BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00054041
         (251 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275236.2| PREDICTED: pentatricopeptide repeat-containi...   108   7e-22
emb|CBI26570.3| unnamed protein product [Vitis vinifera]              108   7e-22
emb|CAN76112.1| hypothetical protein VITISV_005527 [Vitis vinifera]   107   1e-21
ref|XP_002309826.2| pentatricopeptide repeat-containing family p...   104   1e-20
gb|EOY10001.1| Pentatricopeptide repeat (PPR) superfamily protei...   104   1e-20
ref|XP_002519997.1| pentatricopeptide repeat-containing protein,...   104   1e-20
ref|XP_006372940.1| hypothetical protein POPTR_0017s06420g [Popu...   102   7e-20
ref|XP_002327945.1| predicted protein [Populus trichocarpa]           102   7e-20
ref|XP_006491812.1| PREDICTED: pentatricopeptide repeat-containi...   100   2e-19
ref|XP_006491807.1| PREDICTED: pentatricopeptide repeat-containi...   100   2e-19
ref|XP_006428510.1| hypothetical protein CICLE_v100138542mg, par...   100   2e-19
ref|XP_004235466.1| PREDICTED: pentatricopeptide repeat-containi...   100   3e-19
ref|XP_006347555.1| PREDICTED: pentatricopeptide repeat-containi...   100   3e-19
ref|XP_006347554.1| PREDICTED: pentatricopeptide repeat-containi...   100   3e-19
gb|EMJ07903.1| hypothetical protein PRUPE_ppa023974mg [Prunus pe...   100   3e-19
ref|XP_004298102.1| PREDICTED: pentatricopeptide repeat-containi...    99   6e-19
ref|XP_006590462.1| PREDICTED: pentatricopeptide repeat-containi...    98   1e-18
gb|ESW29011.1| hypothetical protein PHAVU_002G036500g [Phaseolus...    98   1e-18
ref|XP_006878653.1| hypothetical protein AMTR_s00011p00265800 [A...    97   2e-18
gb|EXB97274.1| hypothetical protein L484_024135 [Morus notabilis]      97   3e-18

>ref|XP_002275236.2| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
           chloroplastic-like [Vitis vinifera]
          Length = 1442

 Score =  108 bits (270), Expect = 7e-22
 Identities = 56/82 (68%), Positives = 69/82 (84%)
 Frame = -2

Query: 250 LAIIISILGRAHQDALAAEVFQLSFPDEATDISVQVYNAMMGVYARTGKFTKVQELLGLM 71
           LA I+S+LG+A+Q+ALA E+F  +  + A+  +VQVYNAMMGVYARTG+FTKVQELL LM
Sbjct: 191 LATILSVLGKANQEALAVEIFARA--EAASGNTVQVYNAMMGVYARTGRFTKVQELLDLM 248

Query: 70  RDRGLEPDLVSFNTLINAKAKA 5
           R RG EPDLVSFNTLINA+ K+
Sbjct: 249 RSRGCEPDLVSFNTLINARLKS 270


>emb|CBI26570.3| unnamed protein product [Vitis vinifera]
          Length = 1042

 Score =  108 bits (270), Expect = 7e-22
 Identities = 56/82 (68%), Positives = 69/82 (84%)
 Frame = -2

Query: 250 LAIIISILGRAHQDALAAEVFQLSFPDEATDISVQVYNAMMGVYARTGKFTKVQELLGLM 71
           LA I+S+LG+A+Q+ALA E+F  +  + A+  +VQVYNAMMGVYARTG+FTKVQELL LM
Sbjct: 166 LATILSVLGKANQEALAVEIFARA--EAASGNTVQVYNAMMGVYARTGRFTKVQELLDLM 223

Query: 70  RDRGLEPDLVSFNTLINAKAKA 5
           R RG EPDLVSFNTLINA+ K+
Sbjct: 224 RSRGCEPDLVSFNTLINARLKS 245


>emb|CAN76112.1| hypothetical protein VITISV_005527 [Vitis vinifera]
          Length = 1494

 Score =  107 bits (268), Expect = 1e-21
 Identities = 56/82 (68%), Positives = 68/82 (82%)
 Frame = -2

Query: 250 LAIIISILGRAHQDALAAEVFQLSFPDEATDISVQVYNAMMGVYARTGKFTKVQELLGLM 71
           LA I+S+LG+A+Q+ALA E+F  +  + A   +VQVYNAMMGVYARTG+FTKVQELL LM
Sbjct: 223 LATILSVLGKANQEALAVEIFARA--EAAXGNTVQVYNAMMGVYARTGRFTKVQELLDLM 280

Query: 70  RDRGLEPDLVSFNTLINAKAKA 5
           R RG EPDLVSFNTLINA+ K+
Sbjct: 281 RSRGCEPDLVSFNTLINARLKS 302


>ref|XP_002309826.2| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550333963|gb|EEE90276.2|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 1484

 Score =  104 bits (260), Expect = 1e-20
 Identities = 54/82 (65%), Positives = 66/82 (80%)
 Frame = -2

Query: 250 LAIIISILGRAHQDALAAEVFQLSFPDEATDISVQVYNAMMGVYARTGKFTKVQELLGLM 71
           L+ I+S+LG+A+Q+ALA EVF  + P      +VQVYNAMMGVYAR G+F KVQELL LM
Sbjct: 227 LSTILSVLGKANQEALAVEVFMRAEPSAGN--TVQVYNAMMGVYARRGRFNKVQELLDLM 284

Query: 70  RDRGLEPDLVSFNTLINAKAKA 5
           R+RG +PDLVSFNTLINA+ KA
Sbjct: 285 RERGCKPDLVSFNTLINARLKA 306


>gb|EOY10001.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
           cacao]
          Length = 1458

 Score =  104 bits (259), Expect = 1e-20
 Identities = 55/82 (67%), Positives = 65/82 (79%)
 Frame = -2

Query: 250 LAIIISILGRAHQDALAAEVFQLSFPDEATDISVQVYNAMMGVYARTGKFTKVQELLGLM 71
           LA I+++LG+A+Q  LA E+F  + P  A   +VQVYNAMMGVYAR G+F KVQELL LM
Sbjct: 213 LATILAVLGKANQGVLAVEIFTRAEP--AVGNTVQVYNAMMGVYARNGRFQKVQELLDLM 270

Query: 70  RDRGLEPDLVSFNTLINAKAKA 5
           R+RG EPDLVSFNTLINAK KA
Sbjct: 271 RERGCEPDLVSFNTLINAKLKA 292


>ref|XP_002519997.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540761|gb|EEF42321.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 1429

 Score =  104 bits (259), Expect = 1e-20
 Identities = 53/82 (64%), Positives = 67/82 (81%)
 Frame = -2

Query: 250 LAIIISILGRAHQDALAAEVFQLSFPDEATDISVQVYNAMMGVYARTGKFTKVQELLGLM 71
           LA I+++LG+A+Q+ALA E+F  +  +   D +VQVYNAMMGVYARTG+F KVQ +L LM
Sbjct: 179 LATILAVLGKANQEALAVEIFIRA--ESTVDNTVQVYNAMMGVYARTGRFNKVQGMLDLM 236

Query: 70  RDRGLEPDLVSFNTLINAKAKA 5
           R+RG EPDLVSFNTLINA+ KA
Sbjct: 237 RERGCEPDLVSFNTLINARLKA 258


>ref|XP_006372940.1| hypothetical protein POPTR_0017s06420g [Populus trichocarpa]
           gi|566211778|ref|XP_006372941.1| pentatricopeptide
           repeat-containing family protein [Populus trichocarpa]
           gi|550319588|gb|ERP50737.1| hypothetical protein
           POPTR_0017s06420g [Populus trichocarpa]
           gi|550319589|gb|ERP50738.1| pentatricopeptide
           repeat-containing family protein [Populus trichocarpa]
          Length = 1465

 Score =  102 bits (253), Expect = 7e-20
 Identities = 52/82 (63%), Positives = 67/82 (81%)
 Frame = -2

Query: 250 LAIIISILGRAHQDALAAEVFQLSFPDEATDISVQVYNAMMGVYARTGKFTKVQELLGLM 71
           L+ I+++LG+A+Q+ LA EVF  + P  + + +V+VYNAMMGVYAR+GKF KVQEL  LM
Sbjct: 229 LSTILAVLGKANQEPLAVEVFTRAEP--SVENTVKVYNAMMGVYARSGKFNKVQELFDLM 286

Query: 70  RDRGLEPDLVSFNTLINAKAKA 5
           R+RG EPDLVSFNTLINA+ KA
Sbjct: 287 RERGCEPDLVSFNTLINARLKA 308


>ref|XP_002327945.1| predicted protein [Populus trichocarpa]
          Length = 1450

 Score =  102 bits (253), Expect = 7e-20
 Identities = 52/82 (63%), Positives = 67/82 (81%)
 Frame = -2

Query: 250 LAIIISILGRAHQDALAAEVFQLSFPDEATDISVQVYNAMMGVYARTGKFTKVQELLGLM 71
           L+ I+++LG+A+Q+ LA EVF  + P  + + +V+VYNAMMGVYAR+GKF KVQEL  LM
Sbjct: 225 LSTILAVLGKANQEPLAVEVFTRAEP--SVENTVKVYNAMMGVYARSGKFNKVQELFDLM 282

Query: 70  RDRGLEPDLVSFNTLINAKAKA 5
           R+RG EPDLVSFNTLINA+ KA
Sbjct: 283 RERGCEPDLVSFNTLINARLKA 304


>ref|XP_006491812.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
           chloroplastic-like isoform X6 [Citrus sinensis]
          Length = 1278

 Score =  100 bits (250), Expect = 2e-19
 Identities = 51/82 (62%), Positives = 65/82 (79%)
 Frame = -2

Query: 250 LAIIISILGRAHQDALAAEVFQLSFPDEATDISVQVYNAMMGVYARTGKFTKVQELLGLM 71
           LA I+++LG+A+Q+ LA E F  +  + A D +VQVYNAMMG+YAR G+F KVQELL LM
Sbjct: 210 LATILAVLGKANQENLAVETFMRA--ESAVDDTVQVYNAMMGIYARNGRFQKVQELLDLM 267

Query: 70  RDRGLEPDLVSFNTLINAKAKA 5
           R RG EPDLVSFNTLINA+ ++
Sbjct: 268 RKRGCEPDLVSFNTLINARLRS 289


>ref|XP_006491807.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
           chloroplastic-like isoform X1 [Citrus sinensis]
           gi|568877582|ref|XP_006491808.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g18110,
           chloroplastic-like isoform X2 [Citrus sinensis]
           gi|568877584|ref|XP_006491809.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g18110,
           chloroplastic-like isoform X3 [Citrus sinensis]
           gi|568877586|ref|XP_006491810.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g18110,
           chloroplastic-like isoform X4 [Citrus sinensis]
           gi|568877588|ref|XP_006491811.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g18110,
           chloroplastic-like isoform X5 [Citrus sinensis]
          Length = 1459

 Score =  100 bits (250), Expect = 2e-19
 Identities = 51/82 (62%), Positives = 65/82 (79%)
 Frame = -2

Query: 250 LAIIISILGRAHQDALAAEVFQLSFPDEATDISVQVYNAMMGVYARTGKFTKVQELLGLM 71
           LA I+++LG+A+Q+ LA E F  +  + A D +VQVYNAMMG+YAR G+F KVQELL LM
Sbjct: 210 LATILAVLGKANQENLAVETFMRA--ESAVDDTVQVYNAMMGIYARNGRFQKVQELLDLM 267

Query: 70  RDRGLEPDLVSFNTLINAKAKA 5
           R RG EPDLVSFNTLINA+ ++
Sbjct: 268 RKRGCEPDLVSFNTLINARLRS 289


>ref|XP_006428510.1| hypothetical protein CICLE_v100138542mg, partial [Citrus
           clementina] gi|557530567|gb|ESR41750.1| hypothetical
           protein CICLE_v100138542mg, partial [Citrus clementina]
          Length = 1110

 Score =  100 bits (250), Expect = 2e-19
 Identities = 51/82 (62%), Positives = 65/82 (79%)
 Frame = -2

Query: 250 LAIIISILGRAHQDALAAEVFQLSFPDEATDISVQVYNAMMGVYARTGKFTKVQELLGLM 71
           LA I+++LG+A+Q+ LA E F  +  + A D +VQVYNAMMG+YAR G+F KVQELL LM
Sbjct: 83  LATILAVLGKANQENLAVETFMRA--ESAVDDTVQVYNAMMGIYARNGRFQKVQELLDLM 140

Query: 70  RDRGLEPDLVSFNTLINAKAKA 5
           R RG EPDLVSFNTLINA+ ++
Sbjct: 141 RKRGCEPDLVSFNTLINARLRS 162


>ref|XP_004235466.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
           chloroplastic-like [Solanum lycopersicum]
          Length = 1464

 Score =  100 bits (248), Expect = 3e-19
 Identities = 49/82 (59%), Positives = 69/82 (84%)
 Frame = -2

Query: 250 LAIIISILGRAHQDALAAEVFQLSFPDEATDISVQVYNAMMGVYARTGKFTKVQELLGLM 71
           LA I+++LG+A+Q+ALA E+F  +  +++   +VQVYN+MMGVYAR G+F++VQ+LL LM
Sbjct: 229 LATILAVLGKANQEALAVEIFMRA--EQSIGNTVQVYNSMMGVYARNGRFSQVQQLLELM 286

Query: 70  RDRGLEPDLVSFNTLINAKAKA 5
            +RGLEPDLVSFNTLINA+ K+
Sbjct: 287 HERGLEPDLVSFNTLINARLKS 308


>ref|XP_006347555.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
           chloroplastic-like isoform X2 [Solanum tuberosum]
          Length = 1277

 Score = 99.8 bits (247), Expect = 3e-19
 Identities = 48/82 (58%), Positives = 69/82 (84%)
 Frame = -2

Query: 250 LAIIISILGRAHQDALAAEVFQLSFPDEATDISVQVYNAMMGVYARTGKFTKVQELLGLM 71
           LA I+++LG+A+Q+ALA E+F  +  +++   +VQVYN+MMGVYAR G+F++VQ+LL LM
Sbjct: 228 LATILAVLGKANQEALAVEIFMRA--EQSIGNTVQVYNSMMGVYARNGRFSRVQQLLELM 285

Query: 70  RDRGLEPDLVSFNTLINAKAKA 5
            +RG+EPDLVSFNTLINA+ K+
Sbjct: 286 HERGIEPDLVSFNTLINARLKS 307


>ref|XP_006347554.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
           chloroplastic-like isoform X1 [Solanum tuberosum]
          Length = 1476

 Score = 99.8 bits (247), Expect = 3e-19
 Identities = 48/82 (58%), Positives = 69/82 (84%)
 Frame = -2

Query: 250 LAIIISILGRAHQDALAAEVFQLSFPDEATDISVQVYNAMMGVYARTGKFTKVQELLGLM 71
           LA I+++LG+A+Q+ALA E+F  +  +++   +VQVYN+MMGVYAR G+F++VQ+LL LM
Sbjct: 228 LATILAVLGKANQEALAVEIFMRA--EQSIGNTVQVYNSMMGVYARNGRFSRVQQLLELM 285

Query: 70  RDRGLEPDLVSFNTLINAKAKA 5
            +RG+EPDLVSFNTLINA+ K+
Sbjct: 286 HERGIEPDLVSFNTLINARLKS 307


>gb|EMJ07903.1| hypothetical protein PRUPE_ppa023974mg [Prunus persica]
          Length = 1353

 Score = 99.8 bits (247), Expect = 3e-19
 Identities = 51/82 (62%), Positives = 64/82 (78%)
 Frame = -2

Query: 250 LAIIISILGRAHQDALAAEVFQLSFPDEATDISVQVYNAMMGVYARTGKFTKVQELLGLM 71
           LA I+++LG+A Q+ALA E+F  + P      +VQVYNAMMGVYAR G+F KVQELL LM
Sbjct: 83  LATILAVLGKASQEALAVEIFTRAEPGIGN--TVQVYNAMMGVYARNGRFNKVQELLNLM 140

Query: 70  RDRGLEPDLVSFNTLINAKAKA 5
           R+RG EPDLVS NTLINA+ ++
Sbjct: 141 RERGCEPDLVSLNTLINARLRS 162


>ref|XP_004298102.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
           chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 1496

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 49/82 (59%), Positives = 66/82 (80%)
 Frame = -2

Query: 250 LAIIISILGRAHQDALAAEVFQLSFPDEATDISVQVYNAMMGVYARTGKFTKVQELLGLM 71
           LA I+++LG+A+Q+ALA E++  + P+     +VQVYNAMMGVYAR G+F +VQELL LM
Sbjct: 233 LATILAVLGKANQEALAVEIYTRAEPEIGN--TVQVYNAMMGVYARNGRFKRVQELLNLM 290

Query: 70  RDRGLEPDLVSFNTLINAKAKA 5
           R+RG EPDLVS NTLINA+ ++
Sbjct: 291 RERGCEPDLVSLNTLINARLRS 312


>ref|XP_006590462.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
           chloroplastic-like [Glycine max]
          Length = 1487

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 49/82 (59%), Positives = 66/82 (80%)
 Frame = -2

Query: 250 LAIIISILGRAHQDALAAEVFQLSFPDEATDISVQVYNAMMGVYARTGKFTKVQELLGLM 71
           +A I+ +LG+A+Q+ALA E+F  +  + +   +VQVYNAMMGVYAR G+F+KV+ELL LM
Sbjct: 218 VATILGVLGKANQEALAVEIFARA--ESSVGDTVQVYNAMMGVYARNGRFSKVKELLDLM 275

Query: 70  RDRGLEPDLVSFNTLINAKAKA 5
           R+RG  PDLVSFNTLINA+ K+
Sbjct: 276 RERGCVPDLVSFNTLINARMKS 297


>gb|ESW29011.1| hypothetical protein PHAVU_002G036500g [Phaseolus vulgaris]
          Length = 1484

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 49/82 (59%), Positives = 66/82 (80%)
 Frame = -2

Query: 250 LAIIISILGRAHQDALAAEVFQLSFPDEATDISVQVYNAMMGVYARTGKFTKVQELLGLM 71
           +A I+ +LG+A+Q+ALA E+F  +  + +   +VQVYNAMMGVYAR+G+F KV+ELL LM
Sbjct: 215 VATILGVLGKANQEALAVEIFTRA--ESSVGDTVQVYNAMMGVYARSGRFNKVKELLDLM 272

Query: 70  RDRGLEPDLVSFNTLINAKAKA 5
           R+RG  PDLVSFNTLINA+ K+
Sbjct: 273 RERGCVPDLVSFNTLINARMKS 294


>ref|XP_006878653.1| hypothetical protein AMTR_s00011p00265800 [Amborella trichopoda]
           gi|548831996|gb|ERM94798.1| hypothetical protein
           AMTR_s00011p00265800 [Amborella trichopoda]
          Length = 1522

 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 51/83 (61%), Positives = 63/83 (75%)
 Frame = -2

Query: 250 LAIIISILGRAHQDALAAEVFQLSFPDEATDISVQVYNAMMGVYARTGKFTKVQELLGLM 71
           LA I+++LG+A+Q+ LA  +F  + P+      VQVYN+MMGVYAR G+F   QELL LM
Sbjct: 265 LATILAVLGKANQETLAEAIFSRAKPEIGN--VVQVYNSMMGVYARQGRFDDAQELLKLM 322

Query: 70  RDRGLEPDLVSFNTLINAKAKAR 2
           R RG EPDLVSFNTLINA+AKAR
Sbjct: 323 RRRGCEPDLVSFNTLINARAKAR 345


>gb|EXB97274.1| hypothetical protein L484_024135 [Morus notabilis]
          Length = 1494

 Score = 96.7 bits (239), Expect = 3e-18
 Identities = 50/82 (60%), Positives = 63/82 (76%)
 Frame = -2

Query: 250 LAIIISILGRAHQDALAAEVFQLSFPDEATDISVQVYNAMMGVYARTGKFTKVQELLGLM 71
           LA I+++LG+A+Q  LA E+F  + PD     +VQVYNAMMG+ AR G+F KV ELL LM
Sbjct: 233 LATILAVLGKANQVGLAIEIFTRAEPDIGN--TVQVYNAMMGIQARAGRFDKVHELLDLM 290

Query: 70  RDRGLEPDLVSFNTLINAKAKA 5
           R+RG EPDLVSFNTLINA+ K+
Sbjct: 291 RERGCEPDLVSFNTLINARLKS 312