BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00054037
         (234 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006660042.1| PREDICTED: pentatricopeptide repeat-containi...    99   5e-19
ref|XP_002458168.1| hypothetical protein SORBIDRAFT_03g028130 [S...    96   4e-18
tpg|DAA58542.1| TPA: hypothetical protein ZEAMMB73_802520 [Zea m...    95   8e-18
ref|XP_002306238.1| hypothetical protein POPTR_0005s06190g [Popu...    77   3e-12
ref|XP_004301257.1| PREDICTED: pentatricopeptide repeat-containi...    76   4e-12
gb|AGY35718.1| SMK1 [Zea mays]                                         75   9e-12
tpg|DAA41672.1| TPA: hypothetical protein ZEAMMB73_535355 [Zea m...    75   9e-12
ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containi...    74   2e-11
ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containi...    74   2e-11
ref|NP_001150970.1| vegetative storage protein [Zea mays] gi|195...    74   2e-11
ref|XP_004971848.1| PREDICTED: putative pentatricopeptide repeat...    74   3e-11
ref|XP_006660540.1| PREDICTED: pentatricopeptide repeat-containi...    73   3e-11
ref|NP_567948.1| pentatricopeptide repeat-containing protein [Ar...    73   3e-11
emb|CAA19881.1| putative protein [Arabidopsis thaliana] gi|72703...    73   3e-11
ref|XP_004978275.1| PREDICTED: pentatricopeptide repeat-containi...    73   5e-11
ref|NP_195434.1| pentatricopeptide repeat-containing protein [Ar...    73   5e-11
ref|XP_006580405.1| PREDICTED: pentatricopeptide repeat-containi...    72   6e-11
ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containi...    72   6e-11
ref|XP_002869013.1| pentatricopeptide repeat-containing protein ...    72   6e-11
gb|ESW32505.1| hypothetical protein PHAVU_002G328000g [Phaseolus...    72   8e-11

>ref|XP_006660042.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Oryza brachyantha]
          Length = 700

 Score = 99.4 bits (246), Expect = 5e-19
 Identities = 47/76 (61%), Positives = 55/76 (72%)
 Frame = +3

Query: 3   NACAYSSCLRQGMALHGRMVKSGFCSSCPIVQNSLMDAYGKCGCVEDAQTVFEEVRHKDV 182
           NAC+++  L Q MALHG+M+K G C S     NSLM AYGKCG +E AQ VF+E   KDV
Sbjct: 423 NACSFACYLGQSMALHGQMMKMGLCDSYVDDMNSLMSAYGKCGLLEAAQKVFDETNPKDV 482

Query: 183 ISWNTIISCYGFSARP 230
           ISWN IISCYG+SA P
Sbjct: 483 ISWNIIISCYGYSALP 498


>ref|XP_002458168.1| hypothetical protein SORBIDRAFT_03g028130 [Sorghum bicolor]
           gi|241930143|gb|EES03288.1| hypothetical protein
           SORBIDRAFT_03g028130 [Sorghum bicolor]
          Length = 694

 Score = 96.3 bits (238), Expect = 4e-18
 Identities = 43/77 (55%), Positives = 55/77 (71%)
 Frame = +3

Query: 3   NACAYSSCLRQGMALHGRMVKSGFCSSCPIVQNSLMDAYGKCGCVEDAQTVFEEVRHKDV 182
           NAC+++   R  MALHG+M++ G C S     NSLMDAYGKCG +++AQ +F+E   KD 
Sbjct: 407 NACSFTCNHRTVMALHGQMIRMGLCHSYVDDMNSLMDAYGKCGFIDEAQNIFDETDRKDT 466

Query: 183 ISWNTIISCYGFSARPQ 233
           ISWN IISCYG+S  PQ
Sbjct: 467 ISWNIIISCYGYSGFPQ 483


>tpg|DAA58542.1| TPA: hypothetical protein ZEAMMB73_802520 [Zea mays]
          Length = 696

 Score = 95.1 bits (235), Expect = 8e-18
 Identities = 42/77 (54%), Positives = 54/77 (70%)
 Frame = +3

Query: 3   NACAYSSCLRQGMALHGRMVKSGFCSSCPIVQNSLMDAYGKCGCVEDAQTVFEEVRHKDV 182
           NAC+++   R  MALHG+M++ G C S     NSLMDAYGKCG + +AQ +F+E   KD 
Sbjct: 411 NACSFACNHRTVMALHGQMIRMGLCHSYVDDMNSLMDAYGKCGFIAEAQKIFDETERKDT 470

Query: 183 ISWNTIISCYGFSARPQ 233
           +SWN IISCYG+S  PQ
Sbjct: 471 VSWNIIISCYGYSGFPQ 487


>ref|XP_002306238.1| hypothetical protein POPTR_0005s06190g [Populus trichocarpa]
           gi|222855687|gb|EEE93234.1| hypothetical protein
           POPTR_0005s06190g [Populus trichocarpa]
          Length = 512

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 32/77 (41%), Positives = 49/77 (63%)
 Frame = +3

Query: 3   NACAYSSCLRQGMALHGRMVKSGFCSSCPIVQNSLMDAYGKCGCVEDAQTVFEEVRHKDV 182
           NAC     L +G  +HGR+VKS   +   ++ NSL+D Y +CGC+ D++ VF  +R  +V
Sbjct: 216 NACGGEGDLMKGKEIHGRVVKSTLFNVDVVISNSLIDMYARCGCLNDSEKVFRNMRSLNV 275

Query: 183 ISWNTIISCYGFSARPQ 233
           ++W T+ISCYG   R +
Sbjct: 276 VTWTTMISCYGVHGRAE 292


>ref|XP_004301257.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Fragaria vesca subsp. vesca]
          Length = 780

 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 39/82 (47%), Positives = 53/82 (64%), Gaps = 8/82 (9%)
 Frame = +3

Query: 6   ACAYSSC-----LRQGMALHGRMVKSGFCSSCPIVQNSLMDAYGKCGCVEDAQTVFEEVR 170
           +CA S+C     L  G  LHGR+ K+GF S C  V N+L+  Y KCGC+E+A  VF+E+ 
Sbjct: 412 SCALSTCAEVAALELGKQLHGRLAKAGFESGC-YVGNALLGMYCKCGCIEEAYDVFQEIS 470

Query: 171 HKDVISWNTIISCY---GFSAR 227
            KDV+SWNT+I  Y   GF ++
Sbjct: 471 EKDVVSWNTMIHGYARHGFGSK 492


>gb|AGY35718.1| SMK1 [Zea mays]
          Length = 506

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 34/71 (47%), Positives = 47/71 (66%)
 Frame = +3

Query: 3   NACAYSSCLRQGMALHGRMVKSGFCSSCPIVQNSLMDAYGKCGCVEDAQTVFEEVRHKDV 182
           N CA    L +G  +HGRM +    SS  +V N+L+D YGKCG V+ AQ VF  +  K+V
Sbjct: 218 NVCADEGQLMKGREIHGRMARCLASSSDTVVGNALIDMYGKCGQVDGAQAVFASMEEKNV 277

Query: 183 ISWNTIISCYG 215
           +SW+++ISCYG
Sbjct: 278 VSWSSLISCYG 288


>tpg|DAA41672.1| TPA: hypothetical protein ZEAMMB73_535355 [Zea mays]
          Length = 502

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 34/71 (47%), Positives = 47/71 (66%)
 Frame = +3

Query: 3   NACAYSSCLRQGMALHGRMVKSGFCSSCPIVQNSLMDAYGKCGCVEDAQTVFEEVRHKDV 182
           N CA    L +G  +HGRM +    SS  +V N+L+D YGKCG V+ AQ VF  +  K+V
Sbjct: 214 NVCADEGQLMKGREIHGRMARCLASSSDTVVGNALIDMYGKCGQVDGAQAVFASMEEKNV 273

Query: 183 ISWNTIISCYG 215
           +SW+++ISCYG
Sbjct: 274 VSWSSLISCYG 284


>ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Cucumis sativus]
          Length = 776

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 37/74 (50%), Positives = 50/74 (67%), Gaps = 5/74 (6%)
 Frame = +3

Query: 6   ACAYSSC-----LRQGMALHGRMVKSGFCSSCPIVQNSLMDAYGKCGCVEDAQTVFEEVR 170
           ACA SSC     L  G  LHGR+VK+GF +   I  N+L+  YGKCG +E+A  VFE++ 
Sbjct: 409 ACALSSCAEIAALELGKQLHGRLVKAGFQTGY-IAGNALLAMYGKCGSIEEAFDVFEDIT 467

Query: 171 HKDVISWNTIISCY 212
            KD++SWNT+I+ Y
Sbjct: 468 EKDIVSWNTMIAGY 481


>ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Cucumis sativus]
          Length = 776

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 37/74 (50%), Positives = 50/74 (67%), Gaps = 5/74 (6%)
 Frame = +3

Query: 6   ACAYSSC-----LRQGMALHGRMVKSGFCSSCPIVQNSLMDAYGKCGCVEDAQTVFEEVR 170
           ACA SSC     L  G  LHGR+VK+GF +   I  N+L+  YGKCG +E+A  VFE++ 
Sbjct: 409 ACALSSCAEIAALELGKQLHGRLVKAGFQTGY-IAGNALLAMYGKCGSIEEAFDVFEDIT 467

Query: 171 HKDVISWNTIISCY 212
            KD++SWNT+I+ Y
Sbjct: 468 EKDIVSWNTMIAGY 481


>ref|NP_001150970.1| vegetative storage protein [Zea mays] gi|195643272|gb|ACG41104.1|
           vegetative storage protein [Zea mays]
          Length = 322

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 34/77 (44%), Positives = 49/77 (63%)
 Frame = +3

Query: 3   NACAYSSCLRQGMALHGRMVKSGFCSSCPIVQNSLMDAYGKCGCVEDAQTVFEEVRHKDV 182
           +AC   + L+QGM  H ++  +GF +   +V+NSL+D Y KCGCV+ A+ VFE V   D 
Sbjct: 233 DACGELALLKQGMQAHAQVAGNGFEADV-VVRNSLVDMYAKCGCVDSAELVFEAVSSNDA 291

Query: 183 ISWNTIISCYGFSARPQ 233
           + W T++S YG S R Q
Sbjct: 292 VLWTTMVSAYGKSGRAQ 308


>ref|XP_004971848.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Setaria italica]
          Length = 825

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 35/74 (47%), Positives = 49/74 (66%)
 Frame = +3

Query: 6   ACAYSSCLRQGMALHGRMVKSGFCSSCPIVQNSLMDAYGKCGCVEDAQTVFEEVRHKDVI 185
           ACA ++ ++  + +H  + KS F +S  +V NSL+D Y KCGC++DAQ VFE ++  DVI
Sbjct: 462 ACASTASIKHAVQIHSLIEKSTF-NSDTVVCNSLVDTYAKCGCIKDAQKVFEAIKQCDVI 520

Query: 186 SWNTIISCYGFSAR 227
           SWN IIS Y    R
Sbjct: 521 SWNAIISGYALHGR 534



 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 32/71 (45%), Positives = 45/71 (63%)
 Frame = +3

Query: 9   CAYSSCLRQGMALHGRMVKSGFCSSCPIVQNSLMDAYGKCGCVEDAQTVFEEVRHKDVIS 188
           C  S+ L +G  +HG  VK+  C + P V  +L+D Y KCG +EDA+T+FE + H DVI 
Sbjct: 263 CLSSTVLGKG--IHGCSVKT-LCDTEPHVGGALLDMYAKCGDIEDARTIFEMIPHDDVIP 319

Query: 189 WNTIISCYGFS 221
           W+ +IS Y  S
Sbjct: 320 WSFMISRYAQS 330


>ref|XP_006660540.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Oryza brachyantha]
          Length = 745

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 34/70 (48%), Positives = 49/70 (70%)
 Frame = +3

Query: 3   NACAYSSCLRQGMALHGRMVKSGFCSSCPIVQNSLMDAYGKCGCVEDAQTVFEEVRHKDV 182
           + CA  + L  GM LHGR++K+G+   C  V N+L+  Y KCG +EDA+ VFEE+  +DV
Sbjct: 381 STCADIAALECGMQLHGRLIKAGYGVGC-FVGNALLAMYFKCGNMEDARNVFEEMEERDV 439

Query: 183 ISWNTIISCY 212
           +SWNT+I+ Y
Sbjct: 440 VSWNTMIAGY 449


>ref|NP_567948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|223635622|sp|O81767.2|PP348_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At4g33990; AltName: Full=Protein EMBRYO DEFECTIVE 2758
           gi|332660906|gb|AEE86306.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 823

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 33/71 (46%), Positives = 49/71 (69%)
 Frame = +3

Query: 6   ACAYSSCLRQGMALHGRMVKSGFCSSCPIVQNSLMDAYGKCGCVEDAQTVFEEVRHKDVI 185
           AC+ +  LRQGM LHGR++K+G      +V  SL D YGKCG +EDA ++F ++   + +
Sbjct: 460 ACSQAGALRQGMKLHGRLLKNGLYLDVFVV-TSLADMYGKCGRLEDALSLFYQIPRVNSV 518

Query: 186 SWNTIISCYGF 218
            WNT+I+C+GF
Sbjct: 519 PWNTLIACHGF 529


>emb|CAA19881.1| putative protein [Arabidopsis thaliana] gi|7270348|emb|CAB80116.1|
           putative protein [Arabidopsis thaliana]
          Length = 844

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 33/71 (46%), Positives = 49/71 (69%)
 Frame = +3

Query: 6   ACAYSSCLRQGMALHGRMVKSGFCSSCPIVQNSLMDAYGKCGCVEDAQTVFEEVRHKDVI 185
           AC+ +  LRQGM LHGR++K+G      +V  SL D YGKCG +EDA ++F ++   + +
Sbjct: 378 ACSQAGALRQGMKLHGRLLKNGLYLDVFVV-TSLADMYGKCGRLEDALSLFYQIPRVNSV 436

Query: 186 SWNTIISCYGF 218
            WNT+I+C+GF
Sbjct: 437 PWNTLIACHGF 447


>ref|XP_004978275.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Setaria italica]
          Length = 500

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 34/77 (44%), Positives = 49/77 (63%)
 Frame = +3

Query: 3   NACAYSSCLRQGMALHGRMVKSGFCSSCPIVQNSLMDAYGKCGCVEDAQTVFEEVRHKDV 182
           +AC   + L+QGM +H R+V  GF +   +V+NSL+D Y KCGCV+ A+ VF+    +D 
Sbjct: 231 DACGELALLKQGMQVHARVVGGGFEADV-VVRNSLLDMYAKCGCVDSAELVFKVASSRDA 289

Query: 183 ISWNTIISCYGFSARPQ 233
           + W T+IS YG   R Q
Sbjct: 290 VLWTTMISAYGKFGRVQ 306


>ref|NP_195434.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75097747|sp|O23169.1|PP353_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At4g37170 gi|2464864|emb|CAB16758.1| putative protein
           [Arabidopsis thaliana] gi|7270666|emb|CAB80383.1|
           putative protein [Arabidopsis thaliana]
           gi|332661361|gb|AEE86761.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 691

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 31/74 (41%), Positives = 52/74 (70%)
 Frame = +3

Query: 6   ACAYSSCLRQGMALHGRMVKSGFCSSCPIVQNSLMDAYGKCGCVEDAQTVFEEVRHKDVI 185
           A A   C+R+G  +HG +V++G  S   ++ +SLMD YGKCGC+++A+ +F+++  KDV+
Sbjct: 227 AAAAVKCIRRGKEIHGHIVRAGLDSD-EVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVV 285

Query: 186 SWNTIISCYGFSAR 227
           SW ++I  Y  S+R
Sbjct: 286 SWTSMIDRYFKSSR 299


>ref|XP_006580405.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like isoform X2 [Glycine max]
          Length = 718

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 30/70 (42%), Positives = 51/70 (72%)
 Frame = +3

Query: 3   NACAYSSCLRQGMALHGRMVKSGFCSSCPIVQNSLMDAYGKCGCVEDAQTVFEEVRHKDV 182
           +ACA  + L  G  +HG++V++G+   C +V N+L+  Y KCGC+++A  VF+ V+HKD+
Sbjct: 354 SACADIAALELGKQVHGQVVRTGYEKGC-LVGNALVGMYCKCGCIDEAYDVFQGVQHKDI 412

Query: 183 ISWNTIISCY 212
           +SWNT+++ Y
Sbjct: 413 VSWNTMLAGY 422


>ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like isoform X1 [Glycine max]
          Length = 750

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 30/70 (42%), Positives = 51/70 (72%)
 Frame = +3

Query: 3   NACAYSSCLRQGMALHGRMVKSGFCSSCPIVQNSLMDAYGKCGCVEDAQTVFEEVRHKDV 182
           +ACA  + L  G  +HG++V++G+   C +V N+L+  Y KCGC+++A  VF+ V+HKD+
Sbjct: 386 SACADIAALELGKQVHGQVVRTGYEKGC-LVGNALVGMYCKCGCIDEAYDVFQGVQHKDI 444

Query: 183 ISWNTIISCY 212
           +SWNT+++ Y
Sbjct: 445 VSWNTMLAGY 454


>ref|XP_002869013.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297314849|gb|EFH45272.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 693

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 31/74 (41%), Positives = 52/74 (70%)
 Frame = +3

Query: 6   ACAYSSCLRQGMALHGRMVKSGFCSSCPIVQNSLMDAYGKCGCVEDAQTVFEEVRHKDVI 185
           A A   C+R+G  +HG +V++G  S   ++ +SLMD YGKCGC+++A+ +F+++  KDV+
Sbjct: 229 AAAAIKCIRRGKEIHGHIVRAGLDSD-EVLWSSLMDMYGKCGCIDEARNIFDKIIDKDVV 287

Query: 186 SWNTIISCYGFSAR 227
           SW ++I  Y  S+R
Sbjct: 288 SWTSMIDRYFKSSR 301


>gb|ESW32505.1| hypothetical protein PHAVU_002G328000g [Phaseolus vulgaris]
          Length = 691

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 29/70 (41%), Positives = 51/70 (72%)
 Frame = +3

Query: 3   NACAYSSCLRQGMALHGRMVKSGFCSSCPIVQNSLMDAYGKCGCVEDAQTVFEEVRHKDV 182
           + CA+ + L  G  +HG++VK+G+ + C +V N+L+  Y KCGC+++A  VF+ ++ KD+
Sbjct: 327 STCAHIAALELGKQVHGQVVKTGYENGC-LVGNALVGMYCKCGCIDEAYEVFQGIQRKDI 385

Query: 183 ISWNTIISCY 212
           +SWNT++S Y
Sbjct: 386 VSWNTMLSGY 395