)
Frame = +1
Query: 1 QKNLNCSWIEIKNKVHIFVSSDRSHPKLRKIELFLEEVSRQMETDGSVSKMKYALLSVDC 180
+KN CSWIEIK K++IFV+ D S P+ +KIEL L+ + +M+ +G K YALL+ D
Sbjct: 789 KKNPGCSWIEIKGKINIFVAGDCSKPQAKKIELLLKRLRSKMKEEGYSPKTAYALLNADE 848
Query: 181 ATREEALCGHSEKLAIA 231
+E ALCGHSEKLA+A
Sbjct: 849 REKEVALCGHSEKLAMA 865
>gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossypioides kirkii]
Length = 805
Score = 84.3 bits (207), Expect = 1e-14
Identities = 42/78 (53%), Positives = 57/78 (73%), Gaps = 1/78 (1%)
Frame = +1
Query: 1 QKNLNCSWIEIKNKVHIFVSSDRS-HPKLRKIELFLEEVSRQMETDGSVSKMKYALLSVD 177
+KN CSWIEIK KV++FVS + S HP +KIE L+++ R+M+ +G K KYAL++ D
Sbjct: 667 RKNPGCSWIEIKGKVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEGYFPKTKYALINAD 726
Query: 178 CATREEALCGHSEKLAIA 231
+E ALCGHSEKLA+A
Sbjct: 727 EMQKEMALCGHSEKLAMA 744
>ref|XP_006467621.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Citrus sinensis]
Length = 872
Score = 84.0 bits (206), Expect = 2e-14
Identities = 40/77 (51%), Positives = 54/77 (70%)
Frame = +1
Query: 1 QKNLNCSWIEIKNKVHIFVSSDRSHPKLRKIELFLEEVSRQMETDGSVSKMKYALLSVDC 180
+KN CSWIEIK KV+IFV+ SHP +KIE L+ + +M+ +G K +YAL++ D
Sbjct: 735 KKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADE 794
Query: 181 ATREEALCGHSEKLAIA 231
+E ALCGHSEKLA+A
Sbjct: 795 MEKEVALCGHSEKLAMA 811
>ref|XP_006449535.1| hypothetical protein CICLE_v10014413mg [Citrus clementina]
gi|557552146|gb|ESR62775.1| hypothetical protein
CICLE_v10014413mg [Citrus clementina]
Length = 725
Score = 84.0 bits (206), Expect = 2e-14
Identities = 40/77 (51%), Positives = 54/77 (70%)
Frame = +1
Query: 1 QKNLNCSWIEIKNKVHIFVSSDRSHPKLRKIELFLEEVSRQMETDGSVSKMKYALLSVDC 180
+KN CSWIEIK KV+IFV+ SHP +KIE L+ + +M+ +G K +YAL++ D
Sbjct: 588 KKNPGCSWIEIKGKVNIFVAGGSSHPHAKKIESLLKRLRLEMKREGYFPKTRYALINADE 647
Query: 181 ATREEALCGHSEKLAIA 231
+E ALCGHSEKLA+A
Sbjct: 648 MEKEVALCGHSEKLAMA 664
>gb|AHB18405.1| pentatricopeptide repeat-containing protein [Gossypium hirsutum]
Length = 875
Score = 83.2 bits (204), Expect = 3e-14
Identities = 41/78 (52%), Positives = 57/78 (73%), Gaps = 1/78 (1%)
Frame = +1
Query: 1 QKNLNCSWIEIKNKVHIFVSSDRS-HPKLRKIELFLEEVSRQMETDGSVSKMKYALLSVD 177
+KN CSWIEIK +V++FVS + S HP +KIE L+++ R+M+ +G K KYAL++ D
Sbjct: 737 RKNPGCSWIEIKGRVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEGYFPKTKYALINAD 796
Query: 178 CATREEALCGHSEKLAIA 231
+E ALCGHSEKLA+A
Sbjct: 797 EMQKEMALCGHSEKLAMA 814
>ref|XP_004294643.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 870
Score = 83.2 bits (204), Expect = 3e-14
Identities = 41/77 (53%), Positives = 53/77 (68%)
Frame = +1
Query: 1 QKNLNCSWIEIKNKVHIFVSSDRSHPKLRKIELFLEEVSRQMETDGSVSKMKYALLSVDC 180
+KN CSWIEIK KV+IFV+ SHP KIE +++ +M+ DG KM+YAL++ D
Sbjct: 733 KKNPGCSWIEIKGKVNIFVAGGTSHPDAMKIESLVKKFRSRMKEDGYNPKMQYALINADE 792
Query: 181 ATREEALCGHSEKLAIA 231
+E ALC HSEKLAIA
Sbjct: 793 VEKEVALCAHSEKLAIA 809